Clone Information

BLAST Search Result

Clone Name	rbart42e05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	UREG_SYNY3 (P72955) Urease accessory protein ureG	65	9e-11
2	UREG_HAEIN (P44396) Urease accessory protein ureG	64	2e-10
3	UREG_ACTPL (O54424) Urease accessory protein ureG	64	3e-10
4	UREG_BORPA (P0A4R8) Urease accessory protein ureG	63	4e-10
5	UREG_BORBR (P0A4R7) Urease accessory protein ureG	63	4e-10
6	UREG_ECOLI (Q03287) Urease accessory protein ureG	62	1e-09
7	UREG_HELPY (Q09066) Urease accessory protein ureG	61	1e-09
8	UREG_HELPJ (Q9ZMZ7) Urease accessory protein ureG	61	1e-09
9	UREG_PROMI (Q06206) Urease accessory protein ureG	60	3e-09
10	UREG_YERPS (P69993) Urease accessory protein ureG	59	5e-09
11	UREG_YERPE (P69992) Urease accessory protein ureG	59	5e-09
12	UREG_YEREN (P42871) Urease accessory protein ureG	59	8e-09
13	UREG_MYCTU (P0A664) Urease accessory protein ureG	55	9e-08
14	UREG_MYCBO (P0A665) Urease accessory protein ureG	55	9e-08
15	UREG_KLEAE (P18319) Urease accessory protein ureG	55	1e-07
16	UREG_BACSB (Q07403) Urease accessory protein ureG	50	2e-06
17	HYPB_METJA (Q57884) Probable hydrogenase nickel incorporation pr...	47	3e-05
18	UREG_STAXY (P42877) Urease accessory protein ureG	45	7e-05
19	UREG_UREPA (Q56561) Urease accessory protein ureG	44	2e-04
20	UREG_STRSL (Q55057) Urease accessory protein ureG	44	3e-04
21	IF2_CHRVO (Q7NY13) Translation initiation factor IF-2	38	0.015
22	PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regu...	36	0.058
23	LEPA_BACSU (P37949) GTP-binding protein lepA	33	0.49
24	IF2_LEPIN (Q8F7K1) Translation initiation factor IF-2	32	0.64
25	LEPA_BACHK (Q6HDK2) GTP-binding protein lepA	32	0.64
26	LEPA_BACCZ (Q634M2) GTP-binding protein lepA	32	0.64
27	LEPA_BACC1 (Q730L6) GTP-binding protein lepA	32	0.64
28	LEPA_BACAN (Q81LR7) GTP-binding protein lepA	32	0.64
29	LEPA_BACHD (Q9KD76) GTP-binding protein lepA	32	0.64
30	RS3_STRAW (Q82DN9) 30S ribosomal protein S3	32	0.83
31	LEPA_LACSS (Q38W39) GTP-binding protein lepA	32	0.83
32	LEPA_STRA5 (P65274) GTP-binding protein lepA	32	1.1
33	LEPA_STRA3 (P65273) GTP-binding protein lepA	32	1.1
34	LEPA_STRA1 (Q3K1F9) GTP-binding protein lepA	32	1.1
35	LEPA_BACSK (Q5WHG5) GTP-binding protein lepA	31	1.4
36	LEPA_BACLD (Q65H50) GTP-binding protein lepA	31	1.4
37	LEPA_STRP3 (Q8K7M8) GTP-binding protein lepA	31	1.4
38	IF2_LEPIC (Q72NX3) Translation initiation factor IF-2	31	1.9
39	LEPA_STRR6 (Q8DPN5) GTP-binding protein lepA	31	1.9
40	LEPA_STRPN (Q97QK5) GTP-binding protein lepA	31	1.9
41	VE2_HPV09 (P36780) Regulatory protein E2	31	1.9
42	LEPA_STRPM (Q48TU0) GTP-binding protein lepA	31	1.9
43	LEPA_STRP6 (Q5XCD2) GTP-binding protein lepA	31	1.9
44	LEPA_STRP1 (Q99ZV8) GTP-binding protein lepA	31	1.9
45	LEPA_BACCR (Q818E4) GTP-binding protein lepA	30	2.4
46	ENGA_ECOL6 (Q8FF59) GTP-binding protein engA	30	2.4
47	LEPA_GEOKA (Q5KWZ3) GTP-binding protein lepA	30	3.2
48	LEPA_THET8 (Q5SKA7) GTP-binding protein lepA	30	3.2
49	LEPA_THET2 (Q72KV2) GTP-binding protein lepA	30	3.2
50	LEPA_OCEIH (Q8CXD0) GTP-binding protein lepA	30	4.1
51	YO43_CAEEL (P34681) Hypothetical protein ZK757.3	30	4.1
52	LEPA_STRMU (Q8DTF3) GTP-binding protein lepA	30	4.1
53	RDRP_AHNNV (Q9DIC5) RNA-directed RNA polymerase (EC 2.7.7.48) (R...	30	4.1
54	LEPA_STRT2 (Q5M4M2) GTP-binding protein lepA	30	4.1
55	LEPA_STRT1 (Q5M008) GTP-binding protein lepA	30	4.1
56	AKP8L_HUMAN (Q9ULX6) A-kinase anchor protein 8-like (AKAP8-like ...	30	4.1
57	TARA_MOUSE (Q99KW3) TRIO and F-actin-binding protein (Protein Ta...	29	5.4
58	IF2_MANSM (Q65SK9) Translation initiation factor IF-2	29	5.4
59	Y2483_CAUCR (P37895) Hypothetical protein CC2483	29	5.4
60	ENGA_SALTY (Q9XCI8) GTP-binding protein engA	29	5.4
61	ENGA_SALTI (Q8Z4P6) GTP-binding protein engA	29	5.4
62	ENGA_ECOLI (P0A6P5) GTP-binding protein engA (Double era-like do...	29	5.4
63	ENGA_ECO57 (P0A6P6) GTP-binding protein engA	29	5.4
64	LEPA_LACLA (Q9CGI8) GTP-binding protein lepA	29	7.1
65	YO13_CAEEL (P34669) Hypothetical protein ZK686.3 in chromosome III	29	7.1
66	COBW_PSEDE (P29937) Protein cobW	29	7.1
67	FIBA_HUMAN (P02671) Fibrinogen alpha chain precursor [Contains: ...	29	7.1
68	CTGE2_HUMAN (Q96RT6) Protein cTAGE-2	29	7.1
69	ATKA_STAAW (Q8NVI1) Potassium-transporting ATPase A chain (EC 3....	29	7.1
70	ATKA_STAAS (Q6G7N2) Potassium-transporting ATPase A chain (EC 3....	29	7.1
71	ATKA_STAAC (Q5HEC3) Potassium-transporting ATPase A chain (EC 3....	29	7.1
72	ATKA1_STAAR (Q6GEZ6) Potassium-transporting ATPase A chain 1 (EC...	29	7.1
73	ATKA1_STAAN (Q7A4G4) Potassium-transporting ATPase A chain 1 (EC...	29	7.1
74	ATKA1_STAAM (Q99SH9) Potassium-transporting ATPase A chain 1 (EC...	29	7.1
75	ECH14_MYCTU (P64018) Probable enoyl-CoA hydratase echA14 (EC 4.2...	28	9.2
76	ECH14_MYCBO (P64019) Probable enoyl-CoA hydratase echA14 (EC 4.2...	28	9.2
77	AKP8L_MOUSE (Q9R0L7) A-kinase anchor protein 8-like (AKAP8-like ...	28	9.2

