Clone Name
rbart42d06
Clone Library Name
barley_pub
No.
Definition
Score (bits)
E Value
1 emb|X80266.1|HVGTIPP H.vulgare mRNA for gamma-TIP-like protein
757
0.0
2 gb|U86762.1|TAU86762 Triticum aestivum gamma-type tonoplast intr...
349
5e-93
3 gb|AY243803.1| Zea mays tonoplast water channel (TIP1-1) mRNA, c...
315
6e-83
4 gb|AY104464.1| Zea mays PCO114899 mRNA sequence
315
6e-83
5 gb|BT016300.1| Zea mays clone Contig133 mRNA sequence
307
2e-80
6 gb|AF037061.1|AF037061 Zea mays tonoplast intrinsic protein (ZmT...
307
2e-80
7 gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
254
2e-64
8 gb|AC090485.3|AC090485 Genomic Sequence for Oryza sativa, Nippon...
254
2e-64
9 dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...
254
2e-64
10 dbj|D25534.1|RICYK333 Oryza sativa yk333 mRNA for gamma-Tip, com...
254
2e-64
11 dbj|AK104123.1| Oryza sativa (japonica cultivar-group) cDNA clon...
254
2e-64
12 dbj|AK068986.1| Oryza sativa (japonica cultivar-group) cDNA clon...
254
2e-64
13 dbj|AK059438.1| Oryza sativa (japonica cultivar-group) cDNA clon...
254
2e-64
14 dbj|AK058322.1| Oryza sativa (japonica cultivar-group) cDNA clon...
254
2e-64
15 ref|XM_470213.1| Oryza sativa (japonica cultivar-group), predic...
236
5e-59
16 dbj|AK060994.1| Oryza sativa (japonica cultivar-group) cDNA clon...
155
1e-34
17 emb|AJ242805.1|SST242805 Sporobolus stapfianus mRNA for putative...
115
1e-22
18 dbj|AK110727.1| Oryza sativa (japonica cultivar-group) cDNA clon...
107
3e-20
19 dbj|AB206104.1| Mimosa pudica tip1;1 mRNA for tonoplast intrinsi...
90
7e-15
20 gb|AF326500.1|AF326500 Zea mays tonoplast membrane integral prot...
86
1e-13
21 ref|NM_189497.1| Oryza sativa (japonica cultivar-group), predic...
78
3e-11
22 dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D...
78
3e-11
23 dbj|AP003627.3| Oryza sativa (japonica cultivar-group) genomic D...
78
3e-11
24 dbj|AK111768.1| Oryza sativa (japonica cultivar-group) cDNA clon...
78
3e-11
25 dbj|AK111747.1| Oryza sativa (japonica cultivar-group) cDNA clon...
78
3e-11
26 dbj|AB114829.1| Oryza sativa (japonica cultivar-group) OsTIP1 mR...
78
3e-11
27 emb|AJ005078.2|PAAJ5078 Picea abies mRNA for aquaporin-like protein
72
2e-09
28 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...
72
2e-09
29 dbj|AP005449.3| Oryza sativa (japonica cultivar-group) genomic D...
72
2e-09
30 dbj|AP004784.3| Oryza sativa (japonica cultivar-group) genomic D...
72
2e-09
31 dbj|AK104464.1| Oryza sativa (japonica cultivar-group) cDNA clon...
72
2e-09
32 dbj|AK104377.1| Oryza sativa (japonica cultivar-group) cDNA clon...
72
2e-09
33 dbj|AK104270.1| Oryza sativa (japonica cultivar-group) cDNA clon...
72
2e-09
34 dbj|AK100193.1| Oryza sativa (japonica cultivar-group) cDNA clon...
72
2e-09
35 dbj|AK099616.1| Oryza sativa (japonica cultivar-group) cDNA clon...
72
2e-09
36 dbj|AK099141.1| Oryza sativa (japonica cultivar-group) cDNA clon...
72
2e-09
37 dbj|AK099015.1| Oryza sativa (japonica cultivar-group) cDNA clon...
72
2e-09
38 dbj|AK073531.1| Oryza sativa (japonica cultivar-group) cDNA clon...
72
2e-09
39 gb|AY112388.1| Zea mays CL24208_1 mRNA sequence
72
2e-09
40 gb|AY525639.1| Triticum aestivum delta tonoplast intrinsic prote...
68
2e-08
41 ref|XM_467137.1| Oryza sativa (japonica cultivar-group), mRNA
64
4e-07
42 gb|AY525641.1| Triticum aestivum delta tonoplast intrinsic prote...
64
4e-07
43 gb|AY525640.1| Triticum aestivum delta tonoplast intrinsic prote...
64
4e-07
44 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
64
4e-07
45 gb|AF326508.1|AF326508 Zea mays tonoplast membrane integral prot...
64
4e-07
46 dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic D...
64
4e-07
47 dbj|AP005289.2| Oryza sativa (japonica cultivar-group) genomic D...
64
4e-07
48 dbj|AB114830.1| Oryza sativa (japonica cultivar-group) OsTIP2 mR...
64
4e-07
49 dbj|AK064728.1| Oryza sativa (japonica cultivar-group) cDNA clon...
64
4e-07
50 gb|AY821911.1| Gossypium hirsutum putative tonoplast intrinsic p...
64
4e-07
51 gb|U86763.1|TAU86763 Triticum aestivum delta-type tonoplast intr...
64
4e-07
52 emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chro...
64
4e-07
53 ref|NM_197137.1| Oryza sativa (japonica cultivar-group) putative...
62
2e-06
54 ref|NM_189871.1| Oryza sativa (japonica cultivar-group), mRNA
62
2e-06
55 gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 geno...
62
2e-06
56 dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D...
62
2e-06
57 dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...
62
2e-06
58 gb|AF326502.1|AF326502 Zea mays tonoplast membrane integral prot...
62
2e-06
59 gb|AF326501.1|AF326501 Zea mays tonoplast membrane integral prot...
62
2e-06
60 dbj|AP004380.2| Oryza sativa (japonica cultivar-group) genomic D...
62
2e-06
61 dbj|AK111931.1| Oryza sativa (japonica cultivar-group) cDNA clon...
62
2e-06
62 dbj|AB114828.1| Oryza sativa (japonica cultivar-group) OsTIP3 mR...
62
2e-06
63 dbj|AK106383.1| Oryza sativa (japonica cultivar-group) cDNA clon...
62
2e-06
64 gb|AY105015.1| Zea mays PCO137646 mRNA sequence
62
2e-06
65 gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome...
62
2e-06
66 gb|AY243804.1| Zea mays tonoplast water channel mRNA, complete cds
60
6e-06
67 gb|AF326503.1|AF326503 Zea mays tonoplast membrane integral prot...
60
6e-06
68 gb|AY106931.1| Zea mays PCO140073 mRNA sequence
60
6e-06
69 gb|AF057183.1|AF057183 Zea mays putative tonoplast aquaporin mRN...
60
6e-06
70 gb|U43291.1|MCU43291 Mesembryanthemum crystallinum tonoplast int...
60
6e-06
71 ref|NM_188505.1| Oryza sativa (japonica cultivar-group), Ozsa817...
58
2e-05
72 gb|AF521135.1| Kandelia candel tonoplast intrinsic protein (TIP)...
58
2e-05
73 dbj|AP002094.1| Oryza sativa (japonica cultivar-group) genomic D...
58
2e-05
74 gb|AF254799.1|AF254799 Hordeum vulgare tonoplast intrinsic prote...
56
9e-05
75 ref|NM_188624.1| Oryza sativa (japonica cultivar-group), Ozsa822...
54
4e-04
76 gb|BT016509.1| Zea mays clone Contig342 mRNA sequence
54
4e-04
77 gb|DQ226889.1| Boechera divaricarpa isolate SLW-D-E07 mRNA sequence
54
4e-04
78 emb|X72581.1|ATGTIPMR A.thaliana mRNA for tonoplast intrinsic pr...
54
4e-04
79 emb|AJ289866.2|VVI289866 Vitis vinifera mRNA for putative aquapo...
54
4e-04
80 gb|AF271661.1|AF271661 Vitis berlandieri x Vitis rupestris putat...
54
4e-04
81 dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic D...
54
4e-04
82 dbj|AK069192.1| Oryza sativa (japonica cultivar-group) cDNA clon...
54
4e-04
83 gb|AF367456.1| Prunus persica clone gTip1 gamma-tonoplast intrin...
50
0.006
84 ref|XM_473424.1| Oryza sativa (japonica cultivar-group), predic...
48
0.023
85 emb|X95650.1|TGTIP1GEN T.gesneriana mRNA for tonoplast intrinsic...
48
0.023
86 emb|AL663000.4|OSJN00201 Oryza sativa genomic DNA, chromosome 4,...
48
0.023
87 gb|U92651.2|BOU92651 Brassica oleracea var. botrytis tonoplast i...
48
0.023
88 dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D...
48
0.023
89 gb|AF326509.1|AF326509 Zea mays tonoplast membrane integral prot...
48
0.023
90 emb|X53040.1|RNNIP26 R.norvegicus MIP-26 mRNA
46
0.091
91 emb|X53052.1|RRMIP Rat partial mRNA for main intrinsic protein
46
0.091
92 emb|X12514.1|RNMIP26R Rat mRNA fragment for main intrinsic prote...
46
0.091
93 gb|AY130971.1| Brassica oleracea var. botrytis tonoplast intrins...
46
0.091
94 emb|AJ251652.1|MTR251652 Medicago truncatula mRNA for aquaporin ...
46
0.091
95 gb|U92652.2|BOU92652 Brassica oleracea var. botrytis tonoplast i...
46
0.091
96 gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
46
0.091
97 gb|AF326505.1|AF326505 Zea mays tonoplast membrane integral prot...
46
0.091
98 gb|AC020922.9| Homo sapiens chromosome 19 clone CTD-2105E13, com...
46
0.091
99 ref|XM_343137.2| PREDICTED: Rattus norvegicus major intrinsic pr...
46
0.091
100 gb|AY207429.1| Homo sapiens interleukin 11 (IL11) gene, complete...
46
0.091
101 emb|AJ605573.1| Ricinus communis mRNA for aquaporin (Tip1-1 gene...
46
0.091
102 gb|AY112625.1| Zea mays CL46210_1 mRNA sequence
46
0.091
103 gb|AF000143.1|HSAF000143 Human putative alternative lens membran...
46
0.091
104 gb|M81890.1|HUMIL11A Human interleukin 11 (IL11) gene, complete ...
46
0.091
105 emb|AL591787.1|SME591787 Sinorhizobium meliloti 1021 complete ch...
44
0.36
106 ref|XM_851400.1| PREDICTED: Canis familiaris similar to actinin,...
44
0.36
107 ref|XM_536333.2| PREDICTED: Canis familiaris similar to actinin,...
44
0.36
108 ref|XM_851314.1| PREDICTED: Canis familiaris similar to actinin,...
44
0.36
109 ref|XM_851274.1| PREDICTED: Canis familiaris similar to actinin,...
44
0.36
110 ref|XM_851189.1| PREDICTED: Canis familiaris similar to actinin,...
44
0.36
111 ref|XM_851152.1| PREDICTED: Canis familiaris similar to actinin,...
44
0.36
112 ref|XM_851023.1| PREDICTED: Canis familiaris similar to actinin,...
44
0.36
113 dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D...
44
0.36
114 gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome...
44
0.36
115 emb|AL928775.2|CNS08CC5 Oryza sativa chromosome 12, . BAC OSJNBa...
44
0.36
116 gb|AE017351.1| Cryptococcus neoformans var. neoformans JEC21 chr...
42
1.4
117 gb|AC154709.2| Mus musculus BAC clone RP24-357I4 from chromosome...
42
1.4
118 ref|XM_593064.2| PREDICTED: Bos taurus similar to tumor protein ...
42
1.4
119 gb|AF183913.1| Azospirillum brasilense major outer membrane prot...
42
1.4
120 ref|XM_856403.1| PREDICTED: Canis familiaris similar to aquapori...
42
1.4
121 ref|XM_845359.1| PREDICTED: Canis familiaris similar to aquapori...
42
1.4
122 emb|CT025679.5| Mouse DNA sequence from clone RP24-296K22 on chr...
42
1.4
123 ref|XM_567655.1| Cryptococcus neoformans var. neoformans JEC21 h...
42
1.4
124 gb|AC123532.4| Mus musculus chromosome 14 clone RP23-84B6, compl...
42
1.4
125 gb|AC098877.3| Mus musculus BAC clone RP23-2C24 from 14, complet...
42
1.4
126 gb|AC104099.5| Mus musculus BAC clone RP24-372J8 from 3, complet...
42
1.4
127 gb|BC012214.1| Mus musculus Rab geranylgeranyl transferase, a su...
42
1.4
128 gb|AY258323.1| Rubella virus strain BRD-II, complete genome
42
1.4
129 ref|NM_019519.1| Mus musculus Rab geranylgeranyl transferase, a ...
42
1.4
130 ref|XM_961391.1| PREDICTED: Tribolium castaneum similar to CG310...
42
1.4
131 gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
42
1.4
132 emb|AL390091.1|NCB12F1 Neurospora crassa DNA linkage group II BA...
42
1.4
133 emb|AJ489613.1|CAR489613 Cicer arietinum partial mRNA for tonopl...
42
1.4
134 emb|BX470185.18| Zebrafish DNA sequence from clone CH211-222D3 i...
42
1.4
135 dbj|AK146917.1| Mus musculus 17 days embryo kidney cDNA, RIKEN f...
42
1.4
136 gb|AC135495.2| Oryza sativa (japonica cultivar-group) chromosome...
42
1.4
137 ref|NM_214226.1| Sus scrofa inositol(1,3,4,5)tetrakisphosphate r...
42
1.4
138 gb|AE004658.1| Pseudomonas aeruginosa PAO1, section 219 of 529 o...
42
1.4
139 gb|AF275315.1|AF275315 Lotus japonicus water-selective transport...
42
1.4
140 gb|AF127662.1|AF127662 Mus musculus strain C57BL/6J-gm/gm RAB ge...
42
1.4
141 gb|AF127661.1|AF127661 Mus musculus strain C57BL/6J-gm/gm RAB ge...
42
1.4
142 gb|AF127660.1|AF127660 Mus musculus strain C57BL/6J RAB geranylg...
42
1.4
143 gb|AF127659.1|AF127659 Mus musculus strain C57BL/6J-gm/gm RAB ge...
42
1.4
144 gb|AF127658.1|AF127658 Mus musculus strain C57BL/6J RAB geranylg...
42
1.4
145 gb|AF127657.1|AF127657 Mus musculus strain C57BL/6J-gm/gm RAB ge...
42
1.4
146 gb|AF127656.1|AF127656 Mus musculus strain C57BL/6J RAB geranylg...
42
1.4
147 gb|AF127655.1|AF127655 Mus musculus strain C57BL/6J-gm/gm RAB ge...
42
1.4
148 gb|AF127654.1|AF127654 Mus musculus strain C57BL/6J RAB geranylg...
42
1.4
149 gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, c...
42
1.4
150 emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple...
42
1.4
151 emb|AL845372.6| Zebrafish DNA sequence from clone DKEYP-113C1 in...
42
1.4
152 emb|CR381567.9| Zebrafish DNA sequence from clone DKEY-115O4 in ...
42
1.4
153 gb|AF026470.1|AF026470 Pseudomonas aeruginosa gluconate represso...
42
1.4
154 gb|AC159324.2| Mus musculus BAC clone RP23-9D1 from chromosome 1...
42
1.4
155 gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co...
42
1.4
156 emb|CR974568.14| Mouse DNA sequence from clone RP23-39N20 on chr...
42
1.4
157 emb|CR388420.19| Zebrafish DNA sequence from clone DKEY-37H18 in...
42
1.4
158 gb|U88368.1|SSU88368 Sus scrofa inositol(1,3,4,5)tetrakisphospha...
42
1.4
159 dbj|AP004479.1| Lotus japonicus genomic DNA, chromosome 1, clone...
42
1.4
160 gb|L07320.1|HS5E1A Murine cytomegalovirus e1 protein gene, compl...
42
1.4
161 dbj|AB048248.1| Pyrus communis Py-gTIP mRNA for gamma tonoplast ...
