Clone Name | rbart42c10 |
---|---|
Clone Library Name | barley_pub |
>emb|X66376.1|HVJASIP H.vulgare mRNA for jasmonate-induced protein Length = 1892 Score = 880 bits (444), Expect = 0.0 Identities = 444/444 (100%) Strand = Plus / Minus Query: 14 tatataagttttgttggcctttattcattacaaatatattagaaaatacaaattggtatg 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1883 tatataagttttgttggcctttattcattacaaatatattagaaaatacaaattggtatg 1824 Query: 74 tgtcaaggaaagacacttatttttcaactcgtactgagttccatatagtatttgtagttg 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1823 tgtcaaggaaagacacttatttttcaactcgtactgagttccatatagtatttgtagttg 1764 Query: 134 atagtagtccgctcgctcacatgggtgtctaccaagggtactccgaccataagattgtca 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1763 atagtagtccgctcgctcacatgggtgtctaccaagggtactccgaccataagattgtca 1704 Query: 194 cctcgaattcagcatcattgacaccaacaagacgtcctgtatggaggccgtcgatggcag 253 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1703 cctcgaattcagcatcattgacaccaacaagacgtcctgtatggaggccgtcgatggcag 1644 Query: 254 ttttgaactcaagctcgcctctaacaatttcatctccggatccaccatgacgaatgtcaa 313 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1643 ttttgaactcaagctcgcctctaacaatttcatctccggatccaccatgacgaatgtcaa 1584 Query: 314 gctcaatcgtgagcggcatgtgcagcggcacggcaagcgcatgcctcgccaaggggacca 373 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1583 gctcaatcgtgagcggcatgtgcagcggcacggcaagcgcatgcctcgccaaggggacca 1524 Query: 374 gctccccaggtcgcacgcgcactccagcggcctcgttgtagaagagcacacagccgaaat 433 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1523 gctccccaggtcgcacgcgcactccagcggcctcgttgtagaagagcacacagccgaaat 1464 Query: 434 cgaacagcttgctgcgagcaacga 457 |||||||||||||||||||||||| Sbjct: 1463 cgaacagcttgctgcgagcaacga 1440
>gb|AY109619.1| Zea mays CL9605_1 mRNA sequence Length = 1251 Score = 109 bits (55), Expect = 8e-21 Identities = 237/298 (79%), Gaps = 6/298 (2%) Strand = Plus / Plus Query: 163 taccaagggtactccgaccataagattgtcacctcgaattcagcatcattgacaccaaca 222 ||||||||||||| ||||||| | |||| ||| || |||||||| |||| | |||||| Sbjct: 169 taccaagggtactgcgaccatgaaattgccacttccaattcagcgccattttctccaaca 228 Query: 223 agacgtcctgtatggaggccgtcgatggcagttttgaactcaagctcgcctctaacaatt 282 || ||| | || || |||||| | | |||| ||||||||||| | |||| ||||||| Sbjct: 229 agtcgttccgtgtgctggccgttggtcgcaggattgaactcaaggacccctccaacaatt 288 Query: 283 tcatctccggatccaccatgacgaatgtcaagctcaatcgtgagcggcatgtgcagcggc 342 ||||| ||||| || || | | ||||||||||||||| |||||||||||||||||| Sbjct: 289 tcatcgccgga---acagcgatgcaggtcaagctcaatcgtcagcggcatgtgcagcggc 345 Query: 343 acggcaagcgcatgcctcgccaaggggaccagctccccaggtcgcacgcgcactcca--- 399 ||||| ||||| | ||||||||| | | ||||| ||||||||| ||||||| Sbjct: 346 acggcgagcgcttccctcgccaactgaatcagctnnnnnggtcgcacgttcactccattg 405 Query: 400 gcggcctcgttgtagaagagcacacagccgaaatcgaacagcttgctgcgagcaacga 457 | |||| |||||||||||||| ||||||| ||||||||||||||||||||||||| Sbjct: 406 tcaccctctttgtagaagagcacgcagccgacgtcgaacagcttgctgcgagcaacga 463
>gb|BT017846.1| Zea mays clone EL01N0510E02.c mRNA sequence Length = 1034 Score = 107 bits (54), Expect = 3e-20 Identities = 128/152 (84%), Gaps = 3/152 (1%) Strand = Plus / Minus Query: 309 gtcaagctcaatcgtgagcggcatgtgcagcggcacggcaagcgcatgcctcgccaaggg 368 ||||||||||||||| ||||||||||||||||||||||| || || | ||||||||| | Sbjct: 706 gtcaagctcaatcgtcagcggcatgtgcagcggcacggcgagtgcttccctcgccaactg 647 Query: 369 gaccagctccccaggtcgcacgcgcactcca---gcggcctcgttgtagaagagcacaca 425 |||||| |||| ||||||||| ||||||| | |||| |||||||||||||| || Sbjct: 646 aaccagcccccccggtcgcacgttcactccattgtcaccctctttgtagaagagcacgca 587 Query: 426 gccgaaatcgaacagcttgctgcgagcaacga 457 ||| | || |||||||||||||||||||||| Sbjct: 586 gccaacgtcaaacagcttgctgcgagcaacga 555