>UREG_SYNY3 (P72955) Urease accessory protein ureG|
          Length = 206

 Score = 65.1 bits (157), Expect = 9e-11
 Identities = 32/56 (57%), Positives = 40/56 (71%)
 Frame = -2

Query: 473 ITQADLLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHV 306
           IT++DLLVINK DLA  VGADL +M+RDA +MR   PFVF  +K   G+  +VD V
Sbjct: 140 ITKSDLLVINKIDLAPMVGADLGIMDRDAKKMRGEKPFVFTNLKTATGLSTVVDFV 195

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>UREG_HAEIN (P44396) Urease accessory protein ureG|
          Length = 225

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 31/53 (58%), Positives = 40/53 (75%)
 Frame = -2

Query: 473 ITQADLLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIV 315
           IT++DLLVINKTDLA  VGADL+VMERDA RMR G PF+F  +     ++ ++
Sbjct: 153 ITRSDLLVINKTDLAPFVGADLSVMERDARRMRNGQPFIFTNLMKKENLDGVI 205

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>UREG_ACTPL (O54424) Urease accessory protein ureG|
          Length = 211

 Score = 63.5 bits (153), Expect = 3e-10
 Identities = 30/53 (56%), Positives = 40/53 (75%)
 Frame = -2

Query: 473 ITQADLLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIV 315
           I+++DLLVINKTDLA  VGADL+VMERDA RMR G PF+F  +     ++ ++
Sbjct: 139 ISRSDLLVINKTDLAPFVGADLSVMERDARRMRNGQPFIFTNLMKNENLDGVI 191

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>UREG_BORPA (P0A4R8) Urease accessory protein ureG|
          Length = 214

 Score = 62.8 bits (151), Expect = 4e-10
 Identities = 30/53 (56%), Positives = 39/53 (73%)
 Frame = -2

Query: 473 ITQADLLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIV 315
           IT++DL +INKTDLA  VGADLAVME D  RMR   PFV   +K G G+++++
Sbjct: 151 ITKSDLFIINKTDLAPYVGADLAVMEADTRRMRGDKPFVMCNLKTGDGLDQVI 203

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>UREG_BORBR (P0A4R7) Urease accessory protein ureG|
          Length = 214

 Score = 62.8 bits (151), Expect = 4e-10
 Identities = 30/53 (56%), Positives = 39/53 (73%)
 Frame = -2

Query: 473 ITQADLLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIV 315
           IT++DL +INKTDLA  VGADLAVME D  RMR   PFV   +K G G+++++
Sbjct: 151 ITKSDLFIINKTDLAPYVGADLAVMEADTRRMRGDKPFVMCNLKTGDGLDQVI 203

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>UREG_ECOLI (Q03287) Urease accessory protein ureG|
          Length = 205

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 31/57 (54%), Positives = 39/57 (68%)
 Frame = -2

Query: 473 ITQADLLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVL 303
           IT +DLLVINK DLA  VGA L VME D  RMR   P+VF  +K  VG+E I++ ++
Sbjct: 142 ITHSDLLVINKIDLAPYVGASLEVMEADTARMRPVKPYVFTNLKKKVGLETIIEFII 198

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>UREG_HELPY (Q09066) Urease accessory protein ureG|
          Length = 199

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 29/58 (50%), Positives = 42/58 (72%)
 Frame = -2

Query: 473 ITQADLLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLR 300
           IT++DLLVINK DLA  VGADL VMERD+ +MR   PF+F  ++   G+++++  + R
Sbjct: 136 ITRSDLLVINKIDLAPYVGADLKVMERDSKKMRGEKPFIFTNIRAKEGLDDVIAWIKR 193

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>UREG_HELPJ (Q9ZMZ7) Urease accessory protein ureG|
          Length = 199

 Score = 61.2 bits (147), Expect = 1e-09
 Identities = 29/58 (50%), Positives = 42/58 (72%)
 Frame = -2

Query: 473 ITQADLLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLR 300
           IT++DLLVINK DLA  VGADL VMERD+ +MR   PF+F  ++   G+++++  + R
Sbjct: 136 ITRSDLLVINKIDLAPYVGADLKVMERDSKKMRGEKPFIFTNIRAKEGLDDVIAWIKR 193

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>UREG_PROMI (Q06206) Urease accessory protein ureG|
          Length = 205

 Score = 60.1 bits (144), Expect = 3e-09
 Identities = 29/57 (50%), Positives = 38/57 (66%)
 Frame = -2

Query: 473 ITQADLLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVL 303
           IT  D++VINK DLA  VGA L VME D  +MR   P+VF  +K  VG+E I+D ++
Sbjct: 142 ITHPDMMVINKIDLAPYVGASLEVMEADTAKMRPVKPYVFTNLKEKVGLETIIDFII 198

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>UREG_YERPS (P69993) Urease accessory protein ureG|
          Length = 220

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 29/58 (50%), Positives = 38/58 (65%)
 Frame = -2

Query: 473 ITQADLLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLR 300
           + QAD+LVINK DLA  VGA L VME D   +R   P++    K G G+EE+VD ++R
Sbjct: 149 LVQADILVINKIDLAPYVGASLDVMESDTKVVRGNRPYILTNCKTGQGIEELVDMIMR 206

