ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart42e11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BT017789.1| Zea mays clone EL01N0504E06.c mRNA sequence 86 1e-13
2gb|AY108519.1| Zea mays PCO111031 mRNA sequence 66 1e-07
3ref|XM_474351.1| Oryza sativa (japonica cultivar-group), predic... 52 0.002
4emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4,... 52 0.002
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 52 0.002
6dbj|AK100393.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
7dbj|AK068805.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 0.002
8emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 52 0.002
9gb|BC030770.2| Homo sapiens cDNA clone IMAGE:4813826 50 0.006
10gb|AC005358.1|AC005358 Homo sapiens chromosome 17, clone hRPK.74... 50 0.006
11emb|AL928889.14| Mouse DNA sequence from clone RP23-271L22 on ch... 46 0.097
12gb|AC159257.2| Mus musculus BAC clone RP24-86H20 from chromosome... 44 0.38
13gb|AY560107.1| HIV-1 isolate 98USHVTN1925c1 from USA, complete g... 44 0.38
14gb|AY611368.1| HIV-1 isolate Ac-02 Ac 1b.fa from USA gag protein... 44 0.38
15gb|AY360916.1| HIV-1 isolate gag16 from United Kingdom gag prote... 44 0.38
16gb|AY360914.1| HIV-1 isolate gag13 from United Kingdom gag prote... 44 0.38
17gb|AY206651.1| HIV-1 from USA patient R2 gag protein (gag) gene,... 44 0.38
18gb|AC157588.8| Mus musculus BAC clone RP24-95J4 from chromosome ... 44 0.38
19dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
20gb|AF073441.1|AF073441 HIV-1 isolate 053i from USA clone 1 gag p... 44 0.38
21gb|AF073440.1|AF073440 HIV-1 isolate 053i from USA clone 10 gag ... 44 0.38
22gb|AF073439.1|AF073439 HIV-1 isolate 053i from USA clone 2 gag p... 44 0.38
23gb|AF073438.1|AF073438 HIV-1 isolate 053i from USA clone 3 gag p... 44 0.38
24gb|AF073437.1|AF073437 HIV-1 isolate 053i from USA clone 4 gag p... 44 0.38
25gb|AF073436.1|AF073436 HIV-1 isolate 053i from USA clone 5 gag p... 44 0.38
26gb|AF073435.1|AF073435 HIV-1 isolate 053i from USA clone 6 gag p... 44 0.38
27gb|AF073434.1|AF073434 HIV-1 isolate 053i from USA clone 7 gag p... 44 0.38
28gb|AF073433.1|AF073433 HIV-1 isolate 053i from USA clone 8 gag p... 44 0.38
29gb|AF073432.1|AF073432 HIV-1 isolate 053i from USA clone 9 gag p... 44 0.38
30dbj|AP004617.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.38
31ref|XM_636726.1| Dictyostelium discoideum hypothetical protein (... 42 1.5
32gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
33gb|AY360921.1| HIV-1 isolate gag22 from United Kingdom gag prote... 42 1.5
34gb|AY049826.1| Dalatias licha internal transcribed spacer 2, and... 42 1.5
35emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 42 1.5
36emb|AL139084.9| Human DNA sequence from clone RP11-318G11 on chr... 42 1.5
37gb|AC021483.11| Homo sapiens, clone RP11-38G5, complete sequence 42 1.5
38gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 geno... 42 1.5
39gb|AF480673.1| HIV-1 isolate VT18 from Brazil gag protein (gag) ... 42 1.5
40gb|AC099016.1| Drosophila melanogaster, chromosome 2R, region 56... 42 1.5
41gb|AC008188.4|AC008188 Drosophila melanogaster, chromosome 2R, r... 42 1.5
42dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
43dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
44dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
45gb|AC008236.4|AC008236 Drosophila melanogaster, chromosome 3R, r... 42 1.5
46gb|AC008235.4|AC008235 Drosophila melanogaster, chromosome 3R, r... 42 1.5
47dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
48dbj|AK107352.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
49gb|AF028568.1|AF028568 HIV-1 isolate 115i clone 14 from Massachu... 42 1.5
50gb|AF028563.1|AF028563 HIV-1 isolate 115i clone 7 from Massachus... 42 1.5
51dbj|AK062888.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
52emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D ... 42 1.5
53gb|AE003743.3| Drosophila melanogaster chromosome 3R, section 81... 42 1.5
54gb|AE003797.3| Drosophila melanogaster chromosome 2R, section 53... 42 1.5
55dbj|AK113476.1| Ciona intestinalis cDNA, clone:ciad060m19, full ... 42 1.5
56gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
57gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.5
58gb|BT017351.1| Zea mays clone EL01N0323G10.c mRNA sequence 40 6.0
59gb|AC136150.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
60gb|BC061056.1| Mus musculus RIKEN cDNA 2010204K13 gene, mRNA (cD... 40 6.0
61gb|BC042200.1| Mus musculus RIKEN cDNA 2010204K13 gene, mRNA (cD... 40 6.0
62gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 6.0
63ref|XM_368987.1| Magnaporthe grisea 70-15 chromosome VI hypothet... 40 6.0
64ref|XM_416321.1| PREDICTED: Gallus gallus similar to FELE-2 (LOC... 40 6.0
65ref|XM_457868.1| Debaryomyces hansenii CBS767 hypothetical prote... 40 6.0
66gb|AC117826.10| Mus musculus chromosome 1, clone RP24-81K19, com... 40 6.0
67ref|XM_714281.1| Candida albicans SC5314 hypothetical protein (C... 40 6.0
68ref|XM_705107.1| Candida albicans SC5314 hypothetical protein (C... 40 6.0
69ref|XM_705106.1| Candida albicans SC5314 putative peroxisomal pe... 40 6.0
70ref|XM_705100.1| Candida albicans SC5314 potential peroxisomal p... 40 6.0
71gb|AC140245.3| Mus musculus BAC clone RP23-293J3 from chromosome... 40 6.0
72emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4,... 40 6.0
73gb|AC113490.10| Mus musculus chromosome 1, clone RP23-358M7, com... 40 6.0
74ref|XM_499831.1| Yarrowia lipolytica CLIB122, YALI0A07018g predi... 40 6.0
75ref|XM_505155.1| Yarrowia lipolytica CLIB122, YALI0F08305g predi... 40 6.0
76gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, compl... 40 6.0
77emb|AL357150.7| Human DNA sequence from clone RP11-122C9 on chro... 40 6.0
78emb|AL355490.24| Human DNA sequence from clone RP11-452K12 on ch... 40 6.0
79emb|BX064180.1|CNS09LOO Single read from an extremity of a full-... 40 6.0
80emb|BX057922.1|CNS09GUU Single read from an extremity of a full-... 40 6.0
81emb|BX044294.1|CNS096CA Single read from an extremity of a full-... 40 6.0
82emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS... 40 6.0
83emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.0
84emb|CR396593.6| Zebrafish DNA sequence from clone CH211-194G1 in... 40 6.0
85gb|AC113192.3| Homo sapiens chromosome 11, clone RP11-646J21, co... 40 6.0
86gb|AC008440.9| Homo sapiens chromosome 19 clone CTC-331H23, comp... 40 6.0
87tpg|BK002528.1| TPA: TPA_inf: Drosophila melanogaster HDC13464 (... 40 6.0
88gb|AC093916.2| Homo sapiens BAC clone RP11-789C2 from 4, complet... 40 6.0
89gb|AC163764.4| Pan troglodytes BAC clone CH251-169M18 from chrom... 40 6.0
90gb|AC156839.4| Pan troglodytes BAC clone CH251-349M12 from chrom... 40 6.0
91dbj|AK077356.1| Mus musculus adult male pituitary gland cDNA, RI... 40 6.0
92dbj|AK002502.1| Mus musculus adult male kidney cDNA, RIKEN full-... 40 6.0
93dbj|AK008437.1| Mus musculus adult male small intestine cDNA, RI... 40 6.0
94gb|BC072610.1| Mus musculus RIKEN cDNA 2010204K13 gene, mRNA (cD... 40 6.0
95gb|AC016987.4|AC016987 Homo sapiens chromosome 15, clone RP11-13... 40 6.0
96dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
97gb|AC090942.1|AC090942 Homo sapiens chromosome 3 clone RP11-220D... 40 6.0
98gb|AC007650.7|AC007650 Drosophila melanogaster, chromosome 3R, r... 40 6.0
99gb|AC122920.4| Mus musculus BAC clone RP23-33J11 from chromosome... 40 6.0
100gb|AC143330.4| Mus musculus BAC clone RP23-263D5 from chromosome... 40 6.0
101gb|AC066589.3|AC066589 Homo sapiens chromosome 3 clone RP11-309M... 40 6.0
102dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
103dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.0
104emb|AL929073.19| Mouse DNA sequence from clone RP23-125D6 on chr... 40 6.0
105gb|AY974244.1| Homo sapiens MMS19-like (MET18 homolog, S. cerevi... 40 6.0
106gb|AF038507.1|AF038507 Mus musculus CIP7 (cip7) mRNA, complete cds 40 6.0
107gb|M12255.1|MUSTGH2 Mus musculus tRNA-His gene, complete sequence 40 6.0
108gb|AE003701.2| Drosophila melanogaster chromosome 3R, section 39... 40 6.0
109emb|BX629354.1|CNS09SBQ Tetraodon nigroviridis BAC sequence 40 6.0
110gb|AC116724.13| Mus musculus chromosome 15, clone RP23-267E9, co... 40 6.0
111gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.0
112emb|BX276100.4|CNS09S4X Oryza sativa chromosome 12, . Partial se... 40 6.0
113gb|AC132444.3| Mus musculus BAC clone RP23-160D6 from 8, complet... 40 6.0
114gb|AC131696.4| Mus musculus BAC clone RP23-403E5 from 1, complet... 40 6.0
115emb|AL929075.5| Zebrafish DNA sequence from clone CH211-132B9 in... 40 6.0
116emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 6.0
117emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB1... 40 6.0
118emb|AL663104.17| Mouse DNA sequence from clone RP23-207H18 on ch... 40 6.0
119emb|AL591970.10| Mouse DNA sequence from clone RP23-190L21 on ch... 40 6.0
120emb|X76583.1|HSRWG1F9 H.sapiens simple DNA sequence region clone... 40 6.0
121gb|AC027124.5| Homo sapiens chromosome 3 clone RP11-449E21 map 3... 40 6.0
122gb|AC069246.6| Homo sapiens chromosome 3 clone RP11-221A8 map 3p... 40 6.0 
>gb|BT017789.1| Zea mays clone EL01N0504E06.c mRNA sequence
          Length = 1255

