ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart42g04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
2dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
3dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
4dbj|AK120024.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 5e-10
5dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
6gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 54 4e-04
7emb|BX276100.4|CNS09S4X Oryza sativa chromosome 12, . Partial se... 54 4e-04
8emb|BX957224.1| Oryza sativa chromosome 12, . Partial sequence f... 54 4e-04
9ref|XM_482870.1| Oryza sativa (japonica cultivar-group), mRNA 50 0.007
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
11dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
12gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 48 0.028
13ref|NM_192729.1| Oryza sativa (japonica cultivar-group), predic... 48 0.028
14dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.028
15dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.028
16dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic D... 48 0.028
17dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.028
18dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.028
19dbj|AK058425.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.028
20ref|XM_481142.1| Oryza sativa (japonica cultivar-group), mRNA 44 0.43
21emb|AL358214.10| Human DNA sequence from clone RP11-675O23 on ch... 44 0.43
22emb|AL023574.1|HS113J7 Human DNA sequence from clone RP6-113J7 o... 44 0.43
23gb|AC175824.2| Pan troglodytes BAC clone CH251-171H18 from chrom... 44 0.43
24gb|AC113187.6| Homo sapiens chromosome 15, clone RP11-924B20, co... 44 0.43
25gb|AC013725.7| Homo sapiens BAC clone RP11-323F5 from 4, complet... 44 0.43
26gb|AC034244.6| Homo sapiens chromosome 5 clone RP11-101B14, comp... 44 0.43
27gb|AC073542.4|AC073542 Homo sapiens chromosome 5 clone RP11-221L... 44 0.43
28gb|AC022710.10|AC022710 Homo sapiens chromosome 15, clone RP11-9... 44 0.43
29gb|DQ217943.1| Homo sapiens ADAM metallopeptidase with thrombosp... 44 0.43
30gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 44 0.43
31dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
32dbj|AP004758.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
33dbj|AK120604.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
34dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.43
35dbj|AK105097.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
36dbj|AK102614.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.43
37ref|XM_512835.1| PREDICTED: Pan troglodytes similar to TBC1 doma... 42 1.7
38ref|XM_465232.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.7
39gb|BC003516.1| Homo sapiens TBC1 domain family, member 17, mRNA ... 42 1.7
40ref|NM_024682.1| Homo sapiens TBC1 domain family, member 17 (TBC... 42 1.7
41gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complet... 42 1.7
42gb|AY129013.1| Homo sapiens clone FP17814 unknown mRNA 42 1.7
43emb|Z93931.1|HS438G17 Human DNA sequence from clone RP3-438G17 o... 42 1.7
44emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete ... 42 1.7
45gb|AF293463.1| Homo sapiens interleukin-4 induced gene-1 protein... 42 1.7
46emb|CR613490.1| full-length cDNA clone CS0DI083YC07 of Placenta ... 42 1.7
47dbj|AK092924.1| Homo sapiens cDNA FLJ35605 fis, clone SPLEN2009340 42 1.7
48emb|CR609726.1| full-length cDNA clone CS0DK001YC16 of HeLa cell... 42 1.7
49emb|CR606871.1| full-length cDNA clone CS0DC029YH01 of Neuroblas... 42 1.7
50dbj|AK090606.1| Homo sapiens cDNA FLJ33287 fis, clone BGGI12000067 42 1.7
51emb|CR598900.1| full-length cDNA clone CS0DF002YH17 of Fetal bra... 42 1.7
52emb|CR596468.1| full-length cDNA clone CS0DI016YC23 of Placenta ... 42 1.7
53dbj|AK022230.1| Homo sapiens cDNA FLJ12168 fis, clone MAMMA10006... 42 1.7
54gb|AC118342.2| Homo sapiens chromosome 19 clone LLNLF-161B9, com... 42 1.7
55gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.7
56dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
57dbj|AP004891.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
58dbj|AK068924.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
59emb|AL591770.3|CNS07EGN Human chromosome 14 DNA sequence BAC R-1... 42 1.7
60dbj|AK074097.1| Homo sapiens mRNA for FLJ00168 protein 42 1.7
61ref|NM_188283.1| Oryza sativa (japonica cultivar-group), predic... 40 6.7
62ref|XM_482490.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.7
63ref|XM_462658.1| Oryza sativa (japonica cultivar-group), predic... 40 6.7
64gb|CP000352.1| Ralstonia metallidurans CH34, complete genome 40 6.7
65emb|AL645944.11| Human DNA sequence from clone RP11-179G8 on chr... 40 6.7
66emb|AL390738.4| Human DNA sequence from clone RP11-438F9 on chro... 40 6.7
67gb|AY339374.1| Oryza sativa (japonica cultivar-group) Ap21 mRNA,... 40 6.7
68gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 40 6.7
69emb|AL157890.11| Human DNA sequence from clone RP11-164I17 on ch... 40 6.7
70gb|AC124785.7| Rattus norvegicus 4 BAC CH230-141I8 (Children's H... 40 6.7
71gb|AC154784.2| Mus musculus BAC clone RP23-90B4 from chromosome ... 40 6.7
72gb|AE006013.1| Caulobacter crescentus CB15 section 339 of 359 of... 40 6.7
73gb|AC141418.11| Pan troglodytes clone rp43-121l12, complete sequ... 40 6.7
74gb|AC067718.20| Homo sapiens 3 BAC RP11-198M8 (Roswell Park Canc... 40 6.7
75gb|CP000134.1| Rhizobium etli CFN 42 plasmid p42a, complete sequ... 40 6.7
76gb|AC099660.5| Homo sapiens 3 BAC RP11-3A3 (Roswell Park Cancer ... 40 6.7
77gb|AC104447.2| Homo sapiens chromosome 3 clone RP11-447D11, comp... 40 6.7
78gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 6.7
79gb|AC155273.3| Mus musculus BAC clone RP23-36K2 from chromosome ... 40 6.7
80dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
81gb|AC021150.9| Homo sapiens BAC clone RP11-477D13 from 2, comple... 40 6.7
82dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
83dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
84dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
85dbj|AK120786.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
86dbj|AK109494.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
87dbj|AK108873.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.7
88emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 40 6.7
89gb|AC107632.21| Mus musculus chromosome 9, clone RP23-6I5, compl... 40 6.7
90emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310... 40 6.7
91emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260... 40 6.7
92emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4,... 40 6.7
93emb|AL583887.9| Mouse DNA sequence from clone RP23-121M7 on chro... 40 6.7
94dbj|AP000355.1| Homo sapiens genomic DNA, chromosome 22q11.2, cl... 40 6.7 
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 289/373 (77%)
 Strand = Plus / Minus

