>ref|XM_471970.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 360

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                   
Query: 425 acccaggctagcgcgagctgcgacgacgtgcagcccttcctcgccgccatctcgct 480
           ||||| || ||||| |||||||||| ||||||||||||||||| ||||||| ||||
Sbjct: 89  acccacgccagcgccagctgcgacgccgtgcagcccttcctcgtcgccatcacgct 34

>emb|AL606600.3|OSJN00027 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067G20,
              complete sequence
          Length = 145825

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                      
Query: 425    acccaggctagcgcgagctgcgacgacgtgcagcccttcctcgccgccatctcgct 480
              ||||| || ||||| |||||||||| ||||||||||||||||| ||||||| ||||
Sbjct: 104340 acccacgccagcgccagctgcgacgccgtgcagcccttcctcgtcgccatcacgct 104285

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 63.9 bits (32), Expect = 4e-07
 Identities = 50/56 (89%)
 Strand = Plus / Minus

                                                                        
Query: 425      acccaggctagcgcgagctgcgacgacgtgcagcccttcctcgccgccatctcgct 480
                ||||| || ||||| |||||||||| ||||||||||||||||| ||||||| ||||
Sbjct: 16143590 acccacgccagcgccagctgcgacgccgtgcagcccttcctcgtcgccatcacgct 16143535



 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                          
Query: 417      ggtggtgaacccaggctagcgcgagctgcgacgacgtgcagcccttcctcgccgccat 474
                |||| ||||||||||| || |||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 16018300 ggtgatgaacccaggccagtgcgagctgcgacgatgtgcatccctttctcgctgccat 16018243

>ref|XM_471950.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1068

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 417 ggtggtgaacccaggctagcgcgagctgcgacgacgtgcagcccttcctcgccgccat 474
           |||| ||||||||||| || |||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 847 ggtgatgaacccaggccagtgcgagctgcgacgatgtgcatccctttctcgctgccat 790

>emb|AL606625.3|OSJN00039 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0032I19,
              complete sequence
          Length = 145383

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                        
Query: 417    ggtggtgaacccaggctagcgcgagctgcgacgacgtgcagcccttcctcgccgccat 474
              |||| ||||||||||| || |||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 102513 ggtgatgaacccaggccagtgcgagctgcgacgatgtgcatccctttctcgctgccat 102456

>dbj|AK103553.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033132F18, full
           insert sequence
          Length = 1236

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 51/58 (87%)
 Strand = Plus / Minus

                                                                     
Query: 417 ggtggtgaacccaggctagcgcgagctgcgacgacgtgcagcccttcctcgccgccat 474
           |||| ||||||||||| || |||||||||||||| ||||| ||||| ||||| |||||
Sbjct: 899 ggtgatgaacccaggccagtgcgagctgcgacgatgtgcatccctttctcgctgccat 842

>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome
          Length = 2467205

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                    
Query: 427     ccaggctagcgcgagctgcgacgacgtgcagcccttc 463
               |||||| |||||||||||||| | |||||||||||||
Sbjct: 2286522 ccaggccagcgcgagctgcgaggccgtgcagcccttc 2286558

>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                  
Query: 425     acccaggctagcgcgagctgcgacgacgtgcagcc 459
               |||||||| ||||||||||||| || |||||||||
Sbjct: 3703712 acccaggcaagcgcgagctgcgccggcgtgcagcc 3703746

>gb|AY107154.1| Zea mays PCO148860 mRNA sequence
          Length = 1102

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                      
Query: 227 ggggtctcggagtccttccaggtgttg 253
           |||||||| ||||||||||||||||||
Sbjct: 750 ggggtctcagagtccttccaggtgttg 724



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 62/75 (82%)
 Strand = Plus / Minus

                                                                       
Query: 355 cacgttctggttcaaattcccaactttggtcgtgccaggtatggggcgcacatcggttcc 414
           |||||||||||| || ||| | | ||| || || |||||||||||||  |||||| ||||
Sbjct: 625 cacgttctggttgaagttctcgatttttgttgttccaggtatggggcaaacatcgtttcc 566