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 79/91 (86%)
 Strand = Plus / Minus

                                                                       
Query: 353 tgcagatcttgatgacggaggcgacgccgatgcggtgcaggacgacgacagcatcgccgg 412
           ||||||||||||||||||||||||||||||| || || ||  | ||||  ||||| || |
Sbjct: 861 tgcagatcttgatgacggaggcgacgccgatacgatgaagagccacgatggcatcaccag 802

                                          
Query: 413 ccttgcagagctgcttcttcacggccgactt 443
            ||||||||||||||||| ||||||||||||
Sbjct: 801 gcttgcagagctgcttctgcacggccgactt 771



 Score = 42.1 bits (21), Expect = 1.5
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 193  ggagtcctctccctcctaatttaccagct 221
            ||||||||||||||||  |||||||||||
Sbjct: 1079 ggagtcctctccctccccatttaccagct 1051
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>gb|AY108519.1| Zea mays PCO111031 mRNA sequence
          Length = 835

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 78/93 (83%)
 Strand = Plus / Plus

                                                                       
Query: 353 tgcagatcttgatgacggaggcgacgccgatgcggtgcaggacgacgacagcatcgccgg 412
           ||||||||||||||||||||||||||||||| || || ||  | || |  ||||| || |
Sbjct: 308 tgcagatcttgatgacggaggcgacgccgatacgatggagagccacaatggcatcaccag 367

                                            
Query: 413 ccttgcagagctgcttcttcacggccgacttga 445
            |||||| || ||||||| ||||||||||||||
Sbjct: 368 gcttgcaaagttgcttctgcacggccgacttga 400



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 30/31 (96%)
 Strand = Plus / Plus