                                                                            
Query: 123      aaatgtaatcacaagtctcttgcgcgaagccgatctgagacccgacggtgtcgaaaatca 182
                |||| ||||||||||||||||| || || || || ||||| || |  ||||| || || |
Sbjct: 15292068 aaatataatcacaagtctcttgtgcaaatccaatttgagatcctagagtgtcaaatatga 15292009

                                                                            
Query: 183      ccctcaggttcttctgctggtagttgccgatgatgggggtgtcgtactcggacttgaggg 242
                ||||||| |||||||||||||| || || ||||| |  || || ||||| || || ||||
Sbjct: 15292008 ccctcagattcttctgctggtaattaccaatgattgaagtttcatactcagatttcaggg 15291949

                                                                            
Query: 243      aggcgagagccaggcacacctgcgaggcgtcgccggtgaccacgtagagcacgcccttgg 302
                |||| ||||||| ||| ||||| || |  || | | |||| | ||||||||| ||  |||
Sbjct: 15291948 aggccagagccaagcaaacctgagaagaatcactgctgacaaagtagagcactccactgg 15291889

                                                                            
Query: 303      agtccacctccacctccgcgccgccgtcgaacaccagcttcaggctcggcacctgcacct 362
                | || |||||||||||| |   ||| || ||||| | ||||||||| || | |||||| |
Sbjct: 15291888 aatcaacctccacctccacattgccttcaaacacaaacttcaggctaggaatctgcactt 15291829

                                                                            
Query: 363      ccctcagccccgtcaggtcaaagcaggtgtccaggatggagaagggcgccgcctgcgggt 422
                | || | ||| |||| ||  ||||| ||||| || || |||||   || ||| ||||| |
Sbjct: 15291828 ctctgaaccctgtcaagttgaagcaagtgtcaagaatcgagaaccccggcgcttgcggat 15291769

                                                                            
Query: 423      actccgccagctggctcacgaactcggcccgcaccgccgcgtacacggacggcaccaggc 482
                ||||||| | |||||||| |||||| |||   |||||   |||||| || ||||| ||||
Sbjct: 15291768 actccgcgaactggctcaagaactctgccttgaccgcattgtacaccgaaggcacgaggc 15291709

                             
Query: 483      tcgtgatgatcgt 495
                |||||||||||||
Sbjct: 15291708 tcgtgatgatcgt 15291696
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>dbj|AP005579.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OJ1740_D06
          Length = 187410

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 289/373 (77%)
 Strand = Plus / Minus

                                                                          
Query: 123    aaatgtaatcacaagtctcttgcgcgaagccgatctgagacccgacggtgtcgaaaatca 182
              |||| ||||||||||||||||| || || || || ||||| || |  ||||| || || |
Sbjct: 186044 aaatataatcacaagtctcttgtgcaaatccaatttgagatcctagagtgtcaaatatga 185985

                                                                          
Query: 183    ccctcaggttcttctgctggtagttgccgatgatgggggtgtcgtactcggacttgaggg 242
              ||||||| |||||||||||||| || || ||||| |  || || ||||| || || ||||
Sbjct: 185984 ccctcagattcttctgctggtaattaccaatgattgaagtttcatactcagatttcaggg 185925

                                                                          
Query: 243    aggcgagagccaggcacacctgcgaggcgtcgccggtgaccacgtagagcacgcccttgg 302
              |||| ||||||| ||| ||||| || |  || | | |||| | ||||||||| ||  |||
Sbjct: 185924 aggccagagccaagcaaacctgagaagaatcactgctgacaaagtagagcactccactgg 185865

                                                                          
Query: 303    agtccacctccacctccgcgccgccgtcgaacaccagcttcaggctcggcacctgcacct 362
              | || |||||||||||| |   ||| || ||||| | ||||||||| || | |||||| |
Sbjct: 185864 aatcaacctccacctccacattgccttcaaacacaaacttcaggctaggaatctgcactt 185805

                                                                          
Query: 363    ccctcagccccgtcaggtcaaagcaggtgtccaggatggagaagggcgccgcctgcgggt 422
              | || | ||| |||| ||  ||||| ||||| || || |||||   || ||| ||||| |
Sbjct: 185804 ctctgaaccctgtcaagttgaagcaagtgtcaagaatcgagaaccccggcgcttgcggat 185745

                                                                          
Query: 423    actccgccagctggctcacgaactcggcccgcaccgccgcgtacacggacggcaccaggc 482
              ||||||| | |||||||| |||||| |||   |||||   |||||| || ||||| ||||
Sbjct: 185744 actccgcgaactggctcaagaactctgccttgaccgcattgtacaccgaaggcacgaggc 185685

