ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart42c02
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Clas... 62 3e-10
2XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Clas... 50 1e-06
3XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Clas... 42 5e-04
4CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (E... 39 0.004
5CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14) 37 0.009
6CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14) 33 0.14
7CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14) 33 0.14
8CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14) 33 0.18
9HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.... 30 1.5
10CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14) 30 1.5
11CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14) 28 4.4
12CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1... 28 5.7
13LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precurso... 28 5.7
14XKR6_TETNG (Q49LS8) XK-related protein 6 28 7.5
15CONB_CANEN (P49347) Concanavalin B precursor (Con B) 28 7.5
16RIPK3_HUMAN (Q9Y572) Receptor-interacting serine/threonine-prote... 27 9.8
17ZNF22_RAT (Q9ERU2) Zinc finger protein 22 (Kruppel-type zinc fin... 27 9.8
18UVRA_DEIRA (Q46577) UvrABC system protein A (UvrA protein) (Exci... 27 9.8
19CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14) 27 9.8
20CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14) 27 9.8
21MICA2_HUMAN (O94851) Protein MICAL-2 27 9.8

>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog) (XIP-I protein)
          Length = 304

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 26/46 (56%), Positives = 35/46 (76%)
 Frame = -3

Query: 326 ASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERFEAKRTNYSS 189
           A ++   +VHPKN+YYGV  V QK  NYGG+M+W+R+  K+TNYSS
Sbjct: 253 ADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSS 298



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>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III|
           chitinase homolog a) (RIXI protein)
          Length = 304

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 21/41 (51%), Positives = 27/41 (65%)
 Frame = -3

Query: 293 KNLYYGVIQVVQKAANYGGVMVWERFEAKRTNYSSYAIQWA 171
           K LYY ++  VQKA NYGG+M+W+RF  K+T Y      WA
Sbjct: 264 KQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304



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>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III|
           chitinase homolog h)
          Length = 290

 Score = 41.6 bits (96), Expect = 5e-04
 Identities = 16/43 (37%), Positives = 29/43 (67%)
 Frame = -3

Query: 320 EQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERFEAKRTNYS 192
           EQ   ++  K+LYY ++Q V+   NYGG+ +++R+  K+ NY+
Sbjct: 245 EQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287



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>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);|
           Lysozyme (EC 3.2.1.17)]
          Length = 311

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 16/40 (40%), Positives = 24/40 (60%)
 Frame = -3

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERFEAKRTNYSS 189
           GYV P  L   ++  ++K+  YGGVM+W +F   +  YSS
Sbjct: 254 GYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSS 293



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>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 302

 Score = 37.4 bits (85), Expect = 0.009
 Identities = 15/40 (37%), Positives = 24/40 (60%)
 Frame = -3

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERFEAKRTNYSS 189
           GY+ P  L   ++  ++K+  YGGVM+W +F   +  YSS
Sbjct: 257 GYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSS 296



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>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 301

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 12/40 (30%), Positives = 25/40 (62%)
 Frame = -3

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERFEAKRTNYSS 189
           G++    L   ++ V++++  YGGVM+W ++   ++ YSS
Sbjct: 256 GFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSS 295



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>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 298

 Score = 33.5 bits (75), Expect = 0.14
 Identities = 14/43 (32%), Positives = 25/43 (58%)
 Frame = -3

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERFEAKRTNYSSYAI 180
           G++    L   V+  ++ ++ YGGVM+W+RF   ++ YS   I
Sbjct: 253 GFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAII 295



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>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 293

 Score = 33.1 bits (74), Expect = 0.18
 Identities = 11/29 (37%), Positives = 20/29 (68%)
 Frame = -3

Query: 275 VIQVVQKAANYGGVMVWERFEAKRTNYSS 189
           V+  ++ +  YGGVM+W+RF   ++ YS+
Sbjct: 259 VLPAIKTSPKYGGVMIWDRFNDAQSGYSN 287



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>HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.6.1.9)|
           (Imidazole acetol-phosphate transaminase)
          Length = 350

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -3

Query: 326 ASEQKVGYVHPKNLYYGVIQVVQKA 252
           A  +++GYVHP   YYG +  VQ A
Sbjct: 102 AEGEEIGYVHPSYSYYGTLAEVQGA 126



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>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)|
          Length = 294

 Score = 30.0 bits (66), Expect = 1.5
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -3

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERFEAKRTNYSS 189
           GY+  + L   V+  ++ ++ YGGVM+W R    +  YSS
Sbjct: 249 GYIPKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSS 288



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>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 292

 Score = 28.5 bits (62), Expect = 4.4
 Identities = 10/30 (33%), Positives = 19/30 (63%)
 Frame = -3

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWER 219
           G++    L   V+  ++ ++NYGGVM+W +
Sbjct: 248 GFIPADVLISQVLPTIKASSNYGGVMLWSK 277