                          
Query: 415 ccggtggtgaaccca 429
           | | |||||||||||
Sbjct: 565 ctgatggtgaaccca 551

>gb|BT016054.1| Drosophila melanogaster LP17054 full insert cDNA
          Length = 3231

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 239  tccttccaggtgttgaggaac 259
            |||||||||||||||||||||
Sbjct: 2571 tccttccaggtgttgaggaac 2551

>emb|AL157360.8| Human DNA sequence from clone RP11-111C7 on chromosome 13, complete
              sequence
          Length = 148861

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 6      aatacaaaggtatattttagt 26
              |||||||||||||||||||||
Sbjct: 125344 aatacaaaggtatattttagt 125364

>emb|AL079338.16|HSJ841K13 Human DNA sequence from clone RP5-841K13 on chromosome 20 Contains part
             of the gene for a novel protein (LOC284776), complete
             sequence
          Length = 122466

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 107   gcacagagtgctcatgaaattattt 131
             ||||| |||||||||||||||||||
Sbjct: 21866 gcacacagtgctcatgaaattattt 21890

>ref|NM_078691.2| Drosophila melanogaster Adaptin CG12532-RA (Bap), mRNA
          Length = 3235

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 239  tccttccaggtgttgaggaac 259
            |||||||||||||||||||||
Sbjct: 2589 tccttccaggtgttgaggaac 2569

>gb|AY052092.1| Drosophila melanogaster SD04106 full length cDNA
          Length = 2229

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 239  tccttccaggtgttgaggaac 259
            |||||||||||||||||||||
Sbjct: 1565 tccttccaggtgttgaggaac 1545

>gb|AC010671.8|AC010671 Drosophila melanogaster, chromosome X, region 18E-18F, BAC clone
              BACR33M08, complete sequence
          Length = 180263

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 239    tccttccaggtgttgaggaac 259
              |||||||||||||||||||||
Sbjct: 130944 tccttccaggtgttgaggaac 130924

>gb|AC012165.6|AC012165 Drosophila melanogaster, chromosome X, region 18F-18F, BAC clone
             BACR48P17, complete sequence
          Length = 176195

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 239   tccttccaggtgttgaggaac 259
             |||||||||||||||||||||
Sbjct: 14304 tccttccaggtgttgaggaac 14284

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 425     acccaggctagcgcgagctgcgacg 449
               |||||||| ||||||||||||||||
Sbjct: 3449909 acccaggccagcgcgagctgcgacg 3449933

>gb|AE003513.3| Drosophila melanogaster chromosome X, section 65 of 74 of the complete
             sequence
          Length = 207432

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 239   tccttccaggtgttgaggaac 259
             |||||||||||||||||||||
Sbjct: 34443 tccttccaggtgttgaggaac 34423

>gb|AC006198.1|AC006198 Homo sapiens, clone hRPK.3_A_1, complete sequence
          Length = 163410

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 107   gcacagagtgctcatgaaattattt 131
             ||||| |||||||||||||||||||
Sbjct: 98790 gcacacagtgctcatgaaattattt 98766

>emb|X75910.1|DMBA D.melanogaster mRNA for beta-adaptin
          Length = 3217

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 239  tccttccaggtgttgaggaac 259
            |||||||||||||||||||||
Sbjct: 2567 tccttccaggtgttgaggaac 2547

>gb|AY643844.1|AY643842S3 Hordeum vulgare subsp. vulgare clones BAC 799C8 and 122A5 hardness locus
              region
          Length = 160897

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 129    tttgacttgcaaatacttta 148
              ||||||||||||||||||||
Sbjct: 119114 tttgacttgcaaatacttta 119133

>gb|AC111085.11| Mus musculus chromosome 9, clone RP23-146C24, complete sequence
          Length = 220622