>gb|AE014834.1| Plasmodium falciparum 3D7 chromosome 10 section 6 of 7 of the complete sequence Length = 253001 Score = 46.1 bits (23), Expect = 0.100 Identities = 23/23 (100%) Strand = Plus / Minus Query: 33 tttattcattacaaatatattag 55 ||||||||||||||||||||||| Sbjct: 102781 tttattcattacaaatatattag 102759
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 332 tgtgcagcggcacggcaagcgc 353 |||||||||||||||||||||| Sbjct: 1043253 tgtgcagcggcacggcaagcgc 1043232
>gb|AE014822.1| Plasmodium falciparum 3D7 chromosome 14 section 7 of 13 of the complete sequence Length = 253924 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Plus Query: 42 tacaaatatattagaaaatacaaatt 67 |||||||||||||||||||| ||||| Sbjct: 237232 tacaaatatattagaaaataaaaatt 237257
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 4 aaaacatatatatataagttttgttg 29 ||||||| |||||||||||||||||| Sbjct: 20034725 aaaacatctatatataagttttgttg 20034700
>dbj|AP004810.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1068H08 Length = 152794 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 4 aaaacatatatatataagttttgttg 29 ||||||| |||||||||||||||||| Sbjct: 22999 aaaacatctatatataagttttgttg 22974
>dbj|AP004809.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1018E06 Length = 178499 Score = 44.1 bits (22), Expect = 0.39 Identities = 25/26 (96%) Strand = Plus / Minus Query: 4 aaaacatatatatataagttttgttg 29 ||||||| |||||||||||||||||| Sbjct: 173065 aaaacatctatatataagttttgttg 173040
>emb|AL513502.3|HS123J20 Homo sapiens chromosome 9 BAC RP11-123j20, complete sequence Length = 174636 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 ttggcctttattcattacaaat 48 |||||||||||||||||||||| Sbjct: 8931 ttggcctttattcattacaaat 8952
>emb|AL450004.4|HS520K3 Homo sapiens chromosome 9 BAC RP11-520K3, complete sequence Length = 174662 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Plus Query: 27 ttggcctttattcattacaaat 48 |||||||||||||||||||||| Sbjct: 91099 ttggcctttattcattacaaat 91120
>emb|AL671896.4| Mouse DNA sequence from clone RP23-354F16 on chromosome X, complete sequence Length = 78197 Score = 44.1 bits (22), Expect = 0.39 Identities = 22/22 (100%) Strand = Plus / Minus Query: 22 ttttgttggcctttattcatta 43 |||||||||||||||||||||| Sbjct: 12446 ttttgttggcctttattcatta 12425
>gb|AF297045.1| Zea mays homocysteine S-methyltransferase-2 mRNA, complete cds Length = 1535 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 aaaacatatatatataagttttgtt 28 ||||| ||||||||||||||||||| Sbjct: 1493 aaaacctatatatataagttttgtt 1517
>gb|AC125174.3| Mus musculus BAC clone RP24-544G11 from chromosome 16, complete sequence Length = 196646 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 36 attcattacaaatatattagaaaat 60 |||| |||||||||||||||||||| Sbjct: 185977 attctttacaaatatattagaaaat 186001
>gb|AC127338.4| Mus musculus BAC clone RP23-174F20 from 7, complete sequence Length = 199546 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 1 agcaaaacatatatatataagtttt 25 ||||||||||||||||||| ||||| Sbjct: 145986 agcaaaacatatatatatatgtttt 145962
>gb|AC122817.3| Mus musculus BAC clone RP23-241M6 from 16, complete sequence Length = 185702 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 36 attcattacaaatatattagaaaat 60 |||| |||||||||||||||||||| Sbjct: 164886 attctttacaaatatattagaaaat 164862
