ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart42g12 |
|---|---|
| Clone Library Name | barley_pub |
>OPRL_LYCES (Q9FEX0) 12-oxophytodienoate reductase-like protein (EC 1.3.1.-)| (LeOPR2) Length = 355 Score = 129 bits (325), Expect = 1e-30 Identities = 59/85 (69%), Positives = 69/85 (81%) Frame = -3 Query: 406 VPKRLLPYREAFNGTFIANGGYDREEGGKVITEGYTDLVSFGRLFLANPDLPKRFEVGAE 227 V + LLP R+AF GT IA+GGY + +G K I E Y DL+SFGR+FLANPDLPKRFEV A Sbjct: 268 VNRSLLPIRKAFKGTLIASGGYGKSDGEKAIDENYADLISFGRMFLANPDLPKRFEVNAP 327 Query: 226 LNKYDRMPFYTSDPIVGYTDYPFLE 152 LNKY+R FYT+DPI+GYTDYPFLE Sbjct: 328 LNKYNRSTFYTNDPIIGYTDYPFLE 352
>OPR1_ARATH (Q8LAH7) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase 1) (AtOPR1) (FS-AT-I) Length = 372 Score = 127 bits (320), Expect = 5e-30 Identities = 57/84 (67%), Positives = 70/84 (83%) Frame = -3 Query: 403 PKRLLPYREAFNGTFIANGGYDREEGGKVITEGYTDLVSFGRLFLANPDLPKRFEVGAEL 224 P L+P R+AF GTFI+ GG+ RE+G + +++G TDLV++GR FLANPDLPKRF+V A L Sbjct: 286 PHTLMPMRKAFKGTFISAGGFTREDGNEAVSKGRTDLVAYGRWFLANPDLPKRFQVDAPL 345 Query: 223 NKYDRMPFYTSDPIVGYTDYPFLE 152 NKYDR FYTSDP+VGYTDYPFLE Sbjct: 346 NKYDRPTFYTSDPVVGYTDYPFLE 369
>OPR1_LYCES (Q9XG54) 12-oxophytodienoate reductase 1 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 1) (OPDA-reductase 1) (LeOPR1) Length = 376 Score = 123 bits (308), Expect = 1e-28 Identities = 55/81 (67%), Positives = 67/81 (82%) Frame = -3 Query: 394 LLPYREAFNGTFIANGGYDREEGGKVITEGYTDLVSFGRLFLANPDLPKRFEVGAELNKY 215 L+P R+A+ GTFI GGYDRE+G + + E DLV++GRLF++NPDLPKRFE+ A LNKY Sbjct: 293 LVPMRKAYKGTFIVAGGYDREDGNRALIEDRADLVAYGRLFISNPDLPKRFELNAPLNKY 352 Query: 214 DRMPFYTSDPIVGYTDYPFLE 152 +R FYTSDPIVGYTDYPFLE Sbjct: 353 NRDTFYTSDPIVGYTDYPFLE 373
>OPR2_ARATH (Q8GYB8) 12-oxophytodienoate reductase 2 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 2) (OPDA-reductase 2) (AtOPR2) Length = 374 Score = 121 bits (303), Expect = 5e-28 Identities = 54/81 (66%), Positives = 67/81 (82%) Frame = -3 Query: 394 LLPYREAFNGTFIANGGYDREEGGKVITEGYTDLVSFGRLFLANPDLPKRFEVGAELNKY 215 L+P REAF GTFI+ GG+ RE+G + + +G TDLV++GR FLANPDLPKRF++ A LNKY Sbjct: 291 LMPMREAFKGTFISAGGFTREDGNEAVAKGRTDLVAYGRWFLANPDLPKRFQLDAPLNKY 350 Query: 214 DRMPFYTSDPIVGYTDYPFLE 152 +R FYTSDP+VGYTDYP LE Sbjct: 351 NRSTFYTSDPVVGYTDYPSLE 371
