ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart42f01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_474146.1| Oryza sativa (japonica cultivar-group), predic... 272 1e-69
2dbj|AK104831.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 1e-69
3dbj|AK072809.1| Oryza sativa (japonica cultivar-group) cDNA clon... 272 1e-69
4gb|AY105934.1| Zea mays PCO089998 mRNA sequence 222 9e-55
5emb|X96761.1|SSSULPTRP S.stapfianus mRNA for sulphate transporte... 206 5e-50
6emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4,... 105 1e-19
7dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 105 1e-19
8emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4,... 105 1e-19
9gb|AC151265.3| Mus musculus BAC clone RP24-372H7 from chromosome... 48 0.030
10gb|AC149154.3| Xenopus tropicalis clone ISB-241F10, complete seq... 42 1.8
11gb|AC114574.8| Mus musculus chromosome 6, clone RP23-151F20, com... 42 1.8
12gb|AC104956.6| Homo sapiens chromosome 18, clone RP11-646H8, com... 42 1.8
13gb|AC104367.6| Homo sapiens chromosome 18, clone RP11-126G14, co... 42 1.8
14gb|AY263324.1| Borrelia hermsii strain HS1 lolA locus, partial s... 40 7.2
15emb|BX901970.11| Zebrafish DNA sequence from clone CH211-214I7 i... 40 7.2
16emb|BX005426.16| Zebrafish DNA sequence from clone DKEY-1H24 in ... 40 7.2
17emb|CR352290.10| Zebrafish DNA sequence from clone DKEY-107G12 i... 40 7.2
18gb|AC129019.4| Mus musculus BAC clone RP24-541L1 from chromosome... 40 7.2
19ref|XM_762861.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 7.2
20gb|AC101969.6| Mus musculus chromosome 17, clone RP24-259G8, com... 40 7.2
21emb|BX323802.24| Zebrafish DNA sequence from clone DKEY-104I9 in... 40 7.2
22emb|AL713868.12| Human DNA sequence from clone RP11-488L4 on chr... 40 7.2
23emb|CR759788.7| Zebrafish DNA sequence from clone CH211-153F13, ... 40 7.2
24gb|AF404760.1|AF404760 Mus musculus alpha,alpha-trehalase (Treh)... 40 7.2
25gb|AF333597.1|AF333597 Xyrauchen texanus 12S ribosomal RNA gene,... 40 7.2
26emb|CR352652.1| Gallus gallus finished cDNA, clone ChEST423b12 40 7.2
27gb|AC016955.15| Homo sapiens 3 BAC RP11-21I16 (Roswell Park Canc... 40 7.2
28gb|AC142113.2| Mus musculus BAC clone RP23-444K20 from chromosom... 40 7.2
29gb|AC151971.3| Mus musculus BAC clone RP24-282C4 from 9, complet... 40 7.2
30emb|CR759796.17| Zebrafish DNA sequence from clone DKEY-18A10 in... 40 7.2
31emb|CR954297.15| Zebrafish DNA sequence from clone DKEY-69M3 in ... 40 7.2
32emb|CT027993.6| Mouse DNA sequence from clone RP24-82E21 on chro... 40 7.2
33gb|AC171209.1| Mus musculus BAC clone RP23-105E1 from chromosome... 40 7.2 
>ref|XM_474146.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1890

 Score =  272 bits (137), Expect = 1e-69
 Identities = 209/233 (89%)
 Strand = Plus / Minus

                                                                        
Query: 300  gcatcgttcgctcgttgtattttctccataacctctccggttggattcacaagtacaagc 359
            ||||| |||||||||||||| |||||||| |||||||| |||||||||||||||| ||||
Sbjct: 1799 gcatcattcgctcgttgtatcttctccatgacctctccagttggattcacaagtataagc 1740

                                                                        
Query: 360  tctaggccatgcttctctgttgatttctttaggtcgatgaggaatgctatgccgcttgtg 419
            ||||| ||||||||||||||||||||||| | |||||||||||| | |||||| ||||| 
Sbjct: 1739 tctagtccatgcttctctgttgatttcttcaagtcgatgaggaacgatatgccacttgta 1680

