ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart42e05
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK104368.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
2dbj|AK104200.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
3dbj|AK067090.1| Oryza sativa (japonica cultivar-group) cDNA clon... 131 2e-27
4gb|AY106295.1| Zea mays PCO130711 mRNA sequence 109 8e-21
5gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome... 80 7e-12
6dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 80 7e-12
7ref|NM_128999.2| Arabidopsis thaliana UREG; metal ion binding / ... 48 0.026
8ref|NM_001036404.1| Arabidopsis thaliana UREG; metal ion binding... 48 0.026
9gb|BT005276.1| Arabidopsis thaliana At2g34470 mRNA, complete cds 48 0.026
10gb|AY085812.1| Arabidopsis thaliana clone 18513 mRNA, complete s... 48 0.026
11dbj|AK119138.1| Arabidopsis thaliana At2g34470 mRNA for putative... 48 0.026
12gb|AF109374.1|AF109374 Arabidopsis thaliana urease accessory pro... 48 0.026
13gb|AC060809.7| Homo sapiens chromosome 15, clone RP11-404B13, co... 42 1.6
14gb|AC023034.9| Homo sapiens, clone RP11-499F3, complete sequence 42 1.6
15gb|AC104121.3| Homo sapiens chromosome 5 clone RP11-408O10, comp... 42 1.6
16emb|AJ272525.1|STU272525 Solanum tuberosum mRNA for urease acces... 42 1.6
17emb|AJ272524.1|STU272524 Solanum tuberosum mRNA for urease acces... 42 1.6
18emb|AL591032.19| Mouse DNA sequence from clone RP22-211A10 on ch... 42 1.6
19emb|AL606969.26| Mouse DNA sequence from clone RP23-331P21 on ch... 42 1.6
20ref|XM_363311.1| Magnaporthe grisea 70-15 hypothetical protein (... 40 6.4
21dbj|AP001625.1| Homo sapiens genomic DNA, chromosome 21, clone:K... 40 6.4
22dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113 40 6.4
23dbj|BS000228.1| Pan troglodytes chromosome 22 clone:RP43-139F08,... 40 6.4
24emb|BX072532.7| Zebrafish DNA sequence from clone CH211-10B9 in ... 40 6.4
25emb|CR759879.17| Zebrafish DNA sequence from clone DKEYP-117B8 i... 40 6.4
26dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 40 6.4
27dbj|AP004606.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 6.4 
>dbj|AK104368.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-035-E04, full
           insert sequence
          Length = 1095

 Score =  131 bits (66), Expect = 2e-27
 Identities = 165/198 (83%)
 Strand = Plus / Minus

                                                                       
Query: 276 gttgccggtcgcgatctcccaggcccgtagcacgtggtccacgatctcctccacgccaac 335
           ||||||||| ||||||||||| ||  | || | ||||| ||| || ||||||||||| ||
Sbjct: 870 gttgccggtggcgatctcccaagcttgcaggatgtggttcacaatttcctccacgccgac 811

                                                                       
Query: 336 cccgtgtttcacctgggcaaagacgaagggccctccttcccgcattcgaagggcgtctcg 395
            || ||||||||||| |||||||| || ||||||||||||||||| ||||| || |||||
Sbjct: 810 tccatgtttcacctgtgcaaagacaaaaggccctccttcccgcatgcgaagcgcatctcg 751

                                                                       
Query: 396 ttccatcacggctaggtcggctccaaccgcggaggcgaggtccgtcttgtttatgaccag 455
           |||||| || || ||||| |||||||| || |  || ||||| ||||||||||| | || 
Sbjct: 750 ttccattacagccaggtcagctccaactgctggtgcaaggtctgtcttgtttattatcaa 691

                             
Query: 456 aagatctgcctgggttat 473
           ||||||||| ||||||||
Sbjct: 690 aagatctgcttgggttat 673
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>dbj|AK104200.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-B01, full
           insert sequence
          Length = 1095

