ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart42g08 |
|---|---|
| Clone Library Name | barley_pub |
>PPZ_SCHPO (P78968) Serine/threonine-protein phosphatase PP-Z (EC 3.1.3.16)| Length = 515 Score = 35.0 bits (79), Expect = 0.15 Identities = 26/102 (25%), Positives = 44/102 (43%) Frame = +1 Query: 199 NQGMATTLPL*QPSTRKPGSGALMHHHNQT*HASSHGVKPSYSASLTSVISMSSGALLSG 378 +Q + P QP+ P + A HHH+ + +SS+ V P+ S TS + S + Sbjct: 96 SQSPTSPHPSNQPAMLSPSTAASQHHHHHS-SSSSYAVSPTSPTSPTSSGPIGSNFDSAS 154 Query: 379 THSGSTVSAPPSGCSSDPSSLFRSGFPSSIFGILSPKRNEIL 504 H+G G P+S S P ++S +E++ Sbjct: 155 EHNGPVYPQDQQGPVIIPNSAISSTDPDDPETVVSLNVDEMI 196
>TROP_HUMAN (Q12816) Trophinin (MAGE-D3 antigen)| Length = 1387 Score = 34.7 bits (78), Expect = 0.20 Identities = 21/57 (36%), Positives = 31/57 (54%) Frame = +1 Query: 307 GVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDPSSLFRSGFPSSIFGI 477 GV PS SAS ++ S+S G LS + S S+ ++ GC+ S+ F S S G+ Sbjct: 716 GVAPSTSASFSNTASISFGGTLSTSSSFSSAASISFGCAHSTSTSFSSEASISFGGM 772
>PRY3_YEAST (P47033) Protein PRY3 (Pathogen related in Sc 3)| Length = 881 Score = 33.9 bits (76), Expect = 0.33 Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 9/92 (9%) Frame = +1 Query: 295 ASSHGVKPSYSASLTSVISM---------SSGALLSGTHSGSTVSAPPSGCSSDPSSLFR 447 ASS V SY+ S ++V+S SS A S T S S+ + SSDP+S Sbjct: 246 ASSSSVTTSYATSSSTVVSSDATSSTTTTSSVATSSSTTSSDPTSSTAAASSSDPASSSA 305 Query: 448 SGFPSSIFGILSPKRNEILSSSSLPSMGVTMT 543 + S+ + + I SSSS+ S ++ T Sbjct: 306 AASSSASTENAASSSSAISSSSSMVSAPLSST 337
>SP96_DICDI (P14328) Spore coat protein SP96| Length = 600 Score = 33.9 bits (76), Expect = 0.33 Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 1/107 (0%) Frame = +1 Query: 208 MATTLPL*QPSTRKPGSGALMHHHNQT*HASSHGVKPSYSASLTSVISMSSGALLSGTHS 387 +A +LP +T + + +++ + S V S S S + S SS A S S Sbjct: 412 VAVSLPRPTTTTGSTSDSSALGSTSESSASGSSAVSSSASGSSAASSSPSSSAASSSPSS 471 Query: 388 GSTVSAPPSG-CSSDPSSLFRSGFPSSIFGILSPKRNEILSSSSLPS 525 + S+P S SS PSS S S S + SSSS PS Sbjct: 472 SAASSSPSSSAASSSPSSSASSSSSPSSSASSSSAPSSSASSSSAPS 518 Score = 29.6 bits (65), Expect = 6.3 Identities = 24/77 (31%), Positives = 37/77 (48%) Frame = +1 Query: 295 ASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDPSSLFRSGFPSSIFG 474 +S+ PS SA+ +S S ++ + S + + S+ S+ S SS SS S PSS Sbjct: 453 SSAASSSPSSSAASSSPSSSAASSSPSSSAASSSPSSSASSSSSPSSSASSSSAPSSSAS 512 Query: 475 ILSPKRNEILSSSSLPS 525 S + SSS+ S Sbjct: 513 SSSAPSSSASSSSASSS 529 Score = 29.3 bits (64), Expect = 8.2 Identities = 24/76 (31%), Positives = 38/76 (50%) Frame = +1 Query: 211 ATTLPL*QPSTRKPGSGALMHHHNQT*HASSHGVKPSYSASLTSVISMSSGALLSGTHSG 390 A++ P ++ P S A + + +SS PS SAS +S S S+ + + + S Sbjct: 456 ASSSPSSSAASSSPSSSAASSSPSSSAASSS----PSSSASSSSSPSSSASSSSAPSSSA 511 Query: 391 STVSAPPSGCSSDPSS 438 S+ SAP S SS +S Sbjct: 512 SSSSAPSSSASSSSAS 527