                                          
Query: 193 ggagtcctctccctcctaatttaccagctca 223
           ||||||||||||||||| |||||||||||||
Sbjct: 88  ggagtcctctccctcctcatttaccagctca 118
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>ref|XM_474351.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1536

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                        
Query: 353  tgcagatcttgatgacggaggcgacgccgatgcggtgcaggacgacgacagcatcgccgg 412
            ||||||||||||| ||||| |||||||| || ||||||||  | || |||||||| || |
Sbjct: 1525 tgcagatcttgatcacggatgcgacgccaatacggtgcagagcaacaacagcatcaccag 1466

                              
Query: 413  ccttgcagagctgcttct 430
             |||||| | ||||||||
Sbjct: 1465 gcttgcacaactgcttct 1448
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>emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10,
             complete sequence
          Length = 150206

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Plus

                                                                         
Query: 353   tgcagatcttgatgacggaggcgacgccgatgcggtgcaggacgacgacagcatcgccgg 412
             ||||||||||||| ||||| |||||||| || ||||||||  | || |||||||| || |
Sbjct: 95055 tgcagatcttgatcacggatgcgacgccaatacggtgcagagcaacaacagcatcaccag 95114

                               
Query: 413   ccttgcagagctgcttct 430
              |||||| | ||||||||
Sbjct: 95115 gcttgcacaactgcttct 95132
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Plus

                                                                            
Query: 353      tgcagatcttgatgacggaggcgacgccgatgcggtgcaggacgacgacagcatcgccgg 412
                ||||||||||||| ||||| |||||||| || ||||||||  | || |||||||| || |
Sbjct: 34640934 tgcagatcttgatcacggatgcgacgccaatacggtgcagagcaacaacagcatcaccag 34640993

                                  
Query: 413      ccttgcagagctgcttct 430
                 |||||| | ||||||||
Sbjct: 34640994 gcttgcacaactgcttct 34641011
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>dbj|AK100393.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086E07, full
            insert sequence
          Length = 2168

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                        
Query: 353  tgcagatcttgatgacggaggcgacgccgatgcggtgcaggacgacgacagcatcgccgg 412
            ||||||||||||| ||||| |||||||| || ||||||||  | || |||||||| || |
Sbjct: 1823 tgcagatcttgatcacggatgcgacgccaatacggtgcagagcaacaacagcatcaccag 1764

                              
Query: 413  ccttgcagagctgcttct 430
             |||||| | ||||||||
Sbjct: 1763 gcttgcacaactgcttct 1746
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>dbj|AK068805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013157G24, full
            insert sequence
          Length = 2002

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Minus

                                                                        
Query: 353  tgcagatcttgatgacggaggcgacgccgatgcggtgcaggacgacgacagcatcgccgg 412
            ||||||||||||| ||||| |||||||| || ||||||||  | || |||||||| || |
Sbjct: 1637 tgcagatcttgatcacggatgcgacgccaatacggtgcagagcaacaacagcatcaccag 1578

                              
Query: 413  ccttgcagagctgcttct 430
             |||||| | ||||||||
Sbjct: 1577 gcttgcacaactgcttct 1560
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>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete
             sequence
          Length = 100836

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 65/78 (83%)
 Strand = Plus / Plus

                                                                         
Query: 353   tgcagatcttgatgacggaggcgacgccgatgcggtgcaggacgacgacagcatcgccgg 412
             ||||||||||||| ||||| |||||||| || ||||||||  | || |||||||| || |
Sbjct: 46633 tgcagatcttgatcacggatgcgacgccaatacggtgcagagcaacaacagcatcaccag 46692

                               
Query: 413   ccttgcagagctgcttct 430
              |||||| | ||||||||
Sbjct: 46693 gcttgcacaactgcttct 46710
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>gb|BC030770.2| Homo sapiens cDNA clone IMAGE:4813826
          Length = 1156

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                        
Query: 64  tacttcagagttcagaatacaacaagcag 92
           ||||||||||||||| |||||||||||||
Sbjct: 209 tacttcagagttcagtatacaacaagcag 181
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>gb|AC005358.1|AC005358 Homo sapiens chromosome 17, clone hRPK.746_E_8, complete sequence
          Length = 184886

 Score = 50.1 bits (25), Expect = 0.006
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                           
Query: 64     tacttcagagttcagaatacaacaagcag 92
              ||||||||||||||| |||||||||||||
Sbjct: 114241 tacttcagagttcagtatacaacaagcag 114269
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>emb|AL928889.14| Mouse DNA sequence from clone RP23-271L22 on chromosome 2, complete
              sequence
          Length = 197191

 Score = 46.1 bits (23), Expect = 0.097
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 67     ttcagagttcagaatacaacaag 89
              |||||||||||||||||||||||
Sbjct: 147217 ttcagagttcagaatacaacaag 147195
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>gb|AC159257.2| Mus musculus BAC clone RP24-86H20 from chromosome 5, complete sequence
          Length = 202099

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 94     agcagcagctaattagagaaaa 115
              ||||||||||||||||||||||
Sbjct: 161215 agcagcagctaattagagaaaa 161194
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>gb|AY560107.1| HIV-1 isolate 98USHVTN1925c1 from USA, complete genome
          Length = 8934

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  acaacaagcagcagcagcagct 103
           ||||||||||||||||||||||
Sbjct: 553 acaacaagcagcagcagcagct 574
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>gb|AY611368.1| HIV-1 isolate Ac-02 Ac 1b.fa from USA gag protein (gag) gene,
           partial cds
          Length = 447

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  acaacaagcagcagcagcagct 103
           ||||||||||||||||||||||
Sbjct: 345 acaacaagcagcagcagcagct 366
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>gb|AY360916.1| HIV-1 isolate gag16 from United Kingdom gag protein (gag) gene,
           partial cds
          Length = 701

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  acaacaagcagcagcagcagct 103
           ||||||||||||||||||||||
Sbjct: 237 acaacaagcagcagcagcagct 258
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>gb|AY360914.1| HIV-1 isolate gag13 from United Kingdom gag protein (gag) gene,
           partial cds
          Length = 698

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  acaacaagcagcagcagcagct 103
           ||||||||||||||||||||||
Sbjct: 237 acaacaagcagcagcagcagct 258
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>gb|AY206651.1| HIV-1 from USA patient R2 gag protein (gag) gene, complete cds
          Length = 1509

