ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart42b07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AC122143.2| Oryza sativa (japonica cultivar-group) chromosome... 54 4e-04
2dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 54 4e-04
3gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 54 4e-04
4ref|NM_187964.1| Oryza sativa (japonica cultivar-group), Ozsa838... 50 0.007
5ref|NM_187960.1| Oryza sativa (japonica cultivar-group), Ozsa838... 50 0.007
6dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
7dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
8dbj|AP001366.1| Oryza sativa (japonica cultivar-group) genomic D... 50 0.007
9emb|BX897690.13| Zebrafish DNA sequence from clone CH211-197O9 i... 46 0.10
10gb|AC090711.3| Homo sapiens chromosome 8 clone RP11-89H1 map 8q2... 44 0.41
11gb|AC087110.3| Homo sapiens chromosome 8, clone CTD-2033B22, com... 44 0.41
12dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
13gb|AC106743.4| Homo sapiens chromosome 16 clone RP11-116D9, comp... 44 0.41
14dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.41
15emb|AL451005.9| Human DNA sequence from clone RP11-92B10 on chro... 42 1.6
16gb|AC021325.5|AC021325 Homo sapiens chromosome , clone RP11-23N1... 42 1.6
17gb|AF246419.1|AF246419 Acidithiobacillus ferroxidans aspartate a... 42 1.6
18emb|AL928801.6| Mouse DNA sequence from clone RP23-116P4 on chro... 42 1.6
19gb|AC115031.11| Mus musculus chromosome 3, clone RP24-257J5, com... 42 1.6
20gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome 40 6.3
21gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome 40 6.3
22ref|NM_032037.2| Homo sapiens testis-specific serine kinase 6 (T... 40 6.3
23ref|XM_477237.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.3
24gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
25gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 6.3
26gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 6.3
27emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 40 6.3
28ref|XM_643073.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 6.3
29gb|AE014075.1| Escherichia coli CFT073, complete genome 40 6.3
30gb|CP000243.1| Escherichia coli UTI89, complete genome 40 6.3
31emb|AL356967.23| Human DNA sequence from clone RP11-427E4 on chr... 40 6.3
32gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
33gb|BC014611.2| Homo sapiens testis-specific serine kinase 6, mRN... 40 6.3
34gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.3
35gb|AC011448.5| Homo sapiens chromosome 19 clone CTC-260F20, comp... 40 6.3
36gb|AC149226.11| Danio rerio clone ch211-252j18, complete sequence 40 6.3
37gb|AE012068.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 6.3
38gb|AC159628.2| Mus musculus BAC clone RP24-206C4 from chromosome... 40 6.3
39gb|AF348077.1|AF348077 Homo sapiens serine/threonine kinase FKSG... 40 6.3
40gb|AY335719.1| Synthetic construct Homo sapiens serine/threonine... 40 6.3
41dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
42gb|AF329483.1| Homo sapiens serine/threonine protein kinase SSTK... 40 6.3
43gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome 40 6.3
44dbj|AK172841.1| Homo sapiens cDNA FLJ24002 fis, clone KAIA4350, ... 40 6.3
45dbj|AK058166.1| Homo sapiens cDNA FLJ25437 fis, clone TST08312 40 6.3
46dbj|AK069089.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
47emb|AL445363.7|CNS07ECY Human chromosome 14 DNA sequence BAC R-6... 40 6.3
48gb|AY110277.1| Zea mays CL615_-1 mRNA sequence 40 6.3
49emb|CR536612.8| Zebrafish DNA sequence from clone DKEY-1O1 in li... 40 6.3
50gb|CP000034.1| Shigella dysenteriae Sd197, complete genome 40 6.3 
>gb|AC122143.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBa0090F16, complete sequence
          Length = 147341

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 69/83 (83%)
 Strand = Plus / Minus

                                                                         
Query: 213   aggtactccgcggtgagaggcttgaagacacgctgctggtctgactctagcgcggccgcg 272
             |||||| |||| ||||||||||||||||  || || | ||| ||||| ||||| ||||| 
Sbjct: 94224 aggtacgccgccgtgagaggcttgaagatgcggtggtcgtcggactccagcgccgccgcc 94165