                           
Query: 483    tcgtgatgatcgt 495
              |||||||||||||
Sbjct: 185684 tcgtgatgatcgt 185672
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>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0418B08
          Length = 165909

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 289/373 (77%)
 Strand = Plus / Minus

                                                                         
Query: 123   aaatgtaatcacaagtctcttgcgcgaagccgatctgagacccgacggtgtcgaaaatca 182
             |||| ||||||||||||||||| || || || || ||||| || |  ||||| || || |
Sbjct: 71257 aaatataatcacaagtctcttgtgcaaatccaatttgagatcctagagtgtcaaatatga 71198

                                                                         
Query: 183   ccctcaggttcttctgctggtagttgccgatgatgggggtgtcgtactcggacttgaggg 242
             ||||||| |||||||||||||| || || ||||| |  || || ||||| || || ||||
Sbjct: 71197 ccctcagattcttctgctggtaattaccaatgattgaagtttcatactcagatttcaggg 71138

                                                                         
Query: 243   aggcgagagccaggcacacctgcgaggcgtcgccggtgaccacgtagagcacgcccttgg 302
             |||| ||||||| ||| ||||| || |  || | | |||| | ||||||||| ||  |||
Sbjct: 71137 aggccagagccaagcaaacctgagaagaatcactgctgacaaagtagagcactccactgg 71078

                                                                         
Query: 303   agtccacctccacctccgcgccgccgtcgaacaccagcttcaggctcggcacctgcacct 362
             | || |||||||||||| |   ||| || ||||| | ||||||||| || | |||||| |
Sbjct: 71077 aatcaacctccacctccacattgccttcaaacacaaacttcaggctaggaatctgcactt 71018

                                                                         
Query: 363   ccctcagccccgtcaggtcaaagcaggtgtccaggatggagaagggcgccgcctgcgggt 422
             | || | ||| |||| ||  ||||| ||||| || || |||||   || ||| ||||| |
Sbjct: 71017 ctctgaaccctgtcaagttgaagcaagtgtcaagaatcgagaaccccggcgcttgcggat 70958

                                                                         
Query: 423   actccgccagctggctcacgaactcggcccgcaccgccgcgtacacggacggcaccaggc 482
             ||||||| | |||||||| |||||| |||   |||||   |||||| || ||||| ||||
Sbjct: 70957 actccgcgaactggctcaagaactctgccttgaccgcattgtacaccgaaggcacgaggc 70898

                          
Query: 483   tcgtgatgatcgt 495
             |||||||||||||
Sbjct: 70897 tcgtgatgatcgt 70885
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>dbj|AK120024.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-C07, full
            insert sequence
          Length = 1568

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 289/373 (77%)
 Strand = Plus / Minus

                                                                        
Query: 123  aaatgtaatcacaagtctcttgcgcgaagccgatctgagacccgacggtgtcgaaaatca 182
            |||| ||||||||||||||||| || || || || ||||| || |  ||||| || || |
Sbjct: 1446 aaatataatcacaagtctcttgtgcaaatccaatttgagatcctagagtgtcaaatatga 1387

                                                                        
Query: 183  ccctcaggttcttctgctggtagttgccgatgatgggggtgtcgtactcggacttgaggg 242
            ||||||| |||||||||||||| || || ||||| |  || || ||||| || || ||||
Sbjct: 1386 ccctcagattcttctgctggtaattaccaatgatcgaagtttcatactcagatttcaggg 1327

                                                                        
Query: 243  aggcgagagccaggcacacctgcgaggcgtcgccggtgaccacgtagagcacgcccttgg 302
            |||| ||||||| ||| ||||| || |  || | | |||| | ||||||||| ||  |||
Sbjct: 1326 aggccagagccaagcaaacctgagaagaatcactgctgacaaagtagagcactccactgg 1267

                                                                        
Query: 303  agtccacctccacctccgcgccgccgtcgaacaccagcttcaggctcggcacctgcacct 362
            | || |||||||||||| |   ||| || ||||| | ||||||||| || | |||||| |
Sbjct: 1266 aatcaacctccacctccacattgccttcaaacacaaacttcaggctaggaatctgcactt 1207

                                                                        
Query: 363  ccctcagccccgtcaggtcaaagcaggtgtccaggatggagaagggcgccgcctgcgggt 422
            | || | ||| |||| ||  ||||| ||||| || || |||||   || ||| ||||| |
Sbjct: 1206 ctctgaaccctgtcaagttgaagcaagtgtcaagaatcgagaaccccggcgcttgcggat 1147

                                                                        
Query: 423  actccgccagctggctcacgaactcggcccgcaccgccgcgtacacggacggcaccaggc 482
            ||||||| | |||||||| |||||| |||   |||||   |||||| || ||||| ||||
Sbjct: 1146 actccgcgaactggctcaagaactctgccttgaccgcattgtacaccgaaggcacgaggc 1087

                         
Query: 483  tcgtgatgatcgt 495
            |||||||||||||
Sbjct: 1086 tcgtgatgatcgt 1074
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 320      gcgccgccgtcgaacaccagcttcaggctcggcacctgcacct 362
                ||||||||||||||||||||| ||||  ||||||||| |||||
Sbjct: 15506411 gcgccgccgtcgaacaccagcgtcagcttcggcaccttcacct 15506453