42
1.4
162 ref|NM_129238.2| Arabidopsis thaliana GAMMA-TIP; water channel A...
40
5.6
163 gb|AC164878.2| Mus musculus BAC clone RP23-364G24 from chromosom...
40
5.6
164 gb|AC162034.6| Mus musculus chromosome 7, clone RP23-285B12, com...
40
5.6
165 gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
40
5.6
166 gb|DQ215783.1| Taeniopygia guttata clone 0058P0012B09 proteasome...
40
5.6
167 gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
40
5.6
168 ref|XM_472326.1| Oryza sativa (japonica cultivar-group), predic...
40
5.6
169 gb|AF474373.1| Hordeum vulgare subsp. vulgare BAC 259I16, comple...
40
5.6
170 ref|NM_001025266.1| Homo sapiens hypothetical gene supported by ...
40
5.6
171 gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl...
40
5.6
172 gb|AC145321.3| Oryza sativa (japonica cultivar-group) chromosome...
40
5.6
173 gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, comp...
40
5.6
174 ref|XM_414866.1| PREDICTED: Gallus gallus similar to Aquaporin 8...
40
5.6
175 ref|XM_426181.1| PREDICTED: Gallus gallus similar to Brix domain...
40
5.6
176 gb|AY581827.1| Cynodon dactylon NOD26-like membrane integral pro...
40
5.6
177 gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge...
40
5.6
178 gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com...
40
5.6
179 gb|DQ356948.1| Crocodilepox virus, complete genome
40
5.6
180 gb|AY502065.1| Streptomyces mobaraensis transglutaminase gene, c...
40
5.6
181 gb|AF531437.1| Streptomyces mobaraensis IFO13819 transglutaminas...
40
5.6
182 emb|CR847515.10| Zebrafish DNA sequence from clone DKEYP-60A7 in...
40
5.6
183 gb|AC012596.4| Homo sapiens BAC clone CTD-2523K17 from 7, comple...
40
5.6
184 gb|AY225468.1| Mus musculus interleukin 11 gene, promoter region...
40
5.6
185 emb|AL161740.16| Human DNA sequence from clone RP6-239D12 on chr...
40
5.6
186 gb|AC123518.2| Oryza sativa (japonica cultivar-group) chromosome...
40
5.6
187 emb|X63552.1|ATGTIPARA A.thaliana gene for tonoplast intrinsic p...
40
5.6
188 gb|AY059134.1| Arabidopsis thaliana putative aquaporin (At2g3683...
40
5.6
189 gb|AF370172.1| Arabidopsis thaliana putative tonoplast intrinsic...
40
5.6
190 gb|AF486513.1| Hordeum vulgare cultivar Yon M Kei GBSSI gene, pr...
40
5.6
191 gb|AF486512.1| Hordeum vulgare cultivar CDC Alamo GBSSI gene, pr...
40
5.6
192 gb|AF486508.1| Hordeum vulgare cultivar Oderbrucker GBSSI gene, ...
40
5.6
193 emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos...
40
5.6
194 emb|AJ314583.1|POC314583 Posidonia oceanica mRNA for putative to...
40
5.6
195 emb|BX897736.7| Zebrafish DNA sequence from clone CH211-181B15 i...
40
5.6
196 gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
40
5.6
197 gb|AC023310.4| Homo sapiens chromosome 15, clone RP11-336L20, co...
40
5.6
198 dbj|AK091454.1| Homo sapiens cDNA FLJ34135 fis, clone FCBBF3010695
40
5.6
199 tpg|BK001890.1| TPA: TPA_inf: Drosophila melanogaster HDC08154 (...
40
5.6
200 gb|CP000133.1| Rhizobium etli CFN 42, complete genome
40
5.6
201 gb|CP000136.1| Rhizobium etli CFN 42 plasmid p42c, complete sequ...
40
5.6
202 dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ...
40
5.6
203 gb|AC006922.7| Arabidopsis thaliana chromosome 2 clone T1J8 map ...
40
5.6
204 dbj|AB118808.1| Hordeum vulgare subsp. spontaneum GBSSI gene for...
40
5.6
205 dbj|AB089162.1| Hordeum vulgare subsp. vulgare GBSSI gene for gr...
40
5.6
206 dbj|AB088761.1| Hordeum vulgare subsp. vulgare GBSSI gene for gr...
40
5.6
207 gb|AC100757.2| Homo sapiens chromosome 15, clone RP11-566K19, co...
40
5.6
208 gb|AC107487.1| Drosophila melanogaster 3L BAC RP98-10D20 (Roswel...
40
5.6
209 gb|DQ317109.1| Drosophila pseudoobscura Dscam gene, exons 3 thro...
40
5.6
210 emb|BX548249.13| Zebrafish DNA sequence from clone CH211-93A2 in...
40
5.6
211 emb|BX119977.10| Zebrafish DNA sequence from clone CH211-198A3 i...
40
5.6
212 dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...
40
5.6
213 dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...
40
5.6
214 gb|AF342810.1|AF342810 Zea mays NOD26-like membrane integral pro...
40
5.6
215 gb|AF326485.1|AF326485 Zea mays NOD26-like membrane integral pro...
40
5.6
216 emb|AL662997.3|OSJN00205 Oryza sativa genomic DNA, chromosome 4,...
40
5.6
217 emb|BX819301.1|CNS0AA93 Arabidopsis thaliana Full-length cDNA Co...
40
5.6
218 emb|BX819122.1|CNS0AA8S Arabidopsis thaliana Full-length cDNA Co...
40
5.6
219 emb|BX819066.1|CNS0AA99 Arabidopsis thaliana Full-length cDNA Co...
40
5.6
220 emb|BX818765.1|CNS0AA8G Arabidopsis thaliana Full-length cDNA Co...
40
5.6
221 emb|BX819619.1|CNS0A8TV Arabidopsis thaliana Full-length cDNA Co...
40
5.6
222 emb|BX819585.1|CNS0A8ZS Arabidopsis thaliana Full-length cDNA Co...
40
5.6
223 emb|BX819242.1|CNS0A8YI Arabidopsis thaliana Full-length cDNA Co...
40
5.6
224 emb|BX818836.1|CNS0A8V6 Arabidopsis thaliana Full-length cDNA Co...
40
5.6
225 emb|BX818785.1|CNS0A8WQ Arabidopsis thaliana Full-length cDNA Co...
40
5.6
226 emb|BX820166.1|CNS0A8IR Arabidopsis thaliana Full-length cDNA Co...
40
5.6
227 gb|AF022186.2|AF022186 Cyanidium caldarium strain RK1 chloroplas...
40
5.6
228 gb|AY087558.1| Arabidopsis thaliana clone 36633 mRNA, complete s...
40
5.6
229 gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
40
5.6
230 gb|AC136687.6| Homo sapiens chromosome 15, clone RP11-439M15, co...
40
5.6
231 gb|AC134393.6| Homo sapiens chromosome 15, clone CTC-803A3, comp...
40
5.6
232 gb|AC131280.9| Homo sapiens chromosome 15, clone RP11-467L19, co...
40
5.6
233 dbj|AP006149.2| Oryza sativa (japonica cultivar-group) genomic D...
40
5.6
234 dbj|AB154356.1| Hordeum vulgare subsp. spontaneum GBSSI gene for...
40
5.6
235 dbj|AB118809.1| Hordeum vulgare subsp. spontaneum GBSSI gene for...
40
5.6
236 dbj|AK112006.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
5.6
237 dbj|AK111927.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
5.6
238 emb|X07932.1|HVWAXYR Barley mRNA pcwx27 for waxy locus
40
5.6
239 emb|X07931.1|HVWAXYG Barley DNA for waxy locus encoding starch s...
40
5.6
240 gb|AC007934.7|AC007934 Homo sapiens, clone RP11-29A1, complete s...
40
5.6
241 dbj|AK100873.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
5.6
242 dbj|AK069688.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
5.6
243 emb|AL929340.4| Zebrafish DNA sequence from clone CH211-248N16 i...
40
5.6
244 gb|AY109651.1| Zea mays CL6730_1 mRNA sequence
40
5.6
245 gb|AC006947.2|AC006947 Homo sapiens chromosome 17, clone hRPK.11...
40
5.6
246 gb|AE003476.3| Drosophila melanogaster chromosome 3L, section 10...
40
5.6
247 gb|AC116680.21| Mus musculus chromosome 12, clone RP23-476M16, c...
40
5.6
248 gb|U68299.1|MCU68299 Mouse cytomegalovirus 1 complete genomic se...
40
5.6
249 emb|CR388150.14| Zebrafish DNA sequence from clone DKEY-115A2 in...
40
5.6
250 gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...
40
5.6
251 gb|AF317103.1| Dumontia alaskana specimen-voucher GWS000917 (UNB...
40
5.6
252 gb|AF317102.1| Dumontia alaskana specimen-voucher GWS000916 (UNB...
40
5.6
253 gb|AF317101.1| Dumontia alaskana specimen-voucher G0221 (UNB) sm...
40
5.6
254 gb|M84344.1|ATHGTIP Arabidopsis thaliana tonoplast intrinsic pro...
40
5.6
255 dbj|AB054056.1| Hordeum vulgare waxy gene, partial sequence, cul...
40
5.6
256 dbj|AB054055.2| Hordeum vulgare waxy gene, partial sequence, cul...
40
5.6
257 emb|AL772162.4| Mouse DNA sequence from clone RP23-175J8 on chro...
40
5.6
>emb| X80266.1 |HVGTIPP H.vulgare mRNA for gamma-TIP-like protein
Length = 1020
Score = 757 bits (382), Expect = 0.0
Identities = 382/382 (100%)
Strand = Plus / Minus
Query: 39 gaattcacaggttttacacaagcaaattgacagggtcgatcgtcacaggtttcacagcac 98
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1020 gaattcacaggttttacacaagcaaattgacagggtcgatcgtcacaggtttcacagcac 961
Query: 99 cacaaactgatggaccgatcgaccctgggaatgggatggattcattcattcaaagcaaac 158
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 cacaaactgatggaccgatcgaccctgggaatgggatggattcattcattcaaagcaaac 901
Query: 159 ttaaacgactcatgactggaagcaaggggagacgcgatcgaccacacggacggacgggcg 218
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 ttaaacgactcatgactggaagcaaggggagacgcgatcgaccacacggacggacgggcg 841
Query: 219 ggcggggggcaggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcg 278
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 ggcggggggcaggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcg 781
Query: 279 ggagatgaagagcagctcgtagatgacgccggcgaggccgccgccgatgagggggccgac 338
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 ggagatgaagagcagctcgtagatgacgccggcgaggccgccgccgatgagggggccgac 721
Query: 339 ccagtacacccactggtacccccactcccagctgacgagggcggggccgaaggagacggc 398
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 ccagtacacccactggtacccccactcccagctgacgagggcggggccgaaggagacggc 661
Query: 399 ggggttcatggacgcgccggag 420
||||||||||||||||||||||
Sbjct: 660 ggggttcatggacgcgccggag 639
>gb| U86762.1 |TAU86762 Triticum aestivum gamma-type tonoplast intrinsic protein mRNA,
complete cds
Length = 1133
Score = 349 bits (176), Expect = 5e-93
Identities = 176/176 (100%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtagatga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 agtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtagatga 786
Query: 305 cgccggcgaggccgccgccgatgagggggccgacccagtacacccactggtacccccact 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 cgccggcgaggccgccgccgatgagggggccgacccagtacacccactggtacccccact 726
Query: 365 cccagctgacgagggcggggccgaaggagacggcggggttcatggacgcgccggag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 cccagctgacgagggcggggccgaaggagacggcggggttcatggacgcgccggag 670
Score = 63.9 bits (32), Expect = 4e-07
Identities = 66/76 (86%), Gaps = 6/76 (7%)
Strand = Plus / Minus
Query: 6 aactcaactgaacttgaaattactcgggcgga-----cgaattcacaggttttacacaag 60
||||||||| ||||||||||||||||||||| ||||||||||| ||||||| |||
Sbjct: 1101 aactcaactcaacttgaaattactcgggcgggacgggcgaattcacag-ttttacagaag 1043
Query: 61 caaattgacagggtcg 76
||||||||||| ||||
Sbjct: 1042 caaattgacagtgtcg 1027
Score = 44.1 bits (22), Expect = 0.36
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 151 aagcaaacttaaacgactcatg 172
||||||||||||||||||||||
Sbjct: 977 aagcaaacttaaacgactcatg 956
>gb| AY243803.1 | Zea mays tonoplast water channel (TIP1-1) mRNA, complete cds
Length = 1039
Score = 315 bits (159), Expect = 6e-83
Identities = 171/175 (97%)
Strand = Plus / Minus
Query: 243 ttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtagat 302
|||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 754 ttagtagtcggtggaggggagctgctcgtgggtgtgggagatgaagagcagctcgtagat 695
Query: 303 gacgccggcgaggccgccgccgatgagggggccgacccagtacacccactggtaccccca 362
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 694 gacgccggcgaggccgccgccgatgagggggccgacccagtacacccactggtagcccca 635
Query: 363 ctcccagctgacgagggcggggccgaaggagacggcggggttcatggacgcgccg 417
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 634 ctcccagctgacgagggcggggccgaaggacacggcggggttcatggacgcgccg 580
>gb| AY104464.1 | Zea mays PCO114899 mRNA sequence
Length = 1167
Score = 315 bits (159), Expect = 6e-83
Identities = 171/175 (97%)
Strand = Plus / Minus
Query: 243 ttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtagat 302
|||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 849 ttagtagtcggtggaggggagctgctcgtgggtgtgggagatgaagagcagctcgtagat 790
Query: 303 gacgccggcgaggccgccgccgatgagggggccgacccagtacacccactggtaccccca 362
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 789 gacgccggcgaggccgccgccgatgagggggccgacccagtacacccactggtagcccca 730
Query: 363 ctcccagctgacgagggcggggccgaaggagacggcggggttcatggacgcgccg 417
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 729 ctcccagctgacgagggcggggccgaaggacacggcggggttcatggacgcgccg 675
>gb| BT016300.1 | Zea mays clone Contig133 mRNA sequence
Length = 1112
Score = 307 bits (155), Expect = 2e-80
Identities = 170/175 (97%)
Strand = Plus / Minus
Query: 243 ttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtagat 302
|||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 850 ttagtagtcggtggaggggagctgctcgtgggtgtgggagatgaagagcagctcgtagat 791
Query: 303 gacgccggcgaggccgccgccgatgagggggccgacccagtacacccactggtaccccca 362
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 790 gacgccggcgaggccgccgccgatgaggggcccgacccagtacacccactggtagcccca 731
Query: 363 ctcccagctgacgagggcggggccgaaggagacggcggggttcatggacgcgccg 417
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 730 ctcccagctgacgagggcggggccgaaggacacggcggggttcatggacgcgccg 676
>gb| AF037061.1 |AF037061 Zea mays tonoplast intrinsic protein (ZmTIP1) mRNA, complete cds
Length = 1097
Score = 307 bits (155), Expect = 2e-80
Identities = 170/175 (97%)
Strand = Plus / Minus
Query: 243 ttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtagat 302
|||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 846 ttagtagtcggtggaggggagctgctcgtgggtgtgggagatgaagagcagctcgtagat 787
Query: 303 gacgccggcgaggccgccgccgatgagggggccgacccagtacacccactggtaccccca 362
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||
Sbjct: 786 gacgccggcgaggccgccgccgatgaggggcccgacccagtacacccactggtagcccca 727
Query: 363 ctcccagctgacgagggcggggccgaaggagacggcggggttcatggacgcgccg 417
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 726 ctcccagctgacgagggcggggccgaaggacacggcggggttcatggacgcgccg 672
>gb| DP000009.1 | Oryza sativa (japonica cultivar-group) chromosome 3
Length = 36102668
Score = 254 bits (128), Expect = 2e-64
Identities = 173/188 (92%)
Strand = Plus / Plus
Query: 230 ggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaaga 289
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2544716 ggcggcgatgagcttagtagtcggtggtggggagctgctcgtgggtgtgggagatgaaga 2544775
Query: 290 gcagctcgtagatgacgccggcgaggccgccgccgatgagggggccgacccagtacaccc 349
| | |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||
Sbjct: 2544776 ggacctcgtagatgacgccggcgaggccaccgccgatgagtgggccaacccagtacaccc 2544835
Query: 350 actggtacccccactcccagctgacgagggcggggccgaaggagacggcggggttcatgg 409
||||| || |||| ||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 2544836 actgggactcccaggaccagctgacgagggccgggccgaaggagacggccgggttcatgg 2544895
Query: 410 acgcgccg 417
| ||||||
Sbjct: 2544896 aggcgccg 2544903
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 8319519 acggacggacgggcgggcggg 8319499
>gb| AC090485.3 |AC090485 Genomic Sequence for Oryza sativa, Nipponbare strain, clone
OSJNBa0067N01, from chromosome 3, complete sequence
Length = 159636
Score = 254 bits (128), Expect = 2e-64
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 230 ggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaaga 289
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 125378 ggcggcgatgagcttagtagtcggtggtggggagctgctcgtgggtgtgggagatgaaga 125319
Query: 290 gcagctcgtagatgacgccggcgaggccgccgccgatgagggggccgacccagtacaccc 349