                                                                        
Query: 420  tcaattgcagggacagctgatagatccaagattacgacacggagttcactttgtttattc 479
            |||||||||||||||||||| |||||||| ||||||| | ||||||||||||||||  | 
Sbjct: 1679 tcaattgcagggacagctgacagatccaaaattacgaaatggagttcactttgtttggtt 1620

                                                                 
Query: 480  cctgaaaaactttcatcctctatccatcttttagtcctttcatttaggtagtt 532
            |||| | ||||||| || ||||||||||||||| |||||||||||||||||||
Sbjct: 1619 cctgcagaactttcttcttctatccatcttttaatcctttcatttaggtagtt 1567
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>dbj|AK104831.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-042-A04, full
            insert sequence
          Length = 2181

 Score =  272 bits (137), Expect = 1e-69
 Identities = 209/233 (89%)
 Strand = Plus / Minus

                                                                        
Query: 300  gcatcgttcgctcgttgtattttctccataacctctccggttggattcacaagtacaagc 359
            ||||| |||||||||||||| |||||||| |||||||| |||||||||||||||| ||||
Sbjct: 1969 gcatcattcgctcgttgtatcttctccatgacctctccagttggattcacaagtataagc 1910

                                                                        
Query: 360  tctaggccatgcttctctgttgatttctttaggtcgatgaggaatgctatgccgcttgtg 419
            ||||| ||||||||||||||||||||||| | |||||||||||| | |||||| ||||| 
Sbjct: 1909 tctagtccatgcttctctgttgatttcttcaagtcgatgaggaacgatatgccacttgta 1850

                                                                        
Query: 420  tcaattgcagggacagctgatagatccaagattacgacacggagttcactttgtttattc 479
            |||||||||||||||||||| |||||||| ||||||| | ||||||||||||||||  | 
Sbjct: 1849 tcaattgcagggacagctgacagatccaaaattacgaaatggagttcactttgtttggtt 1790

                                                                 
Query: 480  cctgaaaaactttcatcctctatccatcttttagtcctttcatttaggtagtt 532
            |||| | ||||||| || ||||||||||||||| |||||||||||||||||||
Sbjct: 1789 cctgcagaactttcttcttctatccatcttttaatcctttcatttaggtagtt 1737
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>dbj|AK072809.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141I19, full
            insert sequence
          Length = 2338

 Score =  272 bits (137), Expect = 1e-69
 Identities = 209/233 (89%)
 Strand = Plus / Minus

                                                                        
Query: 300  gcatcgttcgctcgttgtattttctccataacctctccggttggattcacaagtacaagc 359
            ||||| |||||||||||||| |||||||| |||||||| |||||||||||||||| ||||
Sbjct: 1975 gcatcattcgctcgttgtatcttctccatgacctctccagttggattcacaagtataagc 1916

                                                                        
Query: 360  tctaggccatgcttctctgttgatttctttaggtcgatgaggaatgctatgccgcttgtg 419
            ||||| ||||||||||||||||||||||| | |||||||||||| | |||||| ||||| 
Sbjct: 1915 tctagtccatgcttctctgttgatttcttcaagtcgatgaggaacgatatgccacttgta 1856

                                                                        
Query: 420  tcaattgcagggacagctgatagatccaagattacgacacggagttcactttgtttattc 479
            |||||||||||||||||||| |||||||| ||||||| | ||||||||||||||||  | 
Sbjct: 1855 tcaattgcagggacagctgacagatccaaaattacgaaatggagttcactttgtttggtt 1796

                                                                 
Query: 480  cctgaaaaactttcatcctctatccatcttttagtcctttcatttaggtagtt 532
            |||| | ||||||| || ||||||||||||||| |||||||||||||||||||
Sbjct: 1795 cctgcagaactttcttcttctatccatcttttaatcctttcatttaggtagtt 1743
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>gb|AY105934.1| Zea mays PCO089998 mRNA sequence
          Length = 2279

 Score =  222 bits (112), Expect = 9e-55
 Identities = 262/312 (83%)
 Strand = Plus / Minus

                                                                        
Query: 221  catcttggcaaatccagaaagtgaagcgattgcttccccggtggtcaaatagaggcagtc 280
            ||||||||||| | |||||||||||||||||||||| || ||||||| ||| | ||| ||
Sbjct: 2057 catcttggcaagtgcagaaagtgaagcgattgcttcgccagtggtcagatacaagcaatc 1998