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 190      gttcttctgctggtagttgccgat 213
                ||||| ||||||||||||||||||
Sbjct: 24247488 gttctgctgctggtagttgccgat 24247465
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                           
Query: 320      gcgccgccgtcgaacaccagcttcaggctcggcacctgcacct 362
                ||||||||||||||||||||| ||||  ||||||||| |||||
Sbjct: 15460694 gcgccgccgtcgaacaccagcgtcagcttcggcaccttcacct 15460736



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 190      gttcttctgctggtagttgccgat 213
                ||||| ||||||||||||||||||
Sbjct: 24175694 gttctgctgctggtagttgccgat 24175671
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>emb|BX276100.4|CNS09S4X Oryza sativa chromosome 12, . Partial sequence from BAC
           OSJNBa0076H14 of library OSJNBa from chromosome 12 of
           cultivar Nipponbare of ssp. japonica of Oryza sativa
           (rice), complete sequence
          Length = 53315

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                      
Query: 320 gcgccgccgtcgaacaccagcttcaggctcggcacctgcacct 362
           ||||||||||||||||||||| ||||  ||||||||| |||||
Sbjct: 249 gcgccgccgtcgaacaccagcgtcagcttcggcaccttcacct 291
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>emb|BX957224.1| Oryza sativa chromosome 12, . Partial sequence from PCR product of
            genomic sample of chromosome 12 of cultivar Nipponbare of
            ssp. japonica of Oryza sativa (rice), complete sequence
          Length = 4525

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 39/43 (90%)
 Strand = Plus / Plus

                                                       
Query: 320  gcgccgccgtcgaacaccagcttcaggctcggcacctgcacct 362
            ||||||||||||||||||||| ||||  ||||||||| |||||
Sbjct: 4226 gcgccgccgtcgaacaccagcgtcagcttcggcaccttcacct 4268
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>ref|XM_482870.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1347

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 190  gttcttctgctggtagttgccgatgatgg 218
            ||||| |||||||||||||||||||||||
Sbjct: 1278 gttctgctgctggtagttgccgatgatgg 1250
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                             
Query: 190      gttcttctgctggtagttgccgatgatgg 218
                ||||| |||||||||||||||||||||||
Sbjct: 23059670 gttctgctgctggtagttgccgatgatgg 23059642



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 190      gttcttctgctggtagttgccgatgatggg 219
                ||||||||||||||||||||| || |||||
Sbjct: 10183865 gttcttctgctggtagttgccaataatggg 10183894



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 319      cgcgccgccgtcgaacaccagctt 342
                |||||||||| |||||||||||||
Sbjct: 20561110 cgcgccgccgacgaacaccagctt 20561133
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>dbj|AP004585.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0470B03
          Length = 163371

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                           
Query: 190    gttcttctgctggtagttgccgatgatgg 218
              ||||| |||||||||||||||||||||||
Sbjct: 119398 gttctgctgctggtagttgccgatgatgg 119370
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 323    ccgccgtcgaacaccagcttcagg 346
              ||||||||||||||||||||||||
Sbjct: 561329 ccgccgtcgaacaccagcttcagg 561306
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>ref|NM_192729.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 3006

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 305 tccacctccacctccgcgccgccg 328
           ||||||||||||||||||||||||
Sbjct: 260 tccacctccacctccgcgccgccg 237
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 313     cacctccgcgccgccgtcgaacaccagc 340
               |||| |||||||||||||||||||||||
Sbjct: 1153967 caccaccgcgccgccgtcgaacaccagc 1153940



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                           
Query: 313     cacctccgcgccgccgtcgaacaccagc 340
               |||| |||||||||||||||||||||||
Sbjct: 1137421 caccaccgcgccgccgtcgaacaccagc 1137394



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                      
Query: 383      aagcaggtgtccaggatggagaagggcgccgcctgcgg 420
                ||||||||||||||||||||| ||| || |||| ||||
Sbjct: 11330404 aagcaggtgtccaggatggagtaggtcggcgcccgcgg 11330441



 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                         
Query: 190     gttcttctgctggtagttgccgatga 215
               ||||| ||||||||||||||||||||
Sbjct: 5582038 gttctgctgctggtagttgccgatga 5582013
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 305      tccacctccacctccgcgccgccg 328
                ||||||||||||||||||||||||
Sbjct: 24101681 tccacctccacctccgcgccgccg 24101704



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 305     tccacctccacctccgcgccgccg 328
               ||||||||||||||| ||||||||
Sbjct: 5454208 tccacctccacctcctcgccgccg 5454185
to top
>dbj|AP002844.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0410E03
          Length = 164839

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 305   tccacctccacctccgcgccgccg 328
             ||||||||||||||||||||||||
Sbjct: 77503 tccacctccacctccgcgccgccg 77526
to top
>dbj|AP003457.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0660D08
          Length = 146915

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 313    cacctccgcgccgccgtcgaacaccagc 340
              |||| |||||||||||||||||||||||
Sbjct: 130190 caccaccgcgccgccgtcgaacaccagc 130163



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                          
Query: 313    cacctccgcgccgccgtcgaacaccagc 340
              |||| |||||||||||||||||||||||
Sbjct: 113644 caccaccgcgccgccgtcgaacaccagc 113617
to top
>dbj|AP003456.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
            clone:P0542E10
          Length = 146196

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 313  cacctccgcgccgccgtcgaacaccagc 340
            |||| |||||||||||||||||||||||
Sbjct: 5920 caccaccgcgccgccgtcgaacaccagc 5893
to top
>dbj|AK058425.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-015-E01, full
            insert sequence
          Length = 1389

 Score = 48.1 bits (24), Expect = 0.028
 Identities = 27/28 (96%)
 Strand = Plus / Minus

