>ref|XM_464782.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1637

 Score =  226 bits (114), Expect = 5e-56
 Identities = 181/202 (89%), Gaps = 1/202 (0%)
 Strand = Plus / Minus

                                                                        
Query: 297  gtttcatgctagcatatctgaatcaatttgctcaagatttgggaatatttccttcaatgt 356
            |||||||||||||||||||||||| | ||||||||||||||| ||||||  |||||| ||
Sbjct: 1073 gtttcatgctagcatatctgaatcgagttgctcaagatttggaaatattgtcttcaacgt 1014

                                                                        
Query: 357  ggatgaatagttgggagtttttgcgcaaggatttctctcaagatatatggtggtcagttt 416
            |||||||||||| |||| ||||||||||||||| | ||||||||||||||| ||||| ||
Sbjct: 1013 ggatgaatagtttggagcttttgcgcaaggattccgctcaagatatatggtagtcagctt 954

                                                                        
Query: 417  ctctcgtgaaccagacaaagcagattctatcccagacagcgatggtatttggttgtcatt 476
            ||| ||||||| || |||||||||||||||||||   || ||||||||||||||||||||
Sbjct: 953  ctcccgtgaactagccaaagcagattctatcccatctagtgatggtatttggttgtcatt 894

                                  
Query: 477  c-accacaagtcctctaacctg 497
            | ||||||||||||| ||||||
Sbjct: 893  caaccacaagtcctccaacctg 872

>dbj|AK101441.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033039E09, full
            insert sequence
          Length = 1635

 Score =  226 bits (114), Expect = 5e-56
 Identities = 181/202 (89%), Gaps = 1/202 (0%)
 Strand = Plus / Minus

                                                                        
Query: 297  gtttcatgctagcatatctgaatcaatttgctcaagatttgggaatatttccttcaatgt 356
            |||||||||||||||||||||||| | ||||||||||||||| ||||||  |||||| ||
Sbjct: 1071 gtttcatgctagcatatctgaatcgagttgctcaagatttggaaatattgtcttcaacgt 1012

                                                                        
Query: 357  ggatgaatagttgggagtttttgcgcaaggatttctctcaagatatatggtggtcagttt 416
            |||||||||||| |||| ||||||||||||||| | ||||||||||||||| ||||| ||
Sbjct: 1011 ggatgaatagtttggagcttttgcgcaaggattccgctcaagatatatggtagtcagctt 952

                                                                        
Query: 417  ctctcgtgaaccagacaaagcagattctatcccagacagcgatggtatttggttgtcatt 476
            ||| ||||||| || |||||||||||||||||||   || ||||||||||||||||||||
Sbjct: 951  ctcccgtgaactagccaaagcagattctatcccatctagtgatggtatttggttgtcatt 892

                                  
Query: 477  c-accacaagtcctctaacctg 497
            | ||||||||||||| ||||||
Sbjct: 891  caaccacaagtcctccaacctg 870

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score =  125 bits (63), Expect = 1e-25
 Identities = 106/119 (89%), Gaps = 1/119 (0%)
 Strand = Plus / Minus

                                                                           
Query: 380     cgcaaggatttctctcaagatatatggtggtcagtttctctcgtgaaccagacaaagcag 439
               |||||||||| | ||||||||||||||| ||||| ||||| ||||||| || ||||||||
Sbjct: 7317382 cgcaaggattccgctcaagatatatggtagtcagcttctcccgtgaactagccaaagcag 7317323

                                                                          
Query: 440     attctatcccagacagcgatggtatttggttgtcattc-accacaagtcctctaacctg 497
               |||||||||||   || ||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 7317322 attctatcccatctagtgatggtatttggttgtcattcaaccacaagtcctccaacctg 7317264



 Score =  103 bits (52), Expect = 5e-19
 Identities = 76/84 (90%)
 Strand = Plus / Minus

