>HXA1_MOUSE (P09022) Homeobox protein Hox-A1 (Hox-1.6) (Homeotic protein|
           ERA-1-993) (Early retinoic acid 1) (Homeoboxless protein
           ERA-1-399)
          Length = 331

 Score = 28.9 bits (63), Expect = 4.2
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +1

Query: 76  HHYHHPRTRTYDT 114
           HH+HHP+T TY T
Sbjct: 66  HHHHHPQTATYQT 78


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,973,056
Number of Sequences: 219361
Number of extensions: 179728
Number of successful extensions: 500
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 489
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 500
length of database: 80,573,946
effective HSP length: 17
effective length of database: 76,844,809
effective search space used: 1844275416
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)