Clone Name | rbart42c02 |
---|---|
Clone Library Name | barley_pub |
>XIP1_WHEAT (Q8L5C6) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog) (XIP-I protein) Length = 304 Score = 62.4 bits (150), Expect = 3e-10 Identities = 26/46 (56%), Positives = 35/46 (76%) Frame = -3 Query: 326 ASEQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERFEAKRTNYSS 189 A ++ +VHPKN+YYGV V QK NYGG+M+W+R+ K+TNYSS Sbjct: 253 ADDKSHQWVHPKNVYYGVAPVAQKKDNYGGIMLWDRYFDKQTNYSS 298
>XIP1_ORYSA (Q7GCM7) Xylanase inhibitor protein 1 precursor (Class III| chitinase homolog a) (RIXI protein) Length = 304 Score = 50.4 bits (119), Expect = 1e-06 Identities = 21/41 (51%), Positives = 27/41 (65%) Frame = -3 Query: 293 KNLYYGVIQVVQKAANYGGVMVWERFEAKRTNYSSYAIQWA 171 K LYY ++ VQKA NYGG+M+W+RF K+T Y WA Sbjct: 264 KQLYYDLLPNVQKAKNYGGIMLWDRFYDKQTGYGKTVKYWA 304
>XIP2_ORYSA (Q53NL5) Xylanase inhibitor protein 2 precursor (Class III| chitinase homolog h) Length = 290 Score = 41.6 bits (96), Expect = 5e-04 Identities = 16/43 (37%), Positives = 29/43 (67%) Frame = -3 Query: 320 EQKVGYVHPKNLYYGVIQVVQKAANYGGVMVWERFEAKRTNYS 192 EQ ++ K+LYY ++Q V+ NYGG+ +++R+ K+ NY+ Sbjct: 245 EQDSAWMFQKDLYYEMLQFVRSLPNYGGLAIYDRYFDKKANYT 287
>CHLY_HEVBR (P23472) Hevamine-A precursor [Includes: Chitinase (EC 3.2.1.14);| Lysozyme (EC 3.2.1.17)] Length = 311 Score = 38.5 bits (88), Expect = 0.004 Identities = 16/40 (40%), Positives = 24/40 (60%) Frame = -3 Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERFEAKRTNYSS 189 GYV P L ++ ++K+ YGGVM+W +F + YSS Sbjct: 254 GYVPPDVLISRILPEIKKSPKYGGVMLWSKFYDDKNGYSS 293
>CHIA_ARATH (P19172) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 302 Score = 37.4 bits (85), Expect = 0.009 Identities = 15/40 (37%), Positives = 24/40 (60%) Frame = -3 Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERFEAKRTNYSS 189 GY+ P L ++ ++K+ YGGVM+W +F + YSS Sbjct: 257 GYIPPDVLTSQILPTLKKSRKYGGVMLWSKFWDDKNGYSS 296
>CHIT3_VITVI (P51614) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 301 Score = 33.5 bits (75), Expect = 0.14 Identities = 12/40 (30%), Positives = 25/40 (62%) Frame = -3 Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERFEAKRTNYSS 189 G++ L ++ V++++ YGGVM+W ++ ++ YSS Sbjct: 256 GFIPANVLTSQILPVIKRSPKYGGVMLWSKYYDDQSGYSS 295
>CHIA_PHAAN (P29024) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 298 Score = 33.5 bits (75), Expect = 0.14 Identities = 14/43 (32%), Positives = 25/43 (58%) Frame = -3 Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERFEAKRTNYSSYAI 180 G++ L V+ ++ ++ YGGVM+W+RF ++ YS I Sbjct: 253 GFIPADVLTSQVLPTIKGSSKYGGVMLWDRFNDGQSGYSGAII 295
>CHIA_CICAR (P36908) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 293 Score = 33.1 bits (74), Expect = 0.18 Identities = 11/29 (37%), Positives = 20/29 (68%) Frame = -3 Query: 275 VIQVVQKAANYGGVMVWERFEAKRTNYSS 189 V+ ++ + YGGVM+W+RF ++ YS+ Sbjct: 259 VLPAIKTSPKYGGVMIWDRFNDAQSGYSN 287
>HIS8_GEOMG (Q39YP6) Histidinol-phosphate aminotransferase (EC 2.6.1.9)| (Imidazole acetol-phosphate transaminase) Length = 350 Score = 30.0 bits (66), Expect = 1.5 Identities = 12/25 (48%), Positives = 16/25 (64%) Frame = -3 Query: 326 ASEQKVGYVHPKNLYYGVIQVVQKA 252 A +++GYVHP YYG + VQ A Sbjct: 102 AEGEEIGYVHPSYSYYGTLAEVQGA 126
>CHIB_TOBAC (P29061) Basic endochitinase precursor (EC 3.2.1.14)| Length = 294 Score = 30.0 bits (66), Expect = 1.5 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = -3 Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERFEAKRTNYSS 189 GY+ + L V+ ++ ++ YGGVM+W R + YSS Sbjct: 249 GYIPKQVLMSQVLPFLKGSSKYGGVMLWNRKFDVQCGYSS 288
>CHIA_CUCSA (P17541) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 292 Score = 28.5 bits (62), Expect = 4.4 Identities = 10/30 (33%), Positives = 19/30 (63%) Frame = -3 Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWER 219 G++ L V+ ++ ++NYGGVM+W + Sbjct: 248 GFIPADVLISQVLPTIKASSNYGGVMLWSK 277
