ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart42f09 |
|---|---|
| Clone Library Name | barley_pub |
>PAT5_SOLTU (P15478) Patatin T5 precursor (Potato tuber protein)| Length = 386 Score = 47.4 bits (111), Expect = 8e-06 Identities = 27/66 (40%), Positives = 40/66 (60%) Frame = -3 Query: 396 GQTSSVDIATKENMEALIGIGKNLLTKTVSRVTIANGMYETVDGAGTNEEAFVRFAKRLS 217 G T+ +D A++ NM+ L+ +G++LL K+VS+ D T EEA RFAK LS Sbjct: 326 GTTTELDDASEANMQLLVQVGEDLLKKSVSK-----------DNPETYEEALKRFAKLLS 374 Query: 216 EERKLR 199 + +KLR Sbjct: 375 DRKKLR 380
>PAT3_SOLTU (P11768) Patatin class 1 precursor (Patatin class I) (Potato tuber| protein) Length = 386 Score = 47.4 bits (111), Expect = 8e-06 Identities = 28/66 (42%), Positives = 38/66 (57%) Frame = -3 Query: 396 GQTSSVDIATKENMEALIGIGKNLLTKTVSRVTIANGMYETVDGAGTNEEAFVRFAKRLS 217 G T+ +D A++ NME L+ +G+ LL K VS+ D T EEA RFAK LS Sbjct: 326 GTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLS 374 Query: 216 EERKLR 199 + +KLR Sbjct: 375 DRKKLR 380
>PAT2_SOLTU (P15477) Patatin B2 precursor (Potato tuber protein)| Length = 386 Score = 47.4 bits (111), Expect = 8e-06 Identities = 28/66 (42%), Positives = 38/66 (57%) Frame = -3 Query: 396 GQTSSVDIATKENMEALIGIGKNLLTKTVSRVTIANGMYETVDGAGTNEEAFVRFAKRLS 217 G T+ +D A++ NME L+ +G+ LL K VS+ D T EEA RFAK LS Sbjct: 326 GTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLS 374 Query: 216 EERKLR 199 + +KLR Sbjct: 375 DRKKLR 380
>PAT0_SOLTU (P07745) Patatin precursor (Potato tuber protein)| Length = 386 Score = 47.4 bits (111), Expect = 8e-06 Identities = 28/66 (42%), Positives = 38/66 (57%) Frame = -3 Query: 396 GQTSSVDIATKENMEALIGIGKNLLTKTVSRVTIANGMYETVDGAGTNEEAFVRFAKRLS 217 G T+ +D A++ NME L+ +G+ LL K VS+ D T EEA RFAK LS Sbjct: 326 GTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLS 374 Query: 216 EERKLR 199 + +KLR Sbjct: 375 DRKKLR 380
>PAT1_SOLTU (P15476) Patatin B1 precursor (Potato tuber protein) (Fragment)| Length = 377 Score = 46.6 bits (109), Expect = 1e-05 Identities = 28/66 (42%), Positives = 37/66 (56%) Frame = -3 Query: 396 GQTSSVDIATKENMEALIGIGKNLLTKTVSRVTIANGMYETVDGAGTNEEAFVRFAKRLS 217 G T+ +D A++ NME L+ +G+ LL K VS+ D T EEA RFAK LS Sbjct: 317 GTTTEMDDASEANMELLVQVGETLLKKPVSK-----------DSPETYEEALKRFAKLLS 365 Query: 216 EERKLR 199 +KLR Sbjct: 366 NRKKLR 371
>EDG5_RAT (P47752) Sphingosine 1-phosphate receptor Edg-5 (S1P receptor| Edg-5) (G-protein coupled receptor H218) (AGR16) (Endothelial differentiation G-protein coupled receptor 5) (Sphingosine 1-phosphate receptor 2) (S1P2) Length = 352 Score = 30.8 bits (68), Expect = 0.81 Identities = 23/61 (37%), Positives = 35/61 (57%) Frame = +2 Query: 203 SLRSSESLLAKRTNASSLVPAPSTVSYIPLAMVTRDTVLVSRFLPIPISASMFSLVAIST 382 +L +S+ L A++L+ P T+S PL R+ S F I +SAS+FSL+AI+ Sbjct: 74 NLAASDLLAGVAFVANTLLSGPVTLSLTPLQWFAREG---SAF--ITLSASVFSLLAIAI 128 Query: 383 E 385 E Sbjct: 129 E 129
