>gb|AC117621.7| Mus musculus chromosome 8, clone RP23-114B10, complete sequence
          Length = 214933

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 144    tctttctcacattctctctccctca 168
              |||||||||||||||||||| ||||
Sbjct: 109367 tctttctcacattctctctctctca 109391

>gb|AC153970.4| Mus musculus 10 BAC RP24-116A15 (Roswell Park Cancer Institute
            (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 178124

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 147  ttctcacattctctctccctc 167
            |||||||||||||||||||||
Sbjct: 3756 ttctcacattctctctccctc 3736

>gb|AC136637.3| Mus musculus BAC clone RP24-327G11 from chromosome 18, complete sequence
          Length = 149724

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 147    ttctcacattctctctccctc 167
              |||||||||||||||||||||
Sbjct: 146047 ttctcacattctctctccctc 146067

>emb|AL596114.10| Human DNA sequence from clone RP11-274A8 on chromosome 13 Containd the 3'
              end of a novel gene (KIAA0774), a novel gene, the SLC7A1
              gene for solute carrier family 7 (cationic amino acid
              transporter, y+ system), member 1, and a CpG island,
              complete sequence
          Length = 173191

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 149    ctcacattctctctccctcactcac 173
              ||||||||||||| |||||||||||
Sbjct: 129018 ctcacattctctccccctcactcac 128994



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 149    ctcacattctctctccctcactcac 173
              ||||||||||||| |||||||||||
Sbjct: 128938 ctcacattctctccccctcactcac 128914



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 149    ctcacattctctctccctcactcac 173
              ||||||||||||| |||||||||||
Sbjct: 128918 ctcacattctctccccctcactcac 128894



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 149    ctcacattctctctccctcactcac 173
              ||||||||||||| |||||||||||
Sbjct: 128817 ctcacattctctccccctcactcac 128793



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 149    ctcacattctctctccctcactcac 173
              ||||||||||||| |||||||||||
Sbjct: 128797 ctcacattctctccccctcactcac 128773



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 149    ctcacattctctctccctcactcac 173
              ||||||||||||| |||||||||||
Sbjct: 128676 ctcacattctctccccctcactcac 128652



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 149    ctcacattctctctccctcactcac 173
              ||||||||||||| |||||||||||
Sbjct: 128656 ctcacattctctccccctcactcac 128632



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 149    ctcacattctctctccctcactcac 173
              ||||||||||||| |||||||||||
Sbjct: 128558 ctcacattctctccccctcactcac 128534



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 149    ctcacattctctctccctcactcac 173
              ||||||||||||| |||||||||||
Sbjct: 128538 ctcacattctctccccctcactcac 128514



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 149    ctcacattctctctccctcactcac 173
              ||||||||||||| |||||||||||
Sbjct: 128417 ctcacattctctccccctcactcac 128393



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 149    ctcacattctctctccctcactcac 173
              ||||||||||||| |||||||||||
Sbjct: 128397 ctcacattctctccccctcactcac 128373



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 149    ctcacattctctctccctcactcac 173
              ||||||||||||| |||||||||||
Sbjct: 128377 ctcacattctctccccctcactcac 128353



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 149    ctcacattctctctccctcactcac 173
              ||||||||||||| |||||||||||
Sbjct: 128058 ctcacattctctccccctcactcac 128034



 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 149    ctcacattctctctccctcactcac 173
              ||||||||||||| |||||||||||
Sbjct: 127815 ctcacattctctccccctcactcac 127791



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 150    tcacattctctctccctcactcac 173
              |||||||||||| |||||||||||
Sbjct: 128138 tcacattctctccccctcactcac 128115

>gb|AC162797.6| Mus musculus chromosome 8, clone RP23-293E17, complete sequence
          Length = 142444

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 144    tctttctcacattctctctccctca 168
              |||||||||||||||||||| ||||
Sbjct: 136509 tctttctcacattctctctctctca 136533

>emb|AL591410.8| Mouse DNA sequence from clone RP23-96I2 on chromosome 11 Contains part of
              the Myo1d gene for myosin ID, complete sequence
          Length = 231675

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 325    ccagccttttccagccccagg 345
              |||||||||||||||||||||
Sbjct: 222739 ccagccttttccagccccagg 222759

>emb|CR378051.1| Pinus pinaster SSR, clone PPB1H05
          Length = 455

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                        
Query: 138 actctgtctttctcacattctctctccct 166
           ||||| ||| |||||||||||||||||||
Sbjct: 183 actctatctctctcacattctctctccct 155