>OPR3_ARATH (Q9FUP0) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (Delayed dehiscence 1) (AtOPR3) Length = 391 Score = 107 bits (268), Expect = 5e-24 Identities = 47/82 (57%), Positives = 64/82 (78%) Frame = -3 Query: 400 KRLLPYREAFNGTFIANGGYDREEGGKVITEGYTDLVSFGRLFLANPDLPKRFEVGAELN 221 K + R A+NGTF+++GG+++E G + + +G DLVS+GRLF+ANPDL RF++ ELN Sbjct: 304 KLMKSLRMAYNGTFMSSGGFNKELGMQAVQQGDADLVSYGRLFIANPDLVSRFKIDGELN 363 Query: 220 KYDRMPFYTSDPIVGYTDYPFL 155 KY+R FYT DP+VGYTDYPFL Sbjct: 364 KYNRKTFYTQDPVVGYTDYPFL 385
>OPR3_LYCES (Q9FEW9) 12-oxophytodienoate reductase 3 (EC 1.3.1.42)| (12-oxophytodienoate-10,11-reductase 3) (OPDA-reductase 3) (LeOPR3) Length = 396 Score = 104 bits (259), Expect = 6e-23 Identities = 46/77 (59%), Positives = 59/77 (76%) Frame = -3 Query: 382 REAFNGTFIANGGYDREEGGKVITEGYTDLVSFGRLFLANPDLPKRFEVGAELNKYDRMP 203 R A+ GTFI +GGY RE G + + +G DLVS+GRLF++NPDL R ++ A LNKY+R Sbjct: 309 RNAYQGTFICSGGYTRELGIEAVAQGDADLVSYGRLFISNPDLVMRIKLNAPLNKYNRKT 368 Query: 202 FYTSDPIVGYTDYPFLE 152 FYT DP+VGYTDYPFL+ Sbjct: 369 FYTQDPVVGYTDYPFLQ 385
>OPRL1_ARATH (Q8GYA3) Putative 12-oxophytodienoate reductase-like protein 1 (EC| 1.3.1.-) Length = 324 Score = 90.9 bits (224), Expect = 7e-19 Identities = 42/59 (71%), Positives = 47/59 (79%) Frame = -3 Query: 394 LLPYREAFNGTFIANGGYDREEGGKVITEGYTDLVSFGRLFLANPDLPKRFEVGAELNK 218 L P R AFNGTFI GGY RE+G K + EG TDLV++GRLFLANPDLPKRFE+ A LNK Sbjct: 266 LTPMRNAFNGTFIVAGGYTREDGNKAVAEGRTDLVAYGRLFLANPDLPKRFELNAPLNK 324
>OYEB_SCHPO (Q09671) Putative NADPH dehydrogenase C5H10.10 (EC 1.6.99.1) (Old| yellow enzyme homolog) Length = 392 Score = 71.2 bits (173), Expect = 5e-13 Identities = 37/81 (45%), Positives = 48/81 (59%) Frame = -3 Query: 400 KRLLPYREAFNGTFIANGGYDREEGGKVITEGYTDLVSFGRLFLANPDLPKRFEVGAELN 221 K L Y+ + FI GG+DR+ ++ + T LV+FGR FL+NPDLP R + LN Sbjct: 302 KNTLIYKNLWGDPFITAGGHDRDSAIQMAEQENT-LVAFGRYFLSNPDLPFRLKYNLPLN 360 Query: 220 KYDRMPFYTSDPIVGYTDYPF 158 K+DR FYT GY DYPF Sbjct: 361 KWDRATFYTKMSPKGYIDYPF 381
>OYEA_SCHPO (Q09670) Putative NADPH dehydrogenase C5H10.04 (EC 1.6.99.1) (Old| yellow enzyme homolog) Length = 382 Score = 63.2 bits (152), Expect = 1e-10 Identities = 35/72 (48%), Positives = 41/72 (56%) Frame = -3 Query: 373 FNGTFIANGGYDREEGGKVITEGYTDLVSFGRLFLANPDLPKRFEVGAELNKYDRMPFYT 194 + G FI GGYD E + E LV+FGR F+ANPDL R + LNK+DR FY Sbjct: 304 WKGPFITAGGYDPETAVQAANERGV-LVAFGRNFIANPDLVFRIKHHIPLNKWDRSSFYL 362 Query: 193 SDPIVGYTDYPF 158 GYTDYPF Sbjct: 363 PKTEKGYTDYPF 374