>RPOB_PLAFA (P21421) DNA-directed RNA polymerase beta chain (EC 2.7.7.6)| Length = 1024 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/44 (31%), Positives = 24/44 (54%) Frame = +1 Query: 13 SLLP*KKHTFLFPFIRESITKTIINHNY*SNESFTHLVASLSIG 144 +L+ K HT + P I +++ I N+N+ N+ HL+ S G Sbjct: 489 NLMSIKMHTQIVPIIYPNLSNIITNYNFILNKYLNHLIISYQEG 532
>YQIG_BACSU (P54524) Probable NADH-dependent flavin oxidoreductase yqiG (EC| 1.-.-.-) Length = 372 Score = 30.4 bits (67), Expect = 1.1 Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 1/64 (1%) Frame = +1 Query: 181 GVEVGLAQLALLGEPLGETDERLFIGA-STVDGLIHPIGNGYPGYGLGEQILTDPNKRLH 357 G + ++ LL E +G + +G+ + D + I NG P +G +IL DPN + Sbjct: 271 GADPTRTRMDLLNERVGNKVPLIAVGSIHSADDALAVIENGIPLVAMGREILVDPNWTVK 330 Query: 358 VLFG 369 V G Sbjct: 331 VKEG 334
>MRAW_NOCFA (Q5YYY7) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)| Length = 324 Score = 29.3 bits (64), Expect = 2.4 Identities = 24/76 (31%), Positives = 34/76 (44%), Gaps = 5/76 (6%) Frame = +1 Query: 127 ASLSIGGRASSSLFS----SLLGVEVGLAQLALLGEPLGETDERLFIGASTVDGLIHPIG 294 A+L +GG A L L+G++ L L GE L ER+ + + DG+ +G Sbjct: 36 ATLGLGGHAEHFLTRYPGLRLVGLDRDTEALRLAGERLAPFAERITLVHTRYDGIADALG 95 Query: 295 N-GYPGYGLGEQILTD 339 G P G IL D Sbjct: 96 QAGLPPTGSVSAILMD 111
>AMYG_DEBOC (P22861) Glucoamylase 1 precursor (EC 3.2.1.3) (Glucan| 1,4-alpha-glucosidase) (1,4-alpha-D-glucan glucohydrolase) Length = 958 Score = 28.9 bits (63), Expect = 3.1 Identities = 12/30 (40%), Positives = 21/30 (70%) Frame = +2 Query: 197 WRSLRSSESLLAKRTNASSLVPAPSTVSYI 286 W+S++SS S AK ++ SS+ + ST+ Y+ Sbjct: 517 WKSIQSSISATAKTSSTSSVSSSSSTIDYM 546
>T2H1_HAEPH (P50191) Type II restriction enzyme HphI (EC 3.1.21.4)| (Endonuclease HphI) (R.HphI) Length = 379 Score = 28.9 bits (63), Expect = 3.1 Identities = 26/96 (27%), Positives = 40/96 (41%) Frame = +1 Query: 79 IINHNY*SNESFTHLVASLSIGGRASSSLFSSLLGVEVGLAQLALLGEPLGETDERLFIG 258 ++N NY + + + L + ++S L S+ G E G+P ET R I Sbjct: 37 LVNPNYTETDYSSVIYNELQMRLQSSPILQSTRKGFE---------GKPKNETSIRKSIN 87 Query: 259 ASTVDGLIHPIGNGYPGYGLGEQILTDPNKRLHVLF 366 G I+P GY E + T NK+ + LF Sbjct: 88 QLVKSGFINPFLTGYHSLA-KEYLQTKVNKKRNFLF 122
>TIG_MYCPA (Q73XM7) Trigger factor (TF)| Length = 464 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/56 (30%), Positives = 28/56 (50%) Frame = +1 Query: 166 FSSLLGVEVGLAQLALLGEPLGETDERLFIGASTVDGLIHPIGNGYPGYGLGEQIL 333 F +L GVE +A+ + L T + + +T GL H +G+G GL E ++ Sbjct: 149 FGTLTGVERPVAEGDFVSIDLSATIDGQEVPGATAQGLSHEVGSGRLIEGLDEALI 204
>Y2073_MYCTU (Q10681) Putative oxidoreductase Rv2073c/MT2133 (EC 1.-.-.-)| Length = 249 Score = 28.5 bits (62), Expect = 4.0 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 1/39 (2%) Frame = +1 Query: 79 IINHNY*SNESF-THLVASLSIGGRASSSLFSSLLGVEV 192 I++ +Y + S THL A++ GR S +FSS+ G+ V Sbjct: 110 IVHTDYVAQVSLLTHLAAAMRTAGRGSLVVFSSVAGIRV 148
