>PTFAX_XANCP (P45597) Multiphosphoryl transfer protein (MTP) [Includes:|
           Phosphoenolpyruvate-protein phosphotransferase (EC
           2.7.3.9) (Phosphotransferase system enzyme I);
           Phosphocarrier protein HPr (Protein H);
           Fructose-specific phosphotransferase enzyme I
          Length = 838

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = +2

Query: 113 ILARAWKGEHSPHSNNATATITTHHLSWSWPYPKGEHA 226
           ++  A  G+ +P ++ A AT       W+  YP G HA
Sbjct: 139 VIVAALTGDRAPDTSAAPATDLAERFEWTIAYPSGLHA 176

>AXL2_YEAST (P38928) Protein AXL2 precursor (Suppressor of RHO3 protein 4)|
          Length = 823

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +2

Query: 140 HSPHSNNATATITTHHLSWSWPYPKGEH-ADVSGSTRAGTRYFRPWAPFALKLA 298
           HS HS NAT+T ++HH + +  Y    + A +S ++ A T      AP AL  A
Sbjct: 445 HSNHSANATSTRSSHHSTSTSSYTSSTYTAKISSTSAAATSS----APAALPAA 494

>CDC7_YEAST (P06243) Cell division control protein 7 (EC 2.7.11.1)|
          Length = 507

 Score = 29.3 bits (64), Expect = 2.6
 Identities = 23/93 (24%), Positives = 40/93 (43%), Gaps = 18/93 (19%)
 Frame = +2

Query: 44  RSKLFSFNK*KNFIST------PLQGHGLILARAWKGEHSPHSNNATATITT-------- 181
           +S + S N   N+ +T       ++ H        + ++SP+S+N T  + T        
Sbjct: 193 KSMISSQNDYDNYANTNHDGGYSMRNHEQFCPCIMRNQYSPNSHNQTPPMVTIQNGKVVH 252

Query: 182 ----HHLSWSWPYPKGEHADVSGSTRAGTRYFR 268
               + +  +  YPK E   +  + RAGTR FR
Sbjct: 253 LNNVNGVDLTKGYPKNETRRIKRANRAGTRGFR 285

>FAT2_RAT (O88277) Protocadherin Fat 2 precursor (Multiple epidermal growth|
            factor-like domains 1)
          Length = 4351

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 13/40 (32%), Positives = 17/40 (42%)
 Frame = +2

Query: 101  GHGLILARAWKGEHSPHSNNATATITTHHLSWSWPYPKGE 220
            GH  I+ R W GE   + + A     T+     W YP  E
Sbjct: 4160 GHEPIIKRTWSGEELVYPSGAAVWPPTYSRKKHWEYPHPE 4199

>TYSY_PSEAE (Q9I6F1) Thymidylate synthase (EC 2.1.1.45) (TS) (TSase)|
          Length = 264

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 1/75 (1%)
 Frame = +2

Query: 8   MVVSKQCSLTLIRSKLFSFNK*KNFISTPLQGHGLILARAWKGEHSPHSNNATATITTHH 187
           +V +K+C L  I  +L  F K    I+  L+ HG+ +   W  E+             + 
Sbjct: 44  LVTTKKCHLKSIVHELLWFLKGSTNIAY-LKEHGVSIWDEWADENGDLG-------PVYG 95

Query: 188 LSW-SWPYPKGEHAD 229
             W SWP P G H D
Sbjct: 96  YQWRSWPAPDGRHID 110

>KEX1_KLULA (P09231) KEX1 protease precursor (EC 3.4.21.-)|
          Length = 756

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 17/51 (33%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = +2

Query: 128 WKGEHSPHSNNATATITTHHLSWSWPYPKGEHADVS-GSTRAGTRYFRPWA 277
           WKG H P+S + +A +   + S S  Y K    D    +T  GT    P A
Sbjct: 329 WKGLHPPYSESCSAVMVVTYSSGSGNYIKTTDLDEKCSNTHGGTSAAAPLA 379

>HXA9_HUMAN (P31269) Homeobox protein Hox-A9 (Hox-1G)|
          Length = 272

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
 Frame = +2

Query: 77  NFISTPLQGHGLILARAWKGEHSPHSNNATATITTHHLSWSWPYPKGEHADVSGSTRAGT 256
           +F     Q    +   +W   H+  +N   A +  HH    + +P+   A V+ +   G 
Sbjct: 50  DFSPCSFQSKATVFGASWNPVHAAGANAVPAAVYHHHHHHPYVHPQ---APVAAAAPDG- 105

Query: 257 RYFRPW---APFALKLA 298
           RY R W    P AL  A
Sbjct: 106 RYMRSWLEPTPGALSFA 122

>US6NL_HUMAN (Q92738) USP6 N-terminal-like protein (Related to the N-terminus of|
           tre) (RN-tre)
          Length = 828

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
 Frame = +1

Query: 94  STGTRINISTRVEGGTLSTQ*QRHRNYNY-APLIM----VMALP----QGGACGRVGVDE 246
           S GT++N S R  G TLS      ++Y+  +PL++    +  LP     GG  G  G  +
Sbjct: 659 SPGTQLNPSRRPHGSTLSVSASPEKSYSRPSPLVLPSSRIEVLPVDTGAGGYSGNSGSPK 718

Query: 247 GRDQVLPAV 273
               ++P V
Sbjct: 719 NGKLIIPPV 727

>GMIP_HUMAN (Q9P107) GEM-interacting protein (GMIP)|
          Length = 970

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 11/55 (20%)
 Frame = +2

Query: 164 TATITTHHLSWSWPYPK------GEHADV-----SGSTRAGTRYFRPWAPFALKL 295
           TAT+T     WS P P+      GE  D+      G   A   Y + W+ +A +L
Sbjct: 57  TATVTNEASCWSGPSPEGPVPLTGEELDLRLIRTKGGVDAALEYAKTWSRYAKEL 111


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,212,917
Number of Sequences: 219361
Number of extensions: 812258
Number of successful extensions: 1753
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1753
length of database: 80,573,946
effective HSP length: 76
effective length of database: 63,902,510
effective search space used: 1533660240
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)