                                        
Query: 313  cacctccgcgccgccgtcgaacaccagc 340
            |||| |||||||||||||||||||||||
Sbjct: 1180 caccaccgcgccgccgtcgaacaccagc 1153
to top
>ref|XM_481142.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1575

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 190  gttcttctgctggtagttgccgatgatggg 219
            ||||||||||||||||||||| || |||||
Sbjct: 1506 gttcttctgctggtagttgccaataatggg 1477
to top
>emb|AL358214.10| Human DNA sequence from clone RP11-675O23 on chromosome 10, complete
             sequence
          Length = 181186

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 375   tcaggtcaaagcaggtgtccaggatg 400
             ||||||||||||||||| ||||||||
Sbjct: 40727 tcaggtcaaagcaggtgaccaggatg 40702
to top
>emb|AL023574.1|HS113J7 Human DNA sequence from clone RP6-113J7 on chromosome Xp11.22-11.4
              Contains a Homeobox family pseudogene, complete sequence
          Length = 117721

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 375    tcaggtcaaagcaggtgtccaggatg 400
              ||||||||||||||||| ||||||||
Sbjct: 100336 tcaggtcaaagcaggtgaccaggatg 100311
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>gb|AC175824.2| Pan troglodytes BAC clone CH251-171H18 from chromosome unknown,
             complete sequence
          Length = 146069

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 375   tcaggtcaaagcaggtgtccaggatg 400
             ||||||||||||||||| ||||||||
Sbjct: 80760 tcaggtcaaagcaggtgaccaggatg 80785
to top
>gb|AC113187.6| Homo sapiens chromosome 15, clone RP11-924B20, complete sequence
          Length = 205998

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 375   tcaggtcaaagcaggtgtccaggatg 400
             ||||||||||||||||| ||||||||
Sbjct: 35296 tcaggtcaaagcaggtgaccaggatg 35271
to top
>gb|AC013725.7| Homo sapiens BAC clone RP11-323F5 from 4, complete sequence
          Length = 166048

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 122    caaatgtaatcacaagtctctt 143
              ||||||||||||||||||||||
Sbjct: 109945 caaatgtaatcacaagtctctt 109924
to top
>gb|AC034244.6| Homo sapiens chromosome 5 clone RP11-101B14, complete sequence
          Length = 182892

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 375   tcaggtcaaagcaggtgtccaggatg 400
             ||||||||||||||||| ||||||||
Sbjct: 39975 tcaggtcaaagcaggtgaccaggatg 40000
to top
>gb|AC073542.4|AC073542 Homo sapiens chromosome 5 clone RP11-221L16, complete sequence
          Length = 141633

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 375   tcaggtcaaagcaggtgtccaggatg 400
             ||||||||||||||||| ||||||||
Sbjct: 53960 tcaggtcaaagcaggtgaccaggatg 53985
to top
>gb|AC022710.10|AC022710 Homo sapiens chromosome 15, clone RP11-90E5, complete sequence
          Length = 186517

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 375    tcaggtcaaagcaggtgtccaggatg 400
              ||||||||||||||||| ||||||||
Sbjct: 119195 tcaggtcaaagcaggtgaccaggatg 119170
to top
>gb|DQ217943.1| Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif 17
              (ADAMTS17) gene, complete cds; and 5S ribosomal RNA gene,
              complete sequence
          Length = 371157

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 375    tcaggtcaaagcaggtgtccaggatg 400
              ||||||||||||||||| ||||||||
Sbjct: 194847 tcaggtcaaagcaggtgaccaggatg 194872
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 448     ggcccgcaccgccgcgtacacg 469
               ||||||||||||||||||||||
Sbjct: 4462771 ggcccgcaccgccgcgtacacg 4462750
to top
>dbj|AP006164.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
             clone:B1386G10
          Length = 121827

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                   
Query: 383   aagcaggtgtccaggatggagaagggcgccgcctgcgg 420
             ||||||||||||||||||||| ||| || |||| ||||
Sbjct: 18113 aagcaggtgtccaggatggagtaggtcggcgcccgcgg 18150
to top
>dbj|AP004758.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0664C05
          Length = 165354

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 190    gttcttctgctggtagttgccgatga 215
              ||||| ||||||||||||||||||||
Sbjct: 128946 gttctgctgctggtagttgccgatga 128921
to top
>dbj|AK120604.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013150B18, full
            insert sequence
          Length = 1871

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 383  aagcaggtgtccaggatggagaagggcgccgcctgcgg 420
            ||||||||||||||||||||| ||| || |||| ||||
Sbjct: 1225 aagcaggtgtccaggatggagtaggtcggcgcccgcgg 1188
to top
>dbj|AP006064.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBa0023I13
          Length = 165911

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 190    gttcttctgctggtagttgccgatgatggg 219
              ||||||||||||||||||||| || |||||
Sbjct: 143211 gttcttctgctggtagttgccaataatggg 143240
to top
>dbj|AK105097.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-B11, full
            insert sequence
          Length = 2569

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                          
Query: 190  gttcttctgctggtagttgccgatgatggg 219
            ||||||||||||||||||||| || |||||
Sbjct: 2396 gttcttctgctggtagttgccaataatggg 2367
to top
>dbj|AK102614.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033099D18, full
            insert sequence
          Length = 1868

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                  
Query: 383  aagcaggtgtccaggatggagaagggcgccgcctgcgg 420
            ||||||||||||||||||||| ||| || |||| ||||
Sbjct: 1225 aagcaggtgtccaggatggagtaggtcggcgcccgcgg 1188
to top
>ref|XM_512835.1| PREDICTED: Pan troglodytes similar to TBC1 domain family, member 17
           (LOC456222), mRNA
          Length = 569