>OYE3_YEAST (P41816) NADPH dehydrogenase 3 (EC 1.6.99.1) (Old yellow enzyme 3)| Length = 399 Score = 57.0 bits (136), Expect = 1e-08 Identities = 34/77 (44%), Positives = 41/77 (53%), Gaps = 3/77 (3%) Frame = -3 Query: 373 FNGTFIANGGYDREEGGKVITEGYTD---LVSFGRLFLANPDLPKRFEVGAELNKYDRMP 203 + G I G Y +V+ E D L+ +GR F++NPDL R E G LNKYDR Sbjct: 316 WKGPIIRAGNYALHP--EVVREQVKDPRTLIGYGRFFISNPDLVYRLEEGLPLNKYDRST 373 Query: 202 FYTSDPIVGYTDYPFLE 152 FYT GYTDYP E Sbjct: 374 FYTMS-AEGYTDYPTYE 389
>NEMA_ECOLI (P77258) N-ethylmaleimide reductase (EC 1.-.-.-) (N-ethylmaleimide| reducing enzyme) Length = 365 Score = 56.6 bits (135), Expect = 1e-08 Identities = 33/76 (43%), Positives = 41/76 (53%) Frame = -3 Query: 382 REAFNGTFIANGGYDREEGGKVITEGYTDLVSFGRLFLANPDLPKRFEVGAELNKYDRMP 203 R F+G I G Y E+ +I +G D V+FGR ++ANPDL R + AELN Sbjct: 291 RARFHGPIIGAGAYTVEKAETLIGKGLIDAVAFGRDWIANPDLVARLQRKAELNPQRAES 350 Query: 202 FYTSDPIVGYTDYPFL 155 FY GYTDYP L Sbjct: 351 FY-GGGAEGYTDYPTL 365
>KYE1_KLULA (P40952) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)| Length = 398 Score = 51.6 bits (122), Expect = 4e-07 Identities = 25/48 (52%), Positives = 30/48 (62%) Frame = -3 Query: 295 LVSFGRLFLANPDLPKRFEVGAELNKYDRMPFYTSDPIVGYTDYPFLE 152 L+ +GR F+ANPDL +R E G LN+YDR FY GY DYP E Sbjct: 343 LIGYGRAFIANPDLVERLEKGLPLNQYDRPSFYKMS-AEGYIDYPTYE 389
>OYE2_YEAST (Q03558) NADPH dehydrogenase 2 (EC 1.6.99.1) (Old yellow enzyme 2)| Length = 399 Score = 51.2 bits (121), Expect = 6e-07 Identities = 25/48 (52%), Positives = 29/48 (60%) Frame = -3 Query: 295 LVSFGRLFLANPDLPKRFEVGAELNKYDRMPFYTSDPIVGYTDYPFLE 152 L+ +GR F++NPDL R E G LNKYDR FY GY DYP E Sbjct: 343 LIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFYKMS-AEGYIDYPTYE 389
>OYE1_SACPS (Q02899) NADPH dehydrogenase 1 (EC 1.6.99.1) (Old yellow enzyme 1)| Length = 399 Score = 50.8 bits (120), Expect = 7e-07 Identities = 25/48 (52%), Positives = 29/48 (60%) Frame = -3 Query: 295 LVSFGRLFLANPDLPKRFEVGAELNKYDRMPFYTSDPIVGYTDYPFLE 152 L+ +GR F++NPDL R E G LNKYDR FY GY DYP E Sbjct: 343 LIGYGRFFISNPDLVDRLEKGLPLNKYDRDTFYQMS-AHGYIDYPTYE 389
>EBP1_CANAL (P43084) Probable NADPH dehydrogenase (EC 1.6.99.1)| (Estrogen-binding protein) (EBP) Length = 406 Score = 40.8 bits (94), Expect = 8e-04 Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 4/63 (6%) Frame = -3 Query: 373 FNGTFIANGGY--DREEGGKVITEGYTD--LVSFGRLFLANPDLPKRFEVGAELNKYDRM 206 + G FI G Y D E +I + D ++ F R F +NPDL ++ ++G LN Y+R Sbjct: 321 WKGNFIRAGNYTYDAPEFKTLINDLKNDRSIIGFSRFFTSNPDLVEKLKLGKPLNYYNRE 380 Query: 205 PFY 197 FY Sbjct: 381 EFY 383