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  acaacaagcagcagcagcagct 103
           ||||||||||||||||||||||
Sbjct: 345 acaacaagcagcagcagcagct 366
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>gb|AC157588.8| Mus musculus BAC clone RP24-95J4 from chromosome 5, complete sequence
          Length = 220137

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 94     agcagcagctaattagagaaaa 115
              ||||||||||||||||||||||
Sbjct: 140928 agcagcagctaattagagaaaa 140949
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 88       agcagcagcagcagctaattagagaa 113
                ||||||||||||||||||||| ||||
Sbjct: 20699663 agcagcagcagcagctaattaaagaa 20699688
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>gb|AF073441.1|AF073441 HIV-1 isolate 053i from USA clone 1 gag protein (gag) gene, partial
           cds
          Length = 571

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  acaacaagcagcagcagcagct 103
           ||||||||||||||||||||||
Sbjct: 321 acaacaagcagcagcagcagct 342
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>gb|AF073440.1|AF073440 HIV-1 isolate 053i from USA clone 10 gag protein (gag) gene,
           partial cds
          Length = 561

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  acaacaagcagcagcagcagct 103
           ||||||||||||||||||||||
Sbjct: 321 acaacaagcagcagcagcagct 342
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>gb|AF073439.1|AF073439 HIV-1 isolate 053i from USA clone 2 gag protein (gag) gene, partial
           cds
          Length = 571

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  acaacaagcagcagcagcagct 103
           ||||||||||||||||||||||
Sbjct: 321 acaacaagcagcagcagcagct 342
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>gb|AF073438.1|AF073438 HIV-1 isolate 053i from USA clone 3 gag protein (gag) gene, partial
           cds
          Length = 571

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  acaacaagcagcagcagcagct 103
           ||||||||||||||||||||||
Sbjct: 321 acaacaagcagcagcagcagct 342
to top
>gb|AF073437.1|AF073437 HIV-1 isolate 053i from USA clone 4 gag protein (gag) gene, partial
           cds
          Length = 571

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  acaacaagcagcagcagcagct 103
           ||||||||||||||||||||||
Sbjct: 321 acaacaagcagcagcagcagct 342
to top
>gb|AF073436.1|AF073436 HIV-1 isolate 053i from USA clone 5 gag protein (gag) gene, partial
           cds
          Length = 553

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  acaacaagcagcagcagcagct 103
           ||||||||||||||||||||||
Sbjct: 321 acaacaagcagcagcagcagct 342
to top
>gb|AF073435.1|AF073435 HIV-1 isolate 053i from USA clone 6 gag protein (gag) gene, partial
           cds
          Length = 561

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  acaacaagcagcagcagcagct 103
           ||||||||||||||||||||||
Sbjct: 321 acaacaagcagcagcagcagct 342
to top
>gb|AF073434.1|AF073434 HIV-1 isolate 053i from USA clone 7 gag protein (gag) gene, partial
           cds
          Length = 571

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  acaacaagcagcagcagcagct 103
           ||||||||||||||||||||||
Sbjct: 321 acaacaagcagcagcagcagct 342
to top
>gb|AF073433.1|AF073433 HIV-1 isolate 053i from USA clone 8 gag protein (gag) gene, partial
           cds
          Length = 569

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  acaacaagcagcagcagcagct 103
           ||||||||||||||||||||||
Sbjct: 321 acaacaagcagcagcagcagct 342
to top
>gb|AF073432.1|AF073432 HIV-1 isolate 053i from USA clone 9 gag protein (gag) gene, partial
           cds
          Length = 569

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 82  acaacaagcagcagcagcagct 103
           ||||||||||||||||||||||
Sbjct: 321 acaacaagcagcagcagcagct 342
to top
>dbj|AP004617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0479C08
          Length = 152460

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 88    agcagcagcagcagctaattagagaa 113
             ||||||||||||||||||||| ||||
Sbjct: 72116 agcagcagcagcagctaattaaagaa 72141
to top
>ref|XM_636726.1| Dictyostelium discoideum hypothetical protein (DDB0218154), partial
            mRNA
          Length = 2779

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 82   acaacaagcagcagcagcagc 102
            |||||||||||||||||||||
Sbjct: 1123 acaacaagcagcagcagcagc 1143
to top
>gb|AC134045.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0022E16
              map C481S, complete sequence
          Length = 179668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 84     aacaagcagcagcagcagcta 104
              |||||||||||||||||||||
Sbjct: 118506 aacaagcagcagcagcagcta 118526
to top
>gb|AY360921.1| HIV-1 isolate gag22 from United Kingdom gag protein (gag) gene,
           partial cds
          Length = 698

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 82  acaacaagcagcagcagcagc 102
           |||||||||||||||||||||
Sbjct: 237 acaacaagcagcagcagcagc 257
to top
>gb|AY049826.1| Dalatias licha internal transcribed spacer 2, and 28S ribosomal RNA
           gene, partial sequence
          Length = 3830

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 82  acaacaagcagcagcagcagc 102
           |||||||||||||||||||||
Sbjct: 293 acaacaagcagcagcagcagc 273
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 380     cgatgcggtgcaggacgacga 400
               |||||||||||||||||||||
Sbjct: 1888826 cgatgcggtgcaggacgacga 1888806
to top
>emb|AL139084.9| Human DNA sequence from clone RP11-318G11 on chromosome 13 Contains
             part of the gene for zizimin1 (KIAA1085) and a ribosomal
             protein L7 (RPL7) pseudogene, complete sequence
          Length = 80803

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 82    acaacaagcagcagcagcagc 102
             |||||||||||||||||||||
Sbjct: 38896 acaacaagcagcagcagcagc 38916
to top
>gb|AC021483.11| Homo sapiens, clone RP11-38G5, complete sequence
          Length = 163065

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 82     acaacaagcagcagcagcagc 102
              |||||||||||||||||||||
Sbjct: 127794 acaacaagcagcagcagcagc 127814
to top
>gb|AC026758.8| Oryza sativa chromosome 10 BAC OSJNBa0015J15 genomic sequence, complete
              sequence
          Length = 144798

