ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart42f07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK103447.1| Oryza sativa (japonica cultivar-group) cDNA clon... 301 6e-79
2dbj|AK062015.1| Oryza sativa (japonica cultivar-group) cDNA clon... 301 6e-79
3gb|AY112048.1| Zea mays CL10197_1 mRNA sequence 196 3e-47
4dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 170 2e-39
5dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic D... 170 2e-39
6ref|NM_122099.2| Arabidopsis thaliana protein binding / ubiquiti... 50 0.004
7gb|BT000238.1| Arabidopsis thaliana ABI3-interacting protein 2 (... 50 0.004
8emb|AJ251087.1|ATH251087 Arabidopsis thaliana mRNA for ABI3-inte... 50 0.004
9gb|AY081329.1| Arabidopsis thaliana ABI3-interacting protein 2 (... 50 0.004
10gb|DQ059130.1| Arabidopsis thaliana RING finger family protein (... 50 0.004
11gb|AY089089.1| Arabidopsis thaliana clone 30983 mRNA, complete s... 50 0.004
12gb|BC038063.1| Mus musculus Braf transforming gene, mRNA (cDNA c... 48 0.016
13gb|AC163109.5| Mus musculus 6 BAC RP23-172E18 (Roswell Park Canc... 48 0.016
14dbj|AK046760.1| Mus musculus 4 days neonate thymus cDNA, RIKEN f... 48 0.016
15gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1 48 0.016
16gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome... 46 0.061
17gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome... 46 0.061
18dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.061
19emb|BX832438.1|CNS09YTJ Arabidopsis thaliana Full-length cDNA Co... 46 0.061
20gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 46 0.061
21gb|AC122350.4| Mus musculus BAC clone RP23-383P18 from chromosom... 44 0.24
22gb|AC099663.2| Genomic sequence for Mus musculus, clone RP23-36G... 44 0.24
23emb|AL928932.14| Mouse DNA sequence from clone RP24-235B14 on ch... 44 0.24
24gb|U53456.1|MMU53456 Mus musculus protein phosphatase 1cgamma (P... 44 0.24
25emb|CR859188.1| Pongo pygmaeus mRNA; cDNA DKFZp459F1725 (from cl... 42 0.96
26gb|BC085496.1| Mus musculus protein phosphatase 1, catalytic sub... 40 3.8
27gb|AC159972.5| Mus musculus chromosome 1, clone RP23-35D23, comp... 40 3.8
28gb|AC093473.6| Mus musculus chromosome 5, clone RP23-54H12, comp... 40 3.8
29gb|AC127266.4| Mus musculus BAC clone RP24-347B12 from chromosom... 40 3.8
30gb|BC021646.1| Mus musculus protein phosphatase 1, catalytic sub... 40 3.8
31ref|XR_005184.1| PREDICTED: Mus musculus similar to protein phos... 40 3.8
32ref|XR_005183.1| PREDICTED: Mus musculus similar to protein phos... 40 3.8
33ref|XR_005187.1| PREDICTED: Mus musculus similar to protein phos... 40 3.8
34ref|XR_005181.1| PREDICTED: Mus musculus similar to protein phos... 40 3.8
35ref|XR_005186.1| PREDICTED: Mus musculus similar to protein phos... 40 3.8
36ref|XR_005185.1| PREDICTED: Mus musculus similar to protein phos... 40 3.8
37ref|XR_005182.1| PREDICTED: Mus musculus similar to protein phos... 40 3.8
38ref|XM_001003263.1| PREDICTED: Mus musculus similar to protein p... 40 3.8
39ref|XR_004574.1| PREDICTED: Mus musculus similar to protein phos... 40 3.8
40ref|XR_002358.1| PREDICTED: Mus musculus similar to protein phos... 40 3.8
41ref|XR_002356.1| PREDICTED: Mus musculus similar to protein phos... 40 3.8
42ref|XR_002357.1| PREDICTED: Mus musculus similar to protein phos... 40 3.8
43ref|XR_002361.1| PREDICTED: Mus musculus similar to protein phos... 40 3.8
44ref|XR_002362.1| PREDICTED: Mus musculus similar to protein phos... 40 3.8
45ref|XR_002359.1| PREDICTED: Mus musculus similar to protein phos... 40 3.8
46ref|XR_002363.1| PREDICTED: Mus musculus similar to protein phos... 40 3.8
47gb|AC131700.3| Mus musculus BAC clone RP24-67N3 from chromosome ... 40 3.8
48ref|NM_013636.2| Mus musculus protein phosphatase 1, catalytic s... 40 3.8
49gb|AC122423.2| Mus musculus BAC clone RP24-171N18 from 7, comple... 40 3.8
50gb|AC153663.6| Mus musculus BAC clone RP23-12J8 from chromosome ... 40 3.8
51gb|AC164158.3| Mus musculus BAC clone RP24-263G24 from chromosom... 40 3.8
52gb|BC039972.1| Mus musculus mRNA similar to protein phosphatase ... 40 3.8
53gb|BC008157.1| Mus musculus cDNA clone IMAGE:3711560, **** WARNI... 40 3.8
54gb|AC102570.8| Mus musculus, clone RP23-228G18, complete sequence 40 3.8
55emb|AL358154.8| Human DNA sequence from clone RP11-512J3 on chro... 40 3.8
56dbj|AK147131.1| Mus musculus 16 days embryo kidney cDNA, RIKEN f... 40 3.8
57dbj|AK152625.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 3.8
58dbj|AK152422.1| Mus musculus bone marrow macrophage cDNA, RIKEN ... 40 3.8
59dbj|AK169336.1| Mus musculus 16 days embryo kidney cDNA, RIKEN f... 40 3.8
60dbj|AK076009.1| Mus musculus 10 days embryo whole body cDNA, RIK... 40 3.8
61gb|AC022364.28|AC022364 Homo sapiens 12 BAC RP11-967K21 (Roswell... 40 3.8
62gb|AF035008.1|RNMGLUR5S1 Rattus norvegicus metabotropic glutamat... 40 3.8
63emb|AL121992.24|HSDJ680D5 Human DNA sequence from clone RP4-680D... 40 3.8
64gb|AC132587.5| Mus musculus BAC clone RP24-372N16 from 12, compl... 40 3.8
65emb|AL928681.5| Mouse DNA sequence from clone RP23-82M15 on chro... 40 3.8
66emb|AL732492.11| Mouse DNA sequence from clone RP23-307C17 on ch... 40 3.8
67emb|AL591763.14| Mouse DNA sequence from clone RP23-480D17 on ch... 40 3.8 
>dbj|AK103447.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033129G15, full
            insert sequence
          Length = 1349