                                                                           
Query: 297     gtttcatgctagcatatctgaatcaatttgctcaagatttgggaatatttccttcaatgt 356
               |||||||||||||||||||||||| | ||||||||||||||| ||||||  |||||| ||
Sbjct: 7318023 gtttcatgctagcatatctgaatcgagttgctcaagatttggaaatattgtcttcaacgt 7317964

                                       
Query: 357     ggatgaatagttgggagtttttgc 380
               |||||||||||| |||| ||||||
Sbjct: 7317963 ggatgaatagtttggagcttttgc 7317940

>dbj|AP005756.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0035N08
          Length = 136267

 Score =  125 bits (63), Expect = 1e-25
 Identities = 106/119 (89%), Gaps = 1/119 (0%)
 Strand = Plus / Minus

                                                                         
Query: 380   cgcaaggatttctctcaagatatatggtggtcagtttctctcgtgaaccagacaaagcag 439
             |||||||||| | ||||||||||||||| ||||| ||||| ||||||| || ||||||||
Sbjct: 93190 cgcaaggattccgctcaagatatatggtagtcagcttctcccgtgaactagccaaagcag 93131

                                                                        
Query: 440   attctatcccagacagcgatggtatttggttgtcattc-accacaagtcctctaacctg 497
             |||||||||||   || ||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 93130 attctatcccatctagtgatggtatttggttgtcattcaaccacaagtcctccaacctg 93072



 Score =  103 bits (52), Expect = 5e-19
 Identities = 76/84 (90%)
 Strand = Plus / Minus

                                                                         
Query: 297   gtttcatgctagcatatctgaatcaatttgctcaagatttgggaatatttccttcaatgt 356
             |||||||||||||||||||||||| | ||||||||||||||| ||||||  |||||| ||
Sbjct: 93831 gtttcatgctagcatatctgaatcgagttgctcaagatttggaaatattgtcttcaacgt 93772

                                     
Query: 357   ggatgaatagttgggagtttttgc 380
             |||||||||||| |||| ||||||
Sbjct: 93771 ggatgaatagtttggagcttttgc 93748

>gb|AY105884.1| Zea mays PCO074613 mRNA sequence
          Length = 1240

 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 162/202 (80%), Gaps = 1/202 (0%)
 Strand = Plus / Minus

                                                                       
Query: 300 tcatgctagcatatctgaatcaatttgctcaagatttgggaatatttccttcaatgtgga 359
           ||||||||  ||||||||||||||||| || |||||||| ||||||| | |||| || ||
Sbjct: 964 tcatgctatgatatctgaatcaatttgttcgagatttggaaatattttcctcaacgtcga 905

                                                                       
Query: 360 tgaatagttgggagtttttgcgcaaggatttctctcaagatatatggtggtcagtttctc 419
            || || |  ||||||||||| || |||||||  || ||||| || || ||||  |||||
Sbjct: 904 cgagtaatctggagtttttgcacagggatttcgttcgagatagattgtcgtcaacttctc 845

                                                                       
Query: 420 tcgtgaaccagacaaagcagattctatcccagacagcgatggtatttggttgtcattc-a 478
            || ||||||| |||||| |  ||||| ||    || ||||||||||||||||||||| |
Sbjct: 844 ccgcgaaccagccaaagctgtctctataccctctagagatggtatttggttgtcattcaa 785

                                 
Query: 479 ccacaagtcctctaacctggtt 500
           ||||| |||||| | |||||||
Sbjct: 784 ccacaggtcctccagcctggtt 763

>gb|AC115123.4| Mus musculus BAC clone RP24-129O20 from 3, complete sequence
          Length = 181380

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 48     gagtcatggaccataggatgtattta 73
              ||||||||||||||| ||||||||||
Sbjct: 152105 gagtcatggaccataagatgtattta 152080

>gb|AC136712.9| Mus musculus chromosome 3, clone RP23-36H15, complete sequence
          Length = 201139

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 48    gagtcatggaccataggatgtattta 73
             ||||||||||||||| ||||||||||
Sbjct: 73690 gagtcatggaccataagatgtattta 73665