>TPR1_SCHPO (O42668) Tetratricopeptide repeat protein 1| Length = 1039 Score = 28.5 bits (62), Expect = 4.0 Identities = 17/62 (27%), Positives = 32/62 (51%), Gaps = 4/62 (6%) Frame = -3 Query: 375 IATKENMEALIGIGKNLLTKTVSRVTIANGMY---ETVDGAGTNEEAFVRFAK-RLSEER 208 + +K+N E I + +N++ + S IA+G Y G NE+A + K + +++R Sbjct: 299 VYSKKNYEGCIKLAENVIQNSFSSSLIADGYYWMGRAYHQMGNNEKAMASYQKAKAADDR 358 Query: 207 KL 202 L Sbjct: 359 HL 360
>EDG5_MOUSE (P52592) Sphingosine 1-phosphate receptor Edg-5 (S1P receptor| Edg-5) (Lysophospholipid receptor B2) (Endothelial differentiation G-protein coupled receptor 5) (Sphingosine 1-phosphate receptor 2) (S1P2) Length = 352 Score = 28.5 bits (62), Expect = 4.0 Identities = 22/61 (36%), Positives = 35/61 (57%) Frame = +2 Query: 203 SLRSSESLLAKRTNASSLVPAPSTVSYIPLAMVTRDTVLVSRFLPIPISASMFSLVAIST 382 +L +S+ L A++L+ T+S P+ R+ VS F I +SAS+FSL+AI+ Sbjct: 74 NLAASDLLAGVAFVANTLLSGHVTLSLTPVQWFARE---VSAF--ITLSASVFSLLAIAI 128 Query: 383 E 385 E Sbjct: 129 E 129
>TOR2_SCHPO (Q9Y7K2) Phosphatidylinositol 3-kinase tor2 (EC 2.7.1.137)| (PtdIns-3-kinase tor2) (PI3-kinase tor2) (PI3K tor2) Length = 2337 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/31 (45%), Positives = 18/31 (58%) Frame = +2 Query: 194 VWRSLRSSESLLAKRTNASSLVPAPSTVSYI 286 +W RSSE+ L +RTN S + S V YI Sbjct: 2105 LWLKSRSSEAWLNRRTNYSRTLAVMSMVGYI 2135
>GPDA_STAHJ (Q4L6H9) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 332 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = +1 Query: 121 LVASLSIGGRASSSLFSSLLGVEVGLAQLALLGEPLGETDERLFIGASTVDGLI 282 +VA + G A ++L + GLA+++ LGE LG D F+G + LI Sbjct: 201 IVAGMGYGDNAKAALMTR------GLAEISRLGEKLG-ADPMTFLGLGGIGDLI 247
>GPDA_STAEQ (Q5HP71) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 332 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = +1 Query: 121 LVASLSIGGRASSSLFSSLLGVEVGLAQLALLGEPLGETDERLFIGASTVDGLI 282 +VA + G A ++L + GLA+++ LGE LG D F+G + LI Sbjct: 201 IVAGMGYGDNAKAALMTR------GLAEISRLGEKLG-ADPMTFLGLGGIGDLI 247
>GPDA_STAAW (Q8NWM9) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 332 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = +1 Query: 121 LVASLSIGGRASSSLFSSLLGVEVGLAQLALLGEPLGETDERLFIGASTVDGLI 282 +VA + G A ++L + GLA+++ LGE LG D F+G + LI Sbjct: 201 IVAGIGYGDNAKAALMTR------GLAEISRLGEKLG-ADPMTFLGLGGIGDLI 247
>GPDA_STAAS (Q6G989) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 332 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = +1 Query: 121 LVASLSIGGRASSSLFSSLLGVEVGLAQLALLGEPLGETDERLFIGASTVDGLI 282 +VA + G A ++L + GLA+++ LGE LG D F+G + LI Sbjct: 201 IVAGIGYGDNAKAALMTR------GLAEISRLGEKLG-ADPMTFLGLGGIGDLI 247
>GPDA_STAAR (Q6GGT7) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 332 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = +1 Query: 121 LVASLSIGGRASSSLFSSLLGVEVGLAQLALLGEPLGETDERLFIGASTVDGLI 282 +VA + G A ++L + GLA+++ LGE LG D F+G + LI Sbjct: 201 IVAGIGYGDNAKAALMTR------GLAEISRLGEKLG-ADPMTFLGLGGIGDLI 247
>GPDA_STAAN (P64191) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 332 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = +1 Query: 121 LVASLSIGGRASSSLFSSLLGVEVGLAQLALLGEPLGETDERLFIGASTVDGLI 282 +VA + G A ++L + GLA+++ LGE LG D F+G + LI Sbjct: 201 IVAGIGYGDNAKAALMTR------GLAEISRLGEKLG-ADPMTFLGLGGIGDLI 247