 Score =  301 bits (152), Expect = 6e-79
 Identities = 251/284 (88%)
 Strand = Plus / Minus

                                                                        
Query: 1    aactccccacccctgacagcattggccgctcccttcctggcttcctcctcctctcgctca 60
            ||||||||||||||||||||||| || || ||||||||| |||||||||| |||||||| 
Sbjct: 1181 aactccccacccctgacagcattcgcggcgcccttcctgtcttcctcctcttctcgctcc 1122

                                                                        
Query: 61   cgctccttccgggtctcatacgcatgggcgtccgtcctcagctcgtgccggcagatcggg 120
            |||||||||||| |||| ||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 1121 cgctccttccggctctcgtacacatggtcgtccgtcctcagctcgtgccggcagatcggg 1062

                                                                        
Query: 121  catgagttgctctcatccagccacggcttgaggcaaggaggatggaaaaggtgcttgcac 180
            || |||||| |||| |||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 1061 caggagttgttctcgtccagccatggcttgaggcatggagggtggaaaagatgcttgcac 1002

                                                                        
Query: 181  ggcagctcctgcatcttgtcatccacaaccaagttttcccggcaaacagcacactcagtc 240
            || ||||||||||||||||| ||||| | |||| | ||||||||||||||||||| ||||
Sbjct: 1001 ggtagctcctgcatcttgtcgtccaccagcaagctctcccggcaaacagcacactgagtc 942

                                                        
Query: 241  tcgctgcccagcctagcaatgacttcttcagtaacagttacaac 284
            ||  ||||||  ||||| |||| |||||| || || ||||||||
Sbjct: 941  tctttgcccaatctagctatgatttcttctgtcacggttacaac 898
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>dbj|AK062015.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-F05, full
            insert sequence
          Length = 1232

 Score =  301 bits (152), Expect = 6e-79
 Identities = 251/284 (88%)
 Strand = Plus / Minus

                                                                        
Query: 1    aactccccacccctgacagcattggccgctcccttcctggcttcctcctcctctcgctca 60
            ||||||||||||||||||||||| || || ||||||||| |||||||||| |||||||| 
Sbjct: 1046 aactccccacccctgacagcattcgcggcgcccttcctgtcttcctcctcttctcgctcc 987

                                                                        
Query: 61   cgctccttccgggtctcatacgcatgggcgtccgtcctcagctcgtgccggcagatcggg 120
            |||||||||||| |||| ||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 986  cgctccttccggctctcgtacacatggtcgtccgtcctcagctcgtgccggcagatcggg 927

                                                                        
Query: 121  catgagttgctctcatccagccacggcttgaggcaaggaggatggaaaaggtgcttgcac 180
            || |||||| |||| |||||||| ||||||||||| ||||| |||||||| |||||||||
Sbjct: 926  caggagttgttctcgtccagccatggcttgaggcatggagggtggaaaagatgcttgcac 867