>gb|AC153912.8| Mus musculus 10 BAC RP23-331E5 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 206168

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 147   ttctcacattctctctccctc 167
             |||||||||||||||||||||
Sbjct: 62758 ttctcacattctctctccctc 62778

>gb|AC006453.3| Homo sapiens PAC clone RP4-614C10 from 2, complete sequence
          Length = 155313

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 144    tctttctcacattctctctcc 164
              |||||||||||||||||||||
Sbjct: 100548 tctttctcacattctctctcc 100528

>dbj|AK189105.1| Mus musculus cDNA, clone:Y0G0147N10, strand:minus,
           reference:ENSEMBL:Mouse-Transcript-
           ENST:ENSMUST00000043200, based on BLAT search
          Length = 423

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 54  caccacagtgaagtggaataa 74
           |||||||||||||||||||||
Sbjct: 298 caccacagtgaagtggaataa 278

>gb|AC109499.21| Mus musculus chromosome 18, clone RP23-349E12, complete sequence
          Length = 190594

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 147    ttctcacattctctctccctc 167
              |||||||||||||||||||||
Sbjct: 142862 ttctcacattctctctccctc 142842

>gb|AC166710.7| Mus musculus chromosome 1, clone RP24-252K15, complete sequence
          Length = 156244

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     catacacaccacagtgaagt 67
              ||||||||||||||||||||
Sbjct: 100659 catacacaccacagtgaagt 100678

>ref|XM_590872.2| PREDICTED: Bos taurus similar to Antigen KI-67 (LOC513220), mRNA
          Length = 9696

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 39   agcagtcagcatacacacca 58
            ||||||||||||||||||||
Sbjct: 2730 agcagtcagcatacacacca 2749

>emb|CR936838.15| Mouse DNA sequence from clone DN-127N6 on chromosome 3, complete
             sequence
          Length = 174972

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 139   ctctgtctttctcacattctctctccct 166
             |||| |||||||||| ||||||||||||
Sbjct: 24113 ctctctctttctcactttctctctccct 24140

>gb|AC121781.3| Mus musculus BAC clone RP23-363D24 from chromosome X, complete sequence
          Length = 174187

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 63    gaagtggaataaattctctactgt 86
             |||| |||||||||||||||||||
Sbjct: 24412 gaagaggaataaattctctactgt 24435

>gb|AC120544.9| Mus musculus chromosome 1, clone RP23-299N6, complete sequence
          Length = 223752

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 45    cagcatacacaccacagtga 64
             ||||||||||||||||||||
Sbjct: 43229 cagcatacacaccacagtga 43210

>emb|AL445664.14| Human DNA sequence from clone RP11-343J18 on chromosome 9 Contains part
             of a novel gene, the 3' end of a novel gene and a CpG
             island, complete sequence
          Length = 161002

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 157   ctctctccctcactcactaagtcc 180
             ||||||||||| ||||||||||||
Sbjct: 93441 ctctctccctccctcactaagtcc 93418

>ref|XM_789506.1| PREDICTED: Strongylocentrotus purpuratus similar to Neurogenic locus
            notch homolog protein 1 precursor (Notch 1) (hN1)
            (Translocation-associated notch protein TAN-1)
            (LOC589875), partial mRNA
          Length = 3073

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 41   cagtcagcatacacaccaca 60
            ||||||||||||||||||||
Sbjct: 1637 cagtcagcatacacaccaca 1618

>gb|AC162866.5| Mus musculus chromosome 1, clone RP23-90B23, complete sequence
          Length = 230597

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 45     cagcatacacaccacagtga 64
              ||||||||||||||||||||
Sbjct: 133720 cagcatacacaccacagtga 133701

>ref|XM_786310.1| PREDICTED: Strongylocentrotus purpuratus similar to Uromodulin
           precursor (Tamm-Horsfall urinary glycoprotein) (THP)
           (LOC586532), partial mRNA
          Length = 331

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 41  cagtcagcatacacaccaca 60
           ||||||||||||||||||||
Sbjct: 131 cagtcagcatacacaccaca 112

>gb|BT009420.1| Triticum aestivum clone wlmk1.pk0014.a12:fis, full insert mRNA
            sequence
          Length = 1794

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 101  agtaatatacaagcacaggt 120
            ||||||||||||||||||||
Sbjct: 1753 agtaatatacaagcacaggt 1734

>emb|AL020996.6|HS317E23 Human DNA sequence from clone RP1-317E23 on chromosome 1p36.13,
             complete sequence
          Length = 100301