>GPDA_STAAM (P64190) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 332 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = +1 Query: 121 LVASLSIGGRASSSLFSSLLGVEVGLAQLALLGEPLGETDERLFIGASTVDGLI 282 +VA + G A ++L + GLA+++ LGE LG D F+G + LI Sbjct: 201 IVAGIGYGDNAKAALMTR------GLAEISRLGEKLG-ADPMTFLGLGGIGDLI 247
>GPDA_STAAC (Q5HFU9) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 332 Score = 28.1 bits (61), Expect = 5.3 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = +1 Query: 121 LVASLSIGGRASSSLFSSLLGVEVGLAQLALLGEPLGETDERLFIGASTVDGLI 282 +VA + G A ++L + GLA+++ LGE LG D F+G + LI Sbjct: 201 IVAGIGYGDNAKAALMTR------GLAEISRLGEKLG-ADPMTFLGLGGIGDLI 247
>P29_MYCGE (P47532) Probable ABC transporter ATP-binding protein p29| Length = 245 Score = 28.1 bits (61), Expect = 5.3 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 2/61 (3%) Frame = -3 Query: 393 QTSSVDIATKENMEAL--IGIGKNLLTKTVSRVTIANGMYETVDGAGTNEEAFVRFAKRL 220 Q S + KEN+ L G+GK+ L +V+ I DG +N++ + + K+ Sbjct: 23 QNISFKVMAKENVCLLGKSGVGKSSLLNSVTNTKIVKSGLVYFDGVASNKKEYKKLKKQC 82 Query: 219 S 217 S Sbjct: 83 S 83
>IF2M_MOUSE (Q91YJ5) Translation initiation factor IF-2, mitochondrial| precursor (IF-2Mt) (IF-2(Mt)) Length = 727 Score = 28.1 bits (61), Expect = 5.3 Identities = 13/30 (43%), Positives = 16/30 (53%) Frame = +3 Query: 240 RTPLHWCQHRRRSHTSHWQWLPGIRSW*AD 329 R L WC+H +S W+ L G RSW D Sbjct: 27 RRLLAWCRHGFAPASSVWRDLLGARSWQTD 56
>BIOA_BUCAP (Q8K9P0) Adenosylmethionine-8-amino-7-oxononanoate aminotransferase| (EC 2.6.1.62) (7,8-diamino-pelargonic acid aminotransferase) (DAPA aminotransferase) Length = 432 Score = 27.7 bits (60), Expect = 6.9 Identities = 26/120 (21%), Positives = 46/120 (38%), Gaps = 9/120 (7%) Frame = +1 Query: 34 HTFLFPFIRESITKTIINHNY*SNESFTHLVASL------SIGGRASSSLF---SSLLGV 186 H + P + +S+ K I ++ TH A L + + +F S + + Sbjct: 57 HGYNHPILNKSLKKQIRKMSHVMFGGITHPSAILLCRKLLKLTPKKLDCVFLSDSGSIAI 116 Query: 187 EVGLAQLALLGEPLGETDERLFIGASTVDGLIHPIGNGYPGYGLGEQILTDPNKRLHVLF 366 EV + L E LG+ ++ I NGY G ++DPN +H ++ Sbjct: 117 EVAIKMLIQYWEALGQKRTQILT-----------IKNGYHGDTFSAMSISDPNNSMHKIY 165
>POL2_GCMV (P13026) RNA2 polyprotein (P2) [Contains: P2A protein (2A);| Movement protein (2B-MP); Coat protein (2C-CP)] Length = 1324 Score = 27.7 bits (60), Expect = 6.9 Identities = 11/27 (40%), Positives = 17/27 (62%) Frame = -1 Query: 389 RPRWISPPKRTWRRLLGSVRICSPRPY 309 R RW+ +TWR +LG V+ C+P + Sbjct: 205 RLRWL----KTWRHVLGDVKPCTPEKW 227
>Y348_METJA (Q57794) Hypothetical protein MJ0348| Length = 795 Score = 27.7 bits (60), Expect = 6.9 Identities = 13/35 (37%), Positives = 20/35 (57%) Frame = -3 Query: 300 TIANGMYETVDGAGTNEEAFVRFAKRLSEERKLRQ 196 T+ N +YETV G N ++L+E+R L+Q Sbjct: 658 TLLNQVYETVSGTFVNPICEFSVVEQLNEDRDLKQ 692