>Y129_CHLPN (Q9JRX2) Hypothetical protein| CPn_0129/CPn_0130/CP0642/CPj0130/CpB0131 Length = 394 Score = 33.5 bits (75), Expect = 0.44 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 3/80 (3%) Frame = +1 Query: 331 SLTSVISMSSG-ALLSGTHSGSTVSAPPSGCSSDPSSLFRSGFPSSIFGILSPKRNEILS 507 SL S+I +S+G +LL GT +V P S+F PS +L+P +N+I S Sbjct: 62 SLISIIVLSTGISLLIGTQCSKSVQKD----EQKPKSIFPKETPSLDPWLLNPLKNKIQS 117 Query: 508 SSS--LPSMGVTMTHRLVFP 561 S + L + + + L FP Sbjct: 118 SETLLLDPTSINLKNELFFP 137
>CLUS_RAT (P05371) Clusterin precursor (Sulfated glycoprotein 2) (SGP-2)| (Dimeric acid glycoprotein) (DAG) (Testosterone repressed prostate message 2) (TRPM-2) [Contains: Clusterin beta chain; Clusterin alpha chain] Length = 447 Score = 32.3 bits (72), Expect = 0.97 Identities = 37/138 (26%), Positives = 54/138 (39%), Gaps = 10/138 (7%) Frame = -2 Query: 550 ICASWSLPWMGGSCLKGSHFVSGSKSQKSTMGSPT*RVMMDQTSSLMVAPRRLIQNACLR 371 +C + L W G L F + ST GS + IQNA Sbjct: 6 LCVALLLTWDNGMVLGEQEFSDNELQELSTQGSRY--------------VNKEIQNAVQG 51 Query: 370 AKHQKTWISQTS---RTLSSSV*HHARKHVMSGYDDA--SEPRYLAY-----ELMVAIVG 221 KH KT I +T+ ++L +S+ A+K DD SE + A+ E M+A+ Sbjct: 52 VKHIKTLIEKTNAERKSLLNSL-EEAKKKKEGALDDTRDSEMKLKAFPEVCNETMMALWE 110 Query: 220 ELLPFLGSSCSNSILFLC 167 E P L +C +C Sbjct: 111 ECKPCLKHTCMKFYARVC 128
>CDSN_PANTR (Q7YR44) Corneodesmosin precursor (S protein)| Length = 529 Score = 32.3 bits (72), Expect = 0.97 Identities = 36/111 (32%), Positives = 55/111 (49%), Gaps = 8/111 (7%) Frame = +1 Query: 247 KPGSGALMHHHNQT*HASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSS 426 KPG+G ++Q ++S G ++ + + S SS + SG+HSGS+ S S S Sbjct: 107 KPGTG-----YSQVSYSSGSGSSLQGASGSSQLGSSSSHSGSSGSHSGSSSSHSSSSSSF 161 Query: 427 D-PSSLFRSGFPS-------SIFGILSPKRNEILSSSSLPSMGVTMTHRLV 555 SS F+ G S S GIL+P + SSSS + GV+ + + V Sbjct: 162 QFSSSSFQVGNGSALPTNDNSYRGILNPSQPG-QSSSSSQTFGVSSSGQSV 211
>CDSN_HUMAN (Q15517) Corneodesmosin precursor (S protein)| Length = 529 Score = 32.3 bits (72), Expect = 0.97 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 8/101 (7%) Frame = +1 Query: 247 KPGSGALMHHHNQT*HASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSS 426 KPG+G ++Q ++S G ++ + + S SS + SG+HSGS+ S S S Sbjct: 107 KPGTG-----YSQVSYSSGSGSSLQGASGSSQLGSSSSHSGSSGSHSGSSSSHSSSSSSF 161 Query: 427 D-PSSLFRSGFPS-------SIFGILSPKRNEILSSSSLPS 525 SS F+ G S S GIL+P + SSSS S Sbjct: 162 QFSSSSFQVGNGSALPTNDNSYRGILNPSQPGQSSSSSQTS 202
>DCOR_DATST (P50134) Ornithine decarboxylase (EC 4.1.1.17) (ODC)| Length = 431 Score = 32.3 bits (72), Expect = 0.97 Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 3/70 (4%) Frame = +1 Query: 361 GALLSGTHSGSTVSAPPSGCSSDPSSLFRSG---FPSSIFGILSPKRNEILSSSSLPSMG 531 G++ + +TV+A P C S+ S+L G FPS++FG + +L LP + Sbjct: 333 GSMNCVLYDHATVNATPLACMSNRSNLNCGGSKTFPSTVFGPTCDALDTVLRDYQLPELQ 392 Query: 532 VTMTHRLVFP 561 V L+FP Sbjct: 393 V--NDWLIFP 400