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 227   aagctgaaagagaaaacaat 246
             ||||||||||||||||||||
Sbjct: 9981  aagctgaaagagaaaacaat 10000

>gb|AC123982.10| Pan troglodytes clone rp43-39b11, complete sequence
          Length = 186239

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 142    tgtctttctcacattctctc 161
              ||||||||||||||||||||
Sbjct: 159312 tgtctttctcacattctctc 159331

>gb|AC109456.3| Homo sapiens chromosome 5 clone RP11-242A24, complete sequence
          Length = 121848

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 153   cattctctctccctcactca 172
             ||||||||||||||||||||
Sbjct: 77765 cattctctctccctcactca 77746

>gb|AC091836.2| Homo sapiens chromosome 5 clone CTD-2060B6, complete sequence
          Length = 169695

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 155   ttctctctccctcactcact 174
             ||||||||||||||||||||
Sbjct: 32926 ttctctctccctcactcact 32907

>gb|AC008877.9| Homo sapiens chromosome 5 clone CTD-2204B21, complete sequence
          Length = 163575

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 155   ttctctctccctcactcact 174
             ||||||||||||||||||||
Sbjct: 10249 ttctctctccctcactcact 10268

>gb|AC169981.3| Mus musculus BAC clone RP24-346E16 from chromosome 6, complete sequence
          Length = 150872

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                  
Query: 139    ctctgtctttctcacattctctctccctcactcact 174
              |||| |||||||| | ||||||||||||| ||||||
Sbjct: 135614 ctctctctttctctctttctctctccctccctcact 135649

>gb|AC104394.4| Homo sapiens BAC clone RP13-977E11 from 2, complete sequence
          Length = 116924

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 144    tctttctcacattctctctc 163
              ||||||||||||||||||||
Sbjct: 103655 tctttctcacattctctctc 103674

>gb|AC018752.4|AC018752 Homo sapiens chromosome 5 clone CTC-339F2, complete sequence
          Length = 206691

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 153    cattctctctccctcactca 172
              ||||||||||||||||||||
Sbjct: 178868 cattctctctccctcactca 178887

>emb|BX855602.2| Human DNA sequence from clone XXyac-25BH1 on chromosome 1, complete
              sequence
          Length = 173910

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 227    aagctgaaagagaaaacaat 246
              ||||||||||||||||||||
Sbjct: 129623 aagctgaaagagaaaacaat 129604

>gb|AC141427.5| Mus musculus BAC clone RP23-100O21 from chromosome 6, complete sequence
          Length = 187833

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 139   ctctgtctttctcacattctctctccctcactcact 174
             |||| |||||||| | ||||||||||||| ||||||
Sbjct: 44730 ctctctctttctctctttctctctccctccctcact 44765

>emb|BX005240.7| Mouse DNA sequence from clone RP23-185M16 on chromosome X, complete
              sequence
          Length = 197310

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 63     gaagtggaataaattctctactgt 86
              |||| |||||||||||||||||||
Sbjct: 112011 gaagaggaataaattctctactgt 111988

>gb|AC005261.2| Homo sapiens chromosome 19, CIT-HSP-444n24, complete sequence
          Length = 190708

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 142   tgtctttctcacattctctc 161
             ||||||||||||||||||||
Sbjct: 79934 tgtctttctcacattctctc 79953

>gb|AC154247.2| Mus musculus BAC clone RP24-176G22 from chromosome 17, complete
             sequence
          Length = 162175

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 80    ctactgtgagtagtagtagt 99
             ||||||||||||||||||||
Sbjct: 49630 ctactgtgagtagtagtagt 49611

>emb|AL831718.6| Mouse DNA sequence from clone RP23-146O20 on chromosome X, complete
             sequence
          Length = 116076

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 141   ctgtctttctcacattctct 160
             ||||||||||||||||||||
Sbjct: 94611 ctgtctttctcacattctct 94592

>emb|AL671857.16| Mouse DNA sequence from clone RP23-176A21 on chromosome 3, complete
              sequence
          Length = 207354

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 139    ctctgtctttctcacattctctctccct 166
              |||| |||||||||| ||||||||||||
Sbjct: 117816 ctctctctttctcactttctctctccct 117843


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,313,499
Number of Sequences: 3902068
Number of extensions: 4313499
Number of successful extensions: 81310
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81199
Number of HSP's gapped (non-prelim): 111
length of query: 365
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 343
effective length of database: 17,147,199,772
effective search space: 5881489521796
effective search space used: 5881489521796
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)