                                    
Query: 273   aggcgaggccatatgaaggcgct 295
             || || ||||||||| |||||||
Sbjct: 94164 agccgcggccatatgtaggcgct 94142
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                            
Query: 213      aggtactccgcggtgagaggcttgaagacacgctgctggtctgactctagcgcggccgcg 272
                |||||| |||| ||||||||||||||||  || || | ||| ||||| ||||| ||||| 
Sbjct: 24728264 aggtacgccgccgtgagaggcttgaagatgcggtggtcgtcggactccagcgccgccgcc 24728323

                                       
Query: 273      aggcgaggccatatgaaggcgct 295
                || || ||||||||| |||||||
Sbjct: 24728324 agccgcggccatatgtaggcgct 24728346
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                            
Query: 213      aggtactccgcggtgagaggcttgaagacacgctgctggtctgactctagcgcggccgcg 272
                |||||| |||| ||||||||||||||||  || || | ||| ||||| ||||| ||||| 
Sbjct: 25039934 aggtacgccgccgtgagaggcttgaagatgcggtggtcgtcggactccagcgccgccgcc 25039993

                                       
Query: 273      aggcgaggccatatgaaggcgct 295
                || || ||||||||| |||||||
Sbjct: 25039994 agccgcggccatatgtaggcgct 25040016
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>ref|NM_187964.1| Oryza sativa (japonica cultivar-group), Ozsa8384 predicted mRNA
          Length = 1383

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 378  ggcatcgccagcgcggcgtggccgaagccgaagtcggtgtc 418
            |||| ||||| |||||||||||||  |||||||||||||||
Sbjct: 1145 ggcagcgccatcgcggcgtggccgtggccgaagtcggtgtc 1105
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>ref|NM_187960.1| Oryza sativa (japonica cultivar-group), Ozsa8380 predicted mRNA
          Length = 1383

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                     
Query: 378  ggcatcgccagcgcggcgtggccgaagccgaagtcggtgtc 418
            |||| ||||| |||||||||||||  |||||||||||||||
Sbjct: 1145 ggcagcgccatcgcggcgtggccgtggccgaagtcggtgtc 1105
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                        
Query: 378     ggcatcgccagcgcggcgtggccgaagccgaagtcggtgtc 418
               |||| ||||| |||||||||||||  |||||||||||||||
Sbjct: 8835764 ggcagcgccatcgcggcgtggccgtggccgaagtcggtgtc 8835724



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                        
Query: 378     ggcatcgccagcgcggcgtggccgaagccgaagtcggtgtc 418
               |||| ||||| |||||||||||||  |||||||||||||||
Sbjct: 8816128 ggcagcgccatcgcggcgtggccgtggccgaagtcggtgtc 8816168
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>dbj|AP002817.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0699D11
          Length = 140825

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                       
Query: 378    ggcatcgccagcgcggcgtggccgaagccgaagtcggtgtc 418
              |||| ||||| |||||||||||||  |||||||||||||||
Sbjct: 133585 ggcagcgccatcgcggcgtggccgtggccgaagtcggtgtc 133625
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>dbj|AP001366.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0469E09
          Length = 146081

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Minus

                                                      
Query: 378   ggcatcgccagcgcggcgtggccgaagccgaagtcggtgtc 418
             |||| ||||| |||||||||||||  |||||||||||||||
Sbjct: 71792 ggcagcgccatcgcggcgtggccgtggccgaagtcggtgtc 71752



 Score = 50.1 bits (25), Expect = 0.007
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 378   ggcatcgccagcgcggcgtggccgaagccgaagtcggtgtc 418
             |||| ||||| |||||||||||||  |||||||||||||||
Sbjct: 52156 ggcagcgccatcgcggcgtggccgtggccgaagtcggtgtc 52196
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>emb|BX897690.13| Zebrafish DNA sequence from clone CH211-197O9 in linkage group 20,
             complete sequence
          Length = 128296

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 114   aacatggatgcatttggatttgc 136
             |||||||||||||||||||||||
Sbjct: 47497 aacatggatgcatttggatttgc 47475