>YL61_SCHPO (Q8TFG9) Hypothetical serine/threonine-rich protein PB15E9.01c| precursor Length = 943 Score = 32.0 bits (71), Expect = 1.3 Identities = 27/82 (32%), Positives = 35/82 (42%) Frame = +1 Query: 298 SSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDPSSLFRSGFPSSIFGI 477 +S + SAS TS SS A S S ST S+ + S SSL S SS Sbjct: 92 ASSSTNSTTSASPTSSSLTSSSATSSSLASSSTTSSSLASSSITSSSLASSSITSSSLAS 151 Query: 478 LSPKRNEILSSSSLPSMGVTMT 543 S + + SSS+ + T T Sbjct: 152 SSTTSSSLASSSTNSTTSATPT 173
>YEN1_SCHPO (O13695) Hypothetical serine-rich protein C11G7.01 in chromosome I| Length = 536 Score = 31.6 bits (70), Expect = 1.7 Identities = 30/76 (39%), Positives = 37/76 (48%), Gaps = 2/76 (2%) Frame = +1 Query: 295 ASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDP--SSLFRSGFPSSI 468 ASS S S S +SVI SS ++L S S+ +A S SS P SS F S SS Sbjct: 24 ASSSSAAASTSLSSSSVIPSSSSSML----SSSSATAISSSSSSSPLSSSSFTSPASSSF 79 Query: 469 FGILSPKRNEILSSSS 516 L ++ SSSS Sbjct: 80 ITSLVSSSSQQSSSSS 95 Score = 29.3 bits (64), Expect = 8.2 Identities = 30/77 (38%), Positives = 38/77 (49%) Frame = +1 Query: 295 ASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDPSSLFRSGFPSSIFG 474 +SS S SASLTS SS L S + + T S+ SS SSL S SS G Sbjct: 85 SSSSQQSSSSSASLTS---SSSATLTSSSSASPTSSSSSHALSSSSSSLVAS---SSSSG 138 Query: 475 ILSPKRNEILSSSSLPS 525 + S + + SSS+PS Sbjct: 139 MSS---SSLSHSSSVPS 152
>NP1L3_HUMAN (Q99457) Nucleosome assembly protein 1-like 3| Length = 506 Score = 31.6 bits (70), Expect = 1.7 Identities = 19/50 (38%), Positives = 27/50 (54%) Frame = +1 Query: 298 SSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDPSSLFR 447 S G + S+S +S SS + SG+ SGS S+ SG +S S L+R Sbjct: 27 SDSGEESDSSSSSSSTSDSSSSSSTSGSSSGSGSSSSSSGSTSSRSRLYR 76
>TENS1_HUMAN (Q9HBL0) Tensin-1| Length = 1735 Score = 31.6 bits (70), Expect = 1.7 Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 7/101 (6%) Frame = +1 Query: 250 PGSGALMHHHNQT*HASSHG-----VKPSYSASLTSVIS--MSSGALLSGTHSGSTVSAP 408 PGS H T S G + PS +A + +S G +G H GSTVS+P Sbjct: 1175 PGSPQARHRTVGTNTPPSPGFGRRAINPSMAAPSSPSLSHHQMMGPPGTGFH-GSTVSSP 1233 Query: 409 PSGCSSDPSSLFRSGFPSSIFGILSPKRNEILSSSSLPSMG 531 S ++ P S P+ ++ + S N++ ++ PS+G Sbjct: 1234 QSSAATTPGSPSLCRHPAGVYQV-SGLHNKVATTPGSPSLG 1273
>GATA2_CHICK (P23824) GATA-binding factor 2 (GATA-2) (Transcription factor| NF-E1B) Length = 466 Score = 31.6 bits (70), Expect = 1.7 Identities = 33/105 (31%), Positives = 43/105 (40%), Gaps = 15/105 (14%) Frame = +1 Query: 271 HHHNQ---------T*HASSHG------VKPSYSASLTSVISMSSGALLSGTHSGSTVSA 405 HHHN H S+ G V P S S T+ +S + A SG+H Sbjct: 108 HHHNPWTVNPFTKTPLHPSAAGAPGAISVYPGSSTSSTASVSSLTPASHSGSHLFGFPPT 167 Query: 406 PPSGCSSDPSSLFRSGFPSSIFGILSPKRNEILSSSSLPSMGVTM 540 PP S DP+S + PSS G ++ I SL S G+ M Sbjct: 168 PPKEVSPDPNST-SAASPSSSAGARQEDKDSIKYQVSL-SEGMKM 210