 Score =  131 bits (66), Expect = 2e-27
 Identities = 165/198 (83%)
 Strand = Plus / Minus

                                                                       
Query: 276 gttgccggtcgcgatctcccaggcccgtagcacgtggtccacgatctcctccacgccaac 335
           ||||||||| ||||||||||| ||  | || | ||||| ||| || ||||||||||| ||
Sbjct: 870 gttgccggtggcgatctcccaagcttgcaggatgtggttcacaatttcctccacgccgac 811

                                                                       
Query: 336 cccgtgtttcacctgggcaaagacgaagggccctccttcccgcattcgaagggcgtctcg 395
            || ||||||||||| |||||||| || ||||||||||||||||| ||||| || |||||
Sbjct: 810 tccatgtttcacctgtgcaaagacaaaaggccctccttcccgcatgcgaagcgcatctcg 751

                                                                       
Query: 396 ttccatcacggctaggtcggctccaaccgcggaggcgaggtccgtcttgtttatgaccag 455
           |||||| || || ||||| |||||||| || |  || ||||| ||||||||||| | || 
Sbjct: 750 ttccattacagccaggtcagctccaactgctggtgcaaggtctgtcttgtttattatcaa 691

                             
Query: 456 aagatctgcctgggttat 473
           ||||||||| ||||||||
Sbjct: 690 aagatctgcttgggttat 673
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>dbj|AK067090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013095M05, full
           insert sequence
          Length = 1167

 Score =  131 bits (66), Expect = 2e-27
 Identities = 165/198 (83%)
 Strand = Plus / Minus

                                                                       
Query: 276 gttgccggtcgcgatctcccaggcccgtagcacgtggtccacgatctcctccacgccaac 335
           ||||||||| ||||||||||| ||  | || | ||||| ||| || ||||||||||| ||
Sbjct: 880 gttgccggtggcgatctcccaagcttgcaggatgtggttcacaatttcctccacgccgac 821

                                                                       
Query: 336 cccgtgtttcacctgggcaaagacgaagggccctccttcccgcattcgaagggcgtctcg 395
            || ||||||||||| |||||||| || ||||||||||||||||| ||||| || |||||
Sbjct: 820 tccatgtttcacctgtgcaaagacaaaaggccctccttcccgcatgcgaagcgcatctcg 761

                                                                       
Query: 396 ttccatcacggctaggtcggctccaaccgcggaggcgaggtccgtcttgtttatgaccag 455
           |||||| || || ||||| |||||||| || |  || ||||| ||||||||||| | || 
Sbjct: 760 ttccattacagccaggtcagctccaactgctggtgcaaggtctgtcttgtttattatcaa 701

                             
Query: 456 aagatctgcctgggttat 473
           ||||||||| ||||||||
Sbjct: 700 aagatctgcttgggttat 683
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>gb|AY106295.1| Zea mays PCO130711 mRNA sequence
          Length = 1173

 Score =  109 bits (55), Expect = 8e-21
 Identities = 157/191 (82%)
 Strand = Plus / Minus

                                                                       
Query: 283 gtcgcgatctcccaggcccgtagcacgtggtccacgatctcctccacgccaaccccgtgt 342
           |||||||||||||| ||| | || |  |||| ||||||| |||||||||| || || |||
Sbjct: 920 gtcgcgatctcccacgcctgcagaatatggttcacgatcccctccacgcccactccatgt 861

                                                                       
Query: 343 ttcacctgggcaaagacgaagggccctccttcccgcattcgaagggcgtctcgttccatc 402
           |||||||| ||||| || |||||||||||||| ||||| ||||| |||||||| ||||| 
Sbjct: 860 ttcacctgtgcaaacacaaagggccctccttcgcgcatgcgaagtgcgtctcgctccatt 801