| | |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||
Sbjct: 125318 ggacctcgtagatgacgccggcgaggccaccgccgatgagtgggccaacccagtacaccc 125259
Query: 350 actggtacccccactcccagctgacgagggcggggccgaaggagacggcggggttcatgg 409
||||| || |||| ||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 125258 actgggactcccaggaccagctgacgagggccgggccgaaggagacggccgggttcatgg 125199
Query: 410 acgcgccg 417
| ||||||
Sbjct: 125198 aggcgccg 125191
>dbj| AP008209.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
sequence
Length = 36192742
Score = 254 bits (128), Expect = 2e-64
Identities = 173/188 (92%)
Strand = Plus / Plus
Query: 230 ggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaaga 289
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 2544826 ggcggcgatgagcttagtagtcggtggtggggagctgctcgtgggtgtgggagatgaaga 2544885
Query: 290 gcagctcgtagatgacgccggcgaggccgccgccgatgagggggccgacccagtacaccc 349
| | |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||
Sbjct: 2544886 ggacctcgtagatgacgccggcgaggccaccgccgatgagtgggccaacccagtacaccc 2544945
Query: 350 actggtacccccactcccagctgacgagggcggggccgaaggagacggcggggttcatgg 409
||||| || |||| ||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 2544946 actgggactcccaggaccagctgacgagggccgggccgaaggagacggccgggttcatgg 2545005
Query: 410 acgcgccg 417
| ||||||
Sbjct: 2545006 aggcgccg 2545013
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 8317354 acggacggacgggcgggcggg 8317334
>dbj| D25534.1 |RICYK333 Oryza sativa yk333 mRNA for gamma-Tip, complete cds
Length = 1080
Score = 254 bits (128), Expect = 2e-64
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 230 ggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaaga 289
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 844 ggcggcgatgagcttagtagtcggtggtggggagctgctcgtgggtgtgggagatgaaga 785
Query: 290 gcagctcgtagatgacgccggcgaggccgccgccgatgagggggccgacccagtacaccc 349
| | |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||
Sbjct: 784 ggacctcgtagatgacgccggcgaggccaccgccgatgagtgggccaacccagtacaccc 725
Query: 350 actggtacccccactcccagctgacgagggcggggccgaaggagacggcggggttcatgg 409
||||| || |||| ||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 724 actgggactcccaggaccagctgacgagggccgggccgaaggagacggccgggttcatgg 665
Query: 410 acgcgccg 417
| ||||||
Sbjct: 664 aggcgccg 657
>dbj| AK104123.1 | Oryza sativa (japonica cultivar-group) cDNA clone:006-203-C12, full
insert sequence
Length = 1034
Score = 254 bits (128), Expect = 2e-64
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 230 ggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaaga 289
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 853 ggcggcgatgagcttagtagtcggtggtggggagctgctcgtgggtgtgggagatgaaga 794
Query: 290 gcagctcgtagatgacgccggcgaggccgccgccgatgagggggccgacccagtacaccc 349
| | |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||
Sbjct: 793 ggacctcgtagatgacgccggcgaggccaccgccgatgagtgggccaacccagtacaccc 734
Query: 350 actggtacccccactcccagctgacgagggcggggccgaaggagacggcggggttcatgg 409
||||| || |||| ||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 733 actgggactcccaggaccagctgacgagggccgggccgaaggagacggccgggttcatgg 674
Query: 410 acgcgccg 417
| ||||||
Sbjct: 673 aggcgccg 666
>dbj| AK068986.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023003E16, full
insert sequence
Length = 1082
Score = 254 bits (128), Expect = 2e-64
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 230 ggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaaga 289
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 855 ggcggcgatgagcttagtagtcggtggtggggagctgctcgtgggtgtgggagatgaaga 796
Query: 290 gcagctcgtagatgacgccggcgaggccgccgccgatgagggggccgacccagtacaccc 349
| | |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||
Sbjct: 795 ggacctcgtagatgacgccggcgaggccaccgccgatgagtgggccaacccagtacaccc 736
Query: 350 actggtacccccactcccagctgacgagggcggggccgaaggagacggcggggttcatgg 409
||||| || |||| ||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 735 actgggactcccaggaccagctgacgagggccgggccgaaggagacggccgggttcatgg 676
Query: 410 acgcgccg 417
| ||||||
Sbjct: 675 aggcgccg 668
>dbj| AK059438.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-027-G11, full
insert sequence
Length = 551
Score = 254 bits (128), Expect = 2e-64
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 230 ggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaaga 289
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 379 ggcggcgatgagcttagtagtcggtggtggggagctgctcgtgggtgtgggagatgaaga 320
Query: 290 gcagctcgtagatgacgccggcgaggccgccgccgatgagggggccgacccagtacaccc 349
| | |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||
Sbjct: 319 ggacctcgtagatgacgccggcgaggccaccgccgatgagtgggccaacccagtacaccc 260
Query: 350 actggtacccccactcccagctgacgagggcggggccgaaggagacggcggggttcatgg 409
||||| || |||| ||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 259 actgggactcccaggaccagctgacgagggccgggccgaaggagacggccgggttcatgg 200
Query: 410 acgcgccg 417
| ||||||
Sbjct: 199 aggcgccg 192
>dbj| AK058322.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B06, full
insert sequence
Length = 1055
Score = 254 bits (128), Expect = 2e-64
Identities = 173/188 (92%)
Strand = Plus / Minus
Query: 230 ggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaaga 289
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 851 ggcggcgatgagcttagtagtcggtggtggggagctgctcgtgggtgtgggagatgaaga 792
Query: 290 gcagctcgtagatgacgccggcgaggccgccgccgatgagggggccgacccagtacaccc 349
| | |||||||||||||||||||||||| ||||||||||| ||||| |||||||||||||
Sbjct: 791 ggacctcgtagatgacgccggcgaggccaccgccgatgagtgggccaacccagtacaccc 732
Query: 350 actggtacccccactcccagctgacgagggcggggccgaaggagacggcggggttcatgg 409
||||| || |||| ||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct: 731 actgggactcccaggaccagctgacgagggccgggccgaaggagacggccgggttcatgg 672
Query: 410 acgcgccg 417
| ||||||
Sbjct: 671 aggcgccg 664
>ref| XM_470213.1 | Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 753
Score = 236 bits (119), Expect = 5e-59
Identities = 161/175 (92%)
Strand = Plus / Minus
Query: 243 ttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtagat 302
|||||||||||||||||||||||||||||||||| ||||||||||||| | |||||||||
Sbjct: 753 ttagtagtcggtggtggggagctgctcgtgggtgtgggagatgaagaggacctcgtagat 694
Query: 303 gacgccggcgaggccgccgccgatgagggggccgacccagtacacccactggtaccccca 362
||||||||||||||| ||||||||||| ||||| |||||||||||||||||| || ||||
Sbjct: 693 gacgccggcgaggccaccgccgatgagtgggccaacccagtacacccactgggactccca 634
Query: 363 ctcccagctgacgagggcggggccgaaggagacggcggggttcatggacgcgccg 417
||||||||||||||| ||||||||||||||||| ||||||||||| ||||||
Sbjct: 633 ggaccagctgacgagggccgggccgaaggagacggccgggttcatggaggcgccg 579
>dbj| AK060994.1 | Oryza sativa (japonica cultivar-group) cDNA clone:006-203-E02, full
insert sequence
Length = 870
Score = 155 bits (78), Expect = 1e-34
Identities = 93/98 (94%)
Strand = Plus / Minus
Query: 230 ggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaaga 289
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 689 ggcggcgatgagcttagtagtcggtggtggggagctgctcgtgggtgtgggagatgaaga 630
Query: 290 gcagctcgtagatgacgccggcgaggccgccgccgatg 327
| | |||||||||||||||||||||||| |||||||||
Sbjct: 629 ggacctcgtagatgacgccggcgaggccaccgccgatg 592
>emb| AJ242805.1 |SST242805 Sporobolus stapfianus mRNA for putative gamma tonoplast intrinsic
protein (TIP)
Length = 1146
Score = 115 bits (58), Expect = 1e-22
Identities = 150/180 (83%), Gaps = 3/180 (1%)
Strand = Plus / Minus
Query: 241 gcttagtagtcggtggtggggagctgctcgtgggtgcgggag---atgaagagcagctcg 297
|||||||||||||||||||||||||||||||||||| ||||| |||||||||| |||
Sbjct: 837 gcttagtagtcggtggtggggagctgctcgtgggtgtgggaggagatgaagagcatgtcg 778
Query: 298 tagatgacgccggcgaggccgccgccgatgagggggccgacccagtacacccactggtac 357
|| || | | ||||| | | ||||||| |||||||||||||||||||| ||||
Sbjct: 777 tatataagtgcagcgagtgcagcaccgatgaacgggccgacccagtacacccagtggttg 718
Query: 358 ccccactcccagctgacgagggcggggccgaaggagacggcggggttcatggacgcgccg 417
||| |||||||||||| | |||||||||||| ||||||||||||||||||||||||
Sbjct: 717 ttccaggaccagctgacgagcgaggggccgaaggacacggcggggttcatggacgcgccg 658
>dbj| AK110727.1 | Oryza sativa (japonica cultivar-group) cDNA clone:002-170-E06, full
insert sequence
Length = 1024
Score = 107 bits (54), Expect = 3e-20
Identities = 84/94 (89%)
Strand = Plus / Plus
Query: 324 gatgagggggccgacccagtacacccactggtacccccactcccagctgacgagggcggg 383
|||||| ||||| |||||||||||||||||| || |||| ||||||||||||||| ||
Sbjct: 219 gatgagtgggccaacccagtacacccactgggactcccaggaccagctgacgagggccgg 278
Query: 384 gccgaaggagacggcggggttcatggacgcgccg 417
||||||||||||||| ||||||||||| ||||||
Sbjct: 279 gccgaaggagacggccgggttcatggaggcgccg 312
Score = 97.6 bits (49), Expect = 3e-17
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 230 ggcggcggtgagcttagtagtcggtggtggggagctgctcgtgggtgcgggagatga 286
||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 167 ggcggcgatgagcttagtagtcggtggtggggagctgctcgtgggtgtgggagatga 223
>dbj| AB206104.1 | Mimosa pudica tip1;1 mRNA for tonoplast intrinsic protein 1;1,
complete cds
Length = 1067
Score = 89.7 bits (45), Expect = 7e-15
Identities = 96/113 (84%)
Strand = Plus / Minus
Query: 243 ttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtagat 302
|||||| ||||||||||||||||||||||||||| |||||||||||| | || |||||
Sbjct: 826 ttagtaatcggtggtggggagctgctcgtgggtgtgggagatgaagataacttcatagat 767
Query: 303 gacgccggcgaggccgccgccgatgagggggccgacccagtacacccactggt 355
||| || || ||||| || || || || |||||||||||||| ||||| ||||
Sbjct: 766 gaccccagcaaggccacctccaataagtgggccgacccagtagacccagtggt 714
>gb| AF326500.1 |AF326500 Zea mays tonoplast membrane integral protein ZmTIP1-2 mRNA,
complete cds
Length = 1021
Score = 85.7 bits (43), Expect = 1e-13
Identities = 76/87 (87%)
Strand = Plus / Minus
Query: 331 gggccgacccagtacacccactggtacccccactcccagctgacgagggcggggccgaag 390
|||||||||||||||||||| |||| | |||| | | | |||||| ||| |||||||||
Sbjct: 682 gggccgacccagtacacccagtggttctcccagacgccggtgacgacggccgggccgaag 623
Query: 391 gagacggcggggttcatggacgcgccg 417
|||||||||||||||||||| ||||||
Sbjct: 622 gagacggcggggttcatggaggcgccg 596
>ref| NM_189497.1 | Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 759
Score = 77.8 bits (39), Expect = 3e-11
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 371 tgacgagggcggggccgaaggagacggcggggttcatggacgcgccg 417
|||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 628 tgacgacggcggggccgaaggagacggcggggttcatggaggcgccg 582
>dbj| AP008207.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
sequence
Length = 43261740
Score = 77.8 bits (39), Expect = 3e-11
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 371 tgacgagggcggggccgaaggagacggcggggttcatggacgcgccg 417
|||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 43108799 tgacgacggcggggccgaaggagacggcggggttcatggaggcgccg 43108845
Score = 58.0 bits (29), Expect = 2e-05
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacacccactggt 355
|||||||||||| ||||||||| ||| |||| |||||||||||| ||||
Sbjct: 6644922 ccggcgaggccggcgccgatgaagggaccgagccagtacacccagtggt 6644970
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 374 cgagggcggggccgaaggagacggcggggttcatggacgcgccggag 420
||||||| |||||||||||| ||| ||||||||||| |||||||||
Sbjct: 7297479 cgagggccgggccgaaggagcgggccgggttcatggaggcgccggag 7297433
>dbj| AP003627.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0459B04
Length = 142475
Score = 77.8 bits (39), Expect = 3e-11
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 371 tgacgagggcggggccgaaggagacggcggggttcatggacgcgccg 417
|||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 105828 tgacgacggcggggccgaaggagacggcggggttcatggaggcgccg 105874
>dbj| AK111768.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023066H10, full
insert sequence
Length = 1346
Score = 77.8 bits (39), Expect = 3e-11
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 371 tgacgagggcggggccgaaggagacggcggggttcatggacgcgccg 417
|||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 652 tgacgacggcggggccgaaggagacggcggggttcatggaggcgccg 606
>dbj| AK111747.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023050B20, full
insert sequence
Length = 1149
Score = 77.8 bits (39), Expect = 3e-11
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 371 tgacgagggcggggccgaaggagacggcggggttcatggacgcgccg 417
|||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 701 tgacgacggcggggccgaaggagacggcggggttcatggaggcgccg 655
>dbj| AB114829.1 | Oryza sativa (japonica cultivar-group) OsTIP1 mRNA for tonoplast
intrinsic protein, complete cds
Length = 970
Score = 77.8 bits (39), Expect = 3e-11
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 371 tgacgagggcggggccgaaggagacggcggggttcatggacgcgccg 417
|||||| ||||||||||||||||||||||||||||||||| ||||||
Sbjct: 638 tgacgacggcggggccgaaggagacggcggggttcatggaggcgccg 592
>emb| AJ005078.2 |PAAJ5078 Picea abies mRNA for aquaporin-like protein
Length = 1007
Score = 71.9 bits (36), Expect = 2e-09
Identities = 42/44 (95%)
Strand = Plus / Minus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacaccca 350
||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 763 ccggcaaggccgcctccgatgagggggccgacccagtacaccca 720
>dbj| AP008212.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 71.9 bits (36), Expect = 2e-09
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 297 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 344
||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 13251082 gtagacgaggccggcgaggccgccgccgacgagggggccgacccagta 13251035
Score = 40.1 bits (20), Expect = 5.6
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 369 gctgacgagggcggggccgaaggagacggcggggttcatggacgcgccggag 420
|||| ||| |||||||||||||||| || ||||||||||| ||||||||
Sbjct: 13251010 gctggcgacggcggggccgaaggagcgcgccgggttcatggagccgccggag 13250959
>dbj| AP005449.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0427E01
Length = 146395
Score = 71.9 bits (36), Expect = 2e-09
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 297 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 344
||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 12892 gtagacgaggccggcgaggccgccgccgacgagggggccgacccagta 12845
Score = 40.1 bits (20), Expect = 5.6
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 369 gctgacgagggcggggccgaaggagacggcggggttcatggacgcgccggag 420
|||| ||| |||||||||||||||| || ||||||||||| ||||||||
Sbjct: 12820 gctggcgacggcggggccgaaggagcgcgccgggttcatggagccgccggag 12769
>dbj| AP004784.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
clone:OSJNBa0012F14
Length = 168629
Score = 71.9 bits (36), Expect = 2e-09
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 297 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 344
||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 168270 gtagacgaggccggcgaggccgccgccgacgagggggccgacccagta 168223
Score = 40.1 bits (20), Expect = 5.6