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 249 gagccaggcacacctgcgagg 269
           |||||||||||||||||||||
Sbjct: 517 gagccaggcacacctgcgagg 537
to top
>ref|XM_465232.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1967

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 190  gttcttctgctggtagttgccgatgatgg 218
            ||||| ||||||| |||||||||||||||
Sbjct: 1609 gttctgctgctggaagttgccgatgatgg 1581
to top
>gb|BC003516.1| Homo sapiens TBC1 domain family, member 17, mRNA (cDNA clone
            MGC:10751 IMAGE:3050014), complete cds
          Length = 2236

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 249  gagccaggcacacctgcgagg 269
            |||||||||||||||||||||
Sbjct: 2140 gagccaggcacacctgcgagg 2160
to top
>ref|NM_024682.1| Homo sapiens TBC1 domain family, member 17 (TBC1D17), mRNA
          Length = 2236

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 249  gagccaggcacacctgcgagg 269
            |||||||||||||||||||||
Sbjct: 2140 gagccaggcacacctgcgagg 2160
to top
>gb|CP000353.1| Ralstonia metallidurans CH34 megaplasmid, complete sequence
          Length = 2580084

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 30/33 (90%)
 Strand = Plus / Minus

                                               
Query: 270    cgtcgccggtgaccacgtagagcacgcccttgg 302
              ||||||||||||| |||| ||||| ||||||||
Sbjct: 878946 cgtcgccggtgacgacgttgagcaggcccttgg 878914
to top
>gb|AY129013.1| Homo sapiens clone FP17814 unknown mRNA
          Length = 2834

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 249  gagccaggcacacctgcgagg 269
            |||||||||||||||||||||
Sbjct: 2731 gagccaggcacacctgcgagg 2751
to top
>emb|Z93931.1|HS438G17 Human DNA sequence from clone RP3-438G17 on chromosome 6q22 Contains a
             high mobility group protein pseudogene, complete sequence
          Length = 148198

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 375   tcaggtcaaagcaggtgtccaggat 399
             ||||||||||||||||| |||||||
Sbjct: 57351 tcaggtcaaagcaggtgaccaggat 57327
to top
>emb|AL939128.1|SCO939128 Streptomyces coelicolor A3(2) complete genome; segment 25/29
          Length = 296500

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 273   cgccggtgaccacgtagagcacgcc 297
             |||||||||||||| ||||||||||
Sbjct: 38005 cgccggtgaccacgcagagcacgcc 37981
to top
>gb|AF293463.1| Homo sapiens interleukin-4 induced gene-1 protein (FIG1) gene, exons
            5 through 8 and partial cds; and GTPase-activating
            protein-like protein FLJ12168 gene, partial cds
          Length = 6933

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 249  gagccaggcacacctgcgagg 269
            |||||||||||||||||||||
Sbjct: 5806 gagccaggcacacctgcgagg 5786
to top
>emb|CR613490.1| full-length cDNA clone CS0DI083YC07 of Placenta Cot 25-normalized
           of Homo sapiens (human)
          Length = 565

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 249 gagccaggcacacctgcgagg 269
           |||||||||||||||||||||
Sbjct: 484 gagccaggcacacctgcgagg 504
to top
>dbj|AK092924.1| Homo sapiens cDNA FLJ35605 fis, clone SPLEN2009340
          Length = 1547

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 249  gagccaggcacacctgcgagg 269
            |||||||||||||||||||||
Sbjct: 1469 gagccaggcacacctgcgagg 1489
to top
>emb|CR609726.1| full-length cDNA clone CS0DK001YC16 of HeLa cells Cot 25-normalized
            of Homo sapiens (human)
          Length = 1441

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 249  gagccaggcacacctgcgagg 269
            |||||||||||||||||||||
Sbjct: 1399 gagccaggcacacctgcgagg 1419
to top
>emb|CR606871.1| full-length cDNA clone CS0DC029YH01 of Neuroblastoma Cot
            25-normalized of Homo sapiens (human)
          Length = 2064

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 249  gagccaggcacacctgcgagg 269
            |||||||||||||||||||||
Sbjct: 2015 gagccaggcacacctgcgagg 2035
to top
>dbj|AK090606.1| Homo sapiens cDNA FLJ33287 fis, clone BGGI12000067
          Length = 2066

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 249  gagccaggcacacctgcgagg 269
            |||||||||||||||||||||
Sbjct: 1988 gagccaggcacacctgcgagg 2008
to top
>emb|CR598900.1| full-length cDNA clone CS0DF002YH17 of Fetal brain of Homo sapiens
            (human)
          Length = 1510

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 249  gagccaggcacacctgcgagg 269
            |||||||||||||||||||||
Sbjct: 1445 gagccaggcacacctgcgagg 1465
to top
>emb|CR596468.1| full-length cDNA clone CS0DI016YC23 of Placenta Cot 25-normalized of
            Homo sapiens (human)
          Length = 1433

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 249  gagccaggcacacctgcgagg 269
            |||||||||||||||||||||
Sbjct: 1379 gagccaggcacacctgcgagg 1399
to top
>dbj|AK022230.1| Homo sapiens cDNA FLJ12168 fis, clone MAMMA1000625, weakly similar to
            GYP7 PROTEIN
          Length = 2130

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 249  gagccaggcacacctgcgagg 269
            |||||||||||||||||||||
Sbjct: 2046 gagccaggcacacctgcgagg 2066
to top
>gb|AC118342.2| Homo sapiens chromosome 19 clone LLNLF-161B9, complete sequence
          Length = 36532