                                                                       
Query: 403 acggctaggtcggctccaaccgcggaggcgaggtccgtcttgtttatgaccagaagatct 462
           || |  || || |||||||| || |  || ||||| ||||||||||| ||||  ||||| 
Sbjct: 800 acagacagatcagctccaacagcaggtgctaggtctgtcttgtttattaccaacagatcg 741

                      
Query: 463 gcctgggttat 473
           |||||||||||
Sbjct: 740 gcctgggttat 730
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>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02,
              complete sequence
          Length = 157106

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                          
Query: 346    acctgggcaaagacgaagggccctccttcccgcattcgaagggcgtctcgttccatcacg 405
              ||||| |||||||| || ||||||||||||||||| ||||| || ||||||||||| || 
Sbjct: 137666 acctgtgcaaagacaaaaggccctccttcccgcatgcgaagcgcatctcgttccattaca 137607

                                                          
Query: 406    gctaggtcggctccaaccgcggaggcgaggtccgtcttgtttat 449
              || ||||| |||||||| || |  || ||||| |||||||||||
Sbjct: 137606 gccaggtcagctccaactgctggtgcaaggtctgtcttgtttat 137563



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                          
Query: 276    gttgccggtcgcgatctcccaggcccgtagcacgtggtccacgatctcctccacgccaac 335
              ||||||||| ||||||||||| ||  | || | ||||| ||| || ||||||||||| ||
Sbjct: 137857 gttgccggtggcgatctcccaagcttgcaggatgtggttcacaatttcctccacgccgac 137798

                              
Query: 336    cccgtgtttcacctgg 351
               || ||||||||||||
Sbjct: 137797 tccatgtttcacctgg 137782
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 79.8 bits (40), Expect = 7e-12
 Identities = 88/104 (84%)
 Strand = Plus / Minus

                                                                            
Query: 346      acctgggcaaagacgaagggccctccttcccgcattcgaagggcgtctcgttccatcacg 405
                ||||| |||||||| || ||||||||||||||||| ||||| || ||||||||||| || 
Sbjct: 27907249 acctgtgcaaagacaaaaggccctccttcccgcatgcgaagcgcatctcgttccattaca 27907190

                                                            
Query: 406      gctaggtcggctccaaccgcggaggcgaggtccgtcttgtttat 449
                || ||||| |||||||| || |  || ||||| |||||||||||
Sbjct: 27907189 gccaggtcagctccaactgctggtgcaaggtctgtcttgtttat 27907146



 Score = 48.1 bits (24), Expect = 0.026
 Identities = 63/76 (82%)
 Strand = Plus / Minus

                                                                            
Query: 276      gttgccggtcgcgatctcccaggcccgtagcacgtggtccacgatctcctccacgccaac 335
                ||||||||| ||||||||||| ||  | || | ||||| ||| || ||||||||||| ||
Sbjct: 27907440 gttgccggtggcgatctcccaagcttgcaggatgtggttcacaatttcctccacgccgac 27907381

                                
Query: 336      cccgtgtttcacctgg 351
                 || ||||||||||||
Sbjct: 27907380 tccatgtttcacctgg 27907365
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>ref|NM_128999.2| Arabidopsis thaliana UREG; metal ion binding / nickel ion binding /
           nucleotide binding AT2G34470 (UREG) transcript variant
           AT2G34470.1 mRNA, complete cds
          Length = 1086

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 120/152 (78%)
 Strand = Plus / Minus

                                                                       
Query: 310 tggtccacgatctcctccacgccaaccccgtgtttcacctgggcaaagacgaagggccct 369
           |||| |||||| ||||| || |||| ||| || |||||||| |||||||| || ||||||
Sbjct: 876 tggttcacgatttcctcgactccaagcccatgcttcacctgagcaaagacaaatggccct 817

                                                                       
Query: 370 ccttcccgcattcgaagggcgtctcgttccatcacggctaggtcggctccaaccgcggag 429
           || || ||||| || || |  || | |||||| || | || ||| || ||||| || |  
Sbjct: 816 ccatcacgcatgcgtagtgaatccctttccatgaccgataagtcagccccaacagctgct 757