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 369 gctgacgagggcggggccgaaggagacggcggggttcatggacgcgccggag 420
|||| ||| |||||||||||||||| || ||||||||||| ||||||||
Sbjct: 168198 gctggcgacggcggggccgaaggagcgcgccgggttcatggagccgccggag 168147
>dbj| AK104464.1 | Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C06, full
insert sequence
Length = 1194
Score = 71.9 bits (36), Expect = 2e-09
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 297 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 344
||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 782 gtagacgaggccggcgaggccgccgccgacgagggggccgacccagta 735
Score = 40.1 bits (20), Expect = 5.6
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 369 gctgacgagggcggggccgaaggagacggcggggttcatggacgcgccggag 420
|||| ||| |||||||||||||||| || ||||||||||| ||||||||
Sbjct: 710 gctggcgacggcggggccgaaggagcgcgccgggttcatggagccgccggag 659
>dbj| AK104377.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-035-G09, full
insert sequence
Length = 1196
Score = 71.9 bits (36), Expect = 2e-09
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 297 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 344
||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 784 gtagacgaggccggcgaggccgccgccgacgagggggccgacccagta 737
>dbj| AK104270.1 | Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F03, full
insert sequence
Length = 1214
Score = 71.9 bits (36), Expect = 2e-09
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 297 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 344
||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 784 gtagacgaggccggcgaggccgccgccgacgagggggccgacccagta 737
Score = 40.1 bits (20), Expect = 5.6
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 369 gctgacgagggcggggccgaaggagacggcggggttcatggacgcgccggag 420
|||| ||| |||||||||||||||| || ||||||||||| ||||||||
Sbjct: 712 gctggcgacggcggggccgaaggagcgcgccgggttcatggagccgccggag 661
>dbj| AK100193.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023036J06, full
insert sequence
Length = 1074
Score = 71.9 bits (36), Expect = 2e-09
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 297 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 344
||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 662 gtagacgaggccggcgaggccgccgccgacgagggggccgacccagta 615
Score = 40.1 bits (20), Expect = 5.6
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 369 gctgacgagggcggggccgaaggagacggcggggttcatggacgcgccggag 420
|||| ||| |||||||||||||||| || ||||||||||| ||||||||
Sbjct: 590 gctggcgacggcggggccgaaggagcgcgccgggttcatggagccgccggag 539
>dbj| AK099616.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013050J20, full
insert sequence
Length = 1197
Score = 71.9 bits (36), Expect = 2e-09
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 297 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 344
||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 785 gtagacgaggccggcgaggccgccgccgacgagggggccgacccagta 738
Score = 40.1 bits (20), Expect = 5.6
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 369 gctgacgagggcggggccgaaggagacggcggggttcatggacgcgccggag 420
|||| ||| |||||||||||||||| || ||||||||||| ||||||||
Sbjct: 713 gctggcgacggcggggccgaaggagcgcgccgggttcatggagccgccggag 662
>dbj| AK099141.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023055A02, full
insert sequence
Length = 1195
Score = 71.9 bits (36), Expect = 2e-09
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 297 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 344
||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 783 gtagacgaggccggcgaggccgccgccgacgagggggccgacccagta 736
Score = 40.1 bits (20), Expect = 5.6
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 369 gctgacgagggcggggccgaaggagacggcggggttcatggacgcgccggag 420
|||| ||| |||||||||||||||| || ||||||||||| ||||||||
Sbjct: 711 gctggcgacggcggggccgaaggagcgcgccgggttcatggagccgccggag 660
>dbj| AK099015.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J013116H02, full
insert sequence
Length = 1202
Score = 71.9 bits (36), Expect = 2e-09
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 297 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 344
||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 785 gtagacgaggccggcgaggccgccgccgacgagggggccgacccagta 738
Score = 40.1 bits (20), Expect = 5.6
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 369 gctgacgagggcggggccgaaggagacggcggggttcatggacgcgccggag 420
|||| ||| |||||||||||||||| || ||||||||||| ||||||||
Sbjct: 713 gctggcgacggcggggccgaaggagcgcgccgggttcatggagccgccggag 662
>dbj| AK073531.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J033044F19, full
insert sequence
Length = 1220
Score = 71.9 bits (36), Expect = 2e-09
Identities = 45/48 (93%)
Strand = Plus / Minus
Query: 297 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 344
||||| || |||||||||||||||||||| ||||||||||||||||||
Sbjct: 783 gtagacgaggccggcgaggccgccgccgacgagggggccgacccagta 736
Score = 40.1 bits (20), Expect = 5.6
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 369 gctgacgagggcggggccgaaggagacggcggggttcatggacgcgccggag 420
|||| ||| |||||||||||||||| || ||||||||||| ||||||||
Sbjct: 711 gctggcgacggcggggccgaaggagcgcgccgggttcatggagccgccggag 660
>gb| AY112388.1 | Zea mays CL24208_1 mRNA sequence
Length = 833
Score = 71.9 bits (36), Expect = 2e-09
Identities = 74/87 (85%)
Strand = Plus / Plus
Query: 331 gggccgacccagtacacccactggtacccccactcccagctgacgagggcggggccgaag 390
|||||||||||||||||||| |||| | |||| | | | |||||| || |||||||||
Sbjct: 329 gggccgacccagtacacccagtggttctcccagacgccggtgacgacagccgggccgaag 388
Query: 391 gagacggcggggttcatggacgcgccg 417
|||||||||| ||||||||| ||||||
Sbjct: 389 gagacggcggngttcatggaggcgccg 415
>gb| AY525639.1 | Triticum aestivum delta tonoplast intrinsic protein TIP2;1 mRNA,
complete cds
Length = 817
Score = 67.9 bits (34), Expect = 2e-08
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 297 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagtacaccca 350
||||| ||||||||||||||| ||||||||||| |||||| ||||||| |||||
Sbjct: 748 gtagacgacgccggcgaggccaccgccgatgagcgggccggcccagtagaccca 695
Score = 46.1 bits (23), Expect = 0.091
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcggggttcatggacgcgccggag 420
|||||||||||||||| || |||||||||||| ||||||||
Sbjct: 667 ggcggggccgaaggagcgtgcagggttcatggacccgccggag 625
>ref| XM_467137.1 | Oryza sativa (japonica cultivar-group), mRNA
Length = 747
Score = 63.9 bits (32), Expect = 4e-07
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacaccca 350
|||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 683 ccggcgaggccgccgccgatcagcgggccgacccagtagaccca 640
>gb| AY525641.1 | Triticum aestivum delta tonoplast intrinsic protein TIP2;3 mRNA,
complete cds
Length = 829
Score = 63.9 bits (32), Expect = 4e-07
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 297 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 344
||||| ||||||||||||||| ||||||||||| |||||| |||||||
Sbjct: 744 gtagacgacgccggcgaggccaccgccgatgagcgggccggcccagta 697
Score = 46.1 bits (23), Expect = 0.091
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcggggttcatggacgcgccggag 420
|||||||||||||||| || |||||||||||| ||||||||
Sbjct: 663 ggcggggccgaaggagcgtgcagggttcatggacccgccggag 621
>gb| AY525640.1 | Triticum aestivum delta tonoplast intrinsic protein TIP2;2 mRNA,
complete cds
Length = 853
Score = 63.9 bits (32), Expect = 4e-07
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 297 gtagatgacgccggcgaggccgccgccgatgagggggccgacccagta 344
||||| ||||||||||||||| ||||||||||| |||||| |||||||
Sbjct: 747 gtagacgacgccggcgaggccaccgccgatgagcgggccggcccagta 700
Score = 46.1 bits (23), Expect = 0.091
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcggggttcatggacgcgccggag 420
|||||||||||||||| || |||||||||||| ||||||||
Sbjct: 666 ggcggggccgaaggagcgtgcagggttcatggacccgccggag 624
>dbj| AP008208.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 63.9 bits (32), Expect = 4e-07
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacaccca 350
|||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 26627183 ccggcgaggccgccgccgatcagcgggccgacccagtagaccca 26627226
>gb| AF326508.1 |AF326508 Zea mays tonoplast membrane integral protein ZmTIP4-4 mRNA,
complete cds
Length = 955
Score = 63.9 bits (32), Expect = 4e-07
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 373 acgagggcggggccgaaggagacggcggggttcatggacgcgccggag 420
||||| ||||||||||||||| ||||||||||||||||||||||||
Sbjct: 714 acgagcgcggggccgaaggagcgcgcggggttcatggacgcgccggag 667
>dbj| AP005006.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0519E06
Length = 170634
Score = 63.9 bits (32), Expect = 4e-07
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacaccca 350
|||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 169564 ccggcgaggccgccgccgatcagcgggccgacccagtagaccca 169607
>dbj| AP005289.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OJ1112_F09
Length = 139371
Score = 63.9 bits (32), Expect = 4e-07
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacaccca 350
|||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 61344 ccggcgaggccgccgccgatcagcgggccgacccagtagaccca 61387
>dbj| AB114830.1 | Oryza sativa (japonica cultivar-group) OsTIP2 mRNA for tonoplast
intrinsic protein, complete cds
Length = 1013
Score = 63.9 bits (32), Expect = 4e-07
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacaccca 350
|||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 756 ccggcgaggccgccgccgatcagcgggccgacccagtagaccca 713
>dbj| AK064728.1 | Oryza sativa (japonica cultivar-group) cDNA clone:002-120-A10, full
insert sequence
Length = 873
Score = 63.9 bits (32), Expect = 4e-07
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacaccca 350
|||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 558 ccggcgaggccgccgccgatcagcgggccgacccagtagaccca 515
>gb| AY821911.1 | Gossypium hirsutum putative tonoplast intrinsic protein mRNA,
partial cds
Length = 529
Score = 63.9 bits (32), Expect = 4e-07
Identities = 86/104 (82%)
Strand = Plus / Minus
Query: 241 gcttagtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtag 300
||||| || |||||||| |||||||||||||||||| | |||||||| | |||||||
Sbjct: 417 gcttaataatcggtggttgggagctgctcgtgggtgttgctgatgaagatgaactcgtag 358
Query: 301 atgacgccggcgaggccgccgccgatgagggggccgacccagta 344
|||| || ||||| || || ||||| ||||| |||||||||||
Sbjct: 357 atgagaccagcgagcccaccaccgataaggggtccgacccagta 314
>gb| U86763.1 |TAU86763 Triticum aestivum delta-type tonoplast intrinsic protein mRNA,
complete cds
Length = 1067
Score = 63.9 bits (32), Expect = 4e-07
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 303 gacgccggcgaggccgccgccgatgagggggccgacccagtacaccca 350
||||||||||||||| ||||||||||| |||||| ||||||| |||||
Sbjct: 744 gacgccggcgaggccaccgccgatgagcgggccggcccagtaaaccca 697
Score = 44.1 bits (22), Expect = 0.36
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcggggttcatggacgcgccgga 419
|||||||||||||||| || |||||||||||| |||||||
Sbjct: 669 ggcggggccgaaggagcgtgcagggttcatggacccgccgga 628
>emb| AJ307662.1 |OSA307662 Oryza sativa genomic DNA fragment, chromosome 2
Length = 339972
Score = 63.9 bits (32), Expect = 4e-07
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacaccca 350
|||||||||||||||||||| || |||||||||||||| |||||
Sbjct: 250651 ccggcgaggccgccgccgatcagcgggccgacccagtagaccca 250608
>ref| NM_197137.1 | Oryza sativa (japonica cultivar-group) putative beta-tonoplast
intrinsic protein (OSJNBa0051D19.19), mRNA
Length = 1186
Score = 61.9 bits (31), Expect = 2e-06
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacacccactggtacccccactcc 366
|||||||||||| |||||| || |||||||| |||||||||||| |||| || ||| |
Sbjct: 855 ccggcgaggccggcgccgacgaaggggccgagccagtacacccagtggtgcctccagcgc 796
Query: 367 cagctgacgagggcggggccgaa 389
|||| |||||| || ||||||||
Sbjct: 795 cagccgacgagcgccgggccgaa 773
>ref| NM_189871.1 | Oryza sativa (japonica cultivar-group), mRNA
Length = 576
Score = 61.9 bits (31), Expect = 2e-06
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacacccactggtacccccactcc 366
|||||||||||| | ||||||| |||||||| |||||||||||| |||| || ||| | |
Sbjct: 512 ccggcgaggccggcaccgatgaaggggccgagccagtacacccagtggtgcctccagtgc 453
Query: 367 cagctgacgag 377
|||| ||||||
Sbjct: 452 cagccgacgag 442
>gb| AC023240.9 | Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete
sequence
Length = 131984
Score = 61.9 bits (31), Expect = 2e-06
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacacccactggtacccccactcc 366
|||||||||||| |||||| || |||||||| |||||||||||| |||| || ||| |
Sbjct: 26108 ccggcgaggccggcgccgacgaaggggccgagccagtacacccagtggtgcctccagcgc 26167
Query: 367 cagctgacgagggcggggccgaa 389
|||| |||||| || ||||||||
Sbjct: 26168 cagccgacgagcgccgggccgaa 26190
>dbj| AP008216.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
sequence
Length = 22685906
Score = 61.9 bits (31), Expect = 2e-06
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacacccactggtacccccactcc 366
|||||||||||| |||||| || |||||||| |||||||||||| |||| || ||| |
Sbjct: 18187020 ccggcgaggccggcgccgacgaaggggccgagccagtacacccagtggtgcctccagcgc 18186961
Query: 367 cagctgacgagggcggggccgaa 389
|||| |||||| || ||||||||
Sbjct: 18186960 cagccgacgagcgccgggccgaa 18186938
>dbj| AP008213.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
sequence
Length = 29644043
Score = 61.9 bits (31), Expect = 2e-06
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacacccactggtacccccactcc 366
|||||||||||| | ||||||| |||||||| |||||||||||| |||| || ||| | |
Sbjct: 25641777 ccggcgaggccggcaccgatgaaggggccgagccagtacacccagtggtgcctccagtgc 25641836
Query: 367 cagctgacgag 377
|||| ||||||
Sbjct: 25641837 cagccgacgag 25641847
>gb| AF326502.1 |AF326502 Zea mays tonoplast membrane integral protein ZmTIP2-2 mRNA,
complete cds
Length = 1073
Score = 61.9 bits (31), Expect = 2e-06
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 296 cgtagatgacgccggcgaggccgccgccgatgagggggccgacccagtacaccca 350
|||||| || ||| ||||| |||||||||||||| |||||||||||||| |||||
Sbjct: 764 cgtagacgaggccagcgagtccgccgccgatgagcgggccgacccagtagaccca 710
Score = 50.1 bits (25), Expect = 0.006
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcggggttcatgga 410
|||||||||||||||| |||||||||||||||
Sbjct: 682 ggcggggccgaaggagcgggcggggttcatgga 650
>gb| AF326501.1 |AF326501 Zea mays tonoplast membrane integral protein ZmTIP2-1 mRNA,
complete cds
Length = 1110
Score = 61.9 bits (31), Expect = 2e-06
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 296 cgtagatgacgccggcgaggccgccgccgatgagggggccgacccagtacaccca 350
|||||| || ||| |||||||||||||||| ||| |||||||||||||| |||||
Sbjct: 921 cgtagacgaggccagcgaggccgccgccgacgagcgggccgacccagtagaccca 867
Score = 50.1 bits (25), Expect = 0.006
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcggggttcatgga 410
|||||||||||||||| |||||||||||||||
Sbjct: 839 ggcggggccgaaggagcgggcggggttcatgga 807
>dbj| AP004380.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