                                                                        
Query: 281  ctgcctgaaatgattgtgtgcatcgttcgctcgttgtattttctccataacctctccggt 340
              |||| ||||  || |  || ||||| || ||||||||||||||||| || ||||| ||
Sbjct: 1997 tggcctaaaatagttttcagcctcgtttgcacgttgtattttctccatgacttctccagt 1938

                                                                        
Query: 341  tggattcacaagtacaagctctaggccatgcttctctgttgatttctttaggtcgatgag 400
            |||||| ||||| |||||||| || ||| | |||||| |||||||||||| ||| |||||
Sbjct: 1937 tggattgacaagcacaagctccagaccacgtttctctattgatttctttatgtcaatgag 1878

                                                                        
Query: 401  gaatgctatgccgcttgtgtcaattgcagggacagctgatagatccaagattacgacacg 460
            ||| |||||||| ||||||||||||||||| |||||||| ||||||||||||| || | |
Sbjct: 1877 gaacgctatgccacttgtgtcaattgcaggaacagctgacagatccaagattatgaaatg 1818

                                                                        
Query: 461  gagttcactttgtttattccctgaaaaactttcatcctctatccatcttttagtcctttc 520
            ||||||| | ||||||| |  |  ||||  ||| |||||||||||||||||| |||||||
Sbjct: 1817 gagttcagtatgtttatcctgttcaaaagattcttcctctatccatcttttaatcctttc 1758

                        
Query: 521  atttaggtagtt 532
            ||| ||||||||
Sbjct: 1757 attcaggtagtt 1746
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>emb|X96761.1|SSSULPTRP S.stapfianus mRNA for sulphate transporter protein
          Length = 2515

 Score =  206 bits (104), Expect = 5e-50
 Identities = 275/328 (83%), Gaps = 3/328 (0%)
 Strand = Plus / Minus

                                                                        
Query: 208  tctaaggtgttgccatcttggcaaatccagaaagtgaagcgattgcttccccggtggtca 267
            |||| |||| |||||||||||| |   ||||||| ||||| | ||||||||| |||||||
Sbjct: 2038 tctagggtgatgccatcttggctagcgcagaaagggaagcaactgcttccccagtggtca 1979

                                                                        
Query: 268  a-atagaggcagtcctg-cctgaaatgattgtgtgcatcgttcgctcgttgtattttctc 325
            | ||| ||||| ||| | |||||||||  ||||||| |||||| |||| |||||||| ||
Sbjct: 1978 agatacaggcaatcccgacctgaaatgcctgtgtgcctcgttcactcgctgtattttttc 1919

                                                                        
Query: 326  cataacc-tctccggttggattcacaagtacaagctctaggccatgcttctctgttgatt 384
            ||| ||| ||||||||||||||||||||||||||||| || ||| |||| ||| ||||||
Sbjct: 1918 catgaccctctccggttggattcacaagtacaagctccagtccacgcttttctattgatt 1859

                                                                        
Query: 385  tctttaggtcgatgaggaatgctatgccgcttgtgtcaattgcagggacagctgatagat 444
            | |||| ||| |||||||||||||  || ||||||||||| ||||| |||||||| ||||
Sbjct: 1858 tttttatgtcaatgaggaatgctacaccacttgtgtcaatcgcaggaacagctgacagat 1799

                                                                        
Query: 445  ccaagattacgacacggagttcactttgtttattccctgaaaaactttcatcctctatcc 504
            |||| |||||||  ||||| ||  |||||||| ||  || | ||||||| ||||||||||
Sbjct: 1798 ccaaaattacgaatcggagctctgtttgtttagtctgtgcagaactttcttcctctatcc 1739

                                        
Query: 505  atcttttagtcctttcatttaggtagtt 532
            |||||||  |||||||||| || |||||
Sbjct: 1738 atcttttgatcctttcattcagatagtt 1711
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>emb|AL606690.3|OSJN00080 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060D06,
             complete sequence
          Length = 151506

 Score =  105 bits (53), Expect = 1e-19
 Identities = 74/81 (91%)
 Strand = Plus / Plus