                                                                        
Query: 181  ggcagctcctgcatcttgtcatccacaaccaagttttcccggcaaacagcacactcagtc 240
            || ||||||||||||||||| ||||| | |||| | ||||||||||||||||||| ||||
Sbjct: 866  ggtagctcctgcatcttgtcgtccaccagcaagctctcccggcaaacagcacactgagtc 807

                                                        
Query: 241  tcgctgcccagcctagcaatgacttcttcagtaacagttacaac 284
            ||  ||||||  ||||| |||| |||||| || || ||||||||
Sbjct: 806  tctttgcccaatctagctatgatttcttctgtcacggttacaac 763
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>gb|AY112048.1| Zea mays CL10197_1 mRNA sequence
          Length = 518

 Score =  196 bits (99), Expect = 3e-47
 Identities = 186/215 (86%)
 Strand = Plus / Plus

                                                                       
Query: 63  ctccttccgggtctcatacgcatgggcgtccgtcctcagctcgtgccggcagatcgggca 122
           |||||||| | |||||||| ||||| | |||||||||||||| ||||||||||| |||||
Sbjct: 163 ctccttcctgctctcatacacatggtcatccgtcctcagctcatgccggcagatagggca 222

                                                                       
Query: 123 tgagttgctctcatccagccacggcttgaggcaaggaggatggaaaaggtgcttgcacgg 182
            |||||| |||| |||||||| ||||| || ||| |||||||||| || |||||||| ||
Sbjct: 223 ggagttgttctcgtccagccatggcttcagacaaagaggatggaagagatgcttgcaggg 282

                                                                       
Query: 183 cagctcctgcatcttgtcatccacaaccaagttttcccggcaaacagcacactcagtctc 242
            ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||
Sbjct: 283 aagctcctgcatcttgtcatccacaaccaagttttcgcggcagacagcacactccgtctc 342

                                              
Query: 243 gctgcccagcctagcaatgacttcttcagtaacag 277
            || ||||  ||||  |||||||| || |||||||
Sbjct: 343 actacccaatctagacatgacttcctcggtaacag 377
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  170 bits (86), Expect = 2e-39
 Identities = 122/134 (91%)
 Strand = Plus / Plus

                                                                            
Query: 1        aactccccacccctgacagcattggccgctcccttcctggcttcctcctcctctcgctca 60
                ||||||||||||||||||||||| || || ||||||||| |||||||||| |||||||| 
Sbjct: 15890098 aactccccacccctgacagcattcgcggcgcccttcctgtcttcctcctcttctcgctcc 15890157

                                                                            
Query: 61       cgctccttccgggtctcatacgcatgggcgtccgtcctcagctcgtgccggcagatcggg 120
                |||||||||||| |||| ||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 15890158 cgctccttccggctctcgtacacatggtcgtccgtcctcagctcgtgccggcagatcggg 15890217

                              
Query: 121      catgagttgctctc 134
                || |||||| ||||
Sbjct: 15890218 caggagttgttctc 15890231



 Score =  135 bits (68), Expect = 9e-29
 Identities = 128/148 (86%)
 Strand = Plus / Plus

                                                                            
Query: 137      ccagccacggcttgaggcaaggaggatggaaaaggtgcttgcacggcagctcctgcatct 196
                ||||||| ||||||||||| ||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 15890344 ccagccatggcttgaggcatggagggtggaaaagatgcttgcacggtagctcctgcatct 15890403

                                                                            
Query: 197      tgtcatccacaaccaagttttcccggcaaacagcacactcagtctcgctgcccagcctag 256
                |||| ||||| | |||| | ||||||||||||||||||| ||||||  ||||||  ||||
Sbjct: 15890404 tgtcgtccaccagcaagctctcccggcaaacagcacactgagtctctttgcccaatctag 15890463

                                            
Query: 257      caatgacttcttcagtaacagttacaac 284
                | |||| |||||| || || ||||||||
Sbjct: 15890464 ctatgatttcttctgtcacggttacaac 15890491
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>dbj|AP005551.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1081_G10
          Length = 107955

 Score =  170 bits (86), Expect = 2e-39
 Identities = 122/134 (91%)
 Strand = Plus / Plus

                                                                         
Query: 1     aactccccacccctgacagcattggccgctcccttcctggcttcctcctcctctcgctca 60
             ||||||||||||||||||||||| || || ||||||||| |||||||||| |||||||| 
Sbjct: 53224 aactccccacccctgacagcattcgcggcgcccttcctgtcttcctcctcttctcgctcc 53283

                                                                         
Query: 61    cgctccttccgggtctcatacgcatgggcgtccgtcctcagctcgtgccggcagatcggg 120
             |||||||||||| |||| ||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 53284 cgctccttccggctctcgtacacatggtcgtccgtcctcagctcgtgccggcagatcggg 53343