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 88     agcagcagcagcagctaatta 108
              |||||||||||||||||||||
Sbjct: 109489 agcagcagcagcagctaatta 109469
to top
>gb|AF480673.1| HIV-1 isolate VT18 from Brazil gag protein (gag) gene, partial cds
          Length = 396

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 82  acaacaagcagcagcagcagc 102
           |||||||||||||||||||||
Sbjct: 273 acaacaagcagcagcagcagc 293
to top
>gb|AC099016.1| Drosophila melanogaster, chromosome 2R, region 56A-56A, BAC clone
              BACR27C21, complete sequence
          Length = 173373

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 82     acaacaagcagcagcagcagc 102
              |||||||||||||||||||||
Sbjct: 164437 acaacaagcagcagcagcagc 164457
to top
>gb|AC008188.4|AC008188 Drosophila melanogaster, chromosome 2R, region 56A2-56B1, BAC clone
             BACR08I18, complete sequence
          Length = 160650

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 82    acaacaagcagcagcagcagc 102
             |||||||||||||||||||||
Sbjct: 30806 acaacaagcagcagcagcagc 30826
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 84       aacaagcagcagcagcagcta 104
                |||||||||||||||||||||
Sbjct: 28159951 aacaagcagcagcagcagcta 28159971



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 84       aacaagcagcagcagcagct 103
                ||||||||||||||||||||
Sbjct: 17651794 aacaagcagcagcagcagct 17651775
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 88       agcagcagcagcagctaatta 108
                |||||||||||||||||||||
Sbjct: 21096217 agcagcagcagcagctaatta 21096237
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 366      gacggaggcgacgccgatgcggtgc 390
                ||||||||||||||||| |||||||
Sbjct: 21820129 gacggaggcgacgccgaggcggtgc 21820105



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 83       caacaagcagcagcagcagc 102
                ||||||||||||||||||||
Sbjct: 30219216 caacaagcagcagcagcagc 30219235
to top
>gb|AC008236.4|AC008236 Drosophila melanogaster, chromosome 3R, region 95A-95A, BAC clone
             BACR24C15, complete sequence
          Length = 162923

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 79    aatacaacaagcagcagcagc 99
             |||||||||||||||||||||
Sbjct: 28192 aatacaacaagcagcagcagc 28212
to top
>gb|AC008235.4|AC008235 Drosophila melanogaster, chromosome 3R, region 94F-95A, BAC clone
              BACR15B19, complete sequence
          Length = 175669

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 79     aatacaacaagcagcagcagc 99
              |||||||||||||||||||||
Sbjct: 140641 aatacaacaagcagcagcagc 140661
to top
>dbj|AP003334.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1114B07
          Length = 148060

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 366   gacggaggcgacgccgatgcggtgc 390
             ||||||||||||||||| |||||||
Sbjct: 49422 gacggaggcgacgccgaggcggtgc 49398
to top
>dbj|AK107352.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-126-H07, full
           insert sequence
          Length = 1344

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 82  acaacaagcagcagcagcagc 102
           |||||||||||||||||||||
Sbjct: 444 acaacaagcagcagcagcagc 464
to top
>gb|AF028568.1|AF028568 HIV-1 isolate 115i clone 14 from Massachusetts, gag protein (gag)
           gene, partial cds
          Length = 432

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 82  acaacaagcagcagcagcagc 102
           |||||||||||||||||||||
Sbjct: 282 acaacaagcagcagcagcagc 302
to top
>gb|AF028563.1|AF028563 HIV-1 isolate 115i clone 7 from Massachusetts, gag protein (gag)
           gene, partial cds
          Length = 416

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 82  acaacaagcagcagcagcagc 102
           |||||||||||||||||||||
Sbjct: 282 acaacaagcagcagcagcagc 302
to top
>dbj|AK062888.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-108-D12, full
           insert sequence
          Length = 685

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 84  aacaagcagcagcagcagcta 104
           |||||||||||||||||||||
Sbjct: 183 aacaagcagcagcagcagcta 203
to top
>emb|CT573072.1| Kuenenia stuttgartiensis genome fragment KUST_D (4 of 5)
          Length = 896449

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 82     acaacaagcagcagcagcagc 102
              |||||||||||||||||||||
Sbjct: 210361 acaacaagcagcagcagcagc 210381
to top
>gb|AE003743.3| Drosophila melanogaster chromosome 3R, section 81 of 118 of the complete
              sequence
          Length = 210258

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 79     aatacaacaagcagcagcagc 99
              |||||||||||||||||||||
Sbjct: 148947 aatacaacaagcagcagcagc 148967
to top
>gb|AE003797.3| Drosophila melanogaster chromosome 2R, section 53 of 73 of the complete
             sequence
          Length = 306854

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 82    acaacaagcagcagcagcagc 102
             |||||||||||||||||||||
Sbjct: 63096 acaacaagcagcagcagcagc 63116
to top
>dbj|AK113476.1| Ciona intestinalis cDNA, clone:ciad060m19, full insert sequence
          Length = 1468

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 83  caacaagcagcagcagcagct 103
           |||||||||||||||||||||
Sbjct: 548 caacaagcagcagcagcagct 568
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 88       agcagcagcagcagctaatta 108
                |||||||||||||||||||||
Sbjct: 21107481 agcagcagcagcagctaatta 21107501
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 84       aacaagcagcagcagcagcta 104
                |||||||||||||||||||||
Sbjct: 28144829 aacaagcagcagcagcagcta 28144849



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 84       aacaagcagcagcagcagct 103
                ||||||||||||||||||||
Sbjct: 17746220 aacaagcagcagcagcagct 17746201
to top
>gb|BT017351.1| Zea mays clone EL01N0323G10.c mRNA sequence
          Length = 1160

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 85   acaagcagcagcagcagcta 104
            ||||||||||||||||||||
Sbjct: 1118 acaagcagcagcagcagcta 1099
to top
>gb|AC136150.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBa0023F12, complete sequence
          Length = 147801

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    aacaagcagcagcagcagct 103
             ||||||||||||||||||||
Sbjct: 61687 aacaagcagcagcagcagct 61668
to top
>gb|BC061056.1| Mus musculus RIKEN cDNA 2010204K13 gene, mRNA (cDNA clone
           IMAGE:6531228)
          Length = 588