>BRO1_CANGA (Q6FJG8) Vacuolar protein-sorting protein BRO1 (BRO| domain-containing protein 1) Length = 888 Score = 34.3 bits (77), Expect = 0.072 Identities = 22/63 (34%), Positives = 30/63 (47%) Frame = +3 Query: 183 MGSEV*KGILSYLFSSAPTSNRFGRSGFARNSRPKDTRSVYPSVITLPPSSRSYPPLAMK 362 +GS + S S PT RF + A NSRP + Y S ++PP+ PP + Sbjct: 736 VGSSIDSQFQSMNLGSVPTPQRFPQPP-APNSRPIVSMENYTSQFSVPPAHGDLPPAYNQ 794 Query: 363 VPL 371 VPL Sbjct: 795 VPL 797
>HYUA_PSESN (Q01262) Hydantoin utilization protein A (ORF2)| Length = 690 Score = 32.0 bits (71), Expect = 0.36 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 3/58 (5%) Frame = -3 Query: 373 FNGTFIANGG---YDREEGGKVITEGYTDLVSFGRLFLANPDLPKRFEVGAELNKYDR 209 F+GT IA YD + G + TEGY D++ GR P+ + + E+ DR Sbjct: 63 FHGTTIATNAILEYDGAKTGMITTEGYRDIIHIGR-----HQRPQNYSIMQEIPWQDR 115
>DHTM_METME (P16099) Trimethylamine dehydrogenase (EC 1.5.8.2) (TMADh)| Length = 729 Score = 32.0 bits (71), Expect = 0.36 Identities = 13/36 (36%), Positives = 24/36 (66%) Frame = -3 Query: 340 DREEGGKVITEGYTDLVSFGRLFLANPDLPKRFEVG 233 D E+ +++T+GY D++ R +A+P LP++ E G Sbjct: 302 DPEKMIEIVTKGYADIIGCARPSIADPFLPQKVEQG 337
>NADO_THEBR (P32382) NADH oxidase (EC 1.-.-.-)| Length = 651 Score = 31.6 bits (70), Expect = 0.47 Identities = 13/32 (40%), Positives = 21/32 (65%) Frame = -3 Query: 322 KVITEGYTDLVSFGRLFLANPDLPKRFEVGAE 227 K+I EG D V+ GR +A+P+ PK+ + G + Sbjct: 307 KIIAEGRADFVAVGRGLIADPEWPKKAKEGRQ 338
>MUC2L_RAT (P98089) Intestinal mucin-like protein (MLP) (Fragment)| Length = 837 Score = 30.8 bits (68), Expect = 0.80 Identities = 12/19 (63%), Positives = 14/19 (73%) Frame = -1 Query: 207 CPSTPRTPSLDTPITPSSN 151 CPSTP TP TP TP+S+ Sbjct: 16 CPSTPSTPPPSTPTTPTSS 34
>JHD2C_HUMAN (Q15652) Probable JmjC domain-containing histone demethylation| protein 2C (EC 1.14.11.-) (Jumonji domain-containing protein 1C) (Thyroid receptor-interacting protein 8) (TRIP-8) Length = 2540 Score = 29.6 bits (65), Expect = 1.8 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = -2 Query: 320 GDHRGIHRPSVLWTTIPGKPRPAKAV*GWRRAEQVR*DALLHL 192 G H +H P +L T +PG P A + G R E +L HL Sbjct: 785 GPHHAVHHPHLLPTVLPGVP-TASLLGGHPRLESAHASSLSHL 826
>IL29_HUMAN (Q8IU54) Interleukin-29 precursor (IL-29) (Interferon lambda-1)| (IFN-lambda-1) (Cytokine ZCYTO21) Length = 200 Score = 29.6 bits (65), Expect = 1.8 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 1/38 (2%) Frame = +1 Query: 292 LGRCI-PR*SPCPLPRGRTHHWL*RYH*RPPCTAATAL 402 L CI P+ + P PRGR HHWL R P +A L Sbjct: 128 LQACIQPQPTAGPRPRGRLHHWLHRLQEAPKKESAGCL 165