                           
Query: 121   catgagttgctctc 134
             || |||||| ||||
Sbjct: 53344 caggagttgttctc 53357



 Score =  135 bits (68), Expect = 9e-29
 Identities = 128/148 (86%)
 Strand = Plus / Plus

                                                                         
Query: 137   ccagccacggcttgaggcaaggaggatggaaaaggtgcttgcacggcagctcctgcatct 196
             ||||||| ||||||||||| ||||| |||||||| ||||||||||| |||||||||||||
Sbjct: 53470 ccagccatggcttgaggcatggagggtggaaaagatgcttgcacggtagctcctgcatct 53529

                                                                         
Query: 197   tgtcatccacaaccaagttttcccggcaaacagcacactcagtctcgctgcccagcctag 256
             |||| ||||| | |||| | ||||||||||||||||||| ||||||  ||||||  ||||
Sbjct: 53530 tgtcgtccaccagcaagctctcccggcaaacagcacactgagtctctttgcccaatctag 53589

                                         
Query: 257   caatgacttcttcagtaacagttacaac 284
             | |||| |||||| || || ||||||||
Sbjct: 53590 ctatgatttcttctgtcacggttacaac 53617
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>ref|NM_122099.2| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
           zinc ion binding AT5G20910 mRNA, complete cds
          Length = 1494

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 136 tccagccacggcttgaggcaaggaggatggaaaaggtgcttgcacggcagctcctgcatc 195
           |||||||| ||||| ||||||||||| || ||   ||||||||| ||||  |||||||||
Sbjct: 921 tccagccaaggctttaggcaaggagggtgaaatgtgtgcttgcatggcaattcctgcatc 862

                
Query: 196 ttgtc 200
           |||||
Sbjct: 861 ttgtc 857
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>gb|BT000238.1| Arabidopsis thaliana ABI3-interacting protein 2 (At5g20910) mRNA,
           complete cds
          Length = 994

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 136 tccagccacggcttgaggcaaggaggatggaaaaggtgcttgcacggcagctcctgcatc 195
           |||||||| ||||| ||||||||||| || ||   ||||||||| ||||  |||||||||
Sbjct: 785 tccagccaaggctttaggcaaggagggtgaaatgtgtgcttgcatggcaattcctgcatc 726

                
Query: 196 ttgtc 200
           |||||
Sbjct: 725 ttgtc 721
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>emb|AJ251087.1|ATH251087 Arabidopsis thaliana mRNA for ABI3-interacting protein 2, AIP2
           (aip2 gene)
          Length = 1168

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 136 tccagccacggcttgaggcaaggaggatggaaaaggtgcttgcacggcagctcctgcatc 195
           |||||||| ||||| ||||||||||| || ||   ||||||||| ||||  |||||||||
Sbjct: 877 tccagccaaggctttaggcaaggagggtgaaatgtgtgcttgcatggcaattcctgcatc 818

                
Query: 196 ttgtc 200
           |||||
Sbjct: 817 ttgtc 813
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>gb|AY081329.1| Arabidopsis thaliana ABI3-interacting protein 2 (At5g20910) mRNA,
           complete cds
          Length = 1215

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 136 tccagccacggcttgaggcaaggaggatggaaaaggtgcttgcacggcagctcctgcatc 195
           |||||||| ||||| ||||||||||| || ||   ||||||||| ||||  |||||||||
Sbjct: 917 tccagccaaggctttaggcaaggagggtgaaatgtgtgcttgcatggcaattcctgcatc 858

                
Query: 196 ttgtc 200
           |||||
Sbjct: 857 ttgtc 853
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>gb|DQ059130.1| Arabidopsis thaliana RING finger family protein (At5g20910) mRNA,
           complete cds
          Length = 933

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 136 tccagccacggcttgaggcaaggaggatggaaaaggtgcttgcacggcagctcctgcatc 195
           |||||||| ||||| ||||||||||| || ||   ||||||||| ||||  |||||||||
Sbjct: 785 tccagccaaggctttaggcaaggagggtgaaatgtgtgcttgcatggcaattcctgcatc 726

                
Query: 196 ttgtc 200
           |||||
Sbjct: 725 ttgtc 721
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>gb|AY089089.1| Arabidopsis thaliana clone 30983 mRNA, complete sequence
          Length = 1156

 Score = 50.1 bits (25), Expect = 0.004
 Identities = 55/65 (84%)
 Strand = Plus / Minus

                                                                       
Query: 136 tccagccacggcttgaggcaaggaggatggaaaaggtgcttgcacggcagctcctgcatc 195
           |||||||| ||||| ||||||||||| || ||   ||||||||| ||||  |||||||||
Sbjct: 921 tccagccaaggctttaggcaaggagggtgaaatgtgtgcttgcatggcaattcctgcatc 862

