>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  159 bits (80), Expect = 1e-35
 Identities = 167/196 (85%)
 Strand = Plus / Minus

                                                                            
Query: 164      acggagatggtcccggagcacagcaagcacatcggcgcagctgacgactccgactagagc 223
                ||||||||| ||||||||||| ||||| |||||  || |||| |||||||||  ||| ||
Sbjct: 25666560 acggagatgctcccggagcaccgcaagtacatctccgaagctcacgactccggttagcgc 25666501

                                                                            
Query: 224      gccgctgacctcatcgacgacccaaacatgcccgactcggtgcgcgagcgcttgggccat 283
                |||||||||||| ||||||||||| || | ||||||||||||||| || || || |||||
Sbjct: 25666500 gccgctgacctcgtcgacgacccagacgtacccgactcggtgcgcaagagcctgcgccat 25666441

                                                                            
Query: 284      gacggcgaccagcgaactctcagcatgacacgccgccacgtcctccgtcgaccgccaccg 343
                ||| || |||||||| ||| ||||||| || || || ||||||| |||||||| ||||| 
Sbjct: 25666440 gactgccaccagcgagctcccagcatggcatgcggcgacgtccttcgtcgacctccacct 25666381

                                
Query: 344      gaagcttcccgacgac 359
                ||||||||||||||||
Sbjct: 25666380 gaagcttcccgacgac 25666365



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 154/190 (81%)
 Strand = Plus / Plus

                                                                            
Query: 169      gatggtcccggagcacagcaagcacatcggcgcagctgacgactccgactagagcgccgc 228
                |||| ||||| ||||| ||||| ||||| | | |||| ||||||||   ||| ||||| |
Sbjct: 33605391 gatgctcccgaagcaccgcaagtacatctgtgaagctcacgactccagttagcgcgccac 33605450

                                                                            
Query: 229      tgacctcatcgacgacccaaacatgcccgactcggtgcgcgagcgcttgggccatgacgg 288
                ||||||| ||||||||||| || | ||||||||||||||| || || |  |||||||  |
Sbjct: 33605451 tgacctcgtcgacgacccagacgtacccgactcggtgcgcaagagcctacgccatgattg 33605510

                                                                            
Query: 289      cgaccagcgaactctcagcatgacacgccgccacgtcctccgtcgaccgccaccggaagc 348
                | |||||||| ||| ||||||| || |  || ||||||||| |||||| |||||  ||||
Sbjct: 33605511 ccaccagcgagctcccagcatggcatgtggcgacgtcctccatcgacctccaccataagc 33605570

                          
Query: 349      ttcccgacga 358
                ||||||||||
Sbjct: 33605571 ttcccgacga 33605580

>dbj|AP005513.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OSJNBa0014E22
          Length = 157627

 Score =  159 bits (80), Expect = 1e-35
 Identities = 167/196 (85%)
 Strand = Plus / Minus

                                                                          
Query: 164    acggagatggtcccggagcacagcaagcacatcggcgcagctgacgactccgactagagc 223
              ||||||||| ||||||||||| ||||| |||||  || |||| |||||||||  ||| ||
Sbjct: 136607 acggagatgctcccggagcaccgcaagtacatctccgaagctcacgactccggttagcgc 136548

                                                                          
Query: 224    gccgctgacctcatcgacgacccaaacatgcccgactcggtgcgcgagcgcttgggccat 283
              |||||||||||| ||||||||||| || | ||||||||||||||| || || || |||||
Sbjct: 136547 gccgctgacctcgtcgacgacccagacgtacccgactcggtgcgcaagagcctgcgccat 136488

                                                                          
Query: 284    gacggcgaccagcgaactctcagcatgacacgccgccacgtcctccgtcgaccgccaccg 343
              ||| || |||||||| ||| ||||||| || || || ||||||| |||||||| ||||| 
Sbjct: 136487 gactgccaccagcgagctcccagcatggcatgcggcgacgtccttcgtcgacctccacct 136428

                              
Query: 344    gaagcttcccgacgac 359
              ||||||||||||||||
Sbjct: 136427 gaagcttcccgacgac 136412

>dbj|AP004768.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0010C01
          Length = 186185

 Score =  159 bits (80), Expect = 1e-35
 Identities = 167/196 (85%)
 Strand = Plus / Minus

                                                                         
Query: 164   acggagatggtcccggagcacagcaagcacatcggcgcagctgacgactccgactagagc 223
             ||||||||| ||||||||||| ||||| |||||  || |||| |||||||||  ||| ||
Sbjct: 69236 acggagatgctcccggagcaccgcaagtacatctccgaagctcacgactccggttagcgc 69177

                                                                         
Query: 224   gccgctgacctcatcgacgacccaaacatgcccgactcggtgcgcgagcgcttgggccat 283
             |||||||||||| ||||||||||| || | ||||||||||||||| || || || |||||
Sbjct: 69176 gccgctgacctcgtcgacgacccagacgtacccgactcggtgcgcaagagcctgcgccat 69117