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 249   gagccaggcacacctgcgagg 269
             |||||||||||||||||||||
Sbjct: 20421 gagccaggcacacctgcgagg 20441
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 303     agtccacctccacctccgcgc 323
               |||||||||||||||||||||
Sbjct: 2542405 agtccacctccacctccgcgc 2542425
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 190      gttcttctgctggtagttgccgatgatgg 218
                ||||| ||||||| |||||||||||||||
Sbjct: 12465135 gttctgctgctggaagttgccgatgatgg 12465107
to top
>dbj|AP004891.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0705A04
          Length = 182468

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 190    gttcttctgctggtagttgccgatgatgg 218
              ||||| ||||||| |||||||||||||||
Sbjct: 145272 gttctgctgctggaagttgccgatgatgg 145244
to top
>dbj|AK068924.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170E21, full
            insert sequence
          Length = 1967

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 190  gttcttctgctggtagttgccgatgatgg 218
            ||||| ||||||| |||||||||||||||
Sbjct: 1609 gttctgctgctggaagttgccgatgatgg 1581
to top
>emb|AL591770.3|CNS07EGN Human chromosome 14 DNA sequence BAC R-1140I5 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 158392

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 123   aaatgtaatcacaagtctctt 143
             |||||||||||||||||||||
Sbjct: 32729 aaatgtaatcacaagtctctt 32749
to top
>dbj|AK074097.1| Homo sapiens mRNA for FLJ00168 protein
          Length = 5658

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 249  gagccaggcacacctgcgagg 269
            |||||||||||||||||||||
Sbjct: 2772 gagccaggcacacctgcgagg 2752
to top
>ref|NM_188283.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 687

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 305 tccacctccacctccgcgccgccg 328
           ||||||||||||||| ||||||||
Sbjct: 412 tccacctccacctcctcgccgccg 435
to top
>ref|XM_482490.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1941

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 319  cgcgccgccgtcgaacaccagctt 342
            |||||||||| |||||||||||||
Sbjct: 1023 cgcgccgccgacgaacaccagctt 1000
to top
>ref|XM_462658.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1335

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 191  ttcttctgctggtagttgccgatgatgg 218
            |||| ||||||| |||||||||||||||
Sbjct: 1265 ttctgctgctggaagttgccgatgatgg 1238
to top
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome
          Length = 3928089

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 390     tgtccaggatggagaagggcgccg 413
               |||||| |||||||||||||||||
Sbjct: 3117275 tgtccaagatggagaagggcgccg 3117252
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>emb|AL645944.11| Human DNA sequence from clone RP11-179G8 on chromosome 1, complete
             sequence
          Length = 191247

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 351   gcacctgcacctccctcagc 370
             ||||||||||||||||||||
Sbjct: 43913 gcacctgcacctccctcagc 43932
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>emb|AL390738.4| Human DNA sequence from clone RP11-438F9 on chromosome 13 Contains the
             Gsh-1 gene for homeobox protein Gsh-1 and three CpG
             islands, complete sequence
          Length = 200833

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 375   tcaggtcaaagcaggtgtccagga 398
             ||||||||||||||||| ||||||
Sbjct: 42053 tcaggtcaaagcaggtgaccagga 42030
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>gb|AY339374.1| Oryza sativa (japonica cultivar-group) Ap21 mRNA, complete cds
          Length = 829

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 305 tccacctccacctccgcgccgccg 328
           ||||||||||||||| ||||||||
Sbjct: 481 tccacctccacctcctcgccgccg 504
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>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 375     tcaggtcaaagcaggtgtcc 394
               ||||||||||||||||||||
Sbjct: 1736315 tcaggtcaaagcaggtgtcc 1736334
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>emb|AL157890.11| Human DNA sequence from clone RP11-164I17 on chromosome 10 Contains the
             5' end of the SORBS1 gene for sorbin and SH3 domain
             containing 1 (CAP, SH3D5, SORB1, SH3P12, ponsin, sh3p12)
             (KIAA1296, DKFZp586P1422, FLJ12406), complete sequence
          Length = 95681

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 345   ggctcggcacctgcacctccctca 368
             ||||||||| ||||||||||||||
Sbjct: 40774 ggctcggcagctgcacctccctca 40751
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>gb|AC124785.7| Rattus norvegicus 4 BAC CH230-141I8 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 61619

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 28    ttgccaatcaccagtggtga 47
             ||||||||||||||||||||
Sbjct: 28908 ttgccaatcaccagtggtga 28927
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>gb|AC154784.2| Mus musculus BAC clone RP23-90B4 from chromosome 9, complete sequence
          Length = 176753

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 179  atcaccctcaggttcttctg 198
            ||||||||||||||||||||
Sbjct: 4286 atcaccctcaggttcttctg 4305
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>gb|AE006013.1| Caulobacter crescentus CB15 section 339 of 359 of the complete genome
          Length = 13369

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 287  tagagcacgcccttggagtc 306
            ||||||||||||||||||||
Sbjct: 8212 tagagcacgcccttggagtc 8231
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>gb|AC141418.11| Pan troglodytes clone rp43-121l12, complete sequence
          Length = 164116

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 350   ggcacctgcacctccctcag 369
             ||||||||||||||||||||
Sbjct: 86233 ggcacctgcacctccctcag 86252
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>gb|AC067718.20| Homo sapiens 3 BAC RP11-198M8 (Roswell Park Cancer Institute Human
            BAC Library) complete sequence
          Length = 97995