                                                                         
Query: 359   ctctaggccatgcttctctgttgatttctttaggtcgatgaggaatgctatgccgcttgt 418
             |||||| ||||||||||||||||||||||| | |||||||||||| | |||||| |||||
Sbjct: 21782 ctctagtccatgcttctctgttgatttcttcaagtcgatgaggaacgatatgccacttgt 21841

                                  
Query: 419   gtcaattgcagggacagctga 439
              ||||||||||||||||||||
Sbjct: 21842 atcaattgcagggacagctga 21862



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                         
Query: 300   gcatcgttcgctcgttgtattttctccataacctctccggttggattcacaagtacaagc 359
             ||||| |||||||||||||| |||||||| |||||||| |||||||||||||||| ||||
Sbjct: 21562 gcatcattcgctcgttgtatcttctccatgacctctccagttggattcacaagtataagc 21621

              
Query: 360   t 360
             |
Sbjct: 21622 t 21622



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                         
Query: 436   ctgatagatccaagattacgacacggagttcactttgtttattccctgaaaaactttcat 495
             |||| |||||||| ||||||| | ||||||||||||||||  | |||| | ||||||| |
Sbjct: 21996 ctgacagatccaaaattacgaaatggagttcactttgtttggttcctgcagaactttctt 22055

                                   
Query: 496   cctctatccatcttttagtcct 517
             | ||||||||||||||| ||||
Sbjct: 22056 cttctatccatcttttaatcct 22077
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  105 bits (53), Expect = 1e-19
 Identities = 74/81 (91%)
 Strand = Plus / Plus

                                                                            
Query: 359      ctctaggccatgcttctctgttgatttctttaggtcgatgaggaatgctatgccgcttgt 418
                |||||| ||||||||||||||||||||||| | |||||||||||| | |||||| |||||
Sbjct: 33249521 ctctagtccatgcttctctgttgatttcttcaagtcgatgaggaacgatatgccacttgt 33249580

                                     
Query: 419      gtcaattgcagggacagctga 439
                 ||||||||||||||||||||
Sbjct: 33249581 atcaattgcagggacagctga 33249601



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                            
Query: 300      gcatcgttcgctcgttgtattttctccataacctctccggttggattcacaagtacaagc 359
                ||||| |||||||||||||| |||||||| |||||||| |||||||||||||||| ||||
Sbjct: 33249301 gcatcattcgctcgttgtatcttctccatgacctctccagttggattcacaagtataagc 33249360

                 
Query: 360      t 360
                |
Sbjct: 33249361 t 33249361



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                            
Query: 436      ctgatagatccaagattacgacacggagttcactttgtttattccctgaaaaactttcat 495
                |||| |||||||| ||||||| | ||||||||||||||||  | |||| | ||||||| |
Sbjct: 33249735 ctgacagatccaaaattacgaaatggagttcactttgtttggttcctgcagaactttctt 33249794

                                      
Query: 496      cctctatccatcttttagtcct 517
                | ||||||||||||||| ||||
Sbjct: 33249795 cttctatccatcttttaatcct 33249816
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>emb|AL606692.3|OSJN00105 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0059K02,
              complete sequence
          Length = 165745

 Score =  105 bits (53), Expect = 1e-19
 Identities = 74/81 (91%)
 Strand = Plus / Plus

                                                                          
Query: 359    ctctaggccatgcttctctgttgatttctttaggtcgatgaggaatgctatgccgcttgt 418
              |||||| ||||||||||||||||||||||| | |||||||||||| | |||||| |||||
Sbjct: 132170 ctctagtccatgcttctctgttgatttcttcaagtcgatgaggaacgatatgccacttgt 132229

                                   
Query: 419    gtcaattgcagggacagctga 439
               ||||||||||||||||||||
Sbjct: 132230 atcaattgcagggacagctga 132250



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 56/61 (91%)
 Strand = Plus / Plus

                                                                          
Query: 300    gcatcgttcgctcgttgtattttctccataacctctccggttggattcacaagtacaagc 359
              ||||| |||||||||||||| |||||||| |||||||| |||||||||||||||| ||||
Sbjct: 131950 gcatcattcgctcgttgtatcttctccatgacctctccagttggattcacaagtataagc 132009

               
Query: 360    t 360
              |
Sbjct: 132010 t 132010



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 70/82 (85%)
 Strand = Plus / Plus