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 117   atggatgcatttggatttgc 136
             ||||||||||||||||||||
Sbjct: 46879 atggatgcatttggatttgc 46860
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>gb|AC090711.3| Homo sapiens chromosome 8 clone RP11-89H1 map 8q21-q23, complete
             sequence
          Length = 153053

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                           
Query: 25    atttattcaatggagaaacttttacaactc 54
             |||| ||||||||| |||||||||||||||
Sbjct: 35388 attttttcaatggaaaaacttttacaactc 35359
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>gb|AC087110.3| Homo sapiens chromosome 8, clone CTD-2033B22, complete sequence
          Length = 145544

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 25    atttattcaatggagaaacttttacaactc 54
             |||| ||||||||| |||||||||||||||
Sbjct: 84355 attttttcaatggaaaaacttttacaactc 84384
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                         
Query: 378     ggcatcgccagcgcggcgtggccgaagccgaagtcggtgtcg 419
               ||||| || ||||| || |||||||| |||||||||||||||
Sbjct: 8092349 ggcatggcgagcgccgcctggccgaacccgaagtcggtgtcg 8092308



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                               
Query: 210     ccaaggtactccgcggtgagaggcttgaagac 241
               ||||| ||| |||| |||||||||||||||||
Sbjct: 8092508 ccaagatacgccgccgtgagaggcttgaagac 8092477
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>gb|AC106743.4| Homo sapiens chromosome 16 clone RP11-116D9, complete sequence
          Length = 117710

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 133   ttgcaggagaagaattaatttagaga 158
             ||||||||| ||||||||||||||||
Sbjct: 92650 ttgcaggaggagaattaatttagaga 92675
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>dbj|AP003738.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1058_C08
          Length = 117923

 Score = 44.1 bits (22), Expect = 0.41
 Identities = 37/42 (88%)
 Strand = Plus / Minus

                                                       
Query: 378   ggcatcgccagcgcggcgtggccgaagccgaagtcggtgtcg 419
             ||||| || ||||| || |||||||| |||||||||||||||
Sbjct: 26121 ggcatggcgagcgccgcctggccgaacccgaagtcggtgtcg 26080



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 210   ccaaggtactccgcggtgagaggcttgaagac 241
             ||||| ||| |||| |||||||||||||||||
Sbjct: 26280 ccaagatacgccgccgtgagaggcttgaagac 26249
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>emb|AL451005.9| Human DNA sequence from clone RP11-92B10 on chromosome X Contains the
             5' end of a variant of the CUL4B gene for cullin 4B and
             the 5' end of a variant of the gene for MCT-1 protein
             (MCT-1), complete sequence
          Length = 26768

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 300   atccacgttcctgggtttccc 320
             |||||||||||||||||||||
Sbjct: 17593 atccacgttcctgggtttccc 17573
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>gb|AC021325.5|AC021325 Homo sapiens chromosome , clone RP11-23N15, complete sequence
          Length = 180568

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 146   attaatttagagacgaggtct 166
             |||||||||||||||||||||
Sbjct: 27684 attaatttagagacgaggtct 27664
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>gb|AF246419.1|AF246419 Acidithiobacillus ferroxidans aspartate aminotransferase gene,
           partial sequence
          Length = 1602

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 390 gcggcgtggccgaagccgaag 410
           |||||||||||||||||||||
Sbjct: 732 gcggcgtggccgaagccgaag 752
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>emb|AL928801.6| Mouse DNA sequence from clone RP23-116P4 on chromosome 2, complete
             sequence
          Length = 132674

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 127   ttggatttgcaggagaagaattaat 151
             ||||||||| |||||||||||||||
Sbjct: 28242 ttggatttggaggagaagaattaat 28266
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>gb|AC115031.11| Mus musculus chromosome 3, clone RP24-257J5, complete sequence
          Length = 170460

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 30     ttcaatggagaaacttttacaactc 54
              ||||||||| |||||||||||||||
Sbjct: 151426 ttcaatggaaaaacttttacaactc 151402
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>gb|AE005674.1| Shigella flexneri 2a str. 301, complete genome
          Length = 4607203