>JHD2C_MOUSE (Q69ZK6) Probable JmjC domain-containing histone demethylation| protein 2C (EC 1.14.11.-) (Jumonji domain-containing protein 1C) Length = 2350 Score = 28.9 bits (63), Expect = 3.0 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = -2 Query: 320 GDHRGIHRPSVLWTTIPGKPRPAKAV*GWRRAEQVR*DALLHL 192 G H +H P +L T +PG P A + G R E +L HL Sbjct: 604 GPHHPVHHPHLLPTVLPGVP-TASLLGGHPRLESAHASSLSHL 645
>BAIC_EUBSP (P19410) Bile acid-inducible operon protein C| Length = 540 Score = 28.9 bits (63), Expect = 3.0 Identities = 16/36 (44%), Positives = 19/36 (52%) Frame = -3 Query: 334 EEGGKVITEGYTDLVSFGRLFLANPDLPKRFEVGAE 227 E KVI EG DLV GR LA+P+ + G E Sbjct: 291 EMANKVIEEGKFDLVGIGRAQLADPNWITKVREGKE 326
>VPS72_YEAST (Q03388) Vacuolar protein sorting protein 72 (SWR complex protein| 2) Length = 795 Score = 28.5 bits (62), Expect = 4.0 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 11/66 (16%) Frame = +3 Query: 216 YLFSSAP------TSNRFG-----RSGFARNSRPKDTRSVYPSVITLPPSSRSYPPLAMK 362 Y F +AP +N FG +G + RP+D ++V+ S++ PP S S P + Sbjct: 597 YDFPNAPPNLKDFNTNLFGDRWSYTNGLSATQRPQDMKTVFHSILPSPPQS-SVPSPTVD 655 Query: 363 VPLKAS 380 + L S Sbjct: 656 ISLDLS 661
>POLG_HCVJK (Q68801) Genome polyprotein [Contains: Core protein p21 (Capsid| protein C) (p21); Core protein p19; Envelope glycoprotein E1 (gp32) (gp35); Envelope glycoprotein E2 (NS1) (gp68) (gp70); p7; Protease NS2-3 (EC 3.4.22.-) (p23); Serine protease/N Length = 3018 Score = 28.1 bits (61), Expect = 5.2 Identities = 11/27 (40%), Positives = 16/27 (59%) Frame = -3 Query: 133 LPSTIAGRNETYVEEPHREGRGVLRFI 53 +P+TI +NE + PH+ GR R I Sbjct: 2561 IPTTIMAKNEVFAVAPHKGGRKPARLI 2587
>UR2R_MACMU (Q8HYC3) Urotensin II receptor (UR-II-R)| Length = 389 Score = 28.1 bits (61), Expect = 5.2 Identities = 20/66 (30%), Positives = 28/66 (42%) Frame = +1 Query: 145 MIIRGRGNRCIQRWGPRCRRASYRTCSALRQPQTALAGLGLPGIVVQRTLGRCIPR*SPC 324 ++ RG + C+ WGPR RA A T++AG GL ++ L R R Sbjct: 190 LVRRGPKSLCLPAWGPRAHRAYLTLLFA-----TSIAGPGLLIGLLYARLARAYRRSQRA 244 Query: 325 PLPRGR 342 R R Sbjct: 245 SFKRAR 250
>UR2R_HUMAN (Q9UKP6) Urotensin II receptor (UR-II-R) (G-protein coupled| receptor 14) Length = 389 Score = 28.1 bits (61), Expect = 5.2 Identities = 20/66 (30%), Positives = 28/66 (42%) Frame = +1 Query: 145 MIIRGRGNRCIQRWGPRCRRASYRTCSALRQPQTALAGLGLPGIVVQRTLGRCIPR*SPC 324 ++ RG + C+ WGPR RA A T++AG GL ++ L R R Sbjct: 190 LVRRGPKSLCLPAWGPRAHRAYLTLLFA-----TSIAGPGLLIGLLYARLARAYRRSQRA 244 Query: 325 PLPRGR 342 R R Sbjct: 245 SFKRAR 250