                                                                          
Query: 436    ctgatagatccaagattacgacacggagttcactttgtttattccctgaaaaactttcat 495
              |||| |||||||| ||||||| | ||||||||||||||||  | |||| | ||||||| |
Sbjct: 132384 ctgacagatccaaaattacgaaatggagttcactttgtttggttcctgcagaactttctt 132443

                                    
Query: 496    cctctatccatcttttagtcct 517
              | ||||||||||||||| ||||
Sbjct: 132444 cttctatccatcttttaatcct 132465
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>gb|AC151265.3| Mus musculus BAC clone RP24-372H7 from chromosome 17, complete sequence
          Length = 191739

 Score = 48.1 bits (24), Expect = 0.030
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 142    gatgagaaggcaatgcaaatttag 165
              ||||||||||||||||||||||||
Sbjct: 131895 gatgagaaggcaatgcaaatttag 131872
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>gb|AC149154.3| Xenopus tropicalis clone ISB-241F10, complete sequence
          Length = 96260

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 235   cagaaagtgaagcgattgctt 255
             |||||||||||||||||||||
Sbjct: 76531 cagaaagtgaagcgattgctt 76511
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>gb|AC114574.8| Mus musculus chromosome 6, clone RP23-151F20, complete sequence
          Length = 252723

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 279   tcctgcctgaaatgattgtgt 299
             |||||||||||||||||||||
Sbjct: 55297 tcctgcctgaaatgattgtgt 55277
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>gb|AC104956.6| Homo sapiens chromosome 18, clone RP11-646H8, complete sequence
          Length = 157587

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 94    atagctacaaacaaacttgtgaaat 118
             ||||||||||||||| |||||||||
Sbjct: 40254 atagctacaaacaaaattgtgaaat 40278
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>gb|AC104367.6| Homo sapiens chromosome 18, clone RP11-126G14, complete sequence
          Length = 163931

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 94     atagctacaaacaaacttgtgaaat 118
              ||||||||||||||| |||||||||
Sbjct: 151425 atagctacaaacaaaattgtgaaat 151401
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>gb|AY263324.1| Borrelia hermsii strain HS1 lolA locus, partial sequence
          Length = 4637

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 177  gatgatcaaaatggcaattc 196
            ||||||||||||||||||||
Sbjct: 1778 gatgatcaaaatggcaattc 1797
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>emb|BX901970.11| Zebrafish DNA sequence from clone CH211-214I7 in linkage group 1,
             complete sequence
          Length = 22414

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   tgcaaatttagcattgcaat 174
             ||||||||||||||||||||
Sbjct: 16379 tgcaaatttagcattgcaat 16360
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>emb|BX005426.16| Zebrafish DNA sequence from clone DKEY-1H24 in linkage group 1, complete
              sequence
          Length = 202018

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 155    tgcaaatttagcattgcaat 174
              ||||||||||||||||||||
Sbjct: 183398 tgcaaatttagcattgcaat 183417
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>emb|CR352290.10| Zebrafish DNA sequence from clone DKEY-107G12 in linkage group 18,
            complete sequence
          Length = 137797

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  ctaaggtgttgccatcttgg 228
            ||||||||||||||||||||
Sbjct: 1804 ctaaggtgttgccatcttgg 1823
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>gb|AC129019.4| Mus musculus BAC clone RP24-541L1 from chromosome 13, complete sequence
          Length = 190792

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 34    catgaatgtacatatttcaa 53
             ||||||||||||||||||||
Sbjct: 61417 catgaatgtacatatttcaa 61398
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>ref|XM_762861.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_228_6683_7273)
           partial mRNA
          Length = 591

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 384 ttctttaggtcgatgaggaa 403
           ||||||||||||||||||||
Sbjct: 578 ttctttaggtcgatgaggaa 559
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>gb|AC101969.6| Mus musculus chromosome 17, clone RP24-259G8, complete sequence
          Length = 219711

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 38    aatgtacatatttcaagcacctaatttc 65
             |||||||||||| |||| ||||||||||
Sbjct: 53617 aatgtacatattccaagtacctaatttc 53590
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>emb|BX323802.24| Zebrafish DNA sequence from clone DKEY-104I9 in linkage group 10,
             complete sequence
          Length = 109743