                                           
Query: 430 gcgaggtccgtcttgtttatgaccagaagatc 461
           || ||||| ||||||||||| |||||||||||
Sbjct: 756 gcaaggtcagtcttgtttatcaccagaagatc 725
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>ref|NM_001036404.1| Arabidopsis thaliana UREG; metal ion binding / nickel ion binding /
           nucleotide binding AT2G34470 (UREG) transcript variant
           AT2G34470.2 mRNA, complete cds
          Length = 1090

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 120/152 (78%)
 Strand = Plus / Minus

                                                                       
Query: 310 tggtccacgatctcctccacgccaaccccgtgtttcacctgggcaaagacgaagggccct 369
           |||| |||||| ||||| || |||| ||| || |||||||| |||||||| || ||||||
Sbjct: 879 tggttcacgatttcctcgactccaagcccatgcttcacctgagcaaagacaaatggccct 820

                                                                       
Query: 370 ccttcccgcattcgaagggcgtctcgttccatcacggctaggtcggctccaaccgcggag 429
           || || ||||| || || |  || | |||||| || | || ||| || ||||| || |  
Sbjct: 819 ccatcacgcatgcgtagtgaatccctttccatgaccgataagtcagccccaacagctgct 760

                                           
Query: 430 gcgaggtccgtcttgtttatgaccagaagatc 461
           || ||||| ||||||||||| |||||||||||
Sbjct: 759 gcaaggtcagtcttgtttatcaccagaagatc 728
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>gb|BT005276.1| Arabidopsis thaliana At2g34470 mRNA, complete cds
          Length = 828

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 120/152 (78%)
 Strand = Plus / Minus

                                                                       
Query: 310 tggtccacgatctcctccacgccaaccccgtgtttcacctgggcaaagacgaagggccct 369
           |||| |||||| ||||| || |||| ||| || |||||||| |||||||| || ||||||
Sbjct: 782 tggttcacgatttcctcgactccaagcccatgcttcacctgagcaaagacaaatggccct 723

                                                                       
Query: 370 ccttcccgcattcgaagggcgtctcgttccatcacggctaggtcggctccaaccgcggag 429
           || || ||||| || || |  || | |||||| || | || ||| || ||||| || |  
Sbjct: 722 ccatcacgcatgcgtagtgaatccctttccatgaccgataagtcagccccaacagctgct 663

                                           
Query: 430 gcgaggtccgtcttgtttatgaccagaagatc 461
           || ||||| ||||||||||| |||||||||||
Sbjct: 662 gcaaggtcagtcttgtttatcaccagaagatc 631
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>gb|AY085812.1| Arabidopsis thaliana clone 18513 mRNA, complete sequence
          Length = 1081

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 120/152 (78%)
 Strand = Plus / Minus

                                                                       
Query: 310 tggtccacgatctcctccacgccaaccccgtgtttcacctgggcaaagacgaagggccct 369
           |||| |||||| ||||| || |||| ||| || |||||||| |||||||| || ||||||
Sbjct: 876 tggttcacgatttcctcgactccaagcccatgcttcacctgagcaaagacaaatggccct 817

                                                                       
Query: 370 ccttcccgcattcgaagggcgtctcgttccatcacggctaggtcggctccaaccgcggag 429
           || || ||||| || || |  || | |||||| || | || ||| || ||||| || |  
Sbjct: 816 ccatcacgcatgcgtagtgaatccctttccatgaccgataagtcagccccaacagctgct 757

                                           
Query: 430 gcgaggtccgtcttgtttatgaccagaagatc 461
           || ||||| ||||||||||| |||||||||||
Sbjct: 756 gcaaggtcagtcttgtttatcaccagaagatc 725
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>dbj|AK119138.1| Arabidopsis thaliana At2g34470 mRNA for putative urease accessory
           protein, complete cds, clone: RAFL21-49-A17
          Length = 1051