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>UREG_YERPE (P69992) Urease accessory protein ureG|
          Length = 220

 Score = 59.3 bits (142), Expect = 5e-09
 Identities = 29/58 (50%), Positives = 38/58 (65%)
 Frame = -2

Query: 473 ITQADLLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLR 300
           + QAD+LVINK DLA  VGA L VME D   +R   P++    K G G+EE+VD ++R
Sbjct: 149 LVQADILVINKIDLAPYVGASLDVMESDTKVVRGNRPYILTNCKTGQGIEELVDMIMR 206

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>UREG_YEREN (P42871) Urease accessory protein ureG|
          Length = 221

 Score = 58.5 bits (140), Expect = 8e-09
 Identities = 29/58 (50%), Positives = 38/58 (65%)
 Frame = -2

Query: 473 ITQADLLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLR 300
           + QAD+LVINK DLA  VGA L VME D   +R   P++    K G G+EE+VD ++R
Sbjct: 150 LVQADILVINKIDLAPYVGASLDVMESDTKVVRGERPYILTNCKTGQGIEELVDMIMR 207

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>UREG_MYCTU (P0A664) Urease accessory protein ureG|
          Length = 224

 Score = 55.1 bits (131), Expect = 9e-08
 Identities = 27/53 (50%), Positives = 36/53 (67%)
 Frame = -2

Query: 473 ITQADLLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIV 315
           +T +DLLV+NKTDLA+ VGADLAVM RDA  +R+G P V   +       ++V
Sbjct: 160 VTYSDLLVVNKTDLAALVGADLAVMARDADAVRDGRPTVLQSLTEDPAASDVV 212

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>UREG_MYCBO (P0A665) Urease accessory protein ureG|
          Length = 224

 Score = 55.1 bits (131), Expect = 9e-08
 Identities = 27/53 (50%), Positives = 36/53 (67%)
 Frame = -2

Query: 473 ITQADLLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIV 315
           +T +DLLV+NKTDLA+ VGADLAVM RDA  +R+G P V   +       ++V
Sbjct: 160 VTYSDLLVVNKTDLAALVGADLAVMARDADAVRDGRPTVLQSLTEDPAASDVV 212

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>UREG_KLEAE (P18319) Urease accessory protein ureG|
          Length = 205

 Score = 54.7 bits (130), Expect = 1e-07
 Identities = 28/53 (52%), Positives = 34/53 (64%)
 Frame = -2

Query: 473 ITQADLLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIV 315
           IT++D LVINKTDLA  VGA L VM  D  RMR   P+ F  +K G G+  I+
Sbjct: 142 ITKSDFLVINKTDLAPYVGASLEVMASDTQRMRGDRPWTFTNLKQGDGLSTII 194

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>UREG_BACSB (Q07403) Urease accessory protein ureG|
          Length = 204

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 23/51 (45%), Positives = 33/51 (64%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHV 306
           L +INK DLA  VGA L VMERD L  R   P++F  +K  +G+ E+++ +
Sbjct: 143 LFIINKIDLAPYVGASLEVMERDTLAARGDKPYIFTNLKDEIGLAEVLEWI 193

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>HYPB_METJA (Q57884) Probable hydrogenase nickel incorporation protein hypB|
          Length = 221

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 23/53 (43%), Positives = 33/53 (62%)
 Frame = -2

Query: 464 ADLLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHV 306
           ADL+VINK DLA AVGAD+  ME DA R+      V   +K   G +++++ +
Sbjct: 161 ADLIVINKIDLADAVGADIKKMENDAKRINPDAEVVLLSLKTMEGFDKVLEFI 213

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>UREG_STAXY (P42877) Urease accessory protein ureG|
          Length = 204

 Score = 45.4 bits (106), Expect = 7e-05
 Identities = 22/54 (40%), Positives = 31/54 (57%)
 Frame = -2

Query: 467 QADLLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHV 306
           ++D  VINKTDLA  VGA L  M  D    R   PF F  +K   G++E+++ +
Sbjct: 141 KSDFFVINKTDLAPYVGASLERMAEDTKVFRGNRPFTFTNLKTDEGLDEVIEWI 194

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>UREG_UREPA (Q56561) Urease accessory protein ureG|
          Length = 206

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 21/61 (34%), Positives = 36/61 (59%)
 Frame = -2

Query: 467 QADLLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAWEI 288
           ++DL +INK DLA  VGA++ VM+ D L+ R    F    +K   G++ + D + +  ++
Sbjct: 142 KSDLFIINKVDLAPYVGANVEVMKADTLKSRGNKDFFVTNLKTDEGLKSVADWIEKRLQL 201

Query: 287 A 285
           A
Sbjct: 202 A 202

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>UREG_STRSL (Q55057) Urease accessory protein ureG|
          Length = 204

 Score = 43.5 bits (101), Expect = 3e-04
 Identities = 21/54 (38%), Positives = 32/54 (59%)
 Frame = -2

Query: 467 QADLLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHV 306
           ++DL +INKTDLA  VGA+L  M  D L  R    F+F  + +   V+E+ + +
Sbjct: 142 KSDLFLINKTDLAPYVGANLDRMREDTLHFRNEDSFIFTNLNNDDNVKEVEEWI 195

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>IF2_CHRVO (Q7NY13) Translation initiation factor IF-2|
          Length = 964

 Score = 37.7 bits (86), Expect = 0.015
 Identities = 29/70 (41%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
 Frame = -1

Query: 453 GHKQDGPRLRGWS----RPSRDGTR-RPSNAGRRALRLCPGETRGWRGGDRGPRATGLGD 289
           G+   GPR  G      RP  D    RP+ AG R  R  PG      G +RGPR  G GD
Sbjct: 247 GNDNRGPRPAGAGDRGPRPGGDNRGPRPAGAGDRGPR--PG------GDNRGPRPAGAGD 298

Query: 288 RDRQPAPIEA 259
           R  +PAP  A
Sbjct: 299 RGPRPAPAAA 308

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>PP1RA_XENLA (Q6GLQ4) Serine/threonine-protein phosphatase 1 regulatory subunit|
           10
          Length = 819

 Score = 35.8 bits (81), Expect = 0.058
 Identities = 21/44 (47%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = -1