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 345   ttcacaagtacaagctctag 364
             ||||||||||||||||||||
Sbjct: 71726 ttcacaagtacaagctctag 71745
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>emb|AL713868.12| Human DNA sequence from clone RP11-488L4 on chromosome 1 Contains the
             5' end of the SLC35F3 gene for solute carrier family 35
             member F3 and a CpG island, complete sequence
          Length = 108012

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 76    acttgaagggcactgaagat 95
             ||||||||||||||||||||
Sbjct: 67076 acttgaagggcactgaagat 67095
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>emb|CR759788.7| Zebrafish DNA sequence from clone CH211-153F13, complete sequence
          Length = 197075

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 159   aatttagcattgcaatcaga 178
             ||||||||||||||||||||
Sbjct: 10534 aatttagcattgcaatcaga 10553
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>gb|AF404760.1|AF404760 Mus musculus alpha,alpha-trehalase (Treh) gene, exons 2 through 15
            and partial cds
          Length = 5617

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 428  agggacagctgatagatcca 447
            ||||||||||||||||||||
Sbjct: 4065 agggacagctgatagatcca 4084
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>gb|AF333597.1|AF333597 Xyrauchen texanus 12S ribosomal RNA gene, partial sequence; tRNA-Val
            gene, complete sequence; and 16S ribosomal RNA gene,
            partial sequence; mitochondrial genes for mitochondrial
            products
          Length = 2703

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 509  tttagtcctttcatttaggt 528
            ||||||||||||||||||||
Sbjct: 1096 tttagtcctttcatttaggt 1077
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>emb|CR352652.1| Gallus gallus finished cDNA, clone ChEST423b12
          Length = 1187

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 154 atgcaaatttagcattgcaatcag 177
           ||||||||||||||||||| ||||
Sbjct: 339 atgcaaatttagcattgcactcag 316
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>gb|AC016955.15| Homo sapiens 3 BAC RP11-21I16 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 169343

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 142   gatgagaaggcaatgcaaatttagcatt 169
             ||||| |||||||||||||| |||||||
Sbjct: 12548 gatgataaggcaatgcaaatatagcatt 12521
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>gb|AC142113.2| Mus musculus BAC clone RP23-444K20 from chromosome 9, complete sequence
          Length = 188724

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 428   agggacagctgatagatcca 447
             ||||||||||||||||||||
Sbjct: 60237 agggacagctgatagatcca 60256
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>gb|AC151971.3| Mus musculus BAC clone RP24-282C4 from 9, complete sequence
          Length = 179607

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 428   agggacagctgatagatcca 447
             ||||||||||||||||||||
Sbjct: 37722 agggacagctgatagatcca 37703
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>emb|CR759796.17| Zebrafish DNA sequence from clone DKEY-18A10 in linkage group 10,
             complete sequence
          Length = 130961

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 345   ttcacaagtacaagctctag 364
             ||||||||||||||||||||
Sbjct: 43315 ttcacaagtacaagctctag 43296
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>emb|CR954297.15| Zebrafish DNA sequence from clone DKEY-69M3 in linkage group 8,
             complete sequence
          Length = 232837

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 476   attccctgaaaaactttcat 495
             ||||||||||||||||||||
Sbjct: 34747 attccctgaaaaactttcat 34728
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>emb|CT027993.6| Mouse DNA sequence from clone RP24-82E21 on chromosome 17, complete
              sequence
          Length = 241014

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 38     aatgtacatatttcaagcacctaatttc 65
              |||||||||||| |||| ||||||||||
Sbjct: 153552 aatgtacatattccaagtacctaatttc 153525
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>gb|AC171209.1| Mus musculus BAC clone RP23-105E1 from chromosome 17, complete sequence
          Length = 212184

 Score = 40.1 bits (20), Expect = 7.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 38    aatgtacatatttcaagcacctaatttc 65
             |||||||||||| |||| ||||||||||
Sbjct: 91071 aatgtacatattccaagtacctaatttc 91044


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,050,295
Number of Sequences: 3902068
Number of extensions: 5050295
Number of successful extensions: 94582
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94464
Number of HSP's gapped (non-prelim): 116
length of query: 532
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 509
effective length of database: 17,143,297,704
effective search space: 8725938531336
effective search space used: 8725938531336
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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