Clone Name | rbart42g06 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | GSTU6_ORYSA (Q06398) Probable glutathione S-transferase GSTU6 (E... | 39 | 0.006 | 2 | GSTX2_MAIZE (P50472) Probable glutathione S-transferase BZ2 (EC ... | 37 | 0.017 | 3 | CD3E_RABIT (Q9TUF9) T-cell surface glycoprotein CD3 epsilon chai... | 29 | 4.7 |
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>GSTU6_ORYSA (Q06398) Probable glutathione S-transferase GSTU6 (EC 2.5.1.18) (28| kDa cold-induced protein) Length = 236 Score = 38.9 bits (89), Expect = 0.006 Identities = 18/33 (54%), Positives = 21/33 (63%) Frame = -1 Query: 446 MFGITVIDAGRTPRLAAWAERFVETEAAKKAAP 348 + G +ID RTP LAAW ERF T+AAK P Sbjct: 182 LIGRRLIDPARTPALAAWEERFRATDAAKGVVP 214
>GSTX2_MAIZE (P50472) Probable glutathione S-transferase BZ2 (EC 2.5.1.18)| (Protein bronze-2) Length = 236 Score = 37.4 bits (85), Expect = 0.017 Identities = 15/40 (37%), Positives = 25/40 (62%) Frame = -1 Query: 446 MFGITVIDAGRTPRLAAWAERFVETEAAKKAAPPMESMLE 327 + G+++IDA TP L W++RF AAK+ P E +++ Sbjct: 181 LHGLSLIDASATPLLDGWSQRFAAHPAAKRVLPDTEKVVQ 220
>CD3E_RABIT (Q9TUF9) T-cell surface glycoprotein CD3 epsilon chain precursor| Length = 198 Score = 29.3 bits (64), Expect = 4.7 Identities = 13/27 (48%), Positives = 16/27 (59%) Frame = +2 Query: 35 SKNKEYNHIVYKKYNTVLLCNEIDHTT 115 +KNKE HI+Y K C E+D TT Sbjct: 94 TKNKENEHILYLKARVCEACMEVDLTT 120 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 47,537,237 Number of Sequences: 219361 Number of extensions: 640781 Number of successful extensions: 1636 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 1614 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1635 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2735358828 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)