>TAB3_HUMAN (Q8N5C8) Mitogen-activated protein kinase kinase kinase| 7-interacting protein 3 (TAK1-binding protein 3) (NF-kappa-B-activating protein 1) Length = 712 Score = 31.2 bits (69), Expect = 2.2 Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 14/115 (12%) Frame = +1 Query: 184 NYYRKNQGMATTLPL*QPSTRKPGSGALMHHHNQT*HASSHG-VKPSYSASLTSVISM-- 354 N +N+ + L + PS+ PG GA ++ H+SS G + P ++A + + Sbjct: 64 NRMNRNRLLHINLGIHSPSSYHPGDGAQLNGGRTLVHSSSDGHIDPQHAAGKQLICLVQE 123 Query: 355 --SSGALLSGT---------HSGSTVSAPPSGCSSDPSSLFRSGFPSSIFGILSP 486 S+ A+++ T + + PPS PSS+ PS++ G P Sbjct: 124 PHSAPAVVAATPNYNPFFMNEQNRSAATPPSQPPQQPSSMQTGMNPSAMQGPSPP 178
>YEJ2_YEAST (P40007) Hypothetical 26.9 kDa protein in MNN1-PMI40 intergenic| region Length = 231 Score = 31.2 bits (69), Expect = 2.2 Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 1/60 (1%) Frame = -1 Query: 533 TPMDGREL-LERISFRFGLKIPKIDDGKPDLKSDDGSDEQPDGGAETVDPECVPESKAPE 357 TP G+E L ++ R L P +D+ D D+G DEQ D A TV+ + E++ PE Sbjct: 61 TPAGGKEADLSKVVKRIPLTKPVLDE---DEDEDEGEDEQNDYNAATVE---LDENEIPE 114
>AMPM_BACSU (P19994) Methionine aminopeptidase (EC 3.4.11.18) (MAP) (Peptidase| M) Length = 248 Score = 31.2 bits (69), Expect = 2.2 Identities = 22/71 (30%), Positives = 29/71 (40%) Frame = +1 Query: 304 HGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDPSSLFRSGFPSSIFGILS 483 HG+ S +IS+ GA L+G H S + P S D L S G+ Sbjct: 77 HGIPGSRVLKDGDIISIDIGAKLNGYHGDSAWTYPVGNISDDDKKLLEVTEESLYKGLQE 136 Query: 484 PKRNEILSSSS 516 K E LS+ S Sbjct: 137 AKPGERLSNIS 147
>LMNA_RAT (P48679) Lamin-A| Length = 665 Score = 30.8 bits (68), Expect = 2.8 Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 8/92 (8%) Frame = +1 Query: 265 LMHHHNQT*HASSHGVKPSYSASLTSVISMSSG------ALLSGTHSGSTVSAPPSGCSS 426 L+HHH + H SS G Y+ +V+ + G A SG G ++S+ S S Sbjct: 563 LLHHHRGS-HCSSSGDPAEYNLRSRTVLCGTCGQPADKAASGSGAQVGGSISSGSSASSV 621 Query: 427 DPSSLFRS--GFPSSIFGILSPKRNEILSSSS 516 + FRS G FG R+ +L +SS Sbjct: 622 TVTRSFRSVGGSGGGSFGDNLVTRSYLLGNSS 653
>CHI3_CANAL (P40954) Chitinase 3 precursor (EC 3.2.1.14)| Length = 567 Score = 30.8 bits (68), Expect = 2.8 Identities = 28/112 (25%), Positives = 45/112 (40%), Gaps = 8/112 (7%) Frame = +1 Query: 214 TTLPL*QPSTRKPGSGALMHHHNQT*HASSHGVKPSYSASLTSVISMSSGALLSGTHSGS 393 TT +T S + T +S + + S++ +S S S+ + S T S S Sbjct: 325 TTTTTTTSTTISSSSSSSKTSKTSTTSTTSSSISSTTSSTTSSTSSSSTSSSTSSTTSSS 384 Query: 394 TVS--------APPSGCSSDPSSLFRSGFPSSIFGILSPKRNEILSSSSLPS 525 T S AP S S S++ S S + S + +++ SSL S Sbjct: 385 TTSSQISTTSTAPTSSTSLSSSTISTSASTSDTTSVTSSETTPVVTPSSLSS 436