Query: 438 GPRLRGWSRPSRDGT-RRPSNAGRRALRLCPGETRGWRGGDRGP 310
           GPR+ G   P RDG    P N   R      GE  G RGGDRGP
Sbjct: 675 GPRMMGPPPPQRDGYWEPPPNENLRGGSHHGGERGGMRGGDRGP 718

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>LEPA_BACSU (P37949) GTP-binding protein lepA|
          Length = 612

 Score = 32.7 bits (73), Expect = 0.49
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAWEIATG 279
           L VINK DL SA    +     D + + +    V A  K G+G+EEI++ ++      TG
Sbjct: 137 LPVINKIDLPSAEPERVRQEVEDVIGL-DASEAVLASAKAGIGIEEILEQIVEKVPAPTG 195

Query: 278 N 276
           +
Sbjct: 196 D 196

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>IF2_LEPIN (Q8F7K1) Translation initiation factor IF-2|
          Length = 880

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 2/71 (2%)
 Frame = -1

Query: 474 YNPGRSSGHKQDGPRLRGWSRP-SRDGTRRPSNAGRRALRLCPGETRGWRGGDRGPRATG 298
           Y P RS   K+D   +   SRP  R G  RP++ G       PG+  G   G+RGP   G
Sbjct: 128 YPPSRSPFQKEDSNIIV--SRPIQRTGPSRPNSGGGYQGNRGPGQGGGGYQGNRGPGQGG 185

Query: 297 LG-DRDRQPAP 268
            G   +R P P
Sbjct: 186 GGYQGNRGPGP 196



 Score = 28.5 bits (62), Expect = 9.2
 Identities = 23/70 (32%), Positives = 27/70 (38%), Gaps = 2/70 (2%)
 Frame = -1

Query: 468 PGRSSGHKQD--GPRLRGWSRPSRDGTRRPSNAGRRALRLCPGETRGWRGGDRGPRATGL 295
           PG+  G  Q   GP   G       G       G       PG+  G   G+RGPR+ G 
Sbjct: 168 PGQGGGGYQGNRGPGQGGGGYQGNRGPGPGQGGGGYQGNRGPGQGGGGYQGNRGPRSGGT 227

Query: 294 GDRDRQPAPI 265
           G R   P PI
Sbjct: 228 GTR---PMPI 234

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>LEPA_BACHK (Q6HDK2) GTP-binding protein lepA|
          Length = 607

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAWEIATG 279
           L VINK DL SA    +     D + + +    V A  K G+G+EEI++ ++      TG
Sbjct: 136 LPVINKIDLPSADPERVRQEVEDVIGL-DASEAVLASAKAGIGIEEILEQIVEKVPAPTG 194

Query: 278 N 276
           +
Sbjct: 195 D 195

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>LEPA_BACCZ (Q634M2) GTP-binding protein lepA|
          Length = 607

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAWEIATG 279
           L VINK DL SA    +     D + + +    V A  K G+G+EEI++ ++      TG
Sbjct: 136 LPVINKIDLPSADPERVRQEVEDVIGL-DASEAVLASAKAGIGIEEILEQIVEKVPAPTG 194

Query: 278 N 276
           +
Sbjct: 195 D 195

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>LEPA_BACC1 (Q730L6) GTP-binding protein lepA|
          Length = 607

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAWEIATG 279
           L VINK DL SA    +     D + + +    V A  K G+G+EEI++ ++      TG
Sbjct: 136 LPVINKIDLPSADPERVRQEVEDVIGL-DASEAVLASAKAGIGIEEILEQIVEKVPAPTG 194

Query: 278 N 276
           +
Sbjct: 195 D 195

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>LEPA_BACAN (Q81LR7) GTP-binding protein lepA|
          Length = 607

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 20/61 (32%), Positives = 31/61 (50%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAWEIATG 279
           L VINK DL SA    +     D + + +    V A  K G+G+EEI++ ++      TG
Sbjct: 136 LPVINKIDLPSADPERVRQEVEDVIGL-DASEAVLASAKAGIGIEEILEQIVEKVPAPTG 194

Query: 278 N 276
           +
Sbjct: 195 D 195

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>LEPA_BACHD (Q9KD76) GTP-binding protein lepA|
          Length = 609

 Score = 32.3 bits (72), Expect = 0.64
 Identities = 19/61 (31%), Positives = 32/61 (52%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAWEIATG 279
           L VINK DL SA    +     D + + +    V A  K+G+G+EEI++ ++      +G
Sbjct: 136 LPVINKIDLPSAEPERVRQEVEDVIGL-DASEAVLASAKNGIGIEEILEQIVEKVPAPSG 194

Query: 278 N 276
           +
Sbjct: 195 D 195

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>RS3_STRAW (Q82DN9) 30S ribosomal protein S3|
          Length = 275

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 21/61 (34%), Positives = 29/61 (47%)
 Frame = -1

Query: 426 RGWSRPSRDGTRRPSNAGRRALRLCPGETRGWRGGDRGPRATGLGDRDRQPAPIEAPSCA 247
           R  +RP+R G  RP+  GR       G  RG RG  R P+     +  +  AP  AP+ +
Sbjct: 220 RAGNRPARGGADRPARGGR-------GGERGGRG--RKPQQAPAAEAPKAEAPAAAPAES 270

Query: 246 T 244
           T
Sbjct: 271 T 271

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>LEPA_LACSS (Q38W39) GTP-binding protein lepA|
          Length = 612

 Score = 32.0 bits (71), Expect = 0.83
 Identities = 20/59 (33%), Positives = 31/59 (52%)
 Frame = -2

Query: 452 VINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAWEIATGN 276
           VINK DL SA   D+   E + +   +    V A  K G+G+EEI++ ++      TG+
Sbjct: 138 VINKIDLPSAQ-PDVVKAEIEEMIGLDASEAVLASAKSGIGIEEILEKLVTDVPAPTGD 195

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>LEPA_STRA5 (P65274) GTP-binding protein lepA|
          Length = 610

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAWEIATG 279
           L VINK DL +A    +     D + + +    V A  K G+G+EEI++ ++      TG
Sbjct: 136 LPVINKIDLPAADPERVRAEVEDVIGL-DASEAVLASAKAGIGIEEILEQIVEKVPAPTG 194

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>LEPA_STRA3 (P65273) GTP-binding protein lepA|
          Length = 610