>gb|AC090883.1|AC090883 Homo sapiens chromosome 3 clone RP11-117G9 map 3p, complete sequence
          Length = 172400

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 200    ttatacaatctgttctgaact 220
              |||||||||||||||||||||
Sbjct: 170841 ttatacaatctgttctgaact 170861

>gb|AC027125.5| Homo sapiens chromosome 3 clone RP11-584M7 map 3p, complete sequence
          Length = 173842

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 200    ttatacaatctgttctgaact 220
              |||||||||||||||||||||
Sbjct: 112321 ttatacaatctgttctgaact 112341

>gb|AC154643.2| Mus musculus BAC clone RP23-277M12 from 13, complete sequence
          Length = 182420

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 213    tctgaactggatgacttcttt 233
              |||||||||||||||||||||
Sbjct: 145670 tctgaactggatgacttcttt 145690

>emb|CR382130.1| Yarrowia lipolytica chromosome D of strain CLIB122 of Yarrowia lipolytica
          Length = 3633272

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 125     tgggcctttcaagtaaagttg 145
               |||||||||||||||||||||
Sbjct: 2672567 tgggcctttcaagtaaagttg 2672587

>emb|AL732410.6| Mouse DNA sequence from clone RP23-91L2 on chromosome X, complete
              sequence
          Length = 220894

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 150    taatccattcagattgccagt 170
              |||||||||||||||||||||
Sbjct: 141700 taatccattcagattgccagt 141680

>emb|AL136998.36| Mouse DNA sequence from clone RP21-509E24 on chromosome X, complete
              sequence
          Length = 188218

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 150    taatccattcagattgccagt 170
              |||||||||||||||||||||
Sbjct: 177260 taatccattcagattgccagt 177240

>gb|AC136645.2| Rattus norvegicus 7 BAC CH230-156H17 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 204000

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 383   aaggatttctctcaagatatatgg 406
             ||||||||||||||||| ||||||
Sbjct: 49493 aaggatttctctcaagacatatgg 49470

>gb|AC110816.7| Mus musculus BAC clone RP23-20P15 from chromosome 12, complete sequence
          Length = 216095

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 325   tgctcaagatttgggaatatttcc 348
             |||||||||| |||||||||||||
Sbjct: 87603 tgctcaagatctgggaatatttcc 87626

>gb|CP000082.1| Psychrobacter arcticus 273-4, complete genome
          Length = 2650701

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 138     taaagttggcaataatccat 157
               ||||||||||||||||||||
Sbjct: 1635456 taaagttggcaataatccat 1635437

>gb|AC110564.7| Mus musculus chromosome 12, clone RP23-292A16, complete sequence
          Length = 211576

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 431    acaaagcagattctatccca 450
              ||||||||||||||||||||
Sbjct: 133111 acaaagcagattctatccca 133130

>emb|BX005314.35| Zebrafish DNA sequence from clone CH211-155D24 in linkage group 6,
              complete sequence
          Length = 164188

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 94     agatctcagcaggaaatgac 113
              ||||||||||||||||||||
Sbjct: 155764 agatctcagcaggaaatgac 155745

>gb|CP000323.1| Psychrobacter cryohalolentis K5, complete genome
          Length = 3059876

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 138     taaagttggcaataatccat 157
               ||||||||||||||||||||
Sbjct: 1206282 taaagttggcaataatccat 1206301

>emb|AL592049.3| Human DNA sequence from clone RP11-747I9 on chromosome Xq11.1-12
             Contains a novel pseudogene, complete sequence
          Length = 104353

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     aaagggaaaacaaatacatc 20
             ||||||||||||||||||||
Sbjct: 82994 aaagggaaaacaaatacatc 82975

>emb|AL445310.9| Human DNA sequence from clone RP11-61P11 on chromosome 9, complete
              sequence
          Length = 175993