                
Query: 196 ttgtc 200
           |||||
Sbjct: 861 ttgtc 857
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>gb|BC038063.1| Mus musculus Braf transforming gene, mRNA (cDNA clone
           IMAGE:4486375), partial cds
          Length = 1122

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 27  cgctcccttcctggcttcctcctc 50
           ||||||||||||||||||||||||
Sbjct: 745 cgctcccttcctggcttcctcctc 768
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>gb|AC163109.5| Mus musculus 6 BAC RP23-172E18 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 199216

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 27    cgctcccttcctggcttcctcctc 50
             ||||||||||||||||||||||||
Sbjct: 27076 cgctcccttcctggcttcctcctc 27053
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>dbj|AK046760.1| Mus musculus 4 days neonate thymus cDNA, RIKEN full-length enriched
            library, clone:B630013K21 product:unclassifiable, full
            insert sequence
          Length = 2508

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 27   cgctcccttcctggcttcctcctc 50
            ||||||||||||||||||||||||
Sbjct: 1329 cgctcccttcctggcttcctcctc 1352
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>gb|AF296834.1|F22D1 Arabidopsis thaliana BAC F22D1
          Length = 96102

 Score = 48.1 bits (24), Expect = 0.016
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                         
Query: 137   ccagccacggcttgaggcaaggaggatggaaaaggtgcttgcacggcagctcctgcatct 196
             ||||||| ||||| ||||||||||| || ||   ||||||||| ||||  ||||||||||
Sbjct: 36585 ccagccaaggctttaggcaaggagggtgaaatgtgtgcttgcatggcaattcctgcatct 36644

                 
Query: 197   tgtc 200
             ||||
Sbjct: 36645 tgtc 36648
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>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0038F07, complete sequence
          Length = 175703

 Score = 46.1 bits (23), Expect = 0.061
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                        
Query: 31    cccttcctggcttcctcctcctctcgc 57
             ||||||||||| |||||||||||||||
Sbjct: 18625 cccttcctggcctcctcctcctctcgc 18599
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>gb|AC108223.5| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0019A16,
              complete sequence
          Length = 175425

 Score = 46.1 bits (23), Expect = 0.061
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                         
Query: 31     cccttcctggcttcctcctcctctcgc 57
              ||||||||||| |||||||||||||||
Sbjct: 168862 cccttcctggcctcctcctcctctcgc 168836
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 46.1 bits (23), Expect = 0.061
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 31       cccttcctggcttcctcctcctctcgc 57
                ||||||||||| |||||||||||||||
Sbjct: 19300074 cccttcctggcctcctcctcctctcgc 19300048
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>emb|BX832438.1|CNS09YTJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH73ZA09 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1371

 Score = 46.1 bits (23), Expect = 0.061
 Identities = 53/63 (84%)
 Strand = Plus / Minus

                                                                        
Query: 138  cagccacggcttgaggcaaggaggatggaaaaggtgcttgcacggcagctcctgcatctt 197
            |||||| ||||| ||||||||||| || ||   ||||||||| ||||  |||||||||||
Sbjct: 1165 cagccaaggctttaggcaaggagggtgaaatgtgtgcttgcatggcaattcctgcatctt 1106

               
Query: 198  gtc 200
            |||
Sbjct: 1105 gtc 1103
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 46.1 bits (23), Expect = 0.061
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                           
Query: 31       cccttcctggcttcctcctcctctcgc 57
                ||||||||||| |||||||||||||||
Sbjct: 19459623 cccttcctggcctcctcctcctctcgc 19459597
to top
>gb|AC122350.4| Mus musculus BAC clone RP23-383P18 from chromosome 17, complete sequence
          Length = 198521

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 35     tcctggcttcctcctcctctcg 56
              ||||||||||||||||||||||
Sbjct: 147610 tcctggcttcctcctcctctcg 147589
to top
>gb|AC099663.2| Genomic sequence for Mus musculus, clone RP23-36G7, from chromosome 17,
             complete sequence
          Length = 78389

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 35    tcctggcttcctcctcctctcg 56
             ||||||||||||||||||||||
Sbjct: 73922 tcctggcttcctcctcctctcg 73901
to top
>emb|AL928932.14| Mouse DNA sequence from clone RP24-235B14 on chromosome 4, complete
            sequence
          Length = 201761

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 150  gaggcaaggaggatggaaaagg 171
            ||||||||||||||||||||||
Sbjct: 4344 gaggcaaggaggatggaaaagg 4365
to top
>gb|U53456.1|MMU53456 Mus musculus protein phosphatase 1cgamma (PP1cgamma) mRNA,
          complete cds
          Length = 2294