>emb|CR974413.1| M.murinus DNA sequence from clone CH257-4B4, complete sequence Length = 270722 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 46 aatatattagaaaatacaaat 66 ||||||||||||||||||||| Sbjct: 67333 aatatattagaaaatacaaat 67313
>emb|CR407559.8| Zebrafish DNA sequence from clone CH211-283G2 in linkage group 5, complete sequence Length = 149707 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 ggtatgtgtcaaggaaagaca 88 ||||||||||||||||||||| Sbjct: 27383 ggtatgtgtcaaggaaagaca 27363
>emb|AL161534.2|ATCHRIV34 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 34 Length = 196107 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 aaaacatatatatataagttttgtt 28 |||||||||||||||||| |||||| Sbjct: 82939 aaaacatatatatataagatttgtt 82963
>emb|AL049730.2|ATT1P17 Arabidopsis thaliana DNA chromosome 4, BAC clone T1P17 (ESSA project) Length = 137519 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 4 aaaacatatatatataagttttgtt 28 |||||||||||||||||| |||||| Sbjct: 78407 aaaacatatatatataagatttgtt 78431
>emb|AL513468.9| Mouse DNA sequence from clone RP23-104I6 on chromosome X, complete sequence Length = 211194 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 45 aaatatattagaaaatacaaa 65 ||||||||||||||||||||| Sbjct: 159697 aaatatattagaaaatacaaa 159677
>ref|XM_631318.1| Dictyostelium discoideum ADP-ribosylation factor-like protein (DDB0229377), partial mRNA Length = 588 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 tatttgtagttgatagtagt 141 |||||||||||||||||||| Sbjct: 203 tatttgtagttgatagtagt 222
>gb|AE017140.1| Yersinia pestis biovar Medievalis str. 91001 section 14 of 16 of the complete genome Length = 290393 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 314 gctcaatcgtgagcggcatg 333 |||||||||||||||||||| Sbjct: 215761 gctcaatcgtgagcggcatg 215780
>gb|AC140279.4| Mus musculus BAC clone RP23-338N10 from chromosome 16, complete sequence Length = 211002 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gaccagctccccaggtcgca 388 |||||||||||||||||||| Sbjct: 153238 gaccagctccccaggtcgca 153219
>gb|AE017334.2| Bacillus anthracis str. 'Ames Ancestor', complete genome Length = 5227419 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 attacaaatatattagaaaa 59 |||||||||||||||||||| Sbjct: 3276173 attacaaatatattagaaaa 3276154
>gb|AC129718.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088I06, complete sequence Length = 187651 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 gttgtagaagagcacacagc 427 |||||||||||||||||||| Sbjct: 159141 gttgtagaagagcacacagc 159160
>gb|AE017225.1| Bacillus anthracis str. Sterne, complete genome Length = 5228663 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 attacaaatatattagaaaa 59 |||||||||||||||||||| Sbjct: 3276739 attacaaatatattagaaaa 3276720
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 6.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 335 gcagcggcacggcaagcgcatgcc 358 ||||||||||||||||||| |||| Sbjct: 2556779 gcagcggcacggcaagcgcgtgcc 2556802
>gb|AE009952.1| Yersinia pestis KIM, complete genome Length = 4600755 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 gctcaatcgtgagcggcatg 333 |||||||||||||||||||| Sbjct: 3650813 gctcaatcgtgagcggcatg 3650794
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 tatatatataagttttgttg 29 |||||||||||||||||||| Sbjct: 35308745 tatatatataagttttgttg 35308726
>gb|AC006456.3| Homo sapiens PAC clone RP5-969D4 from 7, complete sequence Length = 75609 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 37 ttcattacaaatatattaga 56 |||||||||||||||||||| Sbjct: 40786 ttcattacaaatatattaga 40767
