Clone Name | rbart42c04 |
---|---|
Clone Library Name | barley_pub |
>ZNT2_HUMAN (Q9BRI3) Zinc transporter 2 (ZnT-2) (Solute carrier family 30| member 2) Length = 323 Score = 29.6 bits (65), Expect = 3.7 Identities = 11/23 (47%), Positives = 15/23 (65%) Frame = +2 Query: 74 IQNLNLALQTNHICRYTSGPDNH 142 +Q + LA Q+NH C GPD+H Sbjct: 40 LQAIELAAQSNHHCHAQKGPDSH 62
>VP40_HCMVA (P16753) Capsid protein P40 [Contains: Assemblin (Protease) (EC| 3.4.21.97); Capsid assembly protein; Gene UL80 protein; Gene UL80.5 protein; C-terminal peptide] Length = 708 Score = 29.3 bits (64), Expect = 4.8 Identities = 20/94 (21%), Positives = 43/94 (45%), Gaps = 3/94 (3%) Frame = +1 Query: 172 LSAPNSIRSK*TRRNCYHFTSSDNGSGGRTNDVKSAKETFEVRLLQEVASAISKDFLT-- 345 LS P R+ +SD GSGG + ++ ++ L++ + +D Sbjct: 527 LSFPGEAEHGRARKRLKSHVNSDGGSGGHAGSNQQQQQRYDE--LRDAIHELKRDLFAAR 584 Query: 346 -FFTDIALSLPSSSTLAMTSSVIRWTTGKVFHSG 444 T ++ +LPS+++ + T++ + TG++ G Sbjct: 585 QSSTLLSAALPSAASSSPTTTTVCTPTGELTSGG 618
>GPDA_BARQU (Q6G0U8) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 340 Score = 28.9 bits (63), Expect = 6.3 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 8/59 (13%) Frame = +1 Query: 298 RLLQEVASAISKDFL--------TFFTDIALSLPSSSTLAMTSSVIRWTTGKVFHSGTS 450 RLLQEVA I D + TF ++A+ LP++ T+A +++ ++FH S Sbjct: 116 RLLQEVAREILGDKIPLAIFSGPTFAKELAIGLPTAITVAASNAEFSEELQQLFHCDKS 174
>YMF11_MARPO (P38456) Hypothetical 83.1 kDa protein in COB-ATPA intergenic| region (ORF 732) Length = 732 Score = 28.9 bits (63), Expect = 6.3 Identities = 13/35 (37%), Positives = 21/35 (60%) Frame = +3 Query: 60 LSQEQYKTSTLRYRQTTFAGTLLAQTIIHEIDVYV 164 L Q++ KTS + T G LL ++HE+D++V Sbjct: 326 LVQKEIKTSLRAGAEGTGVGPLLCNIVLHELDLFV 360
>GPDA_BARHE (Q6G518) Glycerol-3-phosphate dehydrogenase [NAD(P)+] (EC 1.1.1.94)| (NAD(P)H-dependent glycerol-3-phosphate dehydrogenase) Length = 340 Score = 28.5 bits (62), Expect = 8.2 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 8/55 (14%) Frame = +1 Query: 298 RLLQEVASAISKDFL--------TFFTDIALSLPSSSTLAMTSSVIRWTTGKVFH 438 RLLQEVA I D + TF ++A+ LP++ T+A + + ++FH Sbjct: 116 RLLQEVAREILGDKIPLAVFSGPTFAKELAIGLPTAITIAASDTEFSEELQQLFH 170 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,906,252 Number of Sequences: 219361 Number of extensions: 1037846 Number of successful extensions: 2836 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 2761 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2830 length of database: 80,573,946 effective HSP length: 102 effective length of database: 58,199,124 effective search space used: 2793557952 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)