>SDS22_SCHPO (P22194) Protein phosphatases PP1 regulatory subunit sds22|
          Length = 332

 Score = 38.5 bits (88), Expect = 0.010
 Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
 Frame = -1

Query: 485 LVVNDNQIPSLSGIESALSGSREKLTTIYLERNPCAKT--PNYSSTLKEIFPNLEQIDSD 312
           L  ++N++ S   IE  LSG + KL T+Y E NP  KT    Y + ++   P L QID+ 
Sbjct: 264 LWASNNELSSFQEIEDELSGLK-KLETVYFEGNPLQKTNPAVYRNKVRLCLPQLRQIDAT 322

Query: 311 ML 306
           ++
Sbjct: 323 II 324

>RU2A_YARLI (Q6C417) U2 small nuclear ribonucleoprotein A' (U2 snRNP-A')|
          Length = 230

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 21/56 (37%), Positives = 28/56 (50%)
 Frame = -1

Query: 485 LVVNDNQIPSLSGIESALSGSREKLTTIYLERNPCAKTPNYSSTLKEIFPNLEQID 318
           LV+  N I +L  +ES  S     LT I L+ NP    P Y S +  I P+L  +D
Sbjct: 119 LVLTQNGIATLGALESLKS--LVNLTAITLDGNPVQHVPRYRSYMISILPSLRMLD 172

>IDI1_PHOLL (Q7N1V4) Isopentenyl-diphosphate delta-isomerase 1 (EC 5.3.3.2)|
           (IPP isomerase 1) (Isopentenyl pyrophosphate isomerase
           1) (IPP:DMAPP isomerase 1)
          Length = 176

 Score = 32.3 bits (72), Expect = 0.73
 Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
 Frame = +2

Query: 239 CINTTDTSTNFNNLGSESNCFML-----AYLNQFAQDLGIFPSMWMNSW 370
           CIN  D   N ++L    +CF++      Y+ Q AQ   ++P  W NS+
Sbjct: 16  CINKIDAHLNGDHLHRAFSCFIINSKNEVYIQQRAQSKLLWPGYWSNSY 64

>RU2A_DROME (Q9V4Q8) Probable U2 small nuclear ribonucleoprotein A' (U2|
           snRNP-A')
          Length = 265

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 18/56 (32%), Positives = 28/56 (50%)
 Frame = -1

Query: 485 LVVNDNQIPSLSGIESALSGSREKLTTIYLERNPCAKTPNYSSTLKEIFPNLEQID 318
           +++  N +  LS +E  +  +  KL TI L  NP +  PNY   +   FP L  +D
Sbjct: 93  IILTGNNLQELSDLEPLVGFT--KLETICLLINPVSTKPNYREYMAYKFPQLRLLD 146

>CWLJ_OCEIH (P59104) Cell wall hydrolase cwlJ|
          Length = 141

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 14/40 (35%), Positives = 19/40 (47%)
 Frame = -3

Query: 243 IQEERSHPVQNRLYKLSVKQRCSLYWQSEWIIANFT*KAH 124
           IQ ER HP  N L+    +  C   W  +W +  +  KAH
Sbjct: 89  IQGERQHPASNSLWFFMPEGACPEQWYGQWNVGRY--KAH 126

>YNZ9_CAEEL (P45969) Hypothetical protein T09A5.9|
          Length = 326

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
 Frame = -1

Query: 476 NDNQIPSLSGIE--SALSGSREKLTTIYLERNP--CAKTPNYSSTLKEIFPNLEQIDS 315
           NDN++ S S IE  S L G    L T+YLERNP     T  Y   +      + QID+
Sbjct: 265 NDNKVESFSEIEQLSKLKG----LQTVYLERNPFYFNDTNQYRRKVMMTLTQVTQIDA 318

>ISPH_PROMM (Q7V4T7) 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC|
           1.17.1.2)
          Length = 398

 Score = 30.4 bits (67), Expect = 2.8
 Identities = 13/31 (41%), Positives = 18/31 (58%)
 Frame = -3

Query: 432 VWFTRETDHHIS*EKSLRKNSQLFIHIEGNI 340
           +W T E  H+ S  + LR+   LFIH EG +
Sbjct: 88  IWITNEIIHNPSVNEHLREMDVLFIHAEGGV 118

>YKG3_CAEEL (P46553) Hypothetical protein B0285.3|
          Length = 166

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = +2

Query: 341 IFPSMWMNSWEFLRKDFSQD 400
           I PSMW N W+ L K++ Q+
Sbjct: 123 IIPSMWNNPWDALEKEYEQE 142

>IMP4_DEBHA (Q6BYD9) U3 small nucleolar ribonucleoprotein protein IMP4 (U3|
           snoRNP protein IMP4)
          Length = 284

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 15/35 (42%), Positives = 18/35 (51%)
 Frame = -1

Query: 437 ALSGSREKLTTIYLERNPCAKTPNYSSTLKEIFPN 333
           ALSG  E    I   RNP  K   +S  +K +FPN
Sbjct: 72  ALSGISEPKVLITTSRNPSVKLLQFSKEIKLMFPN 106

>AGAL_SCHPO (Q9URZ0) Probable alpha-galactosidase precursor (EC 3.2.1.22)|
           (Melibiase) (Alpha-D-galactoside galactohydrolase)
          Length = 436

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 7/66 (10%)
 Frame = +2

Query: 293 NCFMLAYLNQFAQD-------LGIFPSMWMNSWEFLRKDFSQDIWWSVSLVNQTKQILSQ 451
           NCF L +L  F  D       LG+ P M  NSW     D  + I     ++N  K I  +
Sbjct: 8   NCFFLVFLFLFFSDVHGSYNGLGLKPQMGWNSWNKYACDIDESI-----ILNNAKAIKEE 62

Query: 452 TAMVFG 469
             +  G
Sbjct: 63  GLLDLG 68

>YLK6_CAEEL (P41954) Hypothetical protein D1044.6|
          Length = 1009

 Score = 29.3 bits (64), Expect = 6.2
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 5/43 (11%)
 Frame = +1

Query: 376 FAQGFLSRYMVVSFSREPDKA-----DSIPDSDGIWLSFTTSP 489
           F+  + SRY++ + ++E D A     D+  DSDG W  ++T P
Sbjct: 697 FSGKYASRYLLTT-TKEEDSATKKFEDAYADSDGDWADYSTKP 738

>MRAW_UREPA (Q9PQA4) S-adenosyl-methyltransferase mraW (EC 2.1.1.-)|
          Length = 308

 Score = 28.9 bits (63), Expect = 8.1
 Identities = 20/69 (28%), Positives = 30/69 (43%), Gaps = 10/69 (14%)
 Frame = +2

Query: 227 LLSSCINTTDTSTNFNNLGSESNCFMLAYLNQFAQDLGIFP----------SMWMNSWEF 376
           L  +  N     TNF NL S  +   + Y++ F  DLG+            S   N+W  
Sbjct: 66  LFKNNTNVIVIKTNFKNLKSALSAHKIFYVDGFIFDLGLSSPQLDDPKRGFSYHKNAWLD 125

Query: 377 LRKDFSQDI 403
           +R D SQ++
Sbjct: 126 MRMDQSQNL 134


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,761,704
Number of Sequences: 219361
Number of extensions: 1391604
Number of successful extensions: 3261
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 3187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3261
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3581144924
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)