>TAB3_MOUSE (Q571K4) Mitogen-activated protein kinase kinase kinase| 7-interacting protein 3 (TAK1-binding protein 3) Length = 716 Score = 30.8 bits (68), Expect = 2.8 Identities = 28/115 (24%), Positives = 50/115 (43%), Gaps = 14/115 (12%) Frame = +1 Query: 184 NYYRKNQGMATTLPL*QPSTRKPGSGALMHHHNQT*HASSHG-VKPSYSASLTSVISM-- 354 N +N+ + L + PS+ PG GA ++ H+SS G + P ++A + + Sbjct: 64 NRMNRNRLLHINLGIHSPSSYHPGDGAHLNGGRTLVHSSSDGHIDPQHTAGKQLICLVQE 123 Query: 355 --SSGALLSGT---------HSGSTVSAPPSGCSSDPSSLFRSGFPSSIFGILSP 486 S+ A+++ T + + PPS PSS+ PS++ G P Sbjct: 124 PHSAPAVVAATPNYNPFFMNEQNRSAATPPSQPPQQPSSMQTGMNPSAMQGPSPP 178
>YB1E_SCHPO (P87179) Serine-rich protein C30B4.01c precursor| Length = 374 Score = 30.4 bits (67), Expect = 3.7 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 5/82 (6%) Frame = +1 Query: 295 ASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDP--SSLFRSGFPSSI 468 +SS S S+S +S S+ + S +HS S+ S+ S SS P SS F + SS Sbjct: 189 SSSSSSSSSSSSSSSSSSSVPITSSTSSSHSSSSSSSSSSSSSSRPSSSSSFITTMSSST 248 Query: 469 F---GILSPKRNEILSSSSLPS 525 F ++P + +SS +PS Sbjct: 249 FISTVTVTPSSSSSSTSSEVPS 270 Score = 30.4 bits (67), Expect = 3.7 Identities = 26/76 (34%), Positives = 35/76 (46%) Frame = +1 Query: 295 ASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDPSSLFRSGFPSSIFG 474 +SS PS S++ T+ SS S + S S+ S+ S SS SS S SS Sbjct: 137 SSSSSSSPSSSSTTTTTSPSSSS---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 193 Query: 475 ILSPKRNEILSSSSLP 522 S + SSSS+P Sbjct: 194 SSSSSSSSSSSSSSVP 209
>VILI2_ARATH (O81644) Villin-2| Length = 976 Score = 30.4 bits (67), Expect = 3.7 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 6/51 (11%) Frame = -1 Query: 467 IDDGKPDLKSDDGS------DEQPDGGAETVDPECVPESKAPEDMDITDVK 333 +DDGK D +SD G+ P G D + VPES P+ ITD K Sbjct: 211 VDDGKLDTESDSGAFWVLFGGFAPIGRKVANDDDIVPESTPPKLYCITDGK 261
>ATX7_HUMAN (O15265) Ataxin-7 (Spinocerebellar ataxia type 7 protein)| Length = 892 Score = 30.4 bits (67), Expect = 3.7 Identities = 19/49 (38%), Positives = 27/49 (55%) Frame = +1 Query: 292 HASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDPSS 438 H ++ +P+ S ++ V SM S + S + S ST PSG SS PSS Sbjct: 621 HGTTLNAQPAASGAMDPVCSMQSRQVSSSSSSPST----PSGLSSVPSS 665
>CALX_CANFA (P24643) Calnexin precursor (pp90)| Length = 593 Score = 30.4 bits (67), Expect = 3.7 Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 12/78 (15%) Frame = -1 Query: 479 KIPKIDDGKPDLKSDDGSDEQPDGGAETVD------PECVPESKA--PEDM--DITDVKD 330 KIP D KPD ++D + PD A D PE VP+ A PED D+ + Sbjct: 293 KIPDPDAVKPDDWNEDAPAKIPDEEATKPDGWLDDEPEYVPDPDAEKPEDWDEDMDGEWE 352 Query: 329 AE*LGLTPCEEA--CHVW 282 A + CE A C VW Sbjct: 353 APQIANPKCESAPGCGVW 370