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAWEIATG 279
           L VINK DL +A    +     D + + +    V A  K G+G+EEI++ ++      TG
Sbjct: 136 LPVINKIDLPAADPERVRAEVEDVIGL-DASEAVLASAKAGIGIEEILEQIVEKVPAPTG 194

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>LEPA_STRA1 (Q3K1F9) GTP-binding protein lepA|
          Length = 610

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 19/60 (31%), Positives = 30/60 (50%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAWEIATG 279
           L VINK DL +A    +     D + + +    V A  K G+G+EEI++ ++      TG
Sbjct: 136 LPVINKIDLPAADPERVRAEVEDVIGL-DASEAVLASAKAGIGIEEILEQIVEKVPAPTG 194

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>LEPA_BACSK (Q5WHG5) GTP-binding protein lepA|
          Length = 607

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVL 303
           L VINK DL SA    +     D + + +    V A  K+G+G+E+I++ V+
Sbjct: 136 LPVINKIDLPSAEPERVKKEVEDVIGL-DASDAVLASAKNGIGIEDILEQVV 186

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>LEPA_BACLD (Q65H50) GTP-binding protein lepA|
          Length = 612

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAWEIATG 279
           L VINK DL SA    +     D + + +    V A  K G+G+EEI++ ++      +G
Sbjct: 137 LPVINKIDLPSAEPERVRQEVEDVIGL-DASEAVLASAKAGIGIEEILEQIVEKVPAPSG 195

Query: 278 N 276
           +
Sbjct: 196 D 196

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>LEPA_STRP3 (Q8K7M8) GTP-binding protein lepA|
          Length = 610

 Score = 31.2 bits (69), Expect = 1.4
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAWEIATG 279
           L VINK DL +A    +     D + + +    V A  K G+G+EEI++ ++      TG
Sbjct: 136 LPVINKIDLPAADPERVCHEVEDVIGL-DASEAVLASAKAGIGIEEILEQIVEKVPAPTG 194

Query: 278 N 276
           +
Sbjct: 195 D 195

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>IF2_LEPIC (Q72NX3) Translation initiation factor IF-2|
          Length = 891

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = -1

Query: 474 YNPGRSSGHKQDGPRLRGWSRP-SRDGTRRPSNAGRRALRLCPGETRGWRGGDRGPRATG 298
           Y P RS   K+D   +   SRP  R G  RP++ G       PG+  G   G+RGP   G
Sbjct: 128 YPPSRSPFQKEDSNIIV--SRPIQRTGPSRPNSGGGYQGNRGPGQGGGGYQGNRGPGQGG 185

Query: 297 LG 292
            G
Sbjct: 186 GG 187



 Score = 29.6 bits (65), Expect = 4.1
 Identities = 25/69 (36%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
 Frame = -1

Query: 468 PGRSSGHKQDGPRLRGWSRPSRDGTRRPSNAGRRAL-RLCPGETRGWRGGDRGPRATGLG 292
           PG+  G  Q G R  G       G R P   G        PG+  G   G+RGPR+ G G
Sbjct: 181 PGQGGGGYQ-GNRGPGQGGGGYQGNRGPGQGGGGYQGNRGPGQGGGGYQGNRGPRSGGTG 239

Query: 291 DRDRQPAPI 265
            R   P PI
Sbjct: 240 TR---PMPI 245

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>LEPA_STRR6 (Q8DPN5) GTP-binding protein lepA|
          Length = 607

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -2

Query: 452 VINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAWEIATGN 276
           +INK DL +A    +     D + + +    V A  K G+G+EEI++ ++      TG+
Sbjct: 138 IINKIDLPAADPERVRTEIEDVIGL-DASEAVLASAKAGIGIEEILEQIVEKVPAPTGD 195

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>LEPA_STRPN (Q97QK5) GTP-binding protein lepA|
          Length = 607

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 17/59 (28%), Positives = 30/59 (50%)
 Frame = -2

Query: 452 VINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAWEIATGN 276
           +INK DL +A    +     D + + +    V A  K G+G+EEI++ ++      TG+
Sbjct: 138 IINKIDLPAADPERVRTEIEDVIGL-DASEAVLASAKAGIGIEEILEQIVEKVPAPTGD 195

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>VE2_HPV09 (P36780) Regulatory protein E2|
          Length = 461

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 16/52 (30%), Positives = 23/52 (44%)
 Frame = -1

Query: 465 GRSSGHKQDGPRLRGWSRPSRDGTRRPSNAGRRALRLCPGETRGWRGGDRGP 310
           G  + +++   R +G +   R G RR       A    P + R  RGG RGP
Sbjct: 269 GEETNYRRQRSRSKGRTETERGGERRRRGRSSSADSTTPTDRRRGRGGGRGP 320

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>LEPA_STRPM (Q48TU0) GTP-binding protein lepA|
          Length = 610

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAWEIATG 279
           L VINK DL +A    +     D + + +    V A  K G+G+EEI++ ++      TG
Sbjct: 136 LPVINKIDLPAADPERVRHEVEDVIGL-DASEAVLASAKAGIGIEEILEQIVEKVPAPTG 194

Query: 278 N 276
           +
Sbjct: 195 D 195

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>LEPA_STRP6 (Q5XCD2) GTP-binding protein lepA|
          Length = 610

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAWEIATG 279
           L VINK DL +A    +     D + + +    V A  K G+G+EEI++ ++      TG
Sbjct: 136 LPVINKIDLPAADPERVRHEVEDVIGL-DASEAVLASAKAGIGIEEILEQIVEKVPAPTG 194

Query: 278 N 276
           +
Sbjct: 195 D 195

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>LEPA_STRP1 (Q99ZV8) GTP-binding protein lepA|
          Length = 610

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAWEIATG 279
           L VINK DL +A    +     D + + +    V A  K G+G+EEI++ ++      TG
Sbjct: 136 LPVINKIDLPAADPERVRHEVEDVIGL-DASEAVLASAKAGIGIEEILEQIVEKVPAPTG 194

Query: 278 N 276
           +
Sbjct: 195 D 195

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>LEPA_BACCR (Q818E4) GTP-binding protein lepA|
          Length = 607

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 18/52 (34%), Positives = 28/52 (53%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVL 303
           L VINK DL SA    +     D + + +    V A  K G+G+EEI++ ++
Sbjct: 136 LPVINKIDLPSADPERVRQEVEDVIGL-DASEAVLASAKAGIGIEEILEQIV 186