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  caacaagcagcagcagcagc 102
           ||||||||||||||||||||
Sbjct: 306 caacaagcagcagcagcagc 287
to top
>gb|BC042200.1| Mus musculus RIKEN cDNA 2010204K13 gene, mRNA (cDNA clone
           IMAGE:6475538)
          Length = 572

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  caacaagcagcagcagcagc 102
           ||||||||||||||||||||
Sbjct: 258 caacaagcagcagcagcagc 239
to top
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 377     cgccgatgcggtgcaggacg 396
               ||||||||||||||||||||
Sbjct: 2358553 cgccgatgcggtgcaggacg 2358534
to top
>ref|XM_368987.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein
           (MG00257.4) partial mRNA
          Length = 1044

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 364 atgacggaggcgacgccgat 383
           ||||||||||||||||||||
Sbjct: 41  atgacggaggcgacgccgat 22
to top
>ref|XM_416321.1| PREDICTED: Gallus gallus similar to FELE-2 (LOC418089), mRNA
          Length = 8862

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 340  catcactggacggtgcagatcttg 363
            ||||||||||| ||||||||||||
Sbjct: 3409 catcactggactgtgcagatcttg 3386
to top
>ref|XM_457868.1| Debaryomyces hansenii CBS767 hypothetical protein (DEHA0C04818g)
           partial mRNA
          Length = 1452

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  agcagcagcagcagctaatt 107
           ||||||||||||||||||||
Sbjct: 540 agcagcagcagcagctaatt 559
to top
>gb|AC117826.10| Mus musculus chromosome 1, clone RP24-81K19, complete sequence
          Length = 227953

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 79    aatacaacaagcagcagcagcagc 102
             |||||||| |||||||||||||||
Sbjct: 55215 aatacaaccagcagcagcagcagc 55192
to top
>ref|XM_714281.1| Candida albicans SC5314 hypothetical protein (CaO19_7613), mRNA
          Length = 858

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 88  agcagcagcagcagctaatt 107
           ||||||||||||||||||||
Sbjct: 429 agcagcagcagcagctaatt 410
to top
>ref|XM_705107.1| Candida albicans SC5314 hypothetical protein (CaO19.9372), mRNA
          Length = 363

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  caacaagcagcagcagcagc 102
           ||||||||||||||||||||
Sbjct: 150 caacaagcagcagcagcagc 169
to top
>ref|XM_705106.1| Candida albicans SC5314 putative peroxisomal peripheral membrane
            protein Pex14 (CaO19.9371), mRNA
          Length = 1275

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   caacaagcagcagcagcagc 102
            ||||||||||||||||||||
Sbjct: 1156 caacaagcagcagcagcagc 1175
to top
>ref|XM_705100.1| Candida albicans SC5314 potential peroxisomal peripheral membrane
            protein Pex14 (CaO19.1805), mRNA
          Length = 1359

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   caacaagcagcagcagcagc 102
            ||||||||||||||||||||
Sbjct: 1144 caacaagcagcagcagcagc 1163
to top
>gb|AC140245.3| Mus musculus BAC clone RP23-293J3 from chromosome 18, complete sequence
          Length = 195082

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     agtacttcagagttcagaat 81
              ||||||||||||||||||||
Sbjct: 106694 agtacttcagagttcagaat 106675
to top
>emb|AL389894.4|LMFLCHR4A Leishmania major Friedlin chromosome 4, left end
          Length = 225394

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 81     tacaacaagcagcagcagca 100
              ||||||||||||||||||||
Sbjct: 190378 tacaacaagcagcagcagca 190359
to top
>gb|AC113490.10| Mus musculus chromosome 1, clone RP23-358M7, complete sequence
          Length = 226924

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    agcagcagcagcagctaatt 107
             ||||||||||||||||||||
Sbjct: 95188 agcagcagcagcagctaatt 95207
to top
>ref|XM_499831.1| Yarrowia lipolytica CLIB122, YALI0A07018g predicted mRNA
          Length = 3411

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   caacaagcagcagcagcagc 102
            ||||||||||||||||||||
Sbjct: 2670 caacaagcagcagcagcagc 2689
to top
>ref|XM_505155.1| Yarrowia lipolytica CLIB122, YALI0F08305g predicted mRNA
          Length = 1545

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   caacaagcagcagcagcagc 102
            ||||||||||||||||||||
Sbjct: 1002 caacaagcagcagcagcagc 1021
to top
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 373     gcgacgccgatgcggtgcag 392
               ||||||||||||||||||||
Sbjct: 1543526 gcgacgccgatgcggtgcag 1543545
to top
>emb|AL357150.7| Human DNA sequence from clone RP11-122C9 on chromosome 1p21.2-22.1
            Contains a ribosomal protein L7 (RPL7) pseudogene, the
            PTBP2 gene for polypyrimidine tract binding protein 2 and
            a CpG island, complete sequence
          Length = 187378

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 15   aaaatcttattattaccacatgtatcga 42
            ||||| ||| ||||||||||||||||||
Sbjct: 1179 aaaattttaatattaccacatgtatcga 1206
to top
>emb|AL355490.24| Human DNA sequence from clone RP11-452K12 on chromosome 10 Contains the
              FRAT1 gene for frequently rearranged in advanced T-cell
              lymphomas, the FRAT2 gene  for frequently rearranged in
              advanced T-cell lymphomas 2, two novel genes, the gene for
              a novel protein (FLJ12434,KIAA0690), the PGAM1 gene for
              phosphoglycerate mutase 1 (brain), the CSL4 gene for
              exosomal core protein CSL4, the ZDHHC16 gene for zinc
              finger, DHHC domain containing 16, the 3' end of the MMS19L
              gene for MMS19-like (MET18 homolog, S. cerevisiae), a
              ribosomal protein L12 (RPL12) pseudogene, a ribosomal
              protein L34 (RPL34) pseudogene and four CpG islands,
              complete sequence
          Length = 190803

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     aagcagcagcagcagctaat 106
              ||||||||||||||||||||
Sbjct: 169993 aagcagcagcagcagctaat 170012
to top
>emb|BX064180.1|CNS09LOO Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC46BD12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 613

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  caacaagcagcagcagcagc 102
           ||||||||||||||||||||
Sbjct: 346 caacaagcagcagcagcagc 365
to top
>emb|BX057922.1|CNS09GUU Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC38AD03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 1017