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 120/152 (78%)
 Strand = Plus / Minus

                                                                       
Query: 310 tggtccacgatctcctccacgccaaccccgtgtttcacctgggcaaagacgaagggccct 369
           |||| |||||| ||||| || |||| ||| || |||||||| |||||||| || ||||||
Sbjct: 841 tggttcacgatttcctcgactccaagcccatgcttcacctgagcaaagacaaatggccct 782

                                                                       
Query: 370 ccttcccgcattcgaagggcgtctcgttccatcacggctaggtcggctccaaccgcggag 429
           || || ||||| || || |  || | |||||| || | || ||| || ||||| || |  
Sbjct: 781 ccatcacgcatgcgtagtgaatccctttccatgaccgataagtcagccccaacagctgct 722

                                           
Query: 430 gcgaggtccgtcttgtttatgaccagaagatc 461
           || ||||| ||||||||||| |||||||||||
Sbjct: 721 gcaaggtcagtcttgtttatcaccagaagatc 690
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>gb|AF109374.1|AF109374 Arabidopsis thaliana urease accessory protein UREG (UREG) mRNA,
           complete cds
          Length = 1050

 Score = 48.1 bits (24), Expect = 0.026
 Identities = 120/152 (78%)
 Strand = Plus / Minus

                                                                       
Query: 310 tggtccacgatctcctccacgccaaccccgtgtttcacctgggcaaagacgaagggccct 369
           |||| |||||| ||||| || |||| ||| || |||||||| |||||||| || ||||||
Sbjct: 819 tggttcacgatttcctcgactccaagcccatgcttcacctgagcaaagacaaatggccct 760

                                                                       
Query: 370 ccttcccgcattcgaagggcgtctcgttccatcacggctaggtcggctccaaccgcggag 429
           || || ||||| || || |  || | |||||| || | || ||| || ||||| || |  
Sbjct: 759 ccatcacgcatgcgtagtgaatccctttccatgaccgataagtcagccccaacagctgct 700

                                           
Query: 430 gcgaggtccgtcttgtttatgaccagaagatc 461
           || ||||| ||||||||||| |||||||||||
Sbjct: 699 gcaaggtcagtcttgtttatcaccagaagatc 668
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>gb|AC060809.7| Homo sapiens chromosome 15, clone RP11-404B13, complete sequence
          Length = 172123

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 115   tgctgcaaagcacacaccgtt 135
             |||||||||||||||||||||
Sbjct: 23105 tgctgcaaagcacacaccgtt 23085
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>gb|AC023034.9| Homo sapiens, clone RP11-499F3, complete sequence
          Length = 189732

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 115    tgctgcaaagcacacaccgtt 135
              |||||||||||||||||||||
Sbjct: 103411 tgctgcaaagcacacaccgtt 103391
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>gb|AC104121.3| Homo sapiens chromosome 5 clone RP11-408O10, complete sequence
          Length = 127716

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 439   gtcttgtttatgaccagaaga 459
             |||||||||||||||||||||
Sbjct: 52310 gtcttgtttatgaccagaaga 52290
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>emb|AJ272525.1|STU272525 Solanum tuberosum mRNA for urease accessory protein G (ureG gene)
           isoform D2
          Length = 841

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 322 tcctccacgccaaccccgtgtttcacctgggcaaagacgaagggccctccttcccgcatt 381
           ||||| ||||||||||| || |||||||| ||||| || || || || || |||||||| 
Sbjct: 779 tcctctacgccaaccccatgcttcacctgagcaaaaacaaaagggccaccatcccgcatc 720

                
Query: 382 cgaag 386
           |||||
Sbjct: 719 cgaag 715
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>emb|AJ272524.1|STU272524 Solanum tuberosum mRNA for urease accessory protein G (ureG gene)
           isoform R2
          Length = 970