>NAC9_ARATH (Q9ZVH0) Putative NAC domain-containing protein 9 (ANAC009)| Length = 418 Score = 28.1 bits (61), Expect = 5.2 Identities = 10/41 (24%), Positives = 22/41 (53%) Frame = -1 Query: 204 PSTPRTPSLDTPITPSSNDHICRFFLRLSQVVMKRMLKNLI 82 PS P D+P++P+ + ICR F + + ++ + + + Sbjct: 149 PSPPSKRFFDSPVSPNDSWAICRIFKKTNTTTLRALSHSFV 189
>IGHA1_HUMAN (P01876) Ig alpha-1 chain C region| Length = 353 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/22 (63%), Positives = 15/22 (68%), Gaps = 2/22 (9%) Frame = -1 Query: 216 TIGCP--STPRTPSLDTPITPS 157 T+ CP STP TPS TP TPS Sbjct: 98 TVPCPVPSTPPTPSPSTPPTPS 119
>IGHA1_GORGO (P20758) Ig alpha-1 chain C region| Length = 353 Score = 28.1 bits (61), Expect = 5.2 Identities = 14/22 (63%), Positives = 15/22 (68%), Gaps = 2/22 (9%) Frame = -1 Query: 216 TIGC--PSTPRTPSLDTPITPS 157 T+ C PSTP TPS TP TPS Sbjct: 98 TVPCRVPSTPPTPSPSTPPTPS 119
>Y665_HAEIN (P44033) Hypothetical protein HI0665| Length = 343 Score = 28.1 bits (61), Expect = 5.2 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 9/45 (20%) Frame = -3 Query: 388 PYREAFNGTFIANGGYDREEGGKVITEGYT---------DLVSFG 281 PY E FN T +A REEG + +G+ D V FG Sbjct: 238 PYPEIFNSTLLALPLLAREEGNATLAKGFNTQYGEYIGDDFVEFG 282
>DUSA_PSEPK (Q88KX0) tRNA-dihydrouridine synthase A (EC 1.-.-.-)| Length = 336 Score = 28.1 bits (61), Expect = 5.2 Identities = 23/73 (31%), Positives = 34/73 (46%), Gaps = 6/73 (8%) Frame = -1 Query: 201 STPRT----PSLDTPITPSSN--DHICRFFLRLSQVVMKRMLKNLIERAGVSYGSLKRKE 40 STP T PS + P + D CRFFLRL + L+ V+ G+L + Sbjct: 7 STPHTTRPEPSRRFSVAPMMDWTDRHCRFFLRLLS------RQTLLYTEMVTTGALLHND 60 Query: 39 VVQFIRKNISKTP 1 +F+R + S+ P Sbjct: 61 AHRFLRHDASEHP 73
>ZDHC1_HUMAN (Q8WTX9) Probable palmitoyltransferase ZDHHC1 (EC 2.3.1.-) (Zinc| finger DHHC domain-containing protein 1) (DHHC-1) (Zinc finger protein 377) (DHHC-domain-containing cysteine-rich protein 1) Length = 485 Score = 28.1 bits (61), Expect = 5.2 Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 13/70 (18%) Frame = +1 Query: 184 WGPR-----CR---RASYRTCSALRQPQTALAGLGLPGIV-----VQRTLGRCIPR*SPC 324 WGP+ CR R + C LR P+ GLG P + RT C P P Sbjct: 380 WGPQAPPCLCRKRGRGACIKCERLR-PRIRRRGLGPPAAAPARRRIPRTPALCTPLALPA 438 Query: 325 PLPRGRTHHW 354 P R R W Sbjct: 439 PTTRRRQSPW 448
>GLNB2_METMP (P71525) Nitrogen fixation nifHD region glnB-like protein 2| Length = 121 Score = 28.1 bits (61), Expect = 5.2 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +1 Query: 223 SALRQPQTALAGLGLPGIVVQRTLGR 300 S + Q +T L GLG P + R LGR Sbjct: 11 SKMAQTKTVLEGLGFPAMTANRVLGR 36