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 387  aggtgtccaggatggagaag 406
            ||||||||||||||||||||
Sbjct: 2866 aggtgtccaggatggagaag 2885
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>gb|CP000134.1| Rhizobium etli CFN 42 plasmid p42a, complete sequence
          Length = 194229

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 259    cacctgcgaggcgtcgccgg 278
              ||||||||||||||||||||
Sbjct: 104829 cacctgcgaggcgtcgccgg 104848
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>gb|AC099660.5| Homo sapiens 3 BAC RP11-3A3 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 82144

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 387   aggtgtccaggatggagaag 406
             ||||||||||||||||||||
Sbjct: 38278 aggtgtccaggatggagaag 38259
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>gb|AC104447.2| Homo sapiens chromosome 3 clone RP11-447D11, complete sequence
          Length = 202544

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 237    tgagggaggcgagagccagg 256
              ||||||||||||||||||||
Sbjct: 107950 tgagggaggcgagagccagg 107969
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 441     cgaactcggcccgcaccgcc 460
               ||||||||||||||||||||
Sbjct: 1706182 cgaactcggcccgcaccgcc 1706163
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>gb|AC155273.3| Mus musculus BAC clone RP23-36K2 from chromosome 12, complete sequence
          Length = 198927

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 303   agtccacctccacctccgcg 322
             ||||||||||||||||||||
Sbjct: 97323 agtccacctccacctccgcg 97342
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 191      ttcttctgctggtagttgccgatgatgg 218
                |||| ||||||| |||||||||||||||
Sbjct: 22324103 ttctgctgctggaagttgccgatgatgg 22324076
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>gb|AC021150.9| Homo sapiens BAC clone RP11-477D13 from 2, complete sequence
          Length = 85748

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 375   tcaggtcaaagcaggtgtccagga 398
             ||||||||||||||||| ||||||
Sbjct: 18581 tcaggtcaaagcaggtgaccagga 18558
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>dbj|AP003197.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1015E06
          Length = 164583

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 305   tccacctccacctccgcgccgccg 328
             ||||||||||||||| ||||||||
Sbjct: 51048 tccacctccacctcctcgccgccg 51025
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>dbj|AP005734.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OSJNBb0032E15
          Length = 120419

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 319   cgcgccgccgtcgaacaccagctt 342
             |||||||||| |||||||||||||
Sbjct: 65071 cgcgccgccgacgaacaccagctt 65094
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>dbj|AP003898.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1663_D06
          Length = 139103

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 319   cgcgccgccgtcgaacaccagctt 342
             |||||||||| |||||||||||||
Sbjct: 35482 cgcgccgccgacgaacaccagctt 35505
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>dbj|AK120786.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010M08, full
            insert sequence
          Length = 1770

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 191  ttcttctgctggtagttgccgatgatgg 218
            |||| ||||||| |||||||||||||||
Sbjct: 1497 ttctgctgctggaagttgccgatgatgg 1470
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>dbj|AK109494.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-206-A01, full
            insert sequence
          Length = 1610

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 191  ttcttctgctggtagttgccgatgatgg 218
            |||| ||||||| |||||||||||||||
Sbjct: 1319 ttctgctgctggaagttgccgatgatgg 1292
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>dbj|AK108873.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-152-C11, full
           insert sequence
          Length = 896

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 305 tccacctccacctccgcgccgccg 328
           ||||||||||||||| ||||||||
Sbjct: 460 tccacctccacctcctcgccgccg 483
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 322     gccgccgtcgaacaccagct 341
               ||||||||||||||||||||
Sbjct: 2545772 gccgccgtcgaacaccagct 2545791
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>gb|AC107632.21| Mus musculus chromosome 9, clone RP23-6I5, complete sequence
          Length = 201942

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 179   atcaccctcaggttcttctg 198
             ||||||||||||||||||||
Sbjct: 59019 atcaccctcaggttcttctg 59000
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>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 132733

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 190    gttcttctgctggtagttgccgat 213
              ||||| ||||||||||||||||||
Sbjct: 132179 gttctgctgctggtagttgccgat 132156
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>emb|AL772427.4|CNS08CA5 Oryza sativa chromosome 12, . BAC OJ1260_B01 of library Monsanto from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 135793

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 190   gttcttctgctggtagttgccgat 213
             ||||| ||||||||||||||||||
Sbjct: 24262 gttctgctgctggtagttgccgat 24239
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>emb|AL606448.3|OSJN00013 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064H22,
             complete sequence
          Length = 147214

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 191   ttcttctgctggtagttgccgatgatgg 218
             |||| ||||||| |||||||||||||||
Sbjct: 75007 ttctgctgctggaagttgccgatgatgg 74980
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>emb|AL583887.9| Mouse DNA sequence from clone RP23-121M7 on chromosome 15, complete
             sequence
          Length = 220050

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    ttgccaattgccaatcacca 40
             ||||||||||||||||||||
Sbjct: 89331 ttgccaattgccaatcacca 89350
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>dbj|AP000355.1| Homo sapiens genomic DNA, chromosome 22q11.2, clone KB1896H10
          Length = 173785

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 350   ggcacctgcacctccctcag 369
             ||||||||||||||||||||
Sbjct: 64617 ggcacctgcacctccctcag 64598


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,713,899
Number of Sequences: 3902068
Number of extensions: 3713899
Number of successful extensions: 105586
Number of sequences better than 10.0: 94
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 103676
Number of HSP's gapped (non-prelim): 1910
length of query: 498
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 476
effective length of database: 17,147,199,772
effective search space: 8162067091472
effective search space used: 8162067091472
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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