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  caacaagcagcagcagcagc 102
           ||||||||||||||||||||
Sbjct: 343 caacaagcagcagcagcagc 362
to top
>emb|BX044294.1|CNS096CA Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC17DB12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 769

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  caacaagcagcagcagcagc 102
           ||||||||||||||||||||
Sbjct: 732 caacaagcagcagcagcagc 713
to top
>emb|CR382135.1| Debaryomyces hansenii chromosome C of strain CBS767 of Debaryomyces
              hansenii
          Length = 1592360

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     agcagcagcagcagctaatt 107
              ||||||||||||||||||||
Sbjct: 396391 agcagcagcagcagctaatt 396410
to top
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16
          Length = 349142

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 374    cgacgccgatgcggtgcaggacga 397
              |||||||||||||| |||||||||
Sbjct: 228886 cgacgccgatgcggcgcaggacga 228909
to top
>emb|CR396593.6| Zebrafish DNA sequence from clone CH211-194G1 in linkage group 5,
             complete sequence
          Length = 197143

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    aacaagcagcagcagcagct 103
             ||||||||||||||||||||
Sbjct: 67708 aacaagcagcagcagcagct 67727
to top
>gb|AC113192.3| Homo sapiens chromosome 11, clone RP11-646J21, complete sequence
          Length = 148308

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 84    aacaagcagcagcagcagct 103
             ||||||||||||||||||||
Sbjct: 96317 aacaagcagcagcagcagct 96298
to top
>gb|AC008440.9| Homo sapiens chromosome 19 clone CTC-331H23, complete sequence
          Length = 169997

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 88     agcagcagcagcagctaatt 107
              ||||||||||||||||||||
Sbjct: 161331 agcagcagcagcagctaatt 161312
to top
>tpg|BK002528.1| TPA: TPA_inf: Drosophila melanogaster HDC13464 (HDC13464) gene,
           complete cds
          Length = 692

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  caacaagcagcagcagcagc 102
           ||||||||||||||||||||
Sbjct: 46  caacaagcagcagcagcagc 27
to top
>gb|AC093916.2| Homo sapiens BAC clone RP11-789C2 from 4, complete sequence
          Length = 162632

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 85     acaagcagcagcagcagcta 104
              ||||||||||||||||||||
Sbjct: 113839 acaagcagcagcagcagcta 113858
to top
>gb|AC163764.4| Pan troglodytes BAC clone CH251-169M18 from chromosome unknown,
             complete sequence
          Length = 195947

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    agcagcagcagcagctaatt 107
             ||||||||||||||||||||
Sbjct: 53184 agcagcagcagcagctaatt 53165
to top
>gb|AC156839.4| Pan troglodytes BAC clone CH251-349M12 from chromosome unknown, complete
              sequence
          Length = 190719

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     agcagcagcagcagctaatt 107
              ||||||||||||||||||||
Sbjct: 182860 agcagcagcagcagctaatt 182879
to top
>dbj|AK077356.1| Mus musculus adult male pituitary gland cDNA, RIKEN full-length
           enriched library, clone:5330437E06
           product:unclassifiable, full insert sequence
          Length = 873

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  caacaagcagcagcagcagc 102
           ||||||||||||||||||||
Sbjct: 339 caacaagcagcagcagcagc 320
to top
>dbj|AK002502.1| Mus musculus adult male kidney cDNA, RIKEN full-length enriched
           library, clone:0610010M13 product:hypothetical protein,
           full insert sequence
          Length = 886

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  caacaagcagcagcagcagc 102
           ||||||||||||||||||||
Sbjct: 644 caacaagcagcagcagcagc 625
to top
>dbj|AK008437.1| Mus musculus adult male small intestine cDNA, RIKEN full-length
           enriched library, clone:2010204K13
           product:unclassifiable, full insert sequence
          Length = 538

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  caacaagcagcagcagcagc 102
           ||||||||||||||||||||
Sbjct: 296 caacaagcagcagcagcagc 277
to top
>gb|BC072610.1| Mus musculus RIKEN cDNA 2010204K13 gene, mRNA (cDNA clone
           IMAGE:6407718)
          Length = 490

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  caacaagcagcagcagcagc 102
           ||||||||||||||||||||
Sbjct: 219 caacaagcagcagcagcagc 200
to top
>gb|AC016987.4|AC016987 Homo sapiens chromosome 15, clone RP11-133L19, complete sequence
          Length = 176639

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 79    aatacaacaagcagcagcagcagc 102
             |||||||||| |||||||||||||
Sbjct: 89695 aatacaacaaccagcagcagcagc 89672
to top
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 83       caacaagcagcagcagcagc 102
                ||||||||||||||||||||
Sbjct: 15507373 caacaagcagcagcagcagc 15507354
to top
>gb|AC090942.1|AC090942 Homo sapiens chromosome 3 clone RP11-220D14 map 3p, complete sequence
          Length = 172238

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    agcagcagcagcagctaatt 107
             ||||||||||||||||||||
Sbjct: 31099 agcagcagcagcagctaatt 31118
to top
>gb|AC007650.7|AC007650 Drosophila melanogaster, chromosome 3R, region 87F-87F, BAC clone
              BACR30G22, complete sequence
          Length = 167912

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     caacaagcagcagcagcagc 102
              ||||||||||||||||||||
Sbjct: 112518 caacaagcagcagcagcagc 112499
to top
>gb|AC122920.4| Mus musculus BAC clone RP23-33J11 from chromosome 8, complete sequence
          Length = 229472

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     caacaagcagcagcagcagc 102
              ||||||||||||||||||||
Sbjct: 215389 caacaagcagcagcagcagc 215370



 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     caacaagcagcagcagcagc 102
              ||||||||||||||||||||
Sbjct: 100200 caacaagcagcagcagcagc 100181
to top
>gb|AC143330.4| Mus musculus BAC clone RP23-263D5 from chromosome 6, complete sequence
          Length = 207749

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     aacaagcagcagcagcagct 103
              ||||||||||||||||||||
Sbjct: 163156 aacaagcagcagcagcagct 163175
to top
>gb|AC066589.3|AC066589 Homo sapiens chromosome 3 clone RP11-309M10 map 3p, complete sequence
          Length = 182171