>WSC3_YEAST (Q12215) Cell wall integrity and stress response component 3| precursor Length = 556 Score = 30.0 bits (66), Expect = 4.8 Identities = 26/80 (32%), Positives = 37/80 (46%), Gaps = 2/80 (2%) Frame = +1 Query: 280 NQT*HASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDPSSLFRSGFP 459 + T +S + S++ +S S S+ + S T S +T S S SS SS S Sbjct: 194 SSTSSTTSSTTSSTTSSTTSSTTSSSTSSTTSSTTSSTTSSTTSSTTSSTTSSTTSSTTS 253 Query: 460 S--SIFGILSPKRNEILSSS 513 S SIF + S + LSSS Sbjct: 254 STTSIFSVTSSSSSITLSSS 273
>GUAA_CHLCV (Q822V6) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 512 Score = 30.0 bits (66), Expect = 4.8 Identities = 15/42 (35%), Positives = 26/42 (61%) Frame = +1 Query: 430 PSSLFRSGFPSSIFGILSPKRNEILSSSSLPSMGVTMTHRLV 555 PS L SG P S++ SPK ++ + +S++P +GV +L+ Sbjct: 45 PSGLIFSGGPHSVYQENSPKVDKEIYNSNIPILGVCYGMQLI 86
>AGA1_YEAST (P32323) A-agglutinin attachment subunit precursor| Length = 725 Score = 30.0 bits (66), Expect = 4.8 Identities = 27/71 (38%), Positives = 34/71 (47%), Gaps = 1/71 (1%) Frame = +1 Query: 319 SYSASLTSVISMSSGALLSGTH-SGSTVSAPPSGCSSDPSSLFRSGFPSSIFGILSPKRN 495 S S+SLTS S S+ S T S S+ S PS S+ SS S PSS S Sbjct: 232 STSSSLTSTSSSSTSTSQSSTSTSSSSTSTSPSSTSTSSSST--STSPSSKSTSASSTST 289 Query: 496 EILSSSSLPSM 528 S+S+ PS+ Sbjct: 290 SSYSTSTSPSL 300
>DEXT_STRDO (P39653) Dextranase precursor (EC 3.2.1.11)| (Alpha-1,6-glucan-6-glucanohydrolase) Length = 1337 Score = 30.0 bits (66), Expect = 4.8 Identities = 12/42 (28%), Positives = 22/42 (52%) Frame = -1 Query: 473 PKIDDGKPDLKSDDGSDEQPDGGAETVDPECVPESKAPEDMD 348 P++D+ K ++ D G+D+ P+ G D + PE+ D Sbjct: 1091 PEVDETKSEVTPDSGTDKAPEAGQVDSDKAPTVKPSTPENND 1132
>SRP40_YEAST (P32583) Suppressor protein SRP40| Length = 406 Score = 30.0 bits (66), Expect = 4.8 Identities = 26/74 (35%), Positives = 33/74 (44%) Frame = +1 Query: 295 ASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDPSSLFRSGFPSSIFG 474 +SS S S+S +S S SSG S + S S+ S+ S SSD S S SS Sbjct: 28 SSSSSSSSSSSSSSSSSSSSSSGESSSSSSSSSSSSSSDSSDSSDSESSSSSSSSSSSSS 87 Query: 475 ILSPKRNEILSSSS 516 S + S SS Sbjct: 88 SSSDSESSSESDSS 101
>YG1F_YEAST (P53214) Hypothetical 57.5 kDa protein in VMA7-RPS25A intergenic| region Length = 551 Score = 29.6 bits (65), Expect = 6.3 Identities = 29/80 (36%), Positives = 33/80 (41%), Gaps = 3/80 (3%) Frame = +1 Query: 325 SASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDPSSLFRSGFPSSIFGILSPKRNE-- 498 S S TS SS LS T S S+ SS SS SS +SP + Sbjct: 80 SVSFTSFPQSSSLLTLSSTLSSELSSSSMQVSSSSTSSSSSEVTSSSSSSSISPSSSSST 139 Query: 499 -ILSSSSLPSMGVTMTHRLV 555 I SSSSLP+ V T V Sbjct: 140 IISSSSSLPTFTVASTSSTV 159 Score = 29.3 bits (64), Expect = 8.2 Identities = 31/106 (29%), Positives = 46/106 (43%) Frame = +1 Query: 208 MATTLPL*QPSTRKPGSGALMHHHNQT*HASSHGVKPSYSASLTSVISMSSGALLSGTHS 387 +A+T ST S ++ + T SS S+S+++ +S SS + S Sbjct: 152 VASTSSTVASSTLSTSSSLVISTSSSTFTFSSESSSSLISSSISTSVSTSSVYVPS---- 207 Query: 388 GSTVSAPPSGCSSDPSSLFRSGFPSSIFGILSPKRNEILSSSSLPS 525 S+ S+PPS S SS + S SS S + SSSS S Sbjct: 208 -SSTSSPPSSSSELTSSSYSSSSSSSTLFSYSSSFSSSSSSSSSSS 252