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 223    atgacttctttcctcctgtataaa 246
              |||||||||||| |||||||||||
Sbjct: 135352 atgacttctttcttcctgtataaa 135329

>emb|AL445647.6| Human DNA sequence from clone RP11-471M2 on chromosome 13 Contains a
              novel pseudogene (KIAA1676) and a novel gene, complete
              sequence
          Length = 165663

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 6      gaaaacaaatacatcatctc 25
              ||||||||||||||||||||
Sbjct: 110380 gaaaacaaatacatcatctc 110399

>ref|XM_966190.1| PREDICTED: Tribolium castaneum similar to CG10254-PA, isoform A
           (LOC659924), mRNA
          Length = 3126

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 254 gatacttctactaacttcaacaat 277
           ||||||||| ||||||||||||||
Sbjct: 492 gatacttctcctaacttcaacaat 469

>gb|DQ123938.1| Coffea arabica x Coffea canephora clone HT-SSH3-D08 mRNA sequence
          Length = 192

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 85  agtttttatagatctcagca 104
           ||||||||||||||||||||
Sbjct: 131 agtttttatagatctcagca 112

>gb|DQ123936.1| Coffea arabica x Coffea canephora clone HT-SSH2-B04 mRNA sequence
          Length = 192

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 85  agtttttatagatctcagca 104
           ||||||||||||||||||||
Sbjct: 131 agtttttatagatctcagca 112

>emb|AL645569.21| Mouse DNA sequence from clone RP23-96I9 on chromosome 11 Contains the
             5' end of the gene for a novel protein similar to rat
             rabphilin-3a related protein, two novel genes and two CpG
             islands, complete sequence
          Length = 131144

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 480   cacaagtcctctaacctggt 499
             ||||||||||||||||||||
Sbjct: 34034 cacaagtcctctaacctggt 34053

>emb|BX323544.4| Zebrafish DNA sequence from clone DKEY-175I15 in linkage group 7,
             complete sequence
          Length = 182033

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 242   ataaacacaacagatacttc 261
             ||||||||||||||||||||
Sbjct: 11563 ataaacacaacagatacttc 11582

>ref|XM_686059.1| PREDICTED: Danio rerio similar to kalirin, RhoGEF kinase
           (LOC562685), mRNA
          Length = 5187

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 94  agatctcagcaggaaatgac 113
           ||||||||||||||||||||
Sbjct: 466 agatctcagcaggaaatgac 447

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
               sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 318     atcaatttgctcaagatttg 337
               ||||||||||||||||||||
Sbjct: 5895720 atcaatttgctcaagatttg 5895739

>emb|BX119909.5| Zebrafish DNA sequence from clone CH211-223I3 in linkage group 6,
              complete sequence
          Length = 221755

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 94     agatctcagcaggaaatgac 113
              ||||||||||||||||||||
Sbjct: 145460 agatctcagcaggaaatgac 145479

>gb|AC151896.3| Mus musculus BAC clone RP24-501F15 from 18, complete sequence
          Length = 189528

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 346   tccttcaatgtggatgaata 365
             ||||||||||||||||||||
Sbjct: 79343 tccttcaatgtggatgaata 79362

>gb|AC006239.5|AC006239 Homo sapiens chromosome 9, clone hRPK.467_F_21, complete sequence
          Length = 195032

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 223    atgacttctttcctcctgtataaa 246
              |||||||||||| |||||||||||
Sbjct: 101081 atgacttctttcttcctgtataaa 101104

>emb|AL663018.4|OSJN00219 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0045O17,
             complete sequence
          Length = 137981

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 318   atcaatttgctcaagatttg 337
             ||||||||||||||||||||
Sbjct: 38957 atcaatttgctcaagatttg 38976


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,767,277
Number of Sequences: 3902068
Number of extensions: 4767277
Number of successful extensions: 93148
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92968
Number of HSP's gapped (non-prelim): 175
length of query: 500
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 478
effective length of database: 17,147,199,772
effective search space: 8196361491016
effective search space used: 8196361491016
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)