>gb|AC122509.2| Mus musculus BAC clone RP24-443G20 from chromosome 16, complete sequence Length = 178757 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gaccagctccccaggtcgca 388 |||||||||||||||||||| Sbjct: 51098 gaccagctccccaggtcgca 51079
>gb|AC023600.19| Homo sapiens 3 BAC RP11-754J20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 185326 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 34 ttattcattacaaatatatt 53 |||||||||||||||||||| Sbjct: 144526 ttattcattacaaatatatt 144507
>gb|AC079316.15| Homo sapiens 12 BAC RP11-43D4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 178905 Score = 40.1 bits (20), Expect = 6.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 56 aaaatacaaattggtatgtgtcaaggaa 83 |||||| |||| |||||||||||||||| Sbjct: 35506 aaaataaaaataggtatgtgtcaaggaa 35533
>gb|AC122834.2| Mus musculus BAC clone RP23-183H9 from 15, complete sequence Length = 191019 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 atatatatataagttttgtt 28 |||||||||||||||||||| Sbjct: 130577 atatatatataagttttgtt 130558
>ref|XM_719182.1| Plasmodium yoelii yoelii str. 17XNL nonclathrin coat protein zeta1-COP (PY04027) partial mRNA Length = 642 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 42 tacaaatatattagaaaata 61 |||||||||||||||||||| Sbjct: 81 tacaaatatattagaaaata 100
>gb|AC119861.8| Mus musculus chromosome 3, clone RP23-291P19, complete sequence Length = 206094 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 9 atatatatataagttttgtt 28 |||||||||||||||||||| Sbjct: 152814 atatatatataagttttgtt 152795
>gb|CP000001.1| Bacillus cereus E33L, complete genome Length = 5300915 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 attacaaatatattagaaaa 59 |||||||||||||||||||| Sbjct: 3347373 attacaaatatattagaaaa 3347354
>emb|Y12461.1|HAPHAMLY Helianthus annuus mRNA for phenylalanine ammonia lyase Length = 2322 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 aaatatattagaaaatacaa 64 |||||||||||||||||||| Sbjct: 2297 aaatatattagaaaatacaa 2278
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 gaaatcgaacagcttgctgc 448 |||||||||||||||||||| Sbjct: 250392 gaaatcgaacagcttgctgc 250373
>gb|AC110597.7| Homo sapiens chromosome 18, clone CTD-2541J13, complete sequence Length = 180310 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 attacaaatatattagaaaa 59 |||||||||||||||||||| Sbjct: 63211 attacaaatatattagaaaa 63230
>emb|BX936398.1| Yersinia pseudotuberculosis IP32953 genome, complete sequence Length = 4744671 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 gctcaatcgtgagcggcatg 333 |||||||||||||||||||| Sbjct: 3768518 gctcaatcgtgagcggcatg 3768499
>emb|AL645800.5| Zebrafish DNA sequence from clone XX-184L24 Contains three novel genes and the spi1 gene for transcription factor spi1, complete sequence Length = 98204 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 47 atatattagaaaatacaaat 66 |||||||||||||||||||| Sbjct: 31343 atatattagaaaatacaaat 31362
>emb|AJ414145.1| Yersinia pestis strain CO92 complete genome; segment 5/20 Length = 208050 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 314 gctcaatcgtgagcggcatg 333 |||||||||||||||||||| Sbjct: 111744 gctcaatcgtgagcggcatg 111725
>gb|AC107905.5| Homo sapiens chromosome 15, clone CTD-2026J24, complete sequence Length = 175627 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 tatattagaaaatacaaatt 67 |||||||||||||||||||| Sbjct: 59078 tatattagaaaatacaaatt 59059