clone:P0594D10
Length = 143200
Score = 61.9 bits (31), Expect = 2e-06
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacacccactggtacccccactcc 366
|||||||||||| | ||||||| |||||||| |||||||||||| |||| || ||| | |
Sbjct: 95750 ccggcgaggccggcaccgatgaaggggccgagccagtacacccagtggtgcctccagtgc 95809
Query: 367 cagctgacgag 377
|||| ||||||
Sbjct: 95810 cagccgacgag 95820
>dbj| AK111931.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C03, full
insert sequence
Length = 1200
Score = 61.9 bits (31), Expect = 2e-06
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacacccactggtacccccactcc 366
|||||||||||| |||||| || |||||||| |||||||||||| |||| || ||| |
Sbjct: 864 ccggcgaggccggcgccgacgaaggggccgagccagtacacccagtggtgcctccagcgc 805
Query: 367 cagctgacgagggcggggccgaa 389
|||| |||||| || ||||||||
Sbjct: 804 cagccgacgagcgccgggccgaa 782
>dbj| AB114828.1 | Oryza sativa (japonica cultivar-group) OsTIP3 mRNA for tonoplast
intrinsic protein, complete cds
Length = 1178
Score = 61.9 bits (31), Expect = 2e-06
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacacccactggtacccccactcc 366
|||||||||||| |||||| || |||||||| |||||||||||| |||| || ||| |
Sbjct: 847 ccggcgaggccggcgccgacgaaggggccgagccagtacacccagtggtgcctccagcgc 788
Query: 367 cagctgacgagggcggggccgaa 389
|||| |||||| || ||||||||
Sbjct: 787 cagccgacgagcgccgggccgaa 765
>dbj| AK106383.1 | Oryza sativa (japonica cultivar-group) cDNA clone:002-102-E03, full
insert sequence
Length = 1787
Score = 61.9 bits (31), Expect = 2e-06
Identities = 70/83 (84%)
Strand = Plus / Plus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacacccactggtacccccactcc 366
|||||||||||| |||||| || |||||||| |||||||||||| |||| || ||| |
Sbjct: 139 ccggcgaggccggcgccgacgaaggggccgagccagtacacccagtggtgcctccagcgc 198
Query: 367 cagctgacgagggcggggccgaa 389
|||| |||||| || ||||||||
Sbjct: 199 cagccgacgagcgccgggccgaa 221
>gb| AY105015.1 | Zea mays PCO137646 mRNA sequence
Length = 1238
Score = 61.9 bits (31), Expect = 2e-06
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 296 cgtagatgacgccggcgaggccgccgccgatgagggggccgacccagtacaccca 350
|||||| || ||| |||||||||||||||| ||| |||||||||||||| |||||
Sbjct: 920 cgtagacgaggccagcgaggccgccgccgacgagcgggccgacccagtagaccca 866
Score = 50.1 bits (25), Expect = 0.006
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcggggttcatgga 410
|||||||||||||||| |||||||||||||||
Sbjct: 838 ggcggggccgaaggagcgggcggggttcatgga 806
>gb| AE016959.3 | Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
Length = 22698374
Score = 61.9 bits (31), Expect = 2e-06
Identities = 70/83 (84%)
Strand = Plus / Minus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacacccactggtacccccactcc 366
|||||||||||| |||||| || |||||||| |||||||||||| |||| || ||| |
Sbjct: 18196273 ccggcgaggccggcgccgacgaaggggccgagccagtacacccagtggtgcctccagcgc 18196214
Query: 367 cagctgacgagggcggggccgaa 389
|||| |||||| || ||||||||
Sbjct: 18196213 cagccgacgagcgccgggccgaa 18196191
>gb| AY243804.1 | Zea mays tonoplast water channel mRNA, complete cds
Length = 968
Score = 60.0 bits (30), Expect = 6e-06
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 313 aggccgccgccgatgagggggccgacccagtacaccca 350
||||| ||||||| ||||||||||||||||||||||||
Sbjct: 680 aggccaccgccgacgagggggccgacccagtacaccca 643
Score = 42.1 bits (21), Expect = 1.4
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcggggttcatgga 410
|||||||||||||||| ||| |||||||||||
Sbjct: 615 ggcggggccgaaggagcgggccgggttcatgga 583
Score = 42.1 bits (21), Expect = 1.4
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcggggttca 406
|||| ||||||||| ||||||||||||||
Sbjct: 276 ggcgaggccgaaggtgacggcggggttca 248
>gb| AF326503.1 |AF326503 Zea mays tonoplast membrane integral protein ZmTIP2-3 mRNA,
complete cds
Length = 1042
Score = 60.0 bits (30), Expect = 6e-06
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 313 aggccgccgccgatgagggggccgacccagtacaccca 350
||||| ||||||| ||||||||||||||||||||||||
Sbjct: 748 aggccaccgccgacgagggggccgacccagtacaccca 711
Score = 42.1 bits (21), Expect = 1.4
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcggggttcatgga 410
|||||||||||||||| ||| |||||||||||
Sbjct: 683 ggcggggccgaaggagcgggccgggttcatgga 651
Score = 42.1 bits (21), Expect = 1.4
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcggggttca 406
|||| ||||||||| ||||||||||||||
Sbjct: 344 ggcgaggccgaaggtgacggcggggttca 316
>gb| AY106931.1 | Zea mays PCO140073 mRNA sequence
Length = 1069
Score = 60.0 bits (30), Expect = 6e-06
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 313 aggccgccgccgatgagggggccgacccagtacaccca 350
||||| ||||||| ||||||||||||||||||||||||
Sbjct: 757 aggccaccgccgacgagggggccgacccagtacaccca 720
Score = 42.1 bits (21), Expect = 1.4
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcggggttcatgga 410
|||||||||||||||| ||| |||||||||||
Sbjct: 692 ggcggggccgaaggagcgggccgggttcatgga 660
Score = 42.1 bits (21), Expect = 1.4
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcggggttca 406
|||| ||||||||| ||||||||||||||
Sbjct: 353 ggcgaggccgaaggtgacggcggggttca 325
>gb| AF057183.1 |AF057183 Zea mays putative tonoplast aquaporin mRNA, complete cds
Length = 1060
Score = 60.0 bits (30), Expect = 6e-06
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 313 aggccgccgccgatgagggggccgacccagtacaccca 350
||||| ||||||| ||||||||||||||||||||||||
Sbjct: 739 aggccaccgccgacgagggggccgacccagtacaccca 702
Score = 42.1 bits (21), Expect = 1.4
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcggggttcatgga 410
|||||||||||||||| ||| |||||||||||
Sbjct: 674 ggcggggccgaaggagcgggccgggttcatgga 642
Score = 42.1 bits (21), Expect = 1.4
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcggggttca 406
|||| ||||||||| ||||||||||||||
Sbjct: 335 ggcgaggccgaaggtgacggcggggttca 307
>gb| U43291.1 |MCU43291 Mesembryanthemum crystallinum tonoplast intrinsic protein (TIP)
mRNA, complete cds
Length = 1235
Score = 60.0 bits (30), Expect = 6e-06
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 298 tagatgacgccggcgaggccgccgccgatgagggggccgacccagtacacccactggt 355
|||||||| |||||||| || || |||||||| |||||||||||||| ||||| ||||
Sbjct: 752 tagatgactccggcgagccctcctccgatgagtgggccgacccagtagacccagtggt 695
>ref| NM_188505.1 | Oryza sativa (japonica cultivar-group), Ozsa8174 predicted mRNA
Length = 969
Score = 58.0 bits (29), Expect = 2e-05
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacacccactggt 355
|||||||||||| ||||||||| ||| |||| |||||||||||| ||||
Sbjct: 881 ccggcgaggccggcgccgatgaagggaccgagccagtacacccagtggt 833
>gb| AF521135.1 | Kandelia candel tonoplast intrinsic protein (TIP) mRNA, complete
cds
Length = 1099
Score = 58.0 bits (29), Expect = 2e-05
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 241 gcttagtagtcggtggtggggagctgctcgtgggtgc 277
||||||||||| | |||||||||||||||||||||||
Sbjct: 859 gcttagtagtcagcggtggggagctgctcgtgggtgc 823
>dbj| AP002094.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0483F08
Length = 148985
Score = 58.0 bits (29), Expect = 2e-05
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacacccactggt 355
|||||||||||| ||||||||| ||| |||| |||||||||||| ||||
Sbjct: 125093 ccggcgaggccggcgccgatgaagggaccgagccagtacacccagtggt 125141
>gb| AF254799.1 |AF254799 Hordeum vulgare tonoplast intrinsic protein 1 (TIP1), tonoplast
intrinsic protein 2 (TIP2), and Rar1 (Rar1) genes,
complete cds
Length = 65979
Score = 56.0 bits (28), Expect = 9e-05
Identities = 40/44 (90%)
Strand = Plus / Minus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacaccca 350
|||||||||||||| || ||||| || |||||||||||||||||
Sbjct: 44912 ccggcgaggccgccaccaatgagtggcccgacccagtacaccca 44869
>ref| NM_188624.1 | Oryza sativa (japonica cultivar-group), Ozsa8227 predicted mRNA
Length = 756
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 374 cgagggcggggccgaaggagacggcggggttcatggacgcgccggag 420
||||||| |||||||||||| ||| ||||||||||| |||||||||
Sbjct: 616 cgagggccgggccgaaggagcgggccgggttcatggaggcgccggag 570
>gb| BT016509.1 | Zea mays clone Contig342 mRNA sequence
Length = 1237
Score = 54.0 bits (27), Expect = 4e-04
Identities = 54/63 (85%)
Strand = Plus / Minus
Query: 293 gctcgtagatgacgccggcgaggccgccgccgatgagggggccgacccagtacacccact 352
||||||||| |||||||| ||||||| |||||| | ||| || |||||||||||||| |
Sbjct: 880 gctcgtagacgacgccggagaggccggcgccgaccatgggccccacccagtacacccatt 821
Query: 353 ggt 355
|||
Sbjct: 820 ggt 818
>gb| DQ226889.1 | Boechera divaricarpa isolate SLW-D-E07 mRNA sequence
Length = 980
Score = 54.0 bits (27), Expect = 4e-04
Identities = 90/111 (81%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtagatga 304
||||||||||||| |||||||| ||||||||| | ||||||| | |||||||||||
Sbjct: 767 agtagtcggtggttgggagctgttcgtgggtggtgttaatgaagaaaacctcgtagatga 708
Query: 305 cgccggcgaggccgccgccgatgagggggccgacccagtacacccactggt 355
||||||| || ||||||| ||| || ||| ||||||| ||||| ||||
Sbjct: 707 gtccggcgattccaccgccgacgagaggtccggcccagtagacccagtggt 657
>emb| X72581.1 |ATGTIPMR A.thaliana mRNA for tonoplast intrinsic protein gamma (gamma-TIP)
Length = 933
Score = 54.0 bits (27), Expect = 4e-04
Identities = 90/111 (81%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtagatga 304
||||||||||||| |||||||||||||| ||| | |||||||| | ||||||||||
Sbjct: 787 agtagtcggtggttgggagctgctcgtgtgtggtgttgatgaagaaaacttcgtagatga 728
Query: 305 cgccggcgaggccgccgccgatgagggggccgacccagtacacccactggt 355
|| |||| || ||||||| ||| || ||| ||||||||||||| ||||
Sbjct: 727 gtccagcgattccaccgccgacgagaggtccggcccagtacacccagtggt 677
>emb| AJ289866.2 |VVI289866 Vitis vinifera mRNA for putative aquaporin (delta-TIP gene)
Length = 1017
Score = 54.0 bits (27), Expect = 4e-04
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 369 gctgacgagggcggggccgaaggagacggcggggttcat 407
|||||||| |||||||||||||||| ||||||||||||
Sbjct: 624 gctgacgacggcggggccgaaggagcgggcggggttcat 586
>gb| AF271661.1 |AF271661 Vitis berlandieri x Vitis rupestris putative aquaporin TIP1 (TIP1)
mRNA, complete cds
Length = 1057
Score = 54.0 bits (27), Expect = 4e-04
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 369 gctgacgagggcggggccgaaggagacggcggggttcat 407
|||||||| |||||||||||||||| ||||||||||||
Sbjct: 666 gctgacgacggcggggccgaaggagcgggcggggttcat 628
>dbj| AP001550.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
clone:P0431F01
Length = 143209
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 374 cgagggcggggccgaaggagacggcggggttcatggacgcgccggag 420
||||||| |||||||||||| ||| ||||||||||| |||||||||
Sbjct: 98909 cgagggccgggccgaaggagcgggccgggttcatggaggcgccggag 98863
>dbj| AK069192.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023007E01, full
insert sequence
Length = 1112
Score = 54.0 bits (27), Expect = 4e-04
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 374 cgagggcggggccgaaggagacggcggggttcatggacgcgccggag 420
||||||| |||||||||||| ||| ||||||||||| |||||||||
Sbjct: 619 cgagggccgggccgaaggagcgggccgggttcatggaggcgccggag 573
>gb| AF367456.1 | Prunus persica clone gTip1 gamma-tonoplast intrinsic protein mRNA,
partial cds
Length = 408
Score = 50.1 bits (25), Expect = 0.006
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 366 ccagctgacgagggcggggccgaaggagacggcggggttcatgga 410
||||||||||| ||||| ||||||||||| || |||||||||||
Sbjct: 393 ccagctgacgacagcgggtccgaaggagactgccgggttcatgga 349
>ref| XM_473424.1 | Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 2307
Score = 48.1 bits (24), Expect = 0.023
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacaccca 350
||||| ||||| || ||||| || ||||||||||||||||||||
Sbjct: 686 ccggccaggccaccaccgatcagtgggccgacccagtacaccca 643
>emb| X95650.1 |TGTIP1GEN T.gesneriana mRNA for tonoplast intrinsic protein
Length = 992
Score = 48.1 bits (24), Expect = 0.023
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 319 ccgccgatgagggggccgacccagtacaccca 350
||||||||||| ||||| ||||||||||||||
Sbjct: 703 ccgccgatgagcgggccaacccagtacaccca 672
>emb| AL663000.4 |OSJN00201 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0034G17,
complete sequence
Length = 127259
Score = 48.1 bits (24), Expect = 0.023
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacaccca 350
||||| ||||| || ||||| || ||||||||||||||||||||
Sbjct: 92493 ccggccaggccaccaccgatcagtgggccgacccagtacaccca 92536
>gb| U92651.2 |BOU92651 Brassica oleracea var. botrytis tonoplast intrinsic protein
bobTIP26-1 mRNA, complete cds
Length = 942
Score = 48.1 bits (24), Expect = 0.023
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtgggtg 276
||||||||| |||||||||||| |||||||||
Sbjct: 790 agtagtcggcggtggggagctgttcgtgggtg 759
>dbj| AP008210.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
sequence
Length = 35498469
Score = 48.1 bits (24), Expect = 0.023
Identities = 39/44 (88%)
Strand = Plus / Plus
Query: 307 ccggcgaggccgccgccgatgagggggccgacccagtacaccca 350
||||| ||||| || ||||| || ||||||||||||||||||||
Sbjct: 27568517 ccggccaggccaccaccgatcagtgggccgacccagtacaccca 27568560
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 303 gacgccggcgaggccgccgccgatgagg 330
||||||| ||||||||||||||| ||||
Sbjct: 19492802 gacgccgacgaggccgccgccgaggagg 19492775
>gb| AF326509.1 |AF326509 Zea mays tonoplast membrane integral protein ZmTIP5-1 mRNA,
complete cds
Length = 1021
Score = 48.1 bits (24), Expect = 0.023
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 369 gctgacgagggcggggccgaaggagacggcggggttcatggacgcgcc 416
|||||||| ||| |||||||| ||| ||| |||||||||||||||||
Sbjct: 709 gctgacgacggccgggccgaacgagcgggccgggttcatggacgcgcc 662
>emb| X53040.1 |RNNIP26 R.norvegicus MIP-26 mRNA
Length = 336
Score = 46.1 bits (23), Expect = 0.091
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 313 aggccgccgccgatgagggggccgacccagtacacccactggt 355
||||| |||||||||| ||||| |||||||||||||| ||||
Sbjct: 301 aggcccccgccgatgattgggcccacccagtacacccagtggt 259
>emb| X53052.1 |RRMIP Rat partial mRNA for main intrinsic protein
Length = 936
Score = 46.1 bits (23), Expect = 0.091
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 313 aggccgccgccgatgagggggccgacccagtacacccactggt 355
||||| |||||||||| ||||| |||||||||||||| ||||
Sbjct: 635 aggcccccgccgatgattgggcccacccagtacacccagtggt 593
>emb| X12514.1 |RNMIP26R Rat mRNA fragment for main intrinsic protein 26 (MIP26)
Length = 543
Score = 46.1 bits (23), Expect = 0.091
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 313 aggccgccgccgatgagggggccgacccagtacacccactggt 355
||||| |||||||||| ||||| |||||||||||||| ||||
Sbjct: 242 aggcccccgccgatgattgggcccacccagtacacccagtggt 200
>gb| AY130971.1 | Brassica oleracea var. botrytis tonoplast intrinsic protein
bobTIP26-2 gene, complete cds
Length = 1442
Score = 46.1 bits (23), Expect = 0.091
Identities = 89/111 (80%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtagatga 304
|||||||||||||||||||||| || || ||| | |||||||| | |||||||||||
Sbjct: 1247 agtagtcggtggtggggagctgttcatgtgtggtgttgatgaagaaaacctcgtagatga 1188
Query: 305 cgccggcgaggccgccgccgatgagggggccgacccagtacacccactggt 355
||||||| || |||||||| || || || ||||||| ||||| ||||