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>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)|
          Length = 293

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 14/40 (35%), Positives = 23/40 (57%)
 Frame = -3

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERFEAKRTNYSS 189
           G++    L   V+  ++ +A YGGVM+W +  A  + YSS
Sbjct: 250 GFIPADALTSQVLPTIKGSAKYGGVMLWSK--AYDSGYSS 287



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>LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precursor (LDL receptor|
           1)
          Length = 909

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 299 HPKNLYYGVIQVVQKAANYGGVMVWERFEAKRTN 198
           HP  LY  +  V+     +GG +VW+ +  K TN
Sbjct: 834 HPTALYIVLPIVILCLVAFGGFLVWKNWRLKNTN 867



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>XKR6_TETNG (Q49LS8) XK-related protein 6|
          Length = 578

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +2

Query: 116 YTDGYNKSTRGRSERRRVKPIGWRNCCNLSAW 211
           YT G   S  G S RR    +    CC LS W
Sbjct: 143 YTGGGLGSVEGLSSRRAAASLQRDKCCRLSVW 174



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>CONB_CANEN (P49347) Concanavalin B precursor (Con B)|
          Length = 324

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
 Frame = -3

Query: 329 PASEQKV---GYVHPKNLYYGVIQVVQKA-ANYGGVMVWERFEAKRTNYSSYAIQW 174
           PAS+      GY+ P  L   V+  +      Y G+ +W R   K T YS+  I++
Sbjct: 252 PASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307



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>RIPK3_HUMAN (Q9Y572) Receptor-interacting serine/threonine-protein kinase 3 (EC|
           2.7.11.1) (RIP-like protein kinase 3)
           (Receptor-interacting protein 3) (RIP-3)
          Length = 518

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 20/73 (27%), Positives = 29/73 (39%)
 Frame = +2

Query: 20  VSRFIIGYKAHNFTLAILIHWKGSKHMHMHMQYTDGYNKSTRGRSERRRVKPIGWRNCCN 199
           V  F+   K+ N   +I    +G   M       DG+ ++   +  R  V    W N  N
Sbjct: 301 VKDFLSQLKSSNRRFSIPESGQGGTEM-------DGFRRTIENQHSRNDVMVSEWLNKLN 353

Query: 200 LSAWPRNVPKP*P 238
           L   P +VPK  P
Sbjct: 354 LEEPPSSVPKKCP 366



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>ZNF22_RAT (Q9ERU2) Zinc finger protein 22 (Kruppel-type zinc finger protein|
           Krox-25)
          Length = 237

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +2

Query: 89  SKHMHMHMQYTDGYNKSTRGRSERRRVKPIGWR 187
           S H+  HM+         RG++ R +  P+ W+
Sbjct: 179 SSHLRQHMKVHKEKKSHKRGKNARAKTHPVSWK 211



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>UVRA_DEIRA (Q46577) UvrABC system protein A (UvrA protein) (Excinuclease ABC|
           subunit A)
          Length = 1016

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = -2

Query: 315 EGRL-RSSKEPLLRRHTGGA--EGGQLWRGHGLGTF 217
           EG L  ++ EP L+RHTGG     G L   + LGTF
Sbjct: 456 EGELDHAAIEPFLKRHTGGTAKAHGPLHYEYDLGTF 491



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>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)|
          Length = 291

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERF 216
           G++    L   V+ ++  +  YGGVM+W +F
Sbjct: 248 GFIPSDVLVSQVLPLINGSPKYGGVMLWSKF 278



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>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)|
          Length = 542

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 13/33 (39%), Positives = 18/33 (54%)
 Frame = -3

Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERFEA 210
           GYV    L   V  +  K ++YGGV VW+  +A
Sbjct: 265 GYVPMSTLQTIVPSLASKYSSYGGVSVWDASQA 297



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>MICA2_HUMAN (O94851) Protein MICAL-2|
          Length = 1124

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%)
 Frame = +2

Query: 89  SKHMHMHMQYTDGYNKSTRGRS---ERRRVKPIGWRNCCNLSAWPRNVPKP*PRHSWPPS 259
           +K   M  Q    + +STR  S   + RRV  IG    C+ S  P +   P P  + P  
Sbjct: 713 NKVKSMANQLLAKFEESTRNPSLMKQERRVSGIGKPVLCSSSGPPVHSCCPKPEEATPSP 772

Query: 260 APPV*RR 280
           +PP+ R+
Sbjct: 773 SPPLKRQ 779


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,722,364
Number of Sequences: 219361
Number of extensions: 985749
Number of successful extensions: 3151
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 3026
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3149
length of database: 80,573,946
effective HSP length: 85
effective length of database: 61,928,261
effective search space used: 1486278264
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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