                                                                         
Query: 284   gacggcgaccagcgaactctcagcatgacacgccgccacgtcctccgtcgaccgccaccg 343
             ||| || |||||||| ||| ||||||| || || || ||||||| |||||||| ||||| 
Sbjct: 69116 gactgccaccagcgagctcccagcatggcatgcggcgacgtccttcgtcgacctccacct 69057

                             
Query: 344   gaagcttcccgacgac 359
             ||||||||||||||||
Sbjct: 69056 gaagcttcccgacgac 69041

>dbj|AK101596.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051G14, full
            insert sequence
          Length = 1626

 Score =  159 bits (80), Expect = 1e-35
 Identities = 167/196 (85%)
 Strand = Plus / Minus

                                                                        
Query: 164  acggagatggtcccggagcacagcaagcacatcggcgcagctgacgactccgactagagc 223
            ||||||||| ||||||||||| ||||| |||||  || |||| |||||||||  ||| ||
Sbjct: 1442 acggagatgctcccggagcaccgcaagtacatctccgaagctcacgactccggttagcgc 1383

                                                                        
Query: 224  gccgctgacctcatcgacgacccaaacatgcccgactcggtgcgcgagcgcttgggccat 283
            |||||||||||| ||||||||||| || | ||||||||||||||| || || || |||||
Sbjct: 1382 gccgctgacctcgtcgacgacccagacgtacccgactcggtgcgcaagagcctgcgccat 1323

                                                                        
Query: 284  gacggcgaccagcgaactctcagcatgacacgccgccacgtcctccgtcgaccgccaccg 343
            ||| || |||||||| ||| ||||||| || || || ||||||| |||||||| ||||| 
Sbjct: 1322 gactgccaccagcgagctcccagcatggcatgcggcgacgtccttcgtcgacctccacct 1263

                            
Query: 344  gaagcttcccgacgac 359
            ||||||||||||||||
Sbjct: 1262 gaagcttcccgacgac 1247

>ref|XM_468204.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 525

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 154/190 (81%)
 Strand = Plus / Plus

                                                                       
Query: 169 gatggtcccggagcacagcaagcacatcggcgcagctgacgactccgactagagcgccgc 228
           |||| ||||| ||||| ||||| ||||| | | |||| ||||||||   ||| ||||| |
Sbjct: 305 gatgctcccgaagcaccgcaagtacatctgtgaagctcacgactccagttagcgcgccac 364

                                                                       
Query: 229 tgacctcatcgacgacccaaacatgcccgactcggtgcgcgagcgcttgggccatgacgg 288
           ||||||| ||||||||||| || | ||||||||||||||| || || |  |||||||  |
Sbjct: 365 tgacctcgtcgacgacccagacgtacccgactcggtgcgcaagagcctacgccatgattg 424

                                                                       
Query: 289 cgaccagcgaactctcagcatgacacgccgccacgtcctccgtcgaccgccaccggaagc 348
           | |||||||| ||| ||||||| || |  || ||||||||| |||||| |||||  ||||
Sbjct: 425 ccaccagcgagctcccagcatggcatgtggcgacgtcctccatcgacctccaccataagc 484

                     
Query: 349 ttcccgacga 358
           ||||||||||
Sbjct: 485 ttcccgacga 494

>dbj|AP003984.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1046_F07
          Length = 114184

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 154/190 (81%)
 Strand = Plus / Plus

                                                                         
Query: 169   gatggtcccggagcacagcaagcacatcggcgcagctgacgactccgactagagcgccgc 228
             |||| ||||| ||||| ||||| ||||| | | |||| ||||||||   ||| ||||| |
Sbjct: 76062 gatgctcccgaagcaccgcaagtacatctgtgaagctcacgactccagttagcgcgccac 76121

                                                                         
Query: 229   tgacctcatcgacgacccaaacatgcccgactcggtgcgcgagcgcttgggccatgacgg 288
             ||||||| ||||||||||| || | ||||||||||||||| || || |  |||||||  |
Sbjct: 76122 tgacctcgtcgacgacccagacgtacccgactcggtgcgcaagagcctacgccatgattg 76181

                                                                         
Query: 289   cgaccagcgaactctcagcatgacacgccgccacgtcctccgtcgaccgccaccggaagc 348
             | |||||||| ||| ||||||| || |  || ||||||||| |||||| |||||  ||||
Sbjct: 76182 ccaccagcgagctcccagcatggcatgtggcgacgtcctccatcgacctccaccataagc 76241

                       
Query: 349   ttcccgacga 358
             ||||||||||
Sbjct: 76242 ttcccgacga 76251