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>ENGA_ECOL6 (Q8FF59) GTP-binding protein engA|
          Length = 490

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 21/54 (38%), Positives = 28/54 (51%)
 Frame = -2

Query: 455 LVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAW 294
           LV NKTD    +  D AV++  AL + E  P       HG GV  +++HVL  W
Sbjct: 115 LVANKTD---GLDPDQAVVDFYALGLGEIYPIA---ASHGRGVLSLLEHVLLPW 162

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>LEPA_GEOKA (Q5KWZ3) GTP-binding protein lepA|
          Length = 609

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 19/61 (31%), Positives = 31/61 (50%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAWEIATG 279
           L VINK DL SA    +     D + + +    V A  K G+G+EEI++ ++      +G
Sbjct: 136 LPVINKIDLPSAEPERVRQEIEDVIGL-DASDAVLASAKVGIGIEEILEKIVEKIPAPSG 194

Query: 278 N 276
           +
Sbjct: 195 D 195

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>LEPA_THET8 (Q5SKA7) GTP-binding protein lepA|
          Length = 610

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 18/51 (35%), Positives = 30/51 (58%)
 Frame = -2

Query: 452 VINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLR 300
           VINK DL +A   ++A+   + L +      +FA  K G GVEEI++ +++
Sbjct: 134 VINKIDLPNARPLEVALEVEEVLGL-PADEAIFASGKTGEGVEEILEAIVQ 183

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>LEPA_THET2 (Q72KV2) GTP-binding protein lepA|
          Length = 610

 Score = 30.0 bits (66), Expect = 3.2
 Identities = 18/51 (35%), Positives = 30/51 (58%)
 Frame = -2

Query: 452 VINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLR 300
           VINK DL +A   ++A+   + L +      +FA  K G GVEEI++ +++
Sbjct: 134 VINKIDLPNARPLEVALEVEEVLGL-PADEAIFASGKTGEGVEEILEAIVQ 183

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>LEPA_OCEIH (Q8CXD0) GTP-binding protein lepA|
          Length = 602

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 17/49 (34%), Positives = 26/49 (53%)
 Frame = -2

Query: 452 VINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHV 306
           VINK DL SA    +     D L + +G   + A  K  +G+EEI++ +
Sbjct: 133 VINKIDLPSADTEKVKKELEDVLGI-DGDDVILASAKANIGIEEILERI 180

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>YO43_CAEEL (P34681) Hypothetical protein ZK757.3|
          Length = 1040

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 17/44 (38%), Positives = 21/44 (47%)
 Frame = -1

Query: 417 SRPSRDGTRRPSNAGRRALRLCPGETRGWRGGDRGPRATGLGDR 286
           S+P+R+  R P   G       PG  RG RGG RG      G+R
Sbjct: 324 SKPNRNNPRGPGGPGG------PGGYRGGRGGGRGGSYGNFGNR 361

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>LEPA_STRMU (Q8DTF3) GTP-binding protein lepA|
          Length = 611

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVL 303
           L VINK DL +A    +     D + + +    V A  K G+G+EEI++ ++
Sbjct: 136 LPVINKIDLPAADPERVRTEIEDVIGL-DASEAVLASAKAGIGIEEILEQIV 186

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>RDRP_AHNNV (Q9DIC5) RNA-directed RNA polymerase (EC 2.7.7.48) (RdRp) (RNA|
            replicase) (Protein A)
          Length = 981

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 22/69 (31%), Positives = 27/69 (39%), Gaps = 2/69 (2%)
 Frame = -1

Query: 453  GHKQDGPRLRGWSRPSRD--GTRRPSNAGRRALRLCPGETRGWRGGDRGPRATGLGDRDR 280
            G  Q GP  +   +   +  G R      R AL    G TR  R  DRGP       RD+
Sbjct: 878  GEVQAGPSQQQTDKDGTNPTGDRSAPRRARTALPGVDGHTRCTRRSDRGPGERDANVRDK 937

Query: 279  QPAPIEAPS 253
            +P     PS
Sbjct: 938  RPRRSMPPS 946

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>LEPA_STRT2 (Q5M4M2) GTP-binding protein lepA|
          Length = 610

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVL 303
           L VINK DL +A    +     D + + +    V A  K G+G+EEI++ ++
Sbjct: 137 LPVINKIDLPAADPERVRTEIEDVIGL-DASEAVLASAKAGIGIEEILEQIV 187

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>LEPA_STRT1 (Q5M008) GTP-binding protein lepA|
          Length = 610

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 17/52 (32%), Positives = 28/52 (53%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVL 303
           L VINK DL +A    +     D + + +    V A  K G+G+EEI++ ++
Sbjct: 137 LPVINKIDLPAADPERVRTEIEDVIGL-DASEAVLASAKAGIGIEEILEQIV 187

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>AKP8L_HUMAN (Q9ULX6) A-kinase anchor protein 8-like (AKAP8-like protein)|
           (Neighbor of A-kinase anchoring protein 95) (Neighbor of
           AKAP95) (Homologous to AKAP95 protein) (HA95) (Helicase
           A-binding protein 95) (HAP95)
          Length = 646

 Score = 29.6 bits (65), Expect = 4.1
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = -1

Query: 462 RSSGHKQDGPRLRGWSRPSRDGTRRPSNAGR 370
           R  G+   GPR +GW+R +R G    S  GR
Sbjct: 169 RMRGNDTFGPRAQGWARDARSGRPMASGYGR 199

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>TARA_MOUSE (Q99KW3) TRIO and F-actin-binding protein (Protein Tara)|
            (Trio-associated repeat on actin)
          Length = 2014

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 28/99 (28%), Positives = 38/99 (38%), Gaps = 13/99 (13%)
 Frame = -1

Query: 471  NPGRSSGHKQDGPRLRGWSR---PSRDGT-RRPSNAGRRALRLCPGETRGWR----GGDR 316
            +P +S G +++GP L GW     PS +G  R P    R       G +  W      G +
Sbjct: 1105 HPEKSWGSQKEGPSLGGWPELEGPSLEGIWRGPPQEHREQW----GHSEAWEEPPSNGIQ 1160