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                            
Query: 24 ggccgctcccttcctggcttcctcctcctctcgc 57
          |||||||||  ||| |||||||||||||||||||
Sbjct: 35 ggccgctccgctccgggcttcctcctcctctcgc 2
to top
>emb|CR859188.1| Pongo pygmaeus mRNA; cDNA DKFZp459F1725 (from clone DKFZp459F1725)
          Length = 3921

 Score = 42.1 bits (21), Expect = 0.96
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 2    actccccacccctgacagcat 22
            |||||||||||||||||||||
Sbjct: 2427 actccccacccctgacagcat 2407
to top
>gb|BC085496.1| Mus musculus protein phosphatase 1, catalytic subunit, gamma
          isoform, mRNA (cDNA clone MGC:102084 IMAGE:6829867),
          complete cds
          Length = 1809

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 49 ccgctccgctccgggcttcctcctcctctcgc 18
to top
>gb|AC159972.5| Mus musculus chromosome 1, clone RP23-35D23, complete sequence
          Length = 199094

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tcctggcttcctcctcctct 54
             ||||||||||||||||||||
Sbjct: 48827 tcctggcttcctcctcctct 48846
to top
>gb|AC093473.6| Mus musculus chromosome 5, clone RP23-54H12, complete sequence
          Length = 208876

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 26     ccgctcccttcctggcttcctcctcctctcgc 57
              |||||||  ||| |||||||||||||||||||
Sbjct: 195489 ccgctccgctccgggcttcctcctcctctcgc 195520
to top
>gb|AC127266.4| Mus musculus BAC clone RP24-347B12 from chromosome 5, complete sequence
          Length = 185232

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 26     ccgctcccttcctggcttcctcctcctctcgc 57
              |||||||  ||| |||||||||||||||||||
Sbjct: 128389 ccgctccgctccgggcttcctcctcctctcgc 128420
to top
>gb|BC021646.1| Mus musculus protein phosphatase 1, catalytic subunit, gamma
           isoform, mRNA (cDNA clone MGC:13976 IMAGE:3487479),
           complete cds
          Length = 2393

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 26  ccgctcccttcctggcttcctcctcctctcgc 57
           |||||||  ||| |||||||||||||||||||
Sbjct: 111 ccgctccgctccgggcttcctcctcctctcgc 80
to top
>ref|XR_005184.1| PREDICTED: Mus musculus similar to protein phosphatase 1 gamma2,
          transcript variant 5 (LOC434233), misc RNA
          Length = 2208

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 45 ccgctccgctccgggcttcctcctcctctcgc 14
to top
>ref|XR_005183.1| PREDICTED: Mus musculus similar to protein phosphatase 1 gamma2,
          transcript variant 4 (LOC434233), misc RNA
          Length = 2240

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 56 ccgctccgctccgggcttcctcctcctctcgc 25
to top
>ref|XR_005187.1| PREDICTED: Mus musculus similar to protein phosphatase 1 gamma2,
          transcript variant 8 (LOC434233), misc RNA
          Length = 2252

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 56 ccgctccgctccgggcttcctcctcctctcgc 25
to top
>ref|XR_005181.1| PREDICTED: Mus musculus similar to protein phosphatase 1 gamma2,
          transcript variant 2 (LOC434233), misc RNA
          Length = 2345

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 56 ccgctccgctccgggcttcctcctcctctcgc 25
to top
>ref|XR_005186.1| PREDICTED: Mus musculus similar to protein phosphatase 1 gamma2,
          transcript variant 7 (LOC434233), misc RNA
          Length = 2249

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 56 ccgctccgctccgggcttcctcctcctctcgc 25
to top
>ref|XR_005185.1| PREDICTED: Mus musculus similar to protein phosphatase 1 gamma2,
          transcript variant 6 (LOC434233), misc RNA
          Length = 1369

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 56 ccgctccgctccgggcttcctcctcctctcgc 25
to top
>ref|XR_005182.1| PREDICTED: Mus musculus similar to protein phosphatase 1 gamma2,
          transcript variant 3 (LOC434233), misc RNA
          Length = 1477

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 56 ccgctccgctccgggcttcctcctcctctcgc 25
to top
>ref|XM_001003263.1| PREDICTED: Mus musculus similar to protein phosphatase 1,
          catalytic subunit, gamma isoform (LOC668714), mRNA
          Length = 1792

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 49 ccgctccgctccgggcttcctcctcctctcgc 18
to top
>ref|XR_004574.1| PREDICTED: Mus musculus similar to protein phosphatase 1 gamma2
          (LOC434233), misc RNA
          Length = 1481

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 56 ccgctccgctccgggcttcctcctcctctcgc 25
to top
>ref|XR_002358.1| PREDICTED: Mus musculus similar to protein phosphatase 1 gamma2,
          transcript variant 3 (LOC434233), misc RNA
          Length = 2207