Sbjct: 1187 gtccggcgactccaccgccgataagaggtccagcccagtagacccagtggt 1137
>emb| AJ251652.1 |MTR251652 Medicago truncatula mRNA for aquaporin (aqp1 gene)
Length = 1120
Score = 46.1 bits (23), Expect = 0.091
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 244 tagtagtcggtggtggggagctgctcgtgggtgcgggagatgaagag 290
|||||||| || || ||||||||||||||||||| | |||||||||
Sbjct: 837 tagtagtcagtagttgggagctgctcgtgggtgctgttgatgaagag 791
>gb| U92652.2 |BOU92652 Brassica oleracea var. botrytis tonoplast intrinsic protein
bobTIP26-2 mRNA, partial cds
Length = 599
Score = 46.1 bits (23), Expect = 0.091
Identities = 89/111 (80%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtagatga 304
|||||||||||||||||||||| || || ||| | |||||||| | |||||||||||
Sbjct: 526 agtagtcggtggtggggagctgttcatgtgtggtgttgatgaagaaaacctcgtagatga 467
Query: 305 cgccggcgaggccgccgccgatgagggggccgacccagtacacccactggt 355
||||||| || |||||||| || || || ||||||| ||||| ||||
Sbjct: 466 gtccggcgactccaccgccgataagaggtccagcccagtagacccagtggt 416
>gb| CP000250.1 | Rhodopseudomonas palustris HaA2, complete genome
Length = 5331656
Score = 46.1 bits (23), Expect = 0.091
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 306 gccggcgaggccgccgccgatga 328
|||||||||||||||||||||||
Sbjct: 3111631 gccggcgaggccgccgccgatga 3111609
Score = 40.1 bits (20), Expect = 5.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 305 cgccggcgaggccgccgccgatga 328
||||||||||||| ||||||||||
Sbjct: 505314 cgccggcgaggccaccgccgatga 505291
>gb| AF326505.1 |AF326505 Zea mays tonoplast membrane integral protein ZmTIP4-1 mRNA,
complete cds
Length = 1125
Score = 46.1 bits (23), Expect = 0.091
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 376 agggcggggccgaaggagacggcggggttcatggacgcgccgg 418
||||| |||||||||||| || |||||||||||||||||||
Sbjct: 768 agggccgggccgaaggagcgtgccgggttcatggacgcgccgg 726
>gb| AC020922.9 | Homo sapiens chromosome 19 clone CTD-2105E13, complete sequence
Length = 134793
Score = 46.1 bits (23), Expect = 0.091
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 213 cgggcgggcggggggcaggcggc 235
|||||||||||||||||||||||
Sbjct: 78789 cgggcgggcggggggcaggcggc 78811
>ref| XM_343137.2 | PREDICTED: Rattus norvegicus major intrinsic protein of eye lens
fiber (Mip), mRNA
Length = 2075
Score = 46.1 bits (23), Expect = 0.091
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 313 aggccgccgccgatgagggggccgacccagtacacccactggt 355
||||| |||||||||| ||||| |||||||||||||| ||||
Sbjct: 685 aggcccccgccgatgattgggcccacccagtacacccagtggt 643
>gb| AY207429.1 | Homo sapiens interleukin 11 (IL11) gene, complete cds
Length = 9803
Score = 46.1 bits (23), Expect = 0.091
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 213 cgggcgggcggggggcaggcggc 235
|||||||||||||||||||||||
Sbjct: 1449 cgggcgggcggggggcaggcggc 1427
>emb| AJ605573.1 | Ricinus communis mRNA for aquaporin (Tip1-1 gene), clone pT4L
Length = 1057
Score = 46.1 bits (23), Expect = 0.091
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 243 ttagtagtcggtggtggggagctgctcgtgggtgc 277
||||||||| ||||| ||||||||||| |||||||
Sbjct: 804 ttagtagtcagtggtagggagctgctcatgggtgc 770
>gb| AY112625.1 | Zea mays CL46210_1 mRNA sequence
Length = 479
Score = 46.1 bits (23), Expect = 0.091
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 293 gctcgtagatgacgccggcgaggccgccgccgatgagggggccgacccagtacacccact 352
||||| ||| |||||||| ||||||| |||||| | ||| || |||||||||||||| |
Sbjct: 279 gctcgaagacgacgccggagaggccggcgccgaccatgggccccacccagtacacccatt 338
Query: 353 ggt 355
|||
Sbjct: 339 ggt 341
>gb| AF000143.1 |HSAF000143 Human putative alternative lens membrane intrinsic protein (PALM)
mRNA, partial cds
Length = 789
Score = 46.1 bits (23), Expect = 0.091
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 313 aggccgccgccgatgagggggccgacccagtacacccactggt 355
||||| |||||||||| ||||| |||||||||||||| ||||
Sbjct: 641 aggcccccgccgatgattgggcccacccagtacacccagtggt 599
>gb| M81890.1 |HUMIL11A Human interleukin 11 (IL11) gene, complete mRNA
Length = 6870
Score = 46.1 bits (23), Expect = 0.091
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 213 cgggcgggcggggggcaggcggc 235
|||||||||||||||||||||||
Sbjct: 688 cgggcgggcggggggcaggcggc 666
>emb| AL591787.1 |SME591787 Sinorhizobium meliloti 1021 complete chromosome; segment 6/12
Length = 329100
Score = 44.1 bits (22), Expect = 0.36
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 307 ccggcgaggccgccgccgatga 328
||||||||||||||||||||||
Sbjct: 213784 ccggcgaggccgccgccgatga 213805
>ref| XM_851400.1 | PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
variant 11 (LOC479191), mRNA
Length = 4681
Score = 44.1 bits (22), Expect = 0.36
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcggggggcaggcggcgg 237
|||||||||||||| ||||||| || ||||||||
Sbjct: 124 acggacggacgggccggcggggcgcgggcggcgg 91
>ref| XM_536333.2 | PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
variant 1 (LOC479191), mRNA
Length = 4681
Score = 44.1 bits (22), Expect = 0.36
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcggggggcaggcggcgg 237
|||||||||||||| ||||||| || ||||||||
Sbjct: 124 acggacggacgggccggcggggcgcgggcggcgg 91
>ref| XM_851314.1 | PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
variant 10 (LOC479191), mRNA
Length = 4663
Score = 44.1 bits (22), Expect = 0.36
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcggggggcaggcggcgg 237
|||||||||||||| ||||||| || ||||||||
Sbjct: 124 acggacggacgggccggcggggcgcgggcggcgg 91
>ref| XM_851274.1 | PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
variant 9 (LOC479191), mRNA
Length = 4438
Score = 44.1 bits (22), Expect = 0.36
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcggggggcaggcggcgg 237
|||||||||||||| ||||||| || ||||||||
Sbjct: 124 acggacggacgggccggcggggcgcgggcggcgg 91
>ref| XM_851189.1 | PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
variant 7 (LOC479191), mRNA
Length = 4777
Score = 44.1 bits (22), Expect = 0.36
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcggggggcaggcggcgg 237
|||||||||||||| ||||||| || ||||||||
Sbjct: 124 acggacggacgggccggcggggcgcgggcggcgg 91
>ref| XM_851152.1 | PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
variant 6 (LOC479191), mRNA
Length = 4696
Score = 44.1 bits (22), Expect = 0.36
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcggggggcaggcggcgg 237
|||||||||||||| ||||||| || ||||||||
Sbjct: 124 acggacggacgggccggcggggcgcgggcggcgg 91
>ref| XM_851023.1 | PREDICTED: Canis familiaris similar to actinin, alpha 2, transcript
variant 3 (LOC479191), mRNA
Length = 4681
Score = 44.1 bits (22), Expect = 0.36
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcggggggcaggcggcgg 237
|||||||||||||| ||||||| || ||||||||
Sbjct: 124 acggacggacgggccggcggggcgcgggcggcgg 91
>dbj| AP008218.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
sequence
Length = 27566993
Score = 44.1 bits (22), Expect = 0.36
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcg 399
||||||||||||||||||||||
Sbjct: 8473737 ggcggggccgaaggagacggcg 8473716
Score = 44.1 bits (22), Expect = 0.36
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcg 399
||||||||||||||||||||||
Sbjct: 8461221 ggcggggccgaaggagacggcg 8461200
>gb| DP000011.1 | Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
Length = 27492551
Score = 44.1 bits (22), Expect = 0.36
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcg 399
||||||||||||||||||||||
Sbjct: 8473620 ggcggggccgaaggagacggcg 8473599
Score = 44.1 bits (22), Expect = 0.36
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcg 399
||||||||||||||||||||||
Sbjct: 8461104 ggcggggccgaaggagacggcg 8461083
>emb| AL928775.2 |CNS08CC5 Oryza sativa chromosome 12, . BAC OSJNBa0030N06 of library OSJNBa from
chromosome 12 of cultivar Nipponbare of ssp. japonica of
Oryza sativa (rice), complete sequence
Length = 146444
Score = 44.1 bits (22), Expect = 0.36
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcg 399
||||||||||||||||||||||
Sbjct: 80400 ggcggggccgaaggagacggcg 80379
Score = 44.1 bits (22), Expect = 0.36
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcg 399
||||||||||||||||||||||
Sbjct: 67884 ggcggggccgaaggagacggcg 67863
>gb| AE017351.1 | Cryptococcus neoformans var. neoformans JEC21 chromosome 11, complete
sequence
Length = 1019846
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 350 actggtacccccactcccagc 370
|||||||||||||||||||||
Sbjct: 290624 actggtacccccactcccagc 290604
>gb| AC154709.2 | Mus musculus BAC clone RP24-357I4 from chromosome 12, complete sequence
Length = 136354
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 94084 acggacggacgggcgggcggg 94104
>ref| XM_593064.2 | PREDICTED: Bos taurus similar to tumor protein p73 (LOC515105),
mRNA
Length = 2606
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 315 gccgccgccgatgagggggcc 335
|||||||||||||||||||||
Sbjct: 22 gccgccgccgatgagggggcc 42
>gb| AF183913.1 | Azospirillum brasilense major outer membrane protein OmaA precursor
(omaA) gene, complete cds
Length = 1435
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 307 ccggcgaggccgccgccgatg 327
|||||||||||||||||||||
Sbjct: 698 ccggcgaggccgccgccgatg 678
>ref| XM_856403.1 | PREDICTED: Canis familiaris similar to aquaporin 6, transcript
variant 2 (LOC607978), mRNA
Length = 1082
Score = 42.1 bits (21), Expect = 1.4
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcggggttcatgga 410
|||||||||||||||| ||| |||||||||||
Sbjct: 588 ggcggggccgaaggagcgggccgggttcatgga 556
>ref| XM_845359.1 | PREDICTED: Canis familiaris similar to aquaporin 6, transcript
variant 1 (LOC607978), mRNA
Length = 1067
Score = 42.1 bits (21), Expect = 1.4
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 378 ggcggggccgaaggagacggcggggttcatgga 410
|||||||||||||||| ||| |||||||||||
Sbjct: 573 ggcggggccgaaggagcgggccgggttcatgga 541
>emb| CT025679.5 | Mouse DNA sequence from clone RP24-296K22 on chromosome 14, complete
sequence
Length = 160805
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 155955 acggacggacgggcgggcggg 155935
>ref| XM_567655.1 | Cryptococcus neoformans var. neoformans JEC21 hypothetical protein
(CNK00920) partial mRNA
Length = 2340
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 350 actggtacccccactcccagc 370
|||||||||||||||||||||
Sbjct: 2133 actggtacccccactcccagc 2113
>gb| AC123532.4 | Mus musculus chromosome 14 clone RP23-84B6, complete sequence
Length = 166421
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 7846 acggacggacgggcgggcggg 7826
>gb| AC098877.3 | Mus musculus BAC clone RP23-2C24 from 14, complete sequence
Length = 240151
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 37973 acggacggacgggcgggcggg 37953
>gb| AC104099.5 | Mus musculus BAC clone RP24-372J8 from 3, complete sequence
Length = 148259
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 37509 acggacggacgggcgggcggg 37489
Score = 40.1 bits (20), Expect = 5.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 201 cacacggacggacgggcgggcggg 224
||||||||||||||| ||||||||
Sbjct: 37516 cacacggacggacggacgggcggg 37493
>gb| BC012214.1 | Mus musculus Rab geranylgeranyl transferase, a subunit, mRNA (cDNA
clone MGC:19255 IMAGE:3967218), complete cds
Length = 2176
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 23 acggacggacgggcgggcggg 43
>gb| AY258323.1 | Rubella virus strain BRD-II, complete genome
Length = 9778
Score = 42.1 bits (21), Expect = 1.4
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 213 cgggcgggcggggggcaggcggcgg 237
||||||||| |||||||||||||||
Sbjct: 2327 cgggcgggctgggggcaggcggcgg 2303
>ref| NM_019519.1 | Mus musculus Rab geranylgeranyl transferase, a subunit (Rabggta),
mRNA
Length = 2547
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 18 acggacggacgggcgggcggg 38
>ref| XM_961391.1 | PREDICTED: Tribolium castaneum similar to CG31000-PC, isoform C
(LOC654951), mRNA
Length = 3244
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 305 cgccggcgaggccgccgccga 325
|||||||||||||||||||||
Sbjct: 1642 cgccggcgaggccgccgccga 1622
>gb| CP000089.1 | Dechloromonas aromatica RCB, complete genome
Length = 4501104
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 309 ggcgaggccgccgccgatgag 329
|||||||||||||||||||||
Sbjct: 1201038 ggcgaggccgccgccgatgag 1201058
>emb| AL390091.1 |NCB12F1 Neurospora crassa DNA linkage group II BAC clone B12F1
Length = 68478
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 42894 acggacggacgggcgggcggg 42914
Score = 40.1 bits (20), Expect = 5.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 201 cacacggacggacgggcgggcggg 224
||||||||||||||| ||||||||
Sbjct: 42887 cacacggacggacggacgggcggg 42910
>emb| AJ489613.1 |CAR489613 Cicer arietinum partial mRNA for tonoplast intrinsic protein (tip
gene)
Length = 716
Score = 42.1 bits (21), Expect = 1.4
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 244 tagtagtcggtggtggggagctgctcgtgggtg 276
|||||||| ||||| ||||| ||||||||||||
Sbjct: 428 tagtagtcagtggtagggagttgctcgtgggtg 396
>emb| BX470185.18 | Zebrafish DNA sequence from clone CH211-222D3 in linkage group 3,
complete sequence
Length = 198900
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 27616 acggacggacgggcgggcggg 27596
>dbj| AK146917.1 | Mus musculus 17 days embryo kidney cDNA, RIKEN full-length enriched
library, clone:I920074L06 product:Rab geranylgeranyl
transferase, a subunit, full insert sequence
Length = 2422
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 41 acggacggacgggcgggcggg 61
>gb| AC135495.2 | Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1664B11,
complete sequence
Length = 126040
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 56775 acggacggacgggcgggcggg 56755
>ref| NM_214226.1 | Sus scrofa inositol(1,3,4,5)tetrakisphosphate receptor (CENTA1),
mRNA
Length = 1544
Score = 42.1 bits (21), Expect = 1.4
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 205 cggacggacgggcgggcggggggca 229
|||||||||||||||||||| ||||
Sbjct: 56 cggacggacgggcgggcgggcggca 80
>gb| AE004658.1 | Pseudomonas aeruginosa PAO1, section 219 of 529 of the complete
genome
Length = 11864
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 305 cgccggcgaggccgccgccga 325
|||||||||||||||||||||
Sbjct: 2650 cgccggcgaggccgccgccga 2630
>gb| AF275315.1 |AF275315 Lotus japonicus water-selective transport intrinsic membrane
protein 1 mRNA, complete cds
Length = 1162
Score = 42.1 bits (21), Expect = 1.4
Identities = 39/45 (86%)
Strand = Plus / Minus
Query: 366 ccagctgacgagggcggggccgaaggagacggcggggttcatgga 410
|||||| |||| ||| || ||||| || |||||||||||||||||
Sbjct: 689 ccagctcacgacggctggtccgaatgacacggcggggttcatgga 645
>gb| AF127662.1 |AF127662 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase
alpha subunit (Rabggta) mRNA, complete cds,
alternatively spliced
Length = 2466
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 18 acggacggacgggcgggcggg 38
>gb| AF127661.1 |AF127661 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase
alpha subunit (Rabggta) pseudogene, complete sequence
Length = 2435
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 18 acggacggacgggcgggcggg 38
>gb| AF127660.1 |AF127660 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha
subunit (Rabggta) mRNA, complete cds, alternatively
spliced
Length = 2492
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 18 acggacggacgggcgggcggg 38
>gb| AF127659.1 |AF127659 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase
alpha subunit (Rabggta) mRNA, complete cds,
alternatively spliced
Length = 2547
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 18 acggacggacgggcgggcggg 38
>gb| AF127658.1 |AF127658 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha
subunit (Rabggta) mRNA, complete cds, alternatively
spliced
Length = 2547
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 18 acggacggacgggcgggcggg 38
>gb| AF127657.1 |AF127657 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase
alpha subunit (Rabggta) pseudogene, complete sequence
Length = 2338
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 18 acggacggacgggcgggcggg 38
>gb| AF127656.1 |AF127656 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha
subunit (Rabggta) mRNA, complete cds, alternatively
spliced
Length = 2395
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 18 acggacggacgggcgggcggg 38
>gb| AF127655.1 |AF127655 Mus musculus strain C57BL/6J-gm/gm RAB geranylgeranyl transferase
alpha subunit (Rabggta) gene, complete cds,
alternatively spliced
Length = 2685
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 18 acggacggacgggcgggcggg 38
>gb| AF127654.1 |AF127654 Mus musculus strain C57BL/6J RAB geranylgeranyl transferase alpha
subunit (Rabggta) gene, complete cds, alternatively
spliced
Length = 2685
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 18 acggacggacgggcgggcggg 38
>gb| AY596297.1 | Haloarcula marismortui ATCC 43049 chromosome I, complete sequence
Length = 3131724
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 305 cgccggcgaggccgccgccga 325
|||||||||||||||||||||
Sbjct: 2570348 cgccggcgaggccgccgccga 2570368
Score = 40.1 bits (20), Expect = 5.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 305 cgccggcgaggccgccgccgatga 328
||||||| ||||||||||||||||
Sbjct: 2369100 cgccggccaggccgccgccgatga 2369077
>emb| AL646052.1 | Ralstonia solanacearum GMI1000 chromosome complete sequence
Length = 3716413
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 305 cgccggcgaggccgccgccga 325
|||||||||||||||||||||
Sbjct: 1841115 cgccggcgaggccgccgccga 1841095
>emb| AL845372.6 | Zebrafish DNA sequence from clone DKEYP-113C1 in linkage group 20,
complete sequence
Length = 80017
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 44968 acggacggacgggcgggcggg 44988
>emb| CR381567.9 | Zebrafish DNA sequence from clone DKEY-115O4 in linkage group 23,
complete sequence
Length = 142417
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 45131 acggacggacgggcgggcggg 45151
>gb| AF026470.1 |AF026470 Pseudomonas aeruginosa gluconate repressor (gnuR), gluconate kinase
(gnuK), and gluconate permease (gnuT) genes, complete
cds
Length = 3554
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 305 cgccggcgaggccgccgccga 325
|||||||||||||||||||||
Sbjct: 427 cgccggcgaggccgccgccga 407
>gb| AC159324.2 | Mus musculus BAC clone RP23-9D1 from chromosome 12, complete sequence
Length = 207280
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 13760 acggacggacgggcgggcggg 13780
>gb| CP000085.1 | Burkholderia thailandensis E264 chromosome II, complete sequence
Length = 2914771
Score = 42.1 bits (21), Expect = 1.4
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 215 ggcgggcggggggcaggcggcggtg 239
||||||||||||||| |||||||||
Sbjct: 2074504 ggcgggcggggggcatgcggcggtg 2074480
>emb| CR974568.14 | Mouse DNA sequence from clone RP23-39N20 on chromosome 12, complete
sequence
Length = 251037
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 108741 acggacggacgggcgggcggg 108721
>emb| CR388420.19 | Zebrafish DNA sequence from clone DKEY-37H18 in linkage group 13,
complete sequence
Length = 121689
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 73151 acggacggacgggcgggcggg 73131
>gb| U88368.1 |SSU88368 Sus scrofa inositol(1,3,4,5)tetrakisphosphate receptor mRNA,
complete cds
Length = 1544
Score = 42.1 bits (21), Expect = 1.4
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 205 cggacggacgggcgggcggggggca 229
|||||||||||||||||||| ||||
Sbjct: 56 cggacggacgggcgggcgggcggca 80
>dbj| AP004479.1 | Lotus japonicus genomic DNA, chromosome 1, clone:LjT03H13, TM0012b,
complete sequence
Length = 41820
Score = 42.1 bits (21), Expect = 1.4
Identities = 39/45 (86%)
Strand = Plus / Plus
Query: 366 ccagctgacgagggcggggccgaaggagacggcggggttcatgga 410
|||||| |||| ||| || ||||| || |||||||||||||||||
Sbjct: 10107 ccagctcacgacggctggtccgaatgacacggcggggttcatgga 10151
>gb| L07320.1 |HS5E1A Murine cytomegalovirus e1 protein gene, complete cds
Length = 4536
Score = 42.1 bits (21), Expect = 1.4
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcggg 224
|||||||||||||||||||||
Sbjct: 745 acggacggacgggcgggcggg 765
>dbj| AB048248.1 | Pyrus communis Py-gTIP mRNA for gamma tonoplast intrinsic protein,
complete cds
Length = 1122
Score = 42.1 bits (21), Expect = 1.4
Identities = 95/120 (79%)
Strand = Plus / Minus
Query: 294 ctcgtagatgacgccggcgaggccgccgccgatgagggggccgacccagtacacccactg 353
||||||||||| |||||||| ||| ||||||| | || ||| ||||||| ||||| ||
Sbjct: 776 ctcgtagatgagcccggcgagcccggcgccgatcaaaggcccggcccagtagacccagtg 717
Query: 354 gtacccccactcccagctgacgagggcggggccgaaggagacggcggggttcatggacgc 413
|| | |||| |||||| || | || || ||||| || ||||| ||||||||||||||
Sbjct: 716 gttctcccagctccagctcaccaacgccggcccgaangaaacggccgggttcatggacgc 657
>ref| NM_129238.2 | Arabidopsis thaliana GAMMA-TIP; water channel AT2G36830 (GAMMA-TIP)
mRNA, complete cds
Length = 1058
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtg 272
||||||| ||||| ||||||||||||||
Sbjct: 818 agtagtctgtggttgggagctgctcgtg 791
>gb| AC164878.2 | Mus musculus BAC clone RP23-364G24 from chromosome 13, complete
sequence
Length = 181893
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcgg 223
||||||||||||||||||||
Sbjct: 94623 acggacggacgggcgggcgg 94642
>gb| AC162034.6 | Mus musculus chromosome 7, clone RP23-285B12, complete sequence
Length = 197907
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 213 cgggcgggcggggggcaggc 232
||||||||||||||||||||
Sbjct: 122681 cgggcgggcggggggcaggc 122700
>gb| CP000096.1 | Pelodictyon luteolum DSM 273, complete genome
Length = 2364842
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 318 gccgccgatgagggggccga 337
||||||||||||||||||||
Sbjct: 1305526 gccgccgatgagggggccga 1305507
>gb| DQ215783.1 | Taeniopygia guttata clone 0058P0012B09 proteasome alpha 1 subunit
variant 1-like mRNA, complete sequence
Length = 1190
Score = 40.1 bits (20), Expect = 5.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 213 cgggcgggcggggggcaggcggcg 236
||||||||||| ||||||||||||
Sbjct: 38 cgggcgggcggcgggcaggcggcg 15
>gb| CP000152.1 | Burkholderia sp. 383 chromosome 2, complete sequence
Length = 3587082
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 306 gccggcgaggccgccgccga 325
||||||||||||||||||||
Sbjct: 412353 gccggcgaggccgccgccga 412372
>ref| XM_472326.1 | Oryza sativa (japonica cultivar-group), predicted mRNA
Length = 618
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 303 gacgccggcgaggccgccgccgatgagg 330
||||||| ||||||||||||||| ||||
Sbjct: 133 gacgccgacgaggccgccgccgaggagg 160
>gb| AF474373.1 | Hordeum vulgare subsp. vulgare BAC 259I16, complete sequence
Length = 124050
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcgg 223
||||||||||||||||||||
Sbjct: 72221 acggacggacgggcgggcgg 72202
>ref| NM_001025266.1 | Homo sapiens hypothetical gene supported by AK091454 (LOC285382),
mRNA
Length = 5901
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 303 gacgccggcgaggccgccgc 322
||||||||||||||||||||
Sbjct: 217 gacgccggcgaggccgccgc 198
>gb| CP000143.1 | Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
Length = 3188609
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 308 cggcgaggccgccgccgatg 327
||||||||||||||||||||
Sbjct: 622954 cggcgaggccgccgccgatg 622973
>gb| AC145321.3 | Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBa0094P07, complete sequence
Length = 162311
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 305 cgccggcgaggccgccgccg 324
||||||||||||||||||||
Sbjct: 15954 cgccggcgaggccgccgccg 15935
>gb| CP000010.1 | Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
Length = 3510148
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 306 gccggcgaggccgccgccga 325
||||||||||||||||||||
Sbjct: 1776040 gccggcgaggccgccgccga 1776021
>ref| XM_414866.1 | PREDICTED: Gallus gallus similar to Aquaporin 8 (LOC416566), mRNA
Length = 1761
Score = 40.1 bits (20), Expect = 5.6
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 321 gccgatgagggggccgacccagtacacccactggta 356
|||||| || || ||||||||||||||||| |||||
Sbjct: 1371 gccgatcagaggcccgacccagtacacccagtggta 1336
>ref| XM_426181.1 | PREDICTED: Gallus gallus similar to Brix domain containing protein 1
(LOC428624), mRNA
Length = 1530
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 305 cgccggcgaggccgccgccg 324
||||||||||||||||||||
Sbjct: 1364 cgccggcgaggccgccgccg 1345
>gb| AY581827.1 | Cynodon dactylon NOD26-like membrane integral protein-like mRNA,
partial sequence
Length = 555
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 393 gacggcggggttcatggacgcgccggag 420
|||||||||||||||| ||||||||||
Sbjct: 425 gacggcggggttcatgtgcgcgccggag 398
>gb| CP000285.1 | Chromohalobacter salexigens DSM 3043, complete genome
Length = 3696649
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 308 cggcgaggccgccgccgatg 327
||||||||||||||||||||
Sbjct: 49687 cggcgaggccgccgccgatg 49668
>gb| CP000124.1 | Burkholderia pseudomallei 1710b chromosome I, complete sequence
Length = 4126292
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 306 gccggcgaggccgccgccga 325
||||||||||||||||||||
Sbjct: 3021559 gccggcgaggccgccgccga 3021540
>gb| DQ356948.1 | Crocodilepox virus, complete genome
Length = 190054
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 305 cgccggcgaggccgccgccg 324
||||||||||||||||||||
Sbjct: 101116 cgccggcgaggccgccgccg 101135
>gb| AY502065.1 | Streptomyces mobaraensis transglutaminase gene, complete cds
Length = 1224
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 306 gccggcgaggccgccgccga 325
||||||||||||||||||||
Sbjct: 76 gccggcgaggccgccgccga 95
>gb| AF531437.1 | Streptomyces mobaraensis IFO13819 transglutaminase precursor, gene,
complete cds
Length = 1809
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 306 gccggcgaggccgccgccga 325
||||||||||||||||||||
Sbjct: 653 gccggcgaggccgccgccga 672
>emb| CR847515.10 | Zebrafish DNA sequence from clone DKEYP-60A7 in linkage group 9, complete
sequence
Length = 153947
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 138 attcattcattcaaagcaaa 157
||||||||||||||||||||
Sbjct: 143356 attcattcattcaaagcaaa 143337
>gb| AC012596.4 | Homo sapiens BAC clone CTD-2523K17 from 7, complete sequence
Length = 154859
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 133 gatggattcattcattcaaa 152
||||||||||||||||||||
Sbjct: 68036 gatggattcattcattcaaa 68017
>gb| AY225468.1 | Mus musculus interleukin 11 gene, promoter region and partial 5'UTR
Length = 3811
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 213 cgggcgggcggggggcaggc 232
||||||||||||||||||||
Sbjct: 3619 cgggcgggcggggggcaggc 3600
>emb| AL161740.16 | Human DNA sequence from clone RP6-239D12 on chromosome 1p32.1-33
Contains 3' end of the DAB1 gene for disabled homolog 1
(Drosophila), a novel gene and the 5' end of a novel gene,
complete sequence
Length = 60856
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 133 gatggattcattcattcaaa 152
||||||||||||||||||||
Sbjct: 53885 gatggattcattcattcaaa 53904
>gb| AC123518.2 | Oryza sativa (japonica cultivar-group) chromosome 11 clone
OSJNBb0088N01, complete sequence
Length = 123954
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 305 cgccggcgaggccgccgccg 324
||||||||||||||||||||
Sbjct: 68770 cgccggcgaggccgccgccg 68751
>emb| X63552.1 |ATGTIPARA A.thaliana gene for tonoplast intrinsic protein gamma-TIP(Ara)
Length = 1398
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtg 272
||||||| ||||| ||||||||||||||
Sbjct: 1203 agtagtctgtggttgggagctgctcgtg 1176
>gb| AY059134.1 | Arabidopsis thaliana putative aquaporin (At2g36830) mRNA, complete
cds
Length = 787
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtg 272
||||||| ||||| ||||||||||||||
Sbjct: 754 agtagtctgtggttgggagctgctcgtg 727
>gb| AF370172.1 | Arabidopsis thaliana putative tonoplast intrinsic protein gamma,
aquaporin (At2g36830) mRNA, complete cds
Length = 1030
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtg 272
||||||| ||||| ||||||||||||||
Sbjct: 812 agtagtctgtggttgggagctgctcgtg 785
>gb| AF486513.1 | Hordeum vulgare cultivar Yon M Kei GBSSI gene, promoter and 5'
untranslated region
Length = 1201
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcgg 223
||||||||||||||||||||
Sbjct: 883 acggacggacgggcgggcgg 864
>gb| AF486512.1 | Hordeum vulgare cultivar CDC Alamo GBSSI gene, promoter and 5'
untranslated region
Length = 1197
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcgg 223
||||||||||||||||||||
Sbjct: 884 acggacggacgggcgggcgg 865
>gb| AF486508.1 | Hordeum vulgare cultivar Oderbrucker GBSSI gene, promoter and 5'
untranslated region
Length = 1195
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcgg 223
||||||||||||||||||||
Sbjct: 882 acggacggacgggcgggcgg 863
>emb| BX571965.1 | Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
Length = 4074542
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 306 gccggcgaggccgccgccga 325
||||||||||||||||||||
Sbjct: 2751481 gccggcgaggccgccgccga 2751462
>emb| AJ314583.1 |POC314583 Posidonia oceanica mRNA for putative tonoplast intrinsic protein
(tip1 gene)
Length = 1112
Score = 40.1 bits (20), Expect = 5.6
Identities = 80/100 (80%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtgggtgcgggagatgaagagcagctcgtagatga 304
||||||| ||||| |||||||| || |||||| || |||||| | ||||| ||||| ||
Sbjct: 830 agtagtcagtggttgggagctgttcatgggtgtggttgatgaataacagctggtagacga 771
Query: 305 cgccggcgaggccgccgccgatgagggggccgacccagta 344
|||||||| | | | |||| || ||||||||||||||
Sbjct: 770 tgccggcgatggctgcaccgactagtgggccgacccagta 731
>emb| BX897736.7 | Zebrafish DNA sequence from clone CH211-181B15 in linkage group 17,
complete sequence
Length = 141987
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 131 gggatggattcattcattca 150
||||||||||||||||||||
Sbjct: 10001 gggatggattcattcattca 10020
>gb| CP000301.1 | Rhodopseudomonas palustris BisB18, complete genome
Length = 5513844