Query: 315  GPRATGLG-----DRDRQPAPIEAPSCAT*FSVMCSCRP 214
            G    G G      R  QP P    S A      C+ +P
Sbjct: 1161 GAPPRGQGRLQELSRPHQPTPSSENSWAGPAECSCALQP 1199

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>IF2_MANSM (Q65SK9) Translation initiation factor IF-2|
          Length = 820

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 17/61 (27%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
 Frame = -2

Query: 458 LLVINKTDL--ASAVGADLAVMERDALRMREGGP--FVFAQVKHGVGVEEIVDHVLRAWE 291
           ++ +NK D   A+    +  +++ D +  + GG   FV+   K G GV+E++D +L   E
Sbjct: 425 VVAVNKIDKPEANPDRVEQELLQYDVVSEKFGGDTQFVYVSAKKGTGVDELLDAILLQSE 484

Query: 290 I 288
           +
Sbjct: 485 V 485

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>Y2483_CAUCR (P37895) Hypothetical protein CC2483|
          Length = 326

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 25/75 (33%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
 Frame = -2

Query: 473 ITQADLLVINKTDLASAVGADLAVMERDALRMREGG------PFVFAQVKHGVGVEEIVD 312
           I  ADLLVINK D   A     A   R+AL +          P + A    G G++ +  
Sbjct: 191 IELADLLVINKADADPAKAERSARDYRNALHILTPAHPDWTPPVLTASGLTGQGLDVLWT 250

Query: 311 HVLRAWEIATGNRRR 267
            +LR  E+ T N  R
Sbjct: 251 QILRHREVMTANGAR 265

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>ENGA_SALTY (Q9XCI8) GTP-binding protein engA|
          Length = 490

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = -2

Query: 455 LVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAW 294
           LV NKTD    +  D AV++  +L + E  P       HG GV  +++HVL  W
Sbjct: 115 LVANKTD---GLDPDQAVVDFYSLGLGEIYPIA---ASHGRGVLSLLEHVLLPW 162

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>ENGA_SALTI (Q8Z4P6) GTP-binding protein engA|
          Length = 490

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = -2

Query: 455 LVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAW 294
           LV NKTD    +  D AV++  +L + E  P       HG GV  +++HVL  W
Sbjct: 115 LVANKTD---GLDPDQAVVDFYSLGLGEIYPIA---ASHGRGVLSLLEHVLLPW 162

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>ENGA_ECOLI (P0A6P5) GTP-binding protein engA (Double era-like domain protein)|
          Length = 490

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = -2

Query: 455 LVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAW 294
           LV NKTD    +  D AV++  +L + E  P       HG GV  +++HVL  W
Sbjct: 115 LVANKTD---GLDPDQAVVDFYSLGLGEIYPIA---ASHGRGVLSLLEHVLLPW 162

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>ENGA_ECO57 (P0A6P6) GTP-binding protein engA|
          Length = 490

 Score = 29.3 bits (64), Expect = 5.4
 Identities = 20/54 (37%), Positives = 28/54 (51%)
 Frame = -2

Query: 455 LVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVLRAW 294
           LV NKTD    +  D AV++  +L + E  P       HG GV  +++HVL  W
Sbjct: 115 LVANKTD---GLDPDQAVVDFYSLGLGEIYPIA---ASHGRGVLSLLEHVLLPW 162

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>LEPA_LACLA (Q9CGI8) GTP-binding protein lepA|
          Length = 607

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 16/52 (30%), Positives = 29/52 (55%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVGVEEIVDHVL 303
           L VINK DL +A   ++   E + +   +    + A  K G+G+EEI++ ++
Sbjct: 136 LPVINKIDLPAA-DPEMVRQEIEDVIGLDASEAILASAKAGIGIEEILEQIV 186

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>YO13_CAEEL (P34669) Hypothetical protein ZK686.3 in chromosome III|
          Length = 331

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 17/53 (32%), Positives = 29/53 (54%)
 Frame = +3

Query: 114 MLQSTHRYFSACGTKRRVVYSGAKGRPAPQFTRVGDMNT*PKIKWHMMEPLSA 272
           ++ ++HRY S+ G +R+V +       APQ  +  ++NT P I +H    L A
Sbjct: 76  IVANSHRYTSSEGDRRKVFFGIVDYEDAPQIFQQMNLNTAP-ILYHFGPKLGA 127

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>COBW_PSEDE (P29937) Protein cobW|
          Length = 353

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 17/46 (36%), Positives = 23/46 (50%)
 Frame = -2

Query: 473 ITQADLLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHG 336
           +T ADL+V+NKTDL  A G       RD +  R        + K+G
Sbjct: 178 LTAADLIVLNKTDLIDASGLKAV---RDEVSSRTSRKPTMIEAKNG 220

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>FIBA_HUMAN (P02671) Fibrinogen alpha chain precursor [Contains: Fibrinopeptide|
           A]
          Length = 866

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 20/59 (33%), Positives = 25/59 (42%)
 Frame = -1

Query: 474 YNPGRSSGHKQDGPRLRGWSRPSRDGTRRPSNAGRRALRLCPGETRGWRGGDRGPRATG 298
           +N G SSG    G R  G S      T +P ++G       PG T  W  G  G  +TG
Sbjct: 295 WNSG-SSGPGSTGNRNPGSSGTGGTATWKPGSSG-------PGSTGSWNSGSSGTGSTG 345

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>CTGE2_HUMAN (Q96RT6) Protein cTAGE-2|
          Length = 754

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 24/77 (31%), Positives = 26/77 (33%), Gaps = 9/77 (11%)
 Frame = -1

Query: 450 HKQDGPRLRGWSRPSRDGTRRPSNAGRRALRLCPGETRGWRGGDRGP---------RATG 298
           H   GP   GW       +  P       LRL P   RG   G RGP         +  G
Sbjct: 485 HSPYGPSPLGWPSSETRASLYPPTLLEGPLRLSPLLPRGGGRGSRGPGNPPDHQITKERG 544

Query: 297 LGDRDRQPAPIEAPSCA 247
               DR   P  APS A
Sbjct: 545 ESSCDRLTDPHRAPSDA 561

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>ATKA_STAAW (Q8NVI1) Potassium-transporting ATPase A chain (EC 3.6.3.12)|
           (Potassium-translocating ATPase A chain) (ATP
           phosphohydrolase [potassium-transporting] A chain)
           (Potassium-binding and translocating subunit A)
          Length = 558

