Clone Name | rbart42e11 |
---|---|
Clone Library Name | barley_pub |
>KPYC_SOYBN (Q42806) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK)| Length = 511 Score = 51.2 bits (121), Expect = 1e-06 Identities = 24/33 (72%), Positives = 27/33 (81%) Frame = -3 Query: 443 KSAVKKQLCKAGDAVVVLHRIGVASVIKICTVQ 345 KSA ++ LCK GDAVV LHRIG ASVIKIC V+ Sbjct: 479 KSATERALCKPGDAVVALHRIGAASVIKICIVK 511
>KPYC_SOLTU (P22200) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK)| Length = 510 Score = 51.2 bits (121), Expect = 1e-06 Identities = 25/33 (75%), Positives = 27/33 (81%) Frame = -3 Query: 443 KSAVKKQLCKAGDAVVVLHRIGVASVIKICTVQ 345 KSAV + LCK GDAVV LHRIG ASVIKIC V+ Sbjct: 478 KSAVTRGLCKPGDAVVALHRIGSASVIKICVVK 510
>KPYC_TOBAC (Q42954) Pyruvate kinase, cytosolic isozyme (EC 2.7.1.40) (PK)| Length = 508 Score = 43.9 bits (102), Expect = 2e-04 Identities = 21/31 (67%), Positives = 24/31 (77%) Frame = -3 Query: 437 AVKKQLCKAGDAVVVLHRIGVASVIKICTVQ 345 A K LCK GD+VV LHR+G ASVIKI TV+ Sbjct: 478 AKTKGLCKQGDSVVALHRVGTASVIKIVTVK 508
>KPYC_ARATH (O65595) Probable pyruvate kinase, cytosolic isozyme (EC 2.7.1.40)| (PK) Length = 497 Score = 40.0 bits (92), Expect = 0.003 Identities = 20/29 (68%), Positives = 22/29 (75%) Frame = -3 Query: 431 KKQLCKAGDAVVVLHRIGVASVIKICTVQ 345 KKQLCK GD+VV L R G A VIKI TV+ Sbjct: 469 KKQLCKTGDSVVALFRTGNAIVIKILTVK 497
>SYN1_RAT (P09951) Synapsin-1 (Synapsin I)| Length = 704 Score = 29.6 bits (65), Expect = 3.5 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = +3 Query: 195 SPLPPNLPAQIGSMQQTATDGTISTCFHKTQVSPRQQGPG 314 SPLP LP+ + QQ+A+ T T Q P GPG Sbjct: 500 SPLPQRLPSPTAAPQQSASQATPMTQGQGRQSRPVAGGPG 539
>SYN1_MOUSE (O88935) Synapsin-1 (Synapsin I)| Length = 706 Score = 29.3 bits (64), Expect = 4.5 Identities = 16/40 (40%), Positives = 20/40 (50%) Frame = +3 Query: 195 SPLPPNLPAQIGSMQQTATDGTISTCFHKTQVSPRQQGPG 314 SPLP LP+ + QQ+A+ T T Q P GPG Sbjct: 502 SPLPQRLPSPTAAPQQSASQATPVTQGQGRQSRPVAGGPG 541
>TFEB_HUMAN (P19484) Transcription factor EB| Length = 476 Score = 28.9 bits (63), Expect = 5.9 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +2 Query: 263 INLFPQDPGFATAARTGVLGSPCPADIT 346 +N++ DP TA+ GV S CPAD+T Sbjct: 191 LNVYSSDPQ-VTASLVGVTSSSCPADLT 217
>CCR5_ATEGE (Q95NC4) C-C chemokine receptor type 5 (C-C CKR-5) (CC-CKR-5)| (CCR-5) (CCR5) (CD195 antigen) Length = 352 Score = 28.9 bits (63), Expect = 5.9 Identities = 13/43 (30%), Positives = 22/43 (51%) Frame = -1 Query: 241 CCIDPI*AGKLGGRGLRYIELFYYRWYAPCSMVCGRCHACTIF 113 CC++PI +G + Y+ +F+ + A C C C+IF Sbjct: 290 CCVNPIIYAFVGEKFRNYLLVFFQKHIAKCF-----CECCSIF 327
>TIG_WOLPM (Q73I58) Trigger factor (TF)| Length = 444 Score = 28.9 bits (63), Expect = 5.9 Identities = 13/36 (36%), Positives = 24/36 (66%) Frame = +3 Query: 18 ILLLPHVSTDITTKRVLQSSEYNKQQQQLIREKIVQ 125 +++ +VS D+ RVL+ E NKQ Q+L+R + ++ Sbjct: 379 VIVNQYVSKDVQFDRVLKHFESNKQFQELVRGQALE 414
>TFEB_MOUSE (Q9R210) Transcription factor EB| Length = 475 Score = 28.5 bits (62), Expect = 7.7 Identities = 13/28 (46%), Positives = 18/28 (64%) Frame = +2 Query: 263 INLFPQDPGFATAARTGVLGSPCPADIT 346 +N++ DP TA+ GV S CPAD+T Sbjct: 190 LNVYSGDPQ-VTASMVGVTSSSCPADLT 216
>YMH1_CAEEL (P34468) Hypothetical protein F58A4.1| Length = 254 Score = 28.5 bits (62), Expect = 7.7 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = +3 Query: 192 RSPLPPNLPAQIGSMQQTATDGTISTCFHKTQVSPRQQGPG 314 RSP PPN+P +G + AT S ++P G G Sbjct: 191 RSPTPPNIPLLVGGQSRLATVRPDSPYASDAALNPLNGGAG 231
>KPBB_HUMAN (Q93100) Phosphorylase b kinase beta regulatory chain| (Phosphorylase kinase beta subunit) Length = 1092 Score = 28.5 bits (62), Expect = 7.7 Identities = 11/21 (52%), Positives = 13/21 (61%) Frame = +2 Query: 128 MTPATHHTTGGIPTVIKELYI 190 +TP HHTT G P V K Y+ Sbjct: 391 LTPVLHHTTEGYPVVPKYYYV 411 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 61,605,476 Number of Sequences: 219361 Number of extensions: 1209449 Number of successful extensions: 3228 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 3149 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3228 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2618960580 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)