Clone Name | rbart42c08 |
---|---|
Clone Library Name | barley_pub |
>SPR1_MOUSE (Q8BFQ3) Sphingosylphosphorylcholine receptor (G-protein coupled| receptor 68) Length = 365 Score = 29.6 bits (65), Expect = 2.9 Identities = 16/30 (53%), Positives = 22/30 (73%) Frame = +3 Query: 288 RTSRAQEAYQISSPAASNPRSGCPEEGEQP 377 RTSRA+EAY + +P AS +SG +GE+P Sbjct: 312 RTSRAREAYPLGAPEASG-KSGA--QGEEP 338
>GFRA4_RAT (Q9EPI2) GDNF family receptor alpha-4 precursor (GFR-alpha-4)| (Persephin receptor) Length = 273 Score = 29.3 bits (64), Expect = 3.7 Identities = 17/34 (50%), Positives = 18/34 (52%) Frame = +3 Query: 309 AYQISSPAASNPRSGCPEEGEQPLSRAVATGCVG 410 A+Q S A R GCPEEG RA A G VG Sbjct: 150 AFQASCAPAPGSRDGCPEEGGPRCLRAYA-GLVG 182
>PKD1_HUMAN (P98161) Polycystin-1 precursor (Autosomal dominant polycystic| kidney disease protein 1) Length = 4303 Score = 28.9 bits (63), Expect = 4.9 Identities = 19/48 (39%), Positives = 25/48 (52%) Frame = -3 Query: 373 CSPSSGHPDLGFEAAGDEIW*ASWAREVRLKLELPWI*CCCSCALYLL 230 CSP+ GHP G +A +SW + +LE W C +CAL LL Sbjct: 729 CSPAPGHP--GPQAPYLSANASSWLPHLPAQLEGTW--ACPACALRLL 772
>PCGF6_HUMAN (Q9BYE7) Polycomb group RING finger protein 6 (RING finger protein| 134) (Mel18 and Bmi1-like RING finger) Length = 352 Score = 28.9 bits (63), Expect = 4.9 Identities = 14/29 (48%), Positives = 14/29 (48%) Frame = +3 Query: 324 SPAASNPRSGCPEEGEQPLSRAVATGCVG 410 SP A P EEG PLS A GC G Sbjct: 32 SPPALTPAPAAGEEGPAPLSETGAPGCSG 60
>TBCD2_HUMAN (Q9BYX2) TBC1 domain family member 2 (Prostate antigen recognized| and indentified by SEREX) (PARIS-1) Length = 917 Score = 28.9 bits (63), Expect = 4.9 Identities = 16/51 (31%), Positives = 23/51 (45%) Frame = +3 Query: 246 QLQQHQIQGNSSLRRTSRAQEAYQISSPAASNPRSGCPEEGEQPLSRAVAT 398 Q H I+GN + T P +P+SG P+ EQPL+ +T Sbjct: 216 QNTMHNIRGNKQAQGTGH-------EPPGEDSPQSGEPQREEQPLASDAST 259
>GSHB_PROMP (Q7TUG9) Glutathione synthetase (EC 6.3.2.3) (Glutathione synthase)| (GSH synthetase) (GSH-S) (GSHase) Length = 307 Score = 28.5 bits (62), Expect = 6.4 Identities = 12/25 (48%), Positives = 15/25 (60%) Frame = -3 Query: 337 EAAGDEIW*ASWAREVRLKLELPWI 263 EA GDE+W +SW EV PW+ Sbjct: 43 EARGDEVWASSWRAEV-----CPWV 62
>UBP37_HUMAN (Q86T82) Ubiquitin carboxyl-terminal hydrolase 37 (EC 3.1.2.15)| (Ubiquitin thioesterase 37) (Ubiquitin-specific-processing protease 37) (Deubiquitinating enzyme 37) Length = 979 Score = 28.5 bits (62), Expect = 6.4 Identities = 27/101 (26%), Positives = 42/101 (41%), Gaps = 7/101 (6%) Frame = +3 Query: 78 HLYGSTQVFTTTLASQRGTHERKLRIYGQKSAHQPGSTINQ*ICNYRTMNWRRYRAQL-- 251 H G T + T ++SQ + +R L Q ++ + CN W + R L Sbjct: 279 HSSGGTNLDRTNVSSQTPSAKRSLGFLPQPVP----LSVKKLRCNQDYTGWNKPRVPLSS 334 Query: 252 -QQHQIQGNSSLRRT----SRAQEAYQISSPAASNPRSGCP 359 QQ Q+QG S+L T + Q + + S A + G P Sbjct: 335 HQQQQLQGFSNLGNTCYMNAILQSLFSLQSFANDLLKQGIP 375
>ERYA2_SACER (Q03132) Erythronolide synthase, modules 3 and 4 (EC 2.3.1.94) (ORF| 2) (6-deoxyerythronolide B synthase II) (DEBS 2) Length = 3566 Score = 28.1 bits (61), Expect = 8.3 Identities = 18/64 (28%), Positives = 25/64 (39%) Frame = -1 Query: 303 GREKFVLNWSCPGSDVAVAVPXXXXXXXXXXXXXIGLLLILVDAPTFAHICAIFSHEFHA 124 G E+ VL +CPG D+ AV L L D P A + A F + Sbjct: 1154 GAERLVLAGACPGDDLLAAVEEAGASAVVCAQDAAALREALGDEPVTALVHAGTLTNFGS 1213 Query: 123 VMQV 112 + +V Sbjct: 1214 ISEV 1217 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,332,815 Number of Sequences: 219361 Number of extensions: 1157394 Number of successful extensions: 3225 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 3132 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3224 length of database: 80,573,946 effective HSP length: 100 effective length of database: 58,637,846 effective search space used: 2169600302 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)