>USH2A_MOUSE (Q2QI47) Usherin precursor (Usher syndrome type-2A protein homolog)| (Usher syndrome type IIa protein homolog) Length = 5193 Score = 29.6 bits (65), Expect = 6.3 Identities = 22/62 (35%), Positives = 31/62 (50%) Frame = +1 Query: 310 VKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDPSSLFRSGFPSSIFGILSPK 489 ++PS +++ V S G S T S T APP + DP +L +G P SI +P Sbjct: 4403 LQPSTQYNISLVACTSGGCTASRTTSAWTKEAPPE--NMDPPTLHITG-PESIEITWTPP 4459 Query: 490 RN 495 RN Sbjct: 4460 RN 4461
>RPGR_MOUSE (Q9R0X5) X-linked retinitis pigmentosa GTPase regulator (mRpgr)| Length = 1001 Score = 29.6 bits (65), Expect = 6.3 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = -1 Query: 437 DDGSDEQPDGGAETVDPECVPESKAPEDMDITDVK 333 D +E+ +G E V+ +PE++ E +DITD K Sbjct: 843 DTVEEERKEGEKEIVEEGSIPETEGSETIDITDEK 877
>CSKI1_MOUSE (Q6P9K8) Caskin-1 (CASK-interacting protein 1)| Length = 1431 Score = 29.6 bits (65), Expect = 6.3 Identities = 23/75 (30%), Positives = 34/75 (45%) Frame = +1 Query: 292 HASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDPSSLFRSGFPSSIF 471 HA S GVK L +V+S S +S + G + PP G S S + ++ Sbjct: 406 HAGSEGVK-----LLATVLSQKS---VSESSPGDSPVKPPEGSSGAARSQPPAAHAGQVY 457 Query: 472 GILSPKRNEILSSSS 516 G PK+ E S+S+ Sbjct: 458 GEQPPKKLESASASA 472
>DP87_DICDI (Q04503) Prespore protein DP87 precursor| Length = 555 Score = 29.6 bits (65), Expect = 6.3 Identities = 23/58 (39%), Positives = 30/58 (51%), Gaps = 1/58 (1%) Frame = +1 Query: 295 ASSHGVKPSYSASLTSVISM-SSGALLSGTHSGSTVSAPPSGCSSDPSSLFRSGFPSS 465 +S+ PS SA+ ++ S SS A S S ++ SAP S SS PSS S SS Sbjct: 484 SSAASSSPSSSAASSAASSEPSSSAASSSAPSSASSSAPSSASSSAPSSSASSSAASS 541
>GUAA_VIBCH (Q9KTW2) GMP synthase [glutamine-hydrolyzing] (EC 6.3.5.2)| (Glutamine amidotransferase) (GMP synthetase) Length = 517 Score = 29.6 bits (65), Expect = 6.3 Identities = 15/44 (34%), Positives = 27/44 (61%) Frame = -1 Query: 524 DGRELLERISFRFGLKIPKIDDGKPDLKSDDGSDEQPDGGAETV 393 +G +++E +FGL I K+D + LK+ +G DE P+ +T+ Sbjct: 261 EGEQVMEMFGDKFGLNIIKVDAEERFLKALEGIDE-PEAKRKTI 303
>WDR43_MOUSE (Q6ZQL4) WD-repeat protein 43 (Fragment)| Length = 665 Score = 29.3 bits (64), Expect = 8.2 Identities = 18/47 (38%), Positives = 23/47 (48%) Frame = -1 Query: 464 DDGKPDLKSDDGSDEQPDGGAETVDPECVPESKAPEDMDITDVKDAE 324 DD P+ SDD DE D +E E V E ED D+ D ++ E Sbjct: 595 DDEVPEKDSDDNWDEDEDKDSE--KDEGVDEDNEEEDEDMEDKEENE 639
>P3F2B_XENLA (P70030) POU domain, class 3, transcription factor 2-B| (Transcription factor POU3-B) (XLPOU3B) Length = 385 Score = 29.3 bits (64), Expect = 8.2 Identities = 19/56 (33%), Positives = 20/56 (35%), Gaps = 1/56 (1%) Frame = +1 Query: 250 PGSGALMHHHN-QT*HASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPS 414 PGSG MHHH + H HG S T L G H S P S Sbjct: 154 PGSGQGMHHHGLRDSHDDHHGDHGHQQPSQTQQQQQQHSQLQGGHHDHSDEDTPTS 209