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = +1

Query: 37  PRTLHLIKLHRKNSPHCIRVQFVAAECCKAHTVIFQHAVLNGAWFIRGRKEDPLHNLHVW 216
           P+TLH   + R  S H   + F      ++     +H   NG  F+ G    P  N ++W
Sbjct: 191 PQTLHANLMIRTLSGHIQHIAFGPIASLES----IKHLGTNGGGFLAGNSATPFENPNIW 246

Query: 217 A 219
           +
Sbjct: 247 S 247

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>ATKA_STAAS (Q6G7N2) Potassium-transporting ATPase A chain (EC 3.6.3.12)|
           (Potassium-translocating ATPase A chain) (ATP
           phosphohydrolase [potassium-transporting] A chain)
           (Potassium-binding and translocating subunit A)
          Length = 558

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = +1

Query: 37  PRTLHLIKLHRKNSPHCIRVQFVAAECCKAHTVIFQHAVLNGAWFIRGRKEDPLHNLHVW 216
           P+TLH   + R  S H   + F      ++     +H   NG  F+ G    P  N ++W
Sbjct: 191 PQTLHANLMIRTLSGHIQHIAFGPIASLES----IKHLGTNGGGFLAGNSATPFENPNIW 246

Query: 217 A 219
           +
Sbjct: 247 S 247

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>ATKA_STAAC (Q5HEC3) Potassium-transporting ATPase A chain (EC 3.6.3.12)|
           (Potassium-translocating ATPase A chain) (ATP
           phosphohydrolase [potassium-transporting] A chain)
           (Potassium-binding and translocating subunit A)
          Length = 558

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = +1

Query: 37  PRTLHLIKLHRKNSPHCIRVQFVAAECCKAHTVIFQHAVLNGAWFIRGRKEDPLHNLHVW 216
           P+TLH   + R  S H   + F      ++     +H   NG  F+ G    P  N ++W
Sbjct: 191 PQTLHANLMIRTLSGHIQHIAFGPIASLES----IKHLGTNGGGFLAGNSATPFENPNIW 246

Query: 217 A 219
           +
Sbjct: 247 S 247

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>ATKA1_STAAR (Q6GEZ6) Potassium-transporting ATPase A chain 1 (EC 3.6.3.12)|
           (Potassium-translocating ATPase A chain 1) (ATP
           phosphohydrolase [potassium-transporting] A chain 1)
           (Potassium-binding and translocating subunit A 1)
          Length = 558

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = +1

Query: 37  PRTLHLIKLHRKNSPHCIRVQFVAAECCKAHTVIFQHAVLNGAWFIRGRKEDPLHNLHVW 216
           P+TLH   + R  S H   + F      ++     +H   NG  F+ G    P  N ++W
Sbjct: 191 PQTLHANLMIRTLSGHIQHIAFGPIASLES----IKHLGTNGGGFLAGNSATPFENPNIW 246

Query: 217 A 219
           +
Sbjct: 247 S 247

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>ATKA1_STAAN (Q7A4G4) Potassium-transporting ATPase A chain 1 (EC 3.6.3.12)|
           (Potassium-translocating ATPase A chain 1) (ATP
           phosphohydrolase [potassium-transporting] A chain 1)
           (Potassium-binding and translocating subunit A 1)
          Length = 558

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = +1

Query: 37  PRTLHLIKLHRKNSPHCIRVQFVAAECCKAHTVIFQHAVLNGAWFIRGRKEDPLHNLHVW 216
           P+TLH   + R  S H   + F      ++     +H   NG  F+ G    P  N ++W
Sbjct: 191 PQTLHANLMIRTLSGHIQHIAFGPIASLES----IKHLGTNGGGFLAGNSATPFENPNIW 246

Query: 217 A 219
           +
Sbjct: 247 S 247

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>ATKA1_STAAM (Q99SH9) Potassium-transporting ATPase A chain 1 (EC 3.6.3.12)|
           (Potassium-translocating ATPase A chain 1) (ATP
           phosphohydrolase [potassium-transporting] A chain 1)
           (Potassium-binding and translocating subunit A 1)
          Length = 558

 Score = 28.9 bits (63), Expect = 7.1
 Identities = 16/61 (26%), Positives = 26/61 (42%)
 Frame = +1

Query: 37  PRTLHLIKLHRKNSPHCIRVQFVAAECCKAHTVIFQHAVLNGAWFIRGRKEDPLHNLHVW 216
           P+TLH   + R  S H   + F      ++     +H   NG  F+ G    P  N ++W
Sbjct: 191 PQTLHANLMIRTLSGHIQHIAFGPIASLES----IKHLGTNGGGFLAGNSATPFENPNIW 246

Query: 217 A 219
           +
Sbjct: 247 S 247

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>ECH14_MYCTU (P64018) Probable enoyl-CoA hydratase echA14 (EC 4.2.1.17)|
          Length = 256

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVG 330
           L+ +N  D  +AV  +++   R A++  EG P V A V  G G
Sbjct: 17  LITVNDPDRRNAVTDEMSAQLRAAIQRAEGDPDVHAVVVTGAG 59

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>ECH14_MYCBO (P64019) Probable enoyl-CoA hydratase echA14 (EC 4.2.1.17)|
          Length = 256

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = -2

Query: 458 LLVINKTDLASAVGADLAVMERDALRMREGGPFVFAQVKHGVG 330
           L+ +N  D  +AV  +++   R A++  EG P V A V  G G
Sbjct: 17  LITVNDPDRRNAVTDEMSAQLRAAIQRAEGDPDVHAVVVTGAG 59

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>AKP8L_MOUSE (Q9R0L7) A-kinase anchor protein 8-like (AKAP8-like protein)|
           (Neighbor of A-kinase-anchoring protein 95) (Neighbor of
           AKAP95)
          Length = 642

 Score = 28.5 bits (62), Expect = 9.2
 Identities = 13/31 (41%), Positives = 16/31 (51%)
 Frame = -1

Query: 462 RSSGHKQDGPRLRGWSRPSRDGTRRPSNAGR 370
           R  G    GPR +GW+R +R G    S  GR
Sbjct: 170 RMRGGDTFGPRAQGWARDARSGRPMASGYGR 200


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,249,191
Number of Sequences: 219361
Number of extensions: 1652962
Number of successful extensions: 3695
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 3555
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3684
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3130907202
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result