>gb|AC025254.14| Homo sapiens 12 BAC RP11-1041F24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 160867 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 46 aatatattagaaaatacaaa 65 |||||||||||||||||||| Sbjct: 90262 aatatattagaaaatacaaa 90281
>gb|DQ311189.1| Bombyx mori heat shock protein 70 mRNA, complete cds Length = 2266 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 216 accaacaagacgtcctgtat 235 |||||||||||||||||||| Sbjct: 1270 accaacaagacgtcctgtat 1251
>gb|AC022302.7|AC022302 Homo sapiens chromosome 15 clone CTD-2019H15 map 15q21.2, complete sequence Length = 176872 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 5 aaacatatatatataagttt 24 |||||||||||||||||||| Sbjct: 26389 aaacatatatatataagttt 26408
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 408 gttgtagaagagcacacagc 427 |||||||||||||||||||| Sbjct: 24090652 gttgtagaagagcacacagc 24090671
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 10 tatatatataagttttgttg 29 |||||||||||||||||||| Sbjct: 35398817 tatatatataagttttgttg 35398798
>gb|AC099324.5| Oryza sativa chromosome 3 BAC OSJNBb0043P23 genomic sequence, complete sequence Length = 116443 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 10 tatatatataagttttgttg 29 |||||||||||||||||||| Sbjct: 59709 tatatatataagttttgttg 59728
>gb|AC016637.7| Homo sapiens chromosome 5 clone RP11-34J15, complete sequence Length = 173317 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cattacaaatatattagaaa 58 |||||||||||||||||||| Sbjct: 35499 cattacaaatatattagaaa 35518
>emb|BX294175.5| Zebrafish DNA sequence from clone DKEY-281I8 in linkage group 1, complete sequence Length = 165355 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 43 acaaatatattagaaaatac 62 |||||||||||||||||||| Sbjct: 25068 acaaatatattagaaaatac 25049
>gb|AE016879.1| Bacillus anthracis str. Ames, complete genome Length = 5227293 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 attacaaatatattagaaaa 59 |||||||||||||||||||| Sbjct: 3276046 attacaaatatattagaaaa 3276027
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 acatatatatataagttttg 26 |||||||||||||||||||| Sbjct: 156042 acatatatatataagttttg 156061
>emb|AL954855.8| Mouse DNA sequence from clone RP23-211L10 on chromosome X, complete sequence Length = 87910 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 agaaaatacaaattggtatg 73 |||||||||||||||||||| Sbjct: 35463 agaaaatacaaattggtatg 35482
>gb|AC156836.6| Mus musculus BAC clone RP23-88L11 from chromosome 10, complete sequence Length = 255961 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 aacatatatatataagtttt 25 |||||||||||||||||||| Sbjct: 30210 aacatatatatataagtttt 30191
>gb|AC169630.2| Mus musculus BAC clone RP23-465E13 from chromosome 16, complete sequence Length = 186404 Score = 40.1 bits (20), Expect = 6.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 369 gaccagctccccaggtcgca 388 |||||||||||||||||||| Sbjct: 35474 gaccagctccccaggtcgca 35455 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 13,380,289 Number of Sequences: 3902068 Number of extensions: 13380289 Number of successful extensions: 118108 Number of sequences better than 10.0: 58 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 117498 Number of HSP's gapped (non-prelim): 609 length of query: 457 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 435 effective length of database: 17,147,199,772 effective search space: 7459031900820 effective search space used: 7459031900820 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)