>PAPOA_BOVIN (P25500) Poly(A) polymerase alpha (EC 2.7.7.19) (PAP)| (Polynucleotide adenylyltransferase alpha) Length = 738 Score = 27.3 bits (59), Expect = 9.0 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -1 Query: 389 RPRWISPPKRTWRRLLGSVRICSPRPYP 306 +P SPPK T R++ S R+ +P P P Sbjct: 600 QPAISSPPKPTVSRVVSSTRLVNPPPRP 627
>NORM_PASMU (Q9CMZ9) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 464 Score = 27.3 bits (59), Expect = 9.0 Identities = 17/40 (42%), Positives = 24/40 (60%) Frame = +1 Query: 115 THLVASLSIGGRASSSLFSSLLGVEVGLAQLALLGEPLGE 234 T +VAS I SS LF +L + +G+A L+G+ LGE Sbjct: 273 TDIVASHQIALNTSSFLF--MLPMSLGMAATILVGQRLGE 310
>NU2M_PODAN (P15578) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH| dehydrogenase subunit 2) Length = 556 Score = 27.3 bits (59), Expect = 9.0 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = +1 Query: 43 LFPFIRESITKTIINHNY*SNESFTHLVASLSIGGRASSSLFSSLLGVEVGLAQLAL 213 +F F+ E + T +NY S S+T+L+ SSLFS ++G VGL Q + Sbjct: 284 IFIFLLELVYHT---NNYLSEFSWTYLLLI--------SSLFSLIIGTVVGLTQFRI 329
>NORM_MANSM (Q65SY9) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 465 Score = 27.3 bits (59), Expect = 9.0 Identities = 21/60 (35%), Positives = 30/60 (50%), Gaps = 9/60 (15%) Frame = +1 Query: 115 THLVASLSIGGRASSSLFSSLLGVEVGLAQLALLGEPLGETDE---------RLFIGAST 267 T+ VAS I SS +F +L + +G+A L+G+ LGE LFIG +T Sbjct: 274 TNAVASHQIALNTSSFIF--MLPMSLGMATTILVGQSLGERSPLKAKDISYVALFIGLAT 331
>GPDA_STAES (Q8CP63) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 332 Score = 27.3 bits (59), Expect = 9.0 Identities = 18/54 (33%), Positives = 28/54 (51%) Frame = +1 Query: 121 LVASLSIGGRASSSLFSSLLGVEVGLAQLALLGEPLGETDERLFIGASTVDGLI 282 +VA + G A ++L + GLA+++ LGE LG D F+G + LI Sbjct: 201 IVAGMGWGDNAKAALMTR------GLAEISRLGEKLG-ADPMTFLGLGGIGDLI 247
>OTCC_HALSA (Q48296) Ornithine carbamoyltransferase, catabolic (EC 2.1.3.3)| (OTCase) Length = 295 Score = 27.3 bits (59), Expect = 9.0 Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%) Frame = -3 Query: 375 IATKENMEALIGIGKNLLTKTVSRVTIANGMYETVDGA-GTNEEAFVRFAKRLSEERKLR 199 IAT E ME I + + + VT+ N YE VDGA + FV + E KL Sbjct: 173 IATPEGMEPDEEIQDRV---SDANVTVTNDPYEAVDGATAVYGDVFVSMGEEEQREEKLA 229 Query: 198 Q 196 + Sbjct: 230 E 230
>EXOC1_DROME (Q9VVG4) Probable exocyst complex component 1 (Exocyst complex| component Sec3) Length = 889 Score = 27.3 bits (59), Expect = 9.0 Identities = 14/46 (30%), Positives = 23/46 (50%) Frame = +1 Query: 232 ETDERLFIGASTVDGLIHPIGNGYPGYGLGEQILTDPNKRLHVLFG 369 E ++ + + S + G + P G+G P + QI D K + LFG Sbjct: 541 EMEKAVDMTQSIISGAVSPSGDGVPQKRIDRQINEDVRKLMMGLFG 586 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 60,681,046 Number of Sequences: 219361 Number of extensions: 1281249 Number of successful extensions: 3750 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 3660 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3742 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 1365190992 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