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 306 gccggcgaggccgccgccga 325
||||||||||||||||||||
Sbjct: 3009661 gccggcgaggccgccgccga 3009642
>gb| AC023310.4 | Homo sapiens chromosome 15, clone RP11-336L20, complete sequence
Length = 177355
Score = 40.1 bits (20), Expect = 5.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 128 aatgggatggattcattcattcaa 151
|||||||| |||||||||||||||
Sbjct: 47407 aatgggattgattcattcattcaa 47384
>dbj| AK091454.1 | Homo sapiens cDNA FLJ34135 fis, clone FCBBF3010695
Length = 2613
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 303 gacgccggcgaggccgccgc 322
||||||||||||||||||||
Sbjct: 217 gacgccggcgaggccgccgc 198
>tpg| BK001890.1 | TPA: TPA_inf: Drosophila melanogaster HDC08154 (HDC08154) gene,
complete cds
Length = 1399
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcgg 223
||||||||||||||||||||
Sbjct: 1381 acggacggacgggcgggcgg 1362
>gb| CP000133.1 | Rhizobium etli CFN 42, complete genome
Length = 4381608
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 305 cgccggcgaggccgccgccg 324
||||||||||||||||||||
Sbjct: 76092 cgccggcgaggccgccgccg 76111
>gb| CP000136.1 | Rhizobium etli CFN 42 plasmid p42c, complete sequence
Length = 250948
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 308 cggcgaggccgccgccgatg 327
||||||||||||||||||||
Sbjct: 121334 cggcgaggccgccgccgatg 121315
>dbj| AP007255.1 | Magnetospirillum magneticum AMB-1 DNA, complete genome
Length = 4967148
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 305 cgccggcgaggccgccgccg 324
||||||||||||||||||||
Sbjct: 3338605 cgccggcgaggccgccgccg 3338586
>gb| AC006922.7 | Arabidopsis thaliana chromosome 2 clone T1J8 map g6825, complete
sequence
Length = 134151
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtg 272
||||||| ||||| ||||||||||||||
Sbjct: 7513 agtagtctgtggttgggagctgctcgtg 7486
>dbj| AB118808.1 | Hordeum vulgare subsp. spontaneum GBSSI gene for granule bound
starch synthase I, complete cds, strain:OUH643
Length = 5119
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcgg 223
||||||||||||||||||||
Sbjct: 797 acggacggacgggcgggcgg 778
>dbj| AB089162.1 | Hordeum vulgare subsp. vulgare GBSSI gene for granule bound starch
synthase I
Length = 5190
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcgg 223
||||||||||||||||||||
Sbjct: 822 acggacggacgggcgggcgg 803
>dbj| AB088761.1 | Hordeum vulgare subsp. vulgare GBSSI gene for granule bound starch
synthase I, complete cds
Length = 5190
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcgg 223
||||||||||||||||||||
Sbjct: 822 acggacggacgggcgggcgg 803
>gb| AC100757.2 | Homo sapiens chromosome 15, clone RP11-566K19, complete sequence
Length = 171987
Score = 40.1 bits (20), Expect = 5.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 128 aatgggatggattcattcattcaa 151
|||||||| |||||||||||||||
Sbjct: 31404 aatgggattgattcattcattcaa 31381
>gb| AC107487.1 | Drosophila melanogaster 3L BAC RP98-10D20 (Roswell Park Cancer
Institute Drosophila BAC Library) complete sequence
Length = 170900
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcgg 223
||||||||||||||||||||
Sbjct: 32025 acggacggacgggcgggcgg 32006
>gb| DQ317109.1 | Drosophila pseudoobscura Dscam gene, exons 3 through 24
Length = 53864
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 308 cggcgaggccgccgccgatg 327
||||||||||||||||||||
Sbjct: 28501 cggcgaggccgccgccgatg 28520
>emb| BX548249.13 | Zebrafish DNA sequence from clone CH211-93A2 in linkage group 21,
complete sequence
Length = 153142
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcgg 223
||||||||||||||||||||
Sbjct: 66723 acggacggacgggcgggcgg 66704
>emb| BX119977.10 | Zebrafish DNA sequence from clone CH211-198A3 in linkage group 7,
complete sequence
Length = 182186
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcgg 223
||||||||||||||||||||
Sbjct: 16609 acggacggacgggcgggcgg 16590
>dbj| AP008217.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
sequence
Length = 28386948
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 305 cgccggcgaggccgccgccg 324
||||||||||||||||||||
Sbjct: 5281445 cgccggcgaggccgccgccg 5281464
>dbj| AP008215.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
sequence
Length = 22696651
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 305 cgccggcgaggccgccgccg 324
||||||||||||||||||||
Sbjct: 20970315 cgccggcgaggccgccgccg 20970296
>gb| AF342810.1 |AF342810 Zea mays NOD26-like membrane integral protein ZmNIP2-3 mRNA,
complete cds
Length = 1300
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 393 gacggcggggttcatggacgcgccggag 420
|||||||||||||||| ||||||||||
Sbjct: 442 gacggcggggttcatgtgcgcgccggag 415
>gb| AF326485.1 |AF326485 Zea mays NOD26-like membrane integral protein ZmNIP2-2 mRNA,
complete cds
Length = 1387
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 393 gacggcggggttcatggacgcgccggag 420
|||||||||||||||| ||||||||||
Sbjct: 452 gacggcggggttcatgtgcgcgccggag 425
>emb| AL662997.3 |OSJN00205 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0039F02,
complete sequence
Length = 122499
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 303 gacgccggcgaggccgccgccgatgagg 330
||||||| ||||||||||||||| ||||
Sbjct: 13449 gacgccgacgaggccgccgccgaggagg 13422
>emb| BX819301.1 |CNS0AA93 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB66ZE04 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 996
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtg 272
||||||| ||||| ||||||||||||||
Sbjct: 793 agtagtctgtggttgggagctgctcgtg 766
>emb| BX819122.1 |CNS0AA8S Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB49ZC08 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 929
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtg 272
||||||| ||||| ||||||||||||||
Sbjct: 797 agtagtctgtggttgggagctgctcgtg 770
>emb| BX819066.1 |CNS0AA99 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB42ZA01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 1009
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtg 272
||||||| ||||| ||||||||||||||
Sbjct: 783 agtagtctgtggttgggagctgctcgtg 756
>emb| BX818765.1 |CNS0AA8G Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB10ZD11 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 950
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtg 272
||||||| ||||| ||||||||||||||
Sbjct: 798 agtagtctgtggttgggagctgctcgtg 771
>emb| BX819619.1 |CNS0A8TV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB95ZA10 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 885
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtg 272
||||||| ||||| ||||||||||||||
Sbjct: 799 agtagtctgtggttgggagctgctcgtg 772
>emb| BX819585.1 |CNS0A8ZS Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB91ZD10 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 975
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtg 272
||||||| ||||| ||||||||||||||
Sbjct: 799 agtagtctgtggttgggagctgctcgtg 772
>emb| BX819242.1 |CNS0A8YI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB5ZD01 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 904
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtg 272
||||||| ||||| ||||||||||||||
Sbjct: 797 agtagtctgtggttgggagctgctcgtg 770
>emb| BX818836.1 |CNS0A8V6 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB18ZB03 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 995
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtg 272
||||||| ||||| ||||||||||||||
Sbjct: 798 agtagtctgtggttgggagctgctcgtg 771
>emb| BX818785.1 |CNS0A8WQ Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTFB13ZC03 of Flowers and buds of strain col-0 of
Arabidopsis thaliana (thale cress)
Length = 973
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtg 272
||||||| ||||| ||||||||||||||
Sbjct: 797 agtagtctgtggttgggagctgctcgtg 770
>emb| BX820166.1 |CNS0A8IR Arabidopsis thaliana Full-length cDNA Complete sequence from clone
GSLTLS84ZH08 of Adult vegetative tissue of strain col-0
of Arabidopsis thaliana (thale cress)
Length = 961
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtg 272
||||||| ||||| ||||||||||||||
Sbjct: 789 agtagtctgtggttgggagctgctcgtg 762
>gb| AF022186.2 |AF022186 Cyanidium caldarium strain RK1 chloroplast, complete genome
Length = 164921
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 11 aactgaacttgaaattactc 30
||||||||||||||||||||
Sbjct: 98129 aactgaacttgaaattactc 98148
>gb| AY087558.1 | Arabidopsis thaliana clone 36633 mRNA, complete sequence
Length = 1042
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 245 agtagtcggtggtggggagctgctcgtg 272
||||||| ||||| ||||||||||||||
Sbjct: 818 agtagtctgtggttgggagctgctcgtg 791
>gb| CP000157.1 | Erythrobacter litoralis HTCC2594, complete genome
Length = 3052398
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 307 ccggcgaggccgccgccgat 326
||||||||||||||||||||
Sbjct: 1321538 ccggcgaggccgccgccgat 1321519
>gb| AC136687.6 | Homo sapiens chromosome 15, clone RP11-439M15, complete sequence
Length = 180708
Score = 40.1 bits (20), Expect = 5.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 128 aatgggatggattcattcattcaa 151
|||||||| |||||||||||||||
Sbjct: 146597 aatgggattgattcattcattcaa 146620
>gb| AC134393.6 | Homo sapiens chromosome 15, clone CTC-803A3, complete sequence
Length = 132353
Score = 40.1 bits (20), Expect = 5.6
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 128 aatgggatggattcattcattcaa 151
|||||||| |||||||||||||||
Sbjct: 74998 aatgggattgattcattcattcaa 74975
>gb| AC131280.9 | Homo sapiens chromosome 15, clone RP11-467L19, complete sequence
Length = 194754
Score = 40.1 bits (20), Expect = 5.6
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 128 aatgggatggattcattcattcaa 151
|||||||| |||||||||||||||
Sbjct: 116188 aatgggattgattcattcattcaa 116211
>dbj| AP006149.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
clone:B1274F11
Length = 171257
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 305 cgccggcgaggccgccgccg 324
||||||||||||||||||||
Sbjct: 62404 cgccggcgaggccgccgccg 62385
>dbj| AB154356.1 | Hordeum vulgare subsp. spontaneum GBSSI gene for granule bound
starch synthase I, complete cds
Length = 4535
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcgg 223
||||||||||||||||||||
Sbjct: 400 acggacggacgggcgggcgg 381
>dbj| AB118809.1 | Hordeum vulgare subsp. spontaneum GBSSI gene for granule bound
starch synthase I, complete cds, strain:OUH602
Length = 5190
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcgg 223
||||||||||||||||||||
Sbjct: 822 acggacggacgggcgggcgg 803
>dbj| AK112006.1 | Oryza sativa (japonica cultivar-group) cDNA clone:006-205-B09, full
insert sequence
Length = 1300
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 305 cgccggcgaggccgccgccg 324
||||||||||||||||||||
Sbjct: 495 cgccggcgaggccgccgccg 514
>dbj| AK111927.1 | Oryza sativa (japonica cultivar-group) cDNA clone:001-015-C10, full
insert sequence
Length = 1463
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 305 cgccggcgaggccgccgccg 324
||||||||||||||||||||
Sbjct: 519 cgccggcgaggccgccgccg 538
>emb| X07932.1 |HVWAXYR Barley mRNA pcwx27 for waxy locus
Length = 2311
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcgg 223
||||||||||||||||||||
Sbjct: 133 acggacggacgggcgggcgg 114
>emb| X07931.1 |HVWAXYG Barley DNA for waxy locus encoding starch synthase (EC 2.4.1.11)
Length = 5153
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcgg 223
||||||||||||||||||||
Sbjct: 938 acggacggacgggcgggcgg 919
>gb| AC007934.7 |AC007934 Homo sapiens, clone RP11-29A1, complete sequence
Length = 157625
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 303 gacgccggcgaggccgccgc 322
||||||||||||||||||||
Sbjct: 116714 gacgccggcgaggccgccgc 116695
>dbj| AK100873.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023126C15, full
insert sequence
Length = 1535
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 305 cgccggcgaggccgccgccg 324
||||||||||||||||||||
Sbjct: 110 cgccggcgaggccgccgccg 91
>dbj| AK069688.1 | Oryza sativa (japonica cultivar-group) cDNA clone:J023034A08, full
insert sequence
Length = 1493
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 305 cgccggcgaggccgccgccg 324
||||||||||||||||||||
Sbjct: 85 cgccggcgaggccgccgccg 66
>emb| AL929340.4 | Zebrafish DNA sequence from clone CH211-248N16 in linkage group 20,
complete sequence
Length = 163231
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcgg 223
||||||||||||||||||||
Sbjct: 60247 acggacggacgggcgggcgg 60266
>gb| AY109651.1 | Zea mays CL6730_1 mRNA sequence
Length = 899
Score = 40.1 bits (20), Expect = 5.6
Identities = 26/28 (92%)
Strand = Plus / Minus
Query: 393 gacggcggggttcatggacgcgccggag 420
|||||||||||||||| ||||||||||
Sbjct: 430 gacggcggggttcatgtgcgcgccggag 403
>gb| AC006947.2 |AC006947 Homo sapiens chromosome 17, clone hRPK.115_C_3, complete sequence
Length = 175775
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 354 gtacccccactcccagctga 373
||||||||||||||||||||
Sbjct: 60837 gtacccccactcccagctga 60856
>gb| AE003476.3 | Drosophila melanogaster chromosome 3L, section 10 of 83 of the complete
sequence
Length = 304419
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 204 acggacggacgggcgggcgg 223
||||||||||||||||||||
Sbjct: 80644 acggacggacgggcgggcgg 80625
>gb| AC116680.21 | Mus musculus chromosome 12, clone RP23-476M16, complete sequence
Length = 215303
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 6 aactcaactgaacttgaaat 25
||||||||||||||||||||
Sbjct: 198046 aactcaactgaacttgaaat 198065
>gb| U68299.1 |MCU68299 Mouse cytomegalovirus 1 complete genomic sequence
Length = 230278
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcgg 223
||||||||||||||||||||
Sbjct: 161987 acggacggacgggcgggcgg 162006
>emb| CR388150.14 | Zebrafish DNA sequence from clone DKEY-115A2 in linkage group 3, complete
sequence
Length = 170964
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 204 acggacggacgggcgggcgg 223
||||||||||||||||||||
Sbjct: 119772 acggacggacgggcgggcgg 119791
>gb| DP000010.1 | Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
Length = 28369397
Score = 40.1 bits (20), Expect = 5.6
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 305 cgccggcgaggccgccgccg 324
||||||||||||||||||||
Sbjct: 5347922 cgccggcgaggccgccgccg 5347941
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,494,801
Number of Sequences: 3902068
Number of extensions: 3494801
Number of successful extensions: 87505
Number of sequences better than 10.0: 257
Number of HSP's better than 10.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 85256
Number of HSP's gapped (non-prelim): 2242
length of query: 420
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 398
effective length of database: 17,147,199,772
effective search space: 6824585509256
effective search space used: 6824585509256
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)