>CSPG5_CHICK (Q9DF69) Chondroitin sulfate proteoglycan 5 precursor (Acidic| leucine-rich EGF-like domain-containing brain protein) [Contains: Chondroitin sulfate proteoglycan 5, 38 kDa form; Chondroitin sulfate proteoglycan 5, 80 kDa form] Length = 594 Score = 29.3 bits (64), Expect = 8.2 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = -1 Query: 464 DDGKPDLKSDDGSDEQPDGGAETVDPECVPESKAP 360 DD + +L+ D+ +E+ DGG E + P S AP Sbjct: 352 DDAEEELEEDEEEEEEEDGGLEDENGYRPPASAAP 386
>MINT_MOUSE (Q62504) Msx2-interacting protein (SPEN homolog)| (SMART/HDAC1-associated repressor protein) Length = 3644 Score = 29.3 bits (64), Expect = 8.2 Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 3/65 (4%) Frame = +1 Query: 295 ASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPS---GCSSDPSSLFRSGFPSS 465 A HG KP++ AS T + + + + SAPPS G + P G + Sbjct: 2214 APEHGHKPAHQASETELAAAIGSIISDASGEPENFSAPPSVPPGSQTHPREGMEPGLHEA 2273 Query: 466 IFGIL 480 GIL Sbjct: 2274 ESGIL 2278
>BYN_DROME (P55965) T-related protein (Trp) (Protein brachyenteron)| Length = 697 Score = 29.3 bits (64), Expect = 8.2 Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%) Frame = +1 Query: 316 PSYSASLTSVISMSSGAL---LSGTHSGSTVSAPPSGCSSDPSSLFRSGFPS 462 PS + TS+ S S+G++ +S + G SAP +GC S SS +SGF S Sbjct: 377 PSAPQTPTSLHSTSTGSVSTSVSSSSGGGIGSAPSTGCFS--SSYAQSGFMS 426
>FLO9_YEAST (P39712) Flocculation protein FLO9 precursor| Length = 1322 Score = 29.3 bits (64), Expect = 8.2 Identities = 28/78 (35%), Positives = 36/78 (46%), Gaps = 5/78 (6%) Frame = +1 Query: 325 SASLTSVISMSSGALLSGTHSGSTVSAPPSGCSSDPSSLFRSGFPSSIF--GILSPKRNE 498 SAS+ S S SS S + SGS+ S S S+ SS S P S + L P + Sbjct: 939 SASILSESSKSSVIPTSSSTSGSSESETGSASSASSSSSISSESPKSTYSSSSLPPVTSA 998 Query: 499 ILS---SSSLPSMGVTMT 543 S +SSLP + T T Sbjct: 999 TTSQEITSSLPPVTTTKT 1016
>EP84_HCMVA (P17151) Early phosphoprotein p84| Length = 684 Score = 29.3 bits (64), Expect = 8.2 Identities = 24/76 (31%), Positives = 34/76 (44%) Frame = +1 Query: 238 STRKPGSGALMHHHNQT*HASSHGVKPSYSASLTSVISMSSGALLSGTHSGSTVSAPPSG 417 S+ S + HHH+ H + +T V + + GALL G+ VS+P Sbjct: 316 SSSAVSSSSNNHHHHHHHHNA-----------VTDVAAGTDGALLLPIERGAVVSSP--- 361 Query: 418 CSSDPSSLFRSGFPSS 465 S+ PSSL PSS Sbjct: 362 SSTSPSSLLSLPRPSS 377 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 82,039,015 Number of Sequences: 219361 Number of extensions: 1687062 Number of successful extensions: 5671 Number of sequences better than 10.0: 42 Number of HSP's better than 10.0 without gapping: 5292 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5619 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4757699440 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