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 192    tatccagttaagtggctttc 211
              ||||||||||||||||||||
Sbjct: 166109 tatccagttaagtggctttc 166090

>gb|AC136288.23| Medicago truncatula clone mth2-13o7, complete sequence
          Length = 110437

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   aaattatttgacttgcaaat 142
             ||||||||||||||||||||
Sbjct: 54873 aaattatttgacttgcaaat 54892

>gb|AC134522.9| Medicago truncatula clone mth2-12g4, complete sequence
          Length = 129197

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 123   aaattatttgacttgcaaat 142
             ||||||||||||||||||||
Sbjct: 65133 aaattatttgacttgcaaat 65152

>gb|AC127893.5| Homo sapiens 12 BAC RP11-252G12 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 94971

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 319   catctcctcaaccatgagct 338
             ||||||||||||||||||||
Sbjct: 90429 catctcctcaaccatgagct 90448

>dbj|BS000059.1| Pan troglodytes chromosome 22 clone:RP43-022N17, map 22, complete
             sequences
          Length = 127718

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     tccaaatacaaaggtatatt 21
             ||||||||||||||||||||
Sbjct: 37152 tccaaatacaaaggtatatt 37171

>dbj|AB103466.1| Asparagus officinalis AOGLOB mRNA for MADS-box protein, complete
           cds
          Length = 859

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 114 gtgctcatgaaattatttgacttg 137
           ||||||||||| ||||||||||||
Sbjct: 778 gtgctcatgaacttatttgacttg 801

>emb|AL671400.5| Mouse DNA sequence from clone RP23-109C6 on chromosome X, complete
             sequence
          Length = 188391

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 365   ttcaaattcccaactttggt 384
             ||||||||||||||||||||
Sbjct: 28415 ttcaaattcccaactttggt 28396

>gb|AF124928.1|SCCLAVAM1 Streptomyces clavuligerus Cvm3 (cvm3) gene, partial cds; Cvm2 (cvm2)
            and putative aldo/keto reductase family 2 enzyme (cvm1)
            genes, complete cds; and clavaminate synthase (cas1)
            gene, partial cds
          Length = 2929

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 413  ccccggtggtgaacccaggctagcgcgagctg 444
            ||||||||||| | |||||| |||||||||||
Sbjct: 1209 ccccggtggtgcagccaggcgagcgcgagctg 1240

>emb|AL096870.5|CNS00YVI Human chromosome 14 DNA sequence BAC R-934B9 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 196533

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 124   aattatttgacttgcaaata 143
             ||||||||||||||||||||
Sbjct: 18826 aattatttgacttgcaaata 18845

>dbj|AP001678.1| Homo sapiens genomic DNA, chromosome 21q, section 22/105
          Length = 340000

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 2     tccaaatacaaaggtatatt 21
             ||||||||||||||||||||
Sbjct: 96698 tccaaatacaaaggtatatt 96717

>dbj|AP001256.2| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2, clone:B732H1,
              LL56-APP region, complete sequence
          Length = 204699

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 2      tccaaatacaaaggtatatt 21
              ||||||||||||||||||||
Sbjct: 180118 tccaaatacaaaggtatatt 180137

>dbj|AB017351.1| Acidiphilium rubrum genes for 2-vinyl bacteriochlorophyll hydratase,
            light-independent protochlorophyllide reductase,
            magnesium chelatase, partial and complete cds
          Length = 7482

 Score = 40.1 bits (20), Expect = 6.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 454  gcagcccttcctcgccgcca 473
            ||||||||||||||||||||
Sbjct: 1529 gcagcccttcctcgccgcca 1548


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,686,941
Number of Sequences: 3902068
Number of extensions: 3686941
Number of successful extensions: 67536
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 67398
Number of HSP's gapped (non-prelim): 138
length of query: 480
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 458
effective length of database: 17,147,199,772
effective search space: 7853417495576
effective search space used: 7853417495576
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)