>CHIE_BETVU (P36910) Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Length = 293 Score = 28.1 bits (61), Expect = 5.7 Identities = 14/40 (35%), Positives = 23/40 (57%) Frame = -3 Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERFEAKRTNYSS 189 G++ L V+ ++ +A YGGVM+W + A + YSS Sbjct: 250 GFIPADALTSQVLPTIKGSAKYGGVMLWSK--AYDSGYSS 287
>LDLR1_XENLA (Q99087) Low-density lipoprotein receptor 1 precursor (LDL receptor| 1) Length = 909 Score = 28.1 bits (61), Expect = 5.7 Identities = 12/34 (35%), Positives = 18/34 (52%) Frame = -3 Query: 299 HPKNLYYGVIQVVQKAANYGGVMVWERFEAKRTN 198 HP LY + V+ +GG +VW+ + K TN Sbjct: 834 HPTALYIVLPIVILCLVAFGGFLVWKNWRLKNTN 867
>XKR6_TETNG (Q49LS8) XK-related protein 6| Length = 578 Score = 27.7 bits (60), Expect = 7.5 Identities = 13/32 (40%), Positives = 14/32 (43%) Frame = +2 Query: 116 YTDGYNKSTRGRSERRRVKPIGWRNCCNLSAW 211 YT G S G S RR + CC LS W Sbjct: 143 YTGGGLGSVEGLSSRRAAASLQRDKCCRLSVW 174
>CONB_CANEN (P49347) Concanavalin B precursor (Con B)| Length = 324 Score = 27.7 bits (60), Expect = 7.5 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 4/56 (7%) Frame = -3 Query: 329 PASEQKV---GYVHPKNLYYGVIQVVQKA-ANYGGVMVWERFEAKRTNYSSYAIQW 174 PAS+ GY+ P L V+ + Y G+ +W R K T YS+ I++ Sbjct: 252 PASQATAPGGGYIPPSALIGQVLPYLPDLQTRYAGIALWNRQADKETGYSTNIIRY 307
>RIPK3_HUMAN (Q9Y572) Receptor-interacting serine/threonine-protein kinase 3 (EC| 2.7.11.1) (RIP-like protein kinase 3) (Receptor-interacting protein 3) (RIP-3) Length = 518 Score = 27.3 bits (59), Expect = 9.8 Identities = 20/73 (27%), Positives = 29/73 (39%) Frame = +2 Query: 20 VSRFIIGYKAHNFTLAILIHWKGSKHMHMHMQYTDGYNKSTRGRSERRRVKPIGWRNCCN 199 V F+ K+ N +I +G M DG+ ++ + R V W N N Sbjct: 301 VKDFLSQLKSSNRRFSIPESGQGGTEM-------DGFRRTIENQHSRNDVMVSEWLNKLN 353 Query: 200 LSAWPRNVPKP*P 238 L P +VPK P Sbjct: 354 LEEPPSSVPKKCP 366
>ZNF22_RAT (Q9ERU2) Zinc finger protein 22 (Kruppel-type zinc finger protein| Krox-25) Length = 237 Score = 27.3 bits (59), Expect = 9.8 Identities = 9/33 (27%), Positives = 16/33 (48%) Frame = +2 Query: 89 SKHMHMHMQYTDGYNKSTRGRSERRRVKPIGWR 187 S H+ HM+ RG++ R + P+ W+ Sbjct: 179 SSHLRQHMKVHKEKKSHKRGKNARAKTHPVSWK 211
>UVRA_DEIRA (Q46577) UvrABC system protein A (UvrA protein) (Excinuclease ABC| subunit A) Length = 1016 Score = 27.3 bits (59), Expect = 9.8 Identities = 17/36 (47%), Positives = 21/36 (58%), Gaps = 3/36 (8%) Frame = -2 Query: 315 EGRL-RSSKEPLLRRHTGGA--EGGQLWRGHGLGTF 217 EG L ++ EP L+RHTGG G L + LGTF Sbjct: 456 EGELDHAAIEPFLKRHTGGTAKAHGPLHYEYDLGTF 491
>CHIA_TOBAC (P29060) Acidic endochitinase precursor (EC 3.2.1.14)| Length = 291 Score = 27.3 bits (59), Expect = 9.8 Identities = 10/31 (32%), Positives = 18/31 (58%) Frame = -3 Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERF 216 G++ L V+ ++ + YGGVM+W +F Sbjct: 248 GFIPSDVLVSQVLPLINGSPKYGGVMLWSKF 278
>CHI2_RHIOL (P29027) Chitinase 2 precursor (EC 3.2.1.14)| Length = 542 Score = 27.3 bits (59), Expect = 9.8 Identities = 13/33 (39%), Positives = 18/33 (54%) Frame = -3 Query: 308 GYVHPKNLYYGVIQVVQKAANYGGVMVWERFEA 210 GYV L V + K ++YGGV VW+ +A Sbjct: 265 GYVPMSTLQTIVPSLASKYSSYGGVSVWDASQA 297
>MICA2_HUMAN (O94851) Protein MICAL-2| Length = 1124 Score = 27.3 bits (59), Expect = 9.8 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 3/67 (4%) Frame = +2 Query: 89 SKHMHMHMQYTDGYNKSTRGRS---ERRRVKPIGWRNCCNLSAWPRNVPKP*PRHSWPPS 259 +K M Q + +STR S + RRV IG C+ S P + P P + P Sbjct: 713 NKVKSMANQLLAKFEESTRNPSLMKQERRVSGIGKPVLCSSSGPPVHSCCPKPEEATPSP 772 Query: 260 APPV*RR 280 +PP+ R+ Sbjct: 773 SPPLKRQ 779 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 50,722,364 Number of Sequences: 219361 Number of extensions: 985749 Number of successful extensions: 3151 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 3026 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3149 length of database: 80,573,946 effective HSP length: 85 effective length of database: 61,928,261 effective search space used: 1486278264 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)