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 45 ccgctccgctccgggcttcctcctcctctcgc 14
to top
>ref|XR_002356.1| PREDICTED: Mus musculus similar to protein phosphatase 1 gamma2,
          transcript variant 1 (LOC434233), misc RNA
          Length = 2239

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 56 ccgctccgctccgggcttcctcctcctctcgc 25
to top
>ref|XR_002357.1| PREDICTED: Mus musculus similar to protein phosphatase 1 gamma2,
          transcript variant 2 (LOC434233), misc RNA
          Length = 2251

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 56 ccgctccgctccgggcttcctcctcctctcgc 25
to top
>ref|XR_002361.1| PREDICTED: Mus musculus similar to protein phosphatase 1 gamma2,
          transcript variant 6 (LOC434233), misc RNA
          Length = 2344

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 56 ccgctccgctccgggcttcctcctcctctcgc 25
to top
>ref|XR_002362.1| PREDICTED: Mus musculus similar to protein phosphatase 1 gamma2,
          transcript variant 7 (LOC434233), misc RNA
          Length = 2248

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 56 ccgctccgctccgggcttcctcctcctctcgc 25
to top
>ref|XR_002359.1| PREDICTED: Mus musculus similar to protein phosphatase 1 gamma2,
          transcript variant 4 (LOC434233), misc RNA
          Length = 1369

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 56 ccgctccgctccgggcttcctcctcctctcgc 25
to top
>ref|XR_002363.1| PREDICTED: Mus musculus similar to protein phosphatase 1 gamma2,
          transcript variant 8 (LOC434233), misc RNA
          Length = 1477

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 56 ccgctccgctccgggcttcctcctcctctcgc 25
to top
>gb|AC131700.3| Mus musculus BAC clone RP24-67N3 from chromosome 6, complete sequence
          Length = 197050

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 29    ctcccttcctggcttcctcctcct 52
             |||||||||| |||||||||||||
Sbjct: 87394 ctcccttccttgcttcctcctcct 87371
to top
>ref|NM_013636.2| Mus musculus protein phosphatase 1, catalytic subunit, gamma
           isoform (Ppp1cc), mRNA
          Length = 2393

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 26  ccgctcccttcctggcttcctcctcctctcgc 57
           |||||||  ||| |||||||||||||||||||
Sbjct: 111 ccgctccgctccgggcttcctcctcctctcgc 80
to top
>gb|AC122423.2| Mus musculus BAC clone RP24-171N18 from 7, complete sequence
          Length = 141166

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 26     ccgctcccttcctggcttcctcctcctctcgc 57
              |||||||  ||| |||||||||||||||||||
Sbjct: 122997 ccgctccgctccgggcttcctcctcctctcgc 123028
to top
>gb|AC153663.6| Mus musculus BAC clone RP23-12J8 from chromosome 12, complete sequence
          Length = 248166

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 26    ccgctcccttcctggcttcctcctcctctcgc 57
             |||||||  ||| |||||||||||||||||||
Sbjct: 59412 ccgctccgctccgggcttcctcctcctctcgc 59381
to top
>gb|AC164158.3| Mus musculus BAC clone RP24-263G24 from chromosome 7, complete sequence
          Length = 200983

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 26     ccgctcccttcctggcttcctcctcctctcgc 57
              |||||||  ||| |||||||||||||||||||
Sbjct: 107032 ccgctccgctccgggcttcctcctcctctcgc 107063
to top
>gb|BC039972.1| Mus musculus mRNA similar to protein phosphatase 1, catalytic
          subunit, gamma isoform (cDNA clone IMAGE:4488149)
          Length = 1659

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 43 ccgctccgctccgggcttcctcctcctctcgc 12
to top
>gb|BC008157.1| Mus musculus cDNA clone IMAGE:3711560, **** WARNING: chimeric
          clone ****
          Length = 2504

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 33 ccgctccgctccgggcttcctcctcctctcgc 2
to top
>gb|AC102570.8| Mus musculus, clone RP23-228G18, complete sequence
          Length = 228644

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 35    tcctggcttcctcctcctct 54
             ||||||||||||||||||||
Sbjct: 91848 tcctggcttcctcctcctct 91829
to top
>emb|AL358154.8| Human DNA sequence from clone RP11-512J3 on chromosome 10 Contains the
             3' end of the LGI1 gene for leucine-rich glioma
             inactivated 1, complete sequence
          Length = 56963

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   cttgaggcaaggaggatgga 166
             ||||||||||||||||||||
Sbjct: 25549 cttgaggcaaggaggatgga 25568
to top
>dbj|AK147131.1| Mus musculus 16 days embryo kidney cDNA, RIKEN full-length enriched
           library, clone:I920183I08 product:protein phosphatase 1,
           catalytic subunit, gamma isoform, full insert sequence
          Length = 2379

