>JI60_HORVU (Q00531) 60 kDa jasmonate-induced protein (EC 3.2.2.22) (rRNA|
           N-glycosidase)
          Length = 560

 Score =  201 bits (511), Expect = 7e-52
 Identities = 97/97 (100%), Positives = 97/97 (100%)
 Frame = -3

Query: 455 VARSKLFDFGCVLFYNEAAGVRVRPGELVPLARHALAVPLHMPLTIELDIRHGGSGDEIV 276
           VARSKLFDFGCVLFYNEAAGVRVRPGELVPLARHALAVPLHMPLTIELDIRHGGSGDEIV
Sbjct: 464 VARSKLFDFGCVLFYNEAAGVRVRPGELVPLARHALAVPLHMPLTIELDIRHGGSGDEIV 523

Query: 275 RGELEFKTAIDGLHTGRLVGVNDAEFEVTILWSEYPW 165
           RGELEFKTAIDGLHTGRLVGVNDAEFEVTILWSEYPW
Sbjct: 524 RGELEFKTAIDGLHTGRLVGVNDAEFEVTILWSEYPW 560

>YHCR_BACSU (P54602) Endonuclease yhcR precursor (EC 3.1.31.-)|
          Length = 1217

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 23/94 (24%), Positives = 34/94 (36%), Gaps = 18/94 (19%)
 Frame = -3

Query: 416  FYNEAAGVRVRPGELVPLARHALAVPLHMPLT------------------IELDIRHGGS 291
            F +EA  V     EL      A+AV  HM                      E+D+     
Sbjct: 765  FTDEATAVNKAAEELKKKGVKAIAVLAHMSAEQNGNAITGESADLANKTDSEIDVIFAAH 824

Query: 290  GDEIVRGELEFKTAIDGLHTGRLVGVNDAEFEVT 189
              ++V GE+  K  +     G+ +GV D E + T
Sbjct: 825  NHQVVNGEVNGKLIVQAFEYGKAIGVVDVEIDKT 858

>PAP2_YEAST (P53632) Poly(A) RNA polymerase protein 2 (EC 2.7.7.-) (DNA|
           polymerase sigma) (DNA polymerase kappa) (Topoisomerase
           1-related protein TRF4)
          Length = 584

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 12/45 (26%), Positives = 27/45 (60%)
 Frame = +3

Query: 306 NVKLNRERHVQRHGKRMPRQGDQLPRSHAHSSGLVVEEHTAEIEQ 440
           ++ LN E  V+    R  ++ ++LP+ H  + G++V EH ++ ++
Sbjct: 37  SISLNDENEVEILPSRNEQETNKLPKDHVTADGILVLEHKSDDDE 81

>EXT2_HUMAN (Q93063) Exostosin-2 (EC 2.4.1.224) (EC 2.4.1.225)|
           (Glucuronosyl-N-acetylglucosaminyl-proteoglycan/N-
           acetylglucosaminyl-proteoglycan
           4-alpha-N-acetylglucosaminyltransferase) (Putative tumor
           suppressor protein EXT2) (Multiple exostoses protein
          Length = 718

 Score = 25.8 bits (55), Expect(2) = 3.8
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -1

Query: 175 STLGRHPCERADYYQLQILYGTQYELKNKCLSLT 74
           S +G HP  R D   LQ+ +G    + +KC +L+
Sbjct: 257 SQVGLHPEYREDLEALQVKHGESVLVLDKCTNLS 290



 Score = 22.3 bits (46), Expect(2) = 3.8
 Identities = 7/21 (33%), Positives = 15/21 (71%)
 Frame = -3

Query: 350 LAVPLHMPLTIELDIRHGGSG 288
           +++P++ PL+ E+D+   G G
Sbjct: 228 VSIPVYSPLSAEVDLPEKGPG 248

>CDAS_THEET (P29964) Cyclomaltodextrinase (EC 3.2.1.54) (CDase)|
           (Cyclomaltodextrin hydrolase, decycling)
          Length = 574

 Score = 29.6 bits (65), Expect = 3.8
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 4/50 (8%)
 Frame = -1

Query: 142 DYYQLQILYGTQYE----LKNKCLSLTHTNLYFLIYL**IKANKTYIYMF 5
           D  ++ +LY  +Y+     K K + LTHTN  F  Y   ++ NK ++Y F
Sbjct: 33  DVDRVYVLYKDRYDWLGKFKIKPMVLTHTNELFDYYETTLELNKKFVYFF 82

>SLU7_CRYNE (Q5KII3) Pre-mRNA-splicing factor SLU7|
          Length = 574

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 15/47 (31%), Positives = 23/47 (48%)
 Frame = +3

Query: 213 DTNKTSCMEAVDGSFELKLASNNFISGSTMTNVKLNRERHVQRHGKR 353
           DTNKTS +    G   L+   N  +SG T   V+ +R   + +  +R
Sbjct: 345 DTNKTSILAKYGGEEHLQRMPNELLSGQTENYVEYSRSGQIIKGRER 391

>GNMT_HUMAN (Q14749) Glycine N-methyltransferase (EC 2.1.1.20)|
          Length = 294

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
 Frame = +1

Query: 31  PLFITNILENTNWYVSRKDTYFSTRTEFHIVFVVDSSPLAHMGVYQG-YSDHKIVTSNSA 207
           P F   ++E  NW    KD   S    F  V  + +S  AH+   +G  S+H++   N A
Sbjct: 105 PAFDKWVIEEANWMTLDKDVPQSAEGGFDAVICLGNS-FAHLPDCKGDQSEHRLALKNIA 163

Query: 208 SL 213
           S+
Sbjct: 164 SM 165

>SYFB_SALRD (Q2RYT3) Phenylalanyl-tRNA synthetase beta chain (EC 6.1.1.20)|
           (Phenylalanine--tRNA ligase beta chain) (PheRS)
          Length = 830

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 17/56 (30%), Positives = 26/56 (46%)
 Frame = +1

Query: 109 EFHIVFVVDSSPLAHMGVYQGYSDHKIVTSNSASLTPTRRPVWRPSMAVLNSSSPL 276
           EFH   +VDS+       Y+  S   +V  + A L P  +PV     A+  + +PL
Sbjct: 714 EFHWAALVDSATAEQHRDYEPVSRFPVVDRDLAVLVPADQPVGPLQRAIREAGAPL 769

>ATPA_SCHPO (P24487) ATP synthase alpha chain, mitochondrial precursor (EC|
           3.6.3.14)
          Length = 536

 Score = 28.5 bits (62), Expect = 8.4
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = -3

Query: 428 GCVLFYNEAAGVRVRPGELVPLARHALAVPL 336
           GCVLF N+     VR GE+V   RH + VP+
Sbjct: 100 GCVLFGNDRL---VREGEVVKRTRHIVDVPV 127


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,446,970
Number of Sequences: 219361
Number of extensions: 1295174
Number of successful extensions: 4050
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3964
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4050
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2851757076
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)