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 376     ccggcatcgccagcgcggcg 395
               ||||||||||||||||||||
Sbjct: 3198311 ccggcatcgccagcgcggcg 3198292
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>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome
          Length = 3730232

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 343     accccgtgcacagcctgccg 362
               ||||||||||||||||||||
Sbjct: 3446202 accccgtgcacagcctgccg 3446221
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>ref|NM_032037.2| Homo sapiens testis-specific serine kinase 6 (TSSK6), mRNA
          Length = 1442

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 397 ggccgaagccgaagtcggtg 416
           ||||||||||||||||||||
Sbjct: 708 ggccgaagccgaagtcggtg 689
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>ref|XM_477237.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1047

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 210  ccaaggtactccgcggtgagaggcttgaagac 241
            ||||| ||| |||| |||||||||||||||||
Sbjct: 1037 ccaagatacgccgccgtgagaggcttgaagac 1006
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>gb|AC148611.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1007D10,
             complete sequence
          Length = 153366

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    tttatttattcaatggagaa 41
             ||||||||||||||||||||
Sbjct: 63221 tttatttattcaatggagaa 63240
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>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 404     gccgaagtcggtgtcgttgg 423
               ||||||||||||||||||||
Sbjct: 5901628 gccgaagtcggtgtcgttgg 5901609
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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 404    gccgaagtcggtgtcgttgg 423
              ||||||||||||||||||||
Sbjct: 486896 gccgaagtcggtgtcgttgg 486877
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>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 404     gccgaagtcggtgtcgttgg 423
               ||||||||||||||||||||
Sbjct: 4907524 gccgaagtcggtgtcgttgg 4907543
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>ref|XM_643073.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (528.t00001)
           partial mRNA
          Length = 2586

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 125 atttggatttgcaggagaag 144
           ||||||||||||||||||||
Sbjct: 345 atttggatttgcaggagaag 364
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>gb|AE014075.1| Escherichia coli CFT073, complete genome
          Length = 5231428

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 376     ccggcatcgccagcgcggcg 395
               ||||||||||||||||||||
Sbjct: 3649866 ccggcatcgccagcgcggcg 3649847
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>gb|CP000243.1| Escherichia coli UTI89, complete genome
          Length = 5065741

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 376     ccggcatcgccagcgcggcg 395
               ||||||||||||||||||||
Sbjct: 3437082 ccggcatcgccagcgcggcg 3437063
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>emb|AL356967.23| Human DNA sequence from clone RP11-427E4 on chromosome 6 Contains a
             novel pseudogene, complete sequence
          Length = 163869

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 29    attcaatggagaaactttta 48
             ||||||||||||||||||||
Sbjct: 39215 attcaatggagaaactttta 39196
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>gb|AC093489.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1116_A10,
             complete sequence
          Length = 102275

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    tttatttattcaatggagaa 41
             ||||||||||||||||||||
Sbjct: 62061 tttatttattcaatggagaa 62080
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>gb|BC014611.2| Homo sapiens testis-specific serine kinase 6, mRNA (cDNA clone
           MGC:26987 IMAGE:4826305), complete cds
          Length = 1345

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 397 ggccgaagccgaagtcggtg 416
           ||||||||||||||||||||
Sbjct: 596 ggccgaagccgaagtcggtg 577
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 404     gccgaagtcggtgtcgttgg 423
               ||||||||||||||||||||
Sbjct: 6570044 gccgaagtcggtgtcgttgg 6570025
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>gb|AC011448.5| Homo sapiens chromosome 19 clone CTC-260F20, complete sequence
          Length = 165122

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 397   ggccgaagccgaagtcggtg 416
             ||||||||||||||||||||
Sbjct: 77052 ggccgaagccgaagtcggtg 77071
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>gb|AC149226.11| Danio rerio clone ch211-252j18, complete sequence
          Length = 154059

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     gaaggcaaactggagcttta 25
             ||||||||||||||||||||
Sbjct: 69953 gaaggcaaactggagcttta 69972
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>gb|AE012068.1| Xanthomonas axonopodis pv. citri str. 306,  section 446 of 469 of the
            complete genome
          Length = 10884