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 88    agcagcagcagcagctaatt 107
             ||||||||||||||||||||
Sbjct: 56001 agcagcagcagcagctaatt 55982
to top
>dbj|AP003343.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0042A10
          Length = 146840

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 83   caacaagcagcagcagcagc 102
            ||||||||||||||||||||
Sbjct: 7535 caacaagcagcagcagcagc 7554
to top
>dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0022F10
          Length = 150498

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     caacaagcagcagcagcagc 102
              ||||||||||||||||||||
Sbjct: 124038 caacaagcagcagcagcagc 124057
to top
>emb|AL929073.19| Mouse DNA sequence from clone RP23-125D6 on chromosome 4, complete
             sequence
          Length = 129246

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 82    acaacaagcagcagcagcagctaa 105
             |||| |||||||||||||||||||
Sbjct: 33205 acaagaagcagcagcagcagctaa 33228
to top
>gb|AY974244.1| Homo sapiens MMS19-like (MET18 homolog, S. cerevisiae) (MMS19L) gene,
             complete cds
          Length = 42517

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    aagcagcagcagcagctaat 106
             ||||||||||||||||||||
Sbjct: 31554 aagcagcagcagcagctaat 31535
to top
>gb|AF038507.1|AF038507 Mus musculus CIP7 (cip7) mRNA, complete cds
          Length = 501

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 83  caacaagcagcagcagcagc 102
           ||||||||||||||||||||
Sbjct: 259 caacaagcagcagcagcagc 240
to top
>gb|M12255.1|MUSTGH2 Mus musculus tRNA-His gene, complete sequence
          Length = 799

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 83  caacaagcagcagcagcagc 102
           ||||||||||||||||||||
Sbjct: 576 caacaagcagcagcagcagc 595
to top
>gb|AE003701.2| Drosophila melanogaster chromosome 3R, section 39 of 118 of the complete
              sequence
          Length = 208368

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 83     caacaagcagcagcagcagc 102
              ||||||||||||||||||||
Sbjct: 186661 caacaagcagcagcagcagc 186642
to top
>emb|BX629354.1|CNS09SBQ Tetraodon nigroviridis BAC sequence
          Length = 95048

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    caacaagcagcagcagcagc 102
             ||||||||||||||||||||
Sbjct: 60538 caacaagcagcagcagcagc 60519
to top
>gb|AC116724.13| Mus musculus chromosome 15, clone RP23-267E9, complete sequence
          Length = 136996

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 87    aagcagcagcagcagctaat 106
             ||||||||||||||||||||
Sbjct: 83826 aagcagcagcagcagctaat 83807
to top
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 83       caacaagcagcagcagcagc 102
                ||||||||||||||||||||
Sbjct: 15461655 caacaagcagcagcagcagc 15461636
to top
>emb|BX276100.4|CNS09S4X Oryza sativa chromosome 12, . Partial sequence from BAC OSJNBa0076H14
            of library OSJNBa from chromosome 12 of cultivar
            Nipponbare of ssp. japonica of Oryza sativa (rice),
            complete sequence
          Length = 53315

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 83   caacaagcagcagcagcagc 102
            ||||||||||||||||||||
Sbjct: 1210 caacaagcagcagcagcagc 1191
to top
>gb|AC132444.3| Mus musculus BAC clone RP23-160D6 from 8, complete sequence
          Length = 206961

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     caacaagcagcagcagcagc 102
              ||||||||||||||||||||
Sbjct: 118611 caacaagcagcagcagcagc 118630
to top
>gb|AC131696.4| Mus musculus BAC clone RP23-403E5 from 1, complete sequence
          Length = 214068

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 83    caacaagcagcagcagcagc 102
             ||||||||||||||||||||
Sbjct: 85788 caacaagcagcagcagcagc 85807
to top
>emb|AL929075.5| Zebrafish DNA sequence from clone CH211-132B9 in linkage group 5,
            complete sequence
          Length = 195380

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 84   aacaagcagcagcagcagct 103
            ||||||||||||||||||||
Sbjct: 5998 aacaagcagcagcagcagct 5979
to top
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 83      caacaagcagcagcagcagc 102
               ||||||||||||||||||||
Sbjct: 1164718 caacaagcagcagcagcagc 1164699
to top
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica
          Length = 2303261

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     caacaagcagcagcagcagc 102
              ||||||||||||||||||||
Sbjct: 682970 caacaagcagcagcagcagc 682989
to top
>emb|AL663104.17| Mouse DNA sequence from clone RP23-207H18 on chromosome X, complete
              sequence
          Length = 211462

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     caacaagcagcagcagcagc 102
              ||||||||||||||||||||
Sbjct: 186031 caacaagcagcagcagcagc 186050
to top
>emb|AL591970.10| Mouse DNA sequence from clone RP23-190L21 on chromosome 2, complete
              sequence
          Length = 165908

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 83     caacaagcagcagcagcagc 102
              ||||||||||||||||||||
Sbjct: 104894 caacaagcagcagcagcagc 104913
to top
>emb|X76583.1|HSRWG1F9 H.sapiens simple DNA sequence region clone wg1f9
          Length = 184

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 79  aatacaacaagcagcagcagcagc 102
           |||||||||| |||||||||||||
Sbjct: 5   aatacaacaaccagcagcagcagc 28
to top
>gb|AC027124.5| Homo sapiens chromosome 3 clone RP11-449E21 map 3p, complete sequence
          Length = 208989

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 88   agcagcagcagcagctaatt 107
            ||||||||||||||||||||
Sbjct: 1134 agcagcagcagcagctaatt 1153
to top
>gb|AC069246.6| Homo sapiens chromosome 3 clone RP11-221A8 map 3p, complete sequence
          Length = 175121

 Score = 40.1 bits (20), Expect = 6.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 88   agcagcagcagcagctaatt 107
            ||||||||||||||||||||
Sbjct: 1909 agcagcagcagcagctaatt 1890


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,342,264
Number of Sequences: 3902068
Number of extensions: 4342264
Number of successful extensions: 272005
Number of sequences better than 10.0: 122
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 270022
Number of HSP's gapped (non-prelim): 1978
length of query: 445
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 423
effective length of database: 17,147,199,772
effective search space: 7253265503556
effective search space used: 7253265503556
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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