>DHDM_HYPSX (Q48303) Dimethylamine dehydrogenase (EC 1.5.8.1) (DMADh)| Length = 735 Score = 28.1 bits (61), Expect = 5.2 Identities = 13/37 (35%), Positives = 22/37 (59%) Frame = -3 Query: 343 YDREEGGKVITEGYTDLVSFGRLFLANPDLPKRFEVG 233 YD E+ +VI G D++ R +A+P LP++ + G Sbjct: 307 YDPEKMLQVIKAGIIDIIGAARPSIADPWLPRKIDEG 343
>DPO3A_CHLTR (O84549) DNA polymerase III alpha subunit (EC 2.7.7.7)| Length = 1237 Score = 27.7 bits (60), Expect = 6.8 Identities = 11/25 (44%), Positives = 16/25 (64%) Frame = +2 Query: 314 DHLAPFLAVVPTIGYEGTIEGLPVR 388 +H+ PFL+VVP +EG G +R Sbjct: 1009 EHMLPFLSVVPARDFEGLPHGTIIR 1033
>Y1066_METJA (Q58466) Hypothetical protein MJ1066| Length = 386 Score = 27.7 bits (60), Expect = 6.8 Identities = 10/18 (55%), Positives = 13/18 (72%) Frame = +1 Query: 64 GHPCPLDEVLQHTFHYDL 117 GHPC +DE+L+ YDL Sbjct: 134 GHPCEMDEILKIARDYDL 151
>YFI6_YEAST (P43597) Hypothetical 137.7 kDa protein in UGS1-FAB1 intergenic| region Length = 1233 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = -3 Query: 340 DREEGGKVITEGYTDLVSFGRLFLANPDLPKRFEVGAELNK 218 D EE +V T+ + + L N D PK EV AELNK Sbjct: 860 DTEEDAEVENSEKTEFIKV-KAELGNLDAPKEAEVTAELNK 899 Score = 27.3 bits (59), Expect = 8.9 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = -3 Query: 340 DREEGGKVITEGYTDLVSFGRLFLANPDLPKRFEVGAELNK 218 D EE +V T+ + + L N D PK EV AELNK Sbjct: 813 DTEEDAEVENSEKTEFIKV-KAELENLDAPKEAEVTAELNK 852
>CDPK2_ORYSA (P53683) Calcium-dependent protein kinase, isoform 2 (EC 2.7.11.1)| (CDPK 2) Length = 533 Score = 27.7 bits (60), Expect = 6.8 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%) Frame = +3 Query: 225 SSAPTSNRFGRSGF--ARNSRPKDTRSVYPSVITLPPSSRSYPPLAMKVPL 371 +++P S R G +G+ + ++P T Y PP+ Y P AM P+ Sbjct: 8 ATSPDSGRGGANGYGYSHQTKPAQTTPSYNHPQPPPPAEVRYTPSAMNPPV 58
>RPA1_DROME (P91875) DNA-directed RNA polymerase I largest subunit (EC 2.7.7.6)| Length = 1642 Score = 27.7 bits (60), Expect = 6.8 Identities = 17/48 (35%), Positives = 23/48 (47%) Frame = -1 Query: 201 STPRTPSLDTPITPSSNDHICRFFLRLSQVVMKRMLKNLIERAGVSYG 58 S +TPS+D PI P + + L+ V L NL+E VS G Sbjct: 1224 SNIKTPSMDIPIKPGQQHQAEKLRINLNSVT----LANLLEYVHVSTG 1267
>ZN382_HUMAN (Q96SR6) Zinc finger protein 382 (KRAB/Zinc finger suppressor| protein 1) (KS1) Length = 548 Score = 27.3 bits (59), Expect = 8.9 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 8/60 (13%) Frame = -3 Query: 319 VITEGYTDLVSFGRLFLANPDLPKRFEVGAELNKYDRMPFY--------TSDPIVGYTDY 164 V+ E Y VS G +A PD+ ++ E G EL P Y T D +V + +Y Sbjct: 35 VMLENYCHFVSVG-FHMAKPDMIRKLEQGEELWTQRIFPSYSYLEEDGKTEDVLVKFKEY 93