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 26  ccgctcccttcctggcttcctcctcctctcgc 57
           |||||||  ||| |||||||||||||||||||
Sbjct: 112 ccgctccgctccgggcttcctcctcctctcgc 81
to top
>dbj|AK152625.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
          enriched library, clone:I830081G21 product:protein
          phosphatase 1, catalytic subunit, gamma isoform, full
          insert sequence
          Length = 2316

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 49 ccgctccgctccgggcttcctcctcctctcgc 18
to top
>dbj|AK152422.1| Mus musculus bone marrow macrophage cDNA, RIKEN full-length
          enriched library, clone:I830071E10 product:protein
          phosphatase 1, catalytic subunit, gamma isoform, full
          insert sequence
          Length = 1813

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 73 ccgctccgctccgggcttcctcctcctctcgc 42
to top
>dbj|AK169336.1| Mus musculus 16 days embryo kidney cDNA, RIKEN full-length
          enriched library, clone:I920187E21 product:protein
          phosphatase 1, catalytic subunit, gamma isoform, full
          insert sequence
          Length = 2337

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 70 ccgctccgctccgggcttcctcctcctctcgc 39
to top
>dbj|AK076009.1| Mus musculus 10 days embryo whole body cDNA, RIKEN full-length
          enriched library, clone:2610028M06 product:protein
          phosphatase 1, catalytic subunit, gamma isoform, full
          insert sequence
          Length = 1787

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                          
Query: 26 ccgctcccttcctggcttcctcctcctctcgc 57
          |||||||  ||| |||||||||||||||||||
Sbjct: 47 ccgctccgctccgggcttcctcctcctctcgc 16
to top
>gb|AC022364.28|AC022364 Homo sapiens 12 BAC RP11-967K21 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 73557

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 30    tcccttcctggcttcctcctcctc 53
             |||||||||| |||||||||||||
Sbjct: 61737 tcccttcctgacttcctcctcctc 61760
to top
>gb|AF035008.1|RNMGLUR5S1 Rattus norvegicus metabotropic glutamate receptor (mGluR5) gene, 5'
            region, exons 1A and 1B
          Length = 3433

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 253  ctagcaatgacttcttcagt 272
            ||||||||||||||||||||
Sbjct: 2655 ctagcaatgacttcttcagt 2636
to top
>emb|AL121992.24|HSDJ680D5 Human DNA sequence from clone RP4-680D5 on chromosome 1p36.13-36.31
             Contains the 3' end of the gene for a novel DnaJ
             domain-containing protein (KIAA0962, FLJ13743, FLJ12468),
             the AGMAT gene for agmatine ureohydrolase (agmatinase), a
             novel gene (FLJ34180), a novel pseudogene similar to Mus
             musculus ethanol induced 6 (Etohi6), a CD24 antigen (small
             cell lung carcinoma cluster 4 antigen) (CD24) pseudogene,
             the gene for DNA-damage inducible protein 2 (DDI2), the
             RSC1A1 gene for regulatory solute carrier protein family 1
             member 1 and the 5' end of the gene for a novel RUN and PH
             domain-containing protein (KIAA0842), complete sequence
          Length = 170399

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 35    tcctggcttcctcctcctct 54
             ||||||||||||||||||||
Sbjct: 81480 tcctggcttcctcctcctct 81499
to top
>gb|AC132587.5| Mus musculus BAC clone RP24-372N16 from 12, complete sequence
          Length = 181443

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                              
Query: 26     ccgctcccttcctggcttcctcctcctctcgc 57
              |||||||  ||| |||||||||||||||||||
Sbjct: 135931 ccgctccgctccgggcttcctcctcctctcgc 135900
to top
>emb|AL928681.5| Mouse DNA sequence from clone RP23-82M15 on chromosome 2, complete
              sequence
          Length = 125926

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 32     ccttcctggcttcctcctcctctc 55
              ||||| ||||||||||||||||||
Sbjct: 120832 ccttcttggcttcctcctcctctc 120855
to top
>emb|AL732492.11| Mouse DNA sequence from clone RP23-307C17 on chromosome 4, complete
              sequence
          Length = 166942

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 32     ccttcctggcttcctcctcc 51
              ||||||||||||||||||||
Sbjct: 148090 ccttcctggcttcctcctcc 148071
to top
>emb|AL591763.14| Mouse DNA sequence from clone RP23-480D17 on chromosome 2, complete
             sequence
          Length = 153847

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 33    cttcctggcttcctcctcct 52
             ||||||||||||||||||||
Sbjct: 34636 cttcctggcttcctcctcct 34655


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,963,220
Number of Sequences: 3902068
Number of extensions: 2963220
Number of successful extensions: 70848
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70677
Number of HSP's gapped (non-prelim): 171
length of query: 290
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 268
effective length of database: 17,147,199,772
effective search space: 4595449538896
effective search space used: 4595449538896
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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