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 404  gccgaagtcggtgtcgttgg 423
            ||||||||||||||||||||
Sbjct: 5223 gccgaagtcggtgtcgttgg 5242
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>gb|AC159628.2| Mus musculus BAC clone RP24-206C4 from chromosome 12, complete sequence
          Length = 161791

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 7     aaggcaaactggagctttat 26
             ||||||||||||||||||||
Sbjct: 64903 aaggcaaactggagctttat 64884
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>gb|AF348077.1|AF348077 Homo sapiens serine/threonine kinase FKSG82 (FKSG82) mRNA, complete
           cds
          Length = 1467

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 397 ggccgaagccgaagtcggtg 416
           ||||||||||||||||||||
Sbjct: 733 ggccgaagccgaagtcggtg 714
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>gb|AY335719.1| Synthetic construct Homo sapiens serine/threonine protein kinase
           SSTK (SSTK) mRNA, partial cds
          Length = 822

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 397 ggccgaagccgaagtcggtg 416
           ||||||||||||||||||||
Sbjct: 475 ggccgaagccgaagtcggtg 456
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 22      tttatttattcaatggagaa 41
               ||||||||||||||||||||
Sbjct: 5376547 tttatttattcaatggagaa 5376566
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>gb|AF329483.1| Homo sapiens serine/threonine protein kinase SSTK (SSTK) mRNA,
           complete cds
          Length = 1554

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 397 ggccgaagccgaagtcggtg 416
           ||||||||||||||||||||
Sbjct: 597 ggccgaagccgaagtcggtg 578
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>gb|AE014073.1| Shigella flexneri 2a str. 2457T, complete genome
          Length = 4599354

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 376     ccggcatcgccagcgcggcg 395
               ||||||||||||||||||||
Sbjct: 3186973 ccggcatcgccagcgcggcg 3186954
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>dbj|AK172841.1| Homo sapiens cDNA FLJ24002 fis, clone KAIA4350, highly similar to
            Homo sapiens serine/threonine protein kinase SSTK (SSTK)
          Length = 2535

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 397  ggccgaagccgaagtcggtg 416
            ||||||||||||||||||||
Sbjct: 1077 ggccgaagccgaagtcggtg 1058
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>dbj|AK058166.1| Homo sapiens cDNA FLJ25437 fis, clone TST08312
          Length = 1266

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 397 ggccgaagccgaagtcggtg 416
           ||||||||||||||||||||
Sbjct: 553 ggccgaagccgaagtcggtg 534
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>dbj|AK069089.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023008B14, full
            insert sequence
          Length = 3756

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 22   tttatttattcaatggagaa 41
            ||||||||||||||||||||
Sbjct: 3680 tttatttattcaatggagaa 3699
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>emb|AL445363.7|CNS07ECY Human chromosome 14 DNA sequence BAC R-671J11 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 181987

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 147    ttaatttagagacgaggtct 166
              ||||||||||||||||||||
Sbjct: 120425 ttaatttagagacgaggtct 120406
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>gb|AY110277.1| Zea mays CL615_-1 mRNA sequence
          Length = 982

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 288 aaggcgctgatgatccacgt 307
           ||||||||||||||||||||
Sbjct: 617 aaggcgctgatgatccacgt 636
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>emb|CR536612.8| Zebrafish DNA sequence from clone DKEY-1O1 in linkage group 15,
             complete sequence
          Length = 224998

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     gaaggcaaactggagcttta 25
             ||||||||||||||||||||
Sbjct: 25502 gaaggcaaactggagcttta 25483
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>gb|CP000034.1| Shigella dysenteriae Sd197, complete genome
          Length = 4369232

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 376     ccggcatcgccagcgcggcg 395
               ||||||||||||||||||||
Sbjct: 3009575 ccggcatcgccagcgcggcg 3009556


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,491,484
Number of Sequences: 3902068
Number of extensions: 3491484
Number of successful extensions: 70009
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69477
Number of HSP's gapped (non-prelim): 532
length of query: 469
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 447
effective length of database: 17,147,199,772
effective search space: 7664798298084
effective search space used: 7664798298084
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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