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 54/65 (83%)
 Strand = Plus / Minus

                                                                       
Query: 322 tcctccacgccaaccccgtgtttcacctgggcaaagacgaagggccctccttcccgcatt 381
           ||||| ||||||||||| || |||||||| ||||| || || || || || |||||||| 
Sbjct: 785 tcctctacgccaaccccatgcttcacctgagcaaaaacaaaagggccaccatcccgcatc 726

                
Query: 382 cgaag 386
           |||||
Sbjct: 725 cgaag 721
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>emb|AL591032.19| Mouse DNA sequence from clone RP22-211A10 on chromosome 4, complete
             sequence
          Length = 205573

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 326   ccacgccaaccccgtgtttca 346
             |||||||||||||||||||||
Sbjct: 86929 ccacgccaaccccgtgtttca 86909
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>emb|AL606969.26| Mouse DNA sequence from clone RP23-331P21 on chromosome 4, complete
             sequence
          Length = 224344

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 326   ccacgccaaccccgtgtttca 346
             |||||||||||||||||||||
Sbjct: 19705 ccacgccaaccccgtgtttca 19685
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>ref|XM_363311.1| Magnaporthe grisea 70-15 hypothetical protein (MG01237.4) partial
           mRNA
          Length = 2373

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 257 ggagcctctatcggcgccgg 276
           ||||||||||||||||||||
Sbjct: 88  ggagcctctatcggcgccgg 107
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>dbj|AP001625.1| Homo sapiens genomic DNA, chromosome 21, clone:KB907F12, MX1-D21S171
             region, complete sequence
          Length = 130626

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   atctcctccacgccaacccc 338
             ||||||||||||||||||||
Sbjct: 38312 atctcctccacgccaacccc 38331
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>dbj|AP007166.1| Aspergillus oryzae RIB40 genomic DNA, SC113
          Length = 1841713

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 46      ttgcatctgatcaagttaca 65
               ||||||||||||||||||||
Sbjct: 1290362 ttgcatctgatcaagttaca 1290381
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>dbj|BS000228.1| Pan troglodytes chromosome 22 clone:RP43-139F08, map 22, complete
              sequences
          Length = 160535

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 319    atctcctccacgccaacccc 338
              ||||||||||||||||||||
Sbjct: 122350 atctcctccacgccaacccc 122369
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>emb|BX072532.7| Zebrafish DNA sequence from clone CH211-10B9 in linkage group 12,
              complete sequence
          Length = 160268

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 225    aacacatgaccgaaaattaa 244
              ||||||||||||||||||||
Sbjct: 123819 aacacatgaccgaaaattaa 123838
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>emb|CR759879.17| Zebrafish DNA sequence from clone DKEYP-117B8 in linkage group 5,
             complete sequence
          Length = 110254

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 126   acacaccgttatttttcagcatgc 149
             |||||||||||| |||||||||||
Sbjct: 14134 acacaccgttatatttcagcatgc 14111
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>dbj|AP001747.1| Homo sapiens genomic DNA, chromosome 21q, section 91/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   atctcctccacgccaacccc 338
             ||||||||||||||||||||
Sbjct: 14465 atctcctccacgccaacccc 14484
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>dbj|AP004606.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-138O22, complete
              sequences
          Length = 173185

 Score = 40.1 bits (20), Expect = 6.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 213    gtgggcgacatgaacacatgaccgaaaa 240
              ||||| ||||||||||||| ||||||||
Sbjct: 145775 gtgggagacatgaacacataaccgaaaa 145802


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,910,317
Number of Sequences: 3902068
Number of extensions: 2910317
Number of successful extensions: 42584
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 42516
Number of HSP's gapped (non-prelim): 62
length of query: 474
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 452
effective length of database: 17,147,199,772
effective search space: 7750534296944
effective search space used: 7750534296944
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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