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Minus

                                                                            
Query: 280      ccatgacggcgaccagcgaactctcagcatgacacgccgccacgtcctccgtcgaccgcc 339
                ||||||| || |||||||| |||  |||||| || |  || |||||||||||||||| ||
Sbjct: 42153526 ccatgactgccaccagcgagctcctagcatggcatggggcgacgtcctccgtcgacctcc 42153467

                                   
Query: 340      accggaagcttcccgacga 358
                ||| |||||||||||||||
Sbjct: 42153466 acctgaagcttcccgacga 42153448

>dbj|AP004326.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1294_F06
          Length = 121088

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 67/79 (84%)
 Strand = Plus / Minus

                                                                         
Query: 280   ccatgacggcgaccagcgaactctcagcatgacacgccgccacgtcctccgtcgaccgcc 339
             ||||||| || |||||||| |||  |||||| || |  || |||||||||||||||| ||
Sbjct: 26724 ccatgactgccaccagcgagctcctagcatggcatggggcgacgtcctccgtcgacctcc 26665

                                
Query: 340   accggaagcttcccgacga 358
             ||| |||||||||||||||
Sbjct: 26664 acctgaagcttcccgacga 26646

>gb|AC150916.3| Bos taurus  BAC CH240-309L24 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 158580

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 452   ggcggcatccatgaggtcgca 472
             |||||||||||||||||||||
Sbjct: 13996 ggcggcatccatgaggtcgca 13976

>gb|AC149679.2| Bos taurus  BAC CH240-27A8 (Children's Hospital Oakland Research
             Institute Bovine BAC Library (male)) complete sequence
          Length = 196187

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 452   ggcggcatccatgaggtcgca 472
             |||||||||||||||||||||
Sbjct: 79010 ggcggcatccatgaggtcgca 79030

>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 257     gactcggtgcgcgagcgcttgggcc 281
               |||||||||||||||||||| ||||
Sbjct: 3393474 gactcggtgcgcgagcgcttcggcc 3393450

>gb|AF521177.1| Hordeum vulgare contig 211252, complete sequence
          Length = 211664

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 4     aaaaggatcaaaacaccaaaattg 27
             |||| |||||||||||||||||||
Sbjct: 69372 aaaaagatcaaaacaccaaaattg 69349

>gb|CP000083.1| Colwellia psychrerythraea 34H, complete genome
          Length = 5373180

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 141    aaatcatctgcataacactctgga 164
              ||||||||||||||| ||||||||
Sbjct: 572143 aaatcatctgcataaaactctgga 572120

>gb|AC121342.6| Homo sapiens X BAC RP11-86A5 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 118301

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 136   atcacaaatcatctgcataacact 159
             ||||||||||||||| ||||||||
Sbjct: 45194 atcacaaatcatctgtataacact 45217

>gb|AE012198.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 106
            of 460 of the complete genome
          Length = 12541

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 366  ctcgcgcgcctggcaggcgc 385
            ||||||||||||||||||||
Sbjct: 9272 ctcgcgcgcctggcaggcgc 9291

>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII,
              complete sequence
          Length = 1476513

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 175    cccggagcacagcaagcaca 194
              ||||||||||||||||||||
Sbjct: 518094 cccggagcacagcaagcaca 518075

>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 366     ctcgcgcgcctggcaggcgc 385
               ||||||||||||||||||||
Sbjct: 3869685 ctcgcgcgcctggcaggcgc 3869666

>gb|AC084584.1|CBRG41B17 Caenorhabditis briggsae cosmid G41B17, complete sequence
          Length = 47026

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 402   tcgtcagatgacgttgatga 421
             ||||||||||||||||||||
Sbjct: 30076 tcgtcagatgacgttgatga 30057

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 334     accgccaccggaagcttccc 353
               ||||||||||||||||||||
Sbjct: 6426634 accgccaccggaagcttccc 6426653

>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 221     agcgccgctgacctcatcga 240
               ||||||||||||||||||||
Sbjct: 1707831 agcgccgctgacctcatcga 1707850

>ref|XM_315496.2| Anopheles gambiae str. PEST ENSANGP00000021773
           (ENSANGG00000019284), partial mRNA
          Length = 785

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 162 ggacggagatggtcccggag 181
           ||||||||||||||||||||
Sbjct: 590 ggacggagatggtcccggag 609

>ref|NM_211630.1| Eremothecium gossypii AGL099Cp (AGL099C), mRNA
          Length = 2244

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 175 cccggagcacagcaagcaca 194
           ||||||||||||||||||||
Sbjct: 737 cccggagcacagcaagcaca 756

>emb|AL607086.19| Mouse DNA sequence from clone RP23-269B7 on chromosome 4, complete
              sequence
          Length = 193830

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 57     caacagtggcagcagggtgg 76
              ||||||||||||||||||||
Sbjct: 174364 caacagtggcagcagggtgg 174383


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,860,546