>Y3815_MYCBO (P0A5H2) Hypothetical protein Mb3815c precursor| Length = 407 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -2 Query: 341 RPRGRGQGDHRGIHRPSVLWTTIPGKP 261 R GRG G H G P V + T PG P Sbjct: 262 RAIGRGYGPHAGGFHPGVDFATDPGTP 288
>Y3786_MYCTU (P0A5H1) Hypothetical protein Rv3786c/MT3894 precursor| Length = 407 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/27 (48%), Positives = 14/27 (51%) Frame = -2 Query: 341 RPRGRGQGDHRGIHRPSVLWTTIPGKP 261 R GRG G H G P V + T PG P Sbjct: 262 RAIGRGYGPHAGGFHPGVDFATDPGTP 288
>NAMA_BACHK (Q6HJU1) NADPH dehydrogenase (EC 1.6.99.1) (Xenobiotic reductase)| Length = 345 Score = 27.3 bits (59), Expect = 8.9 Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 5/45 (11%) Frame = -3 Query: 322 KVITEGYTDLVSFGRLFLANPDLPK--RFEVGAELN---KYDRMP 203 +++T DL+ GR L NP P+ E+G EL +Y+R P Sbjct: 294 QILTNNEADLIFIGRELLRNPYFPRIAANELGFELEEPYQYERAP 338
>SOS2_MOUSE (Q02384) Son of sevenless homolog 2 (SOS-2) (mSOS-2) (Fragment)| Length = 1297 Score = 27.3 bits (59), Expect = 8.9 Identities = 12/25 (48%), Positives = 17/25 (68%) Frame = -1 Query: 219 STIGCPSTPRTPSLDTPITPSSNDH 145 ST+ P++P TPS TP +S+DH Sbjct: 1043 STVSAPTSPNTPS--TPPVSASSDH 1065
>FAS_RAT (P12785) Fatty acid synthase (EC 2.3.1.85) [Includes:| [Acyl-carrier-protein] S-acetyltransferase (EC 2.3.1.38); [Acyl-carrier-protein] S-malonyltransferase (EC 2.3.1.39); 3-oxoacyl-[acyl-carrier-protein] synthase (EC 2.3.1.41); 3-oxoacyl-[acyl-ca Length = 2505 Score = 27.3 bits (59), Expect = 8.9 Identities = 15/41 (36%), Positives = 25/41 (60%) Frame = +2 Query: 188 VRGVEGHPIVLVQLCANLKPLWQVWVCQE*SSKGH*VGVSL 310 V GVEGH + Q+ A+ +PLW ++C ++ +G+SL Sbjct: 472 VLGVEGHVQEVQQVPASQRPLW--FICSGMGTQWRGMGLSL 510
>EGR1_BRARE (P26632) Early growth response protein 1 (EGR-1) (Krox24)| Length = 511 Score = 27.3 bits (59), Expect = 8.9 Identities = 13/35 (37%), Positives = 17/35 (48%) Frame = +3 Query: 264 FARNSRPKDTRSVYPSVITLPPSSRSYPPLAMKVP 368 FA + +D +SVY S + P R YP K P Sbjct: 271 FATQTGSQDLKSVYQSQLIKPSRMRKYPNRPSKTP 305 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 71,351,782 Number of Sequences: 219361 Number of extensions: 1679827 Number of successful extensions: 4819 Number of sequences better than 10.0: 48 Number of HSP's better than 10.0 without gapping: 4626 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4815 length of database: 80,573,946 effective HSP length: 111 effective length of database: 56,224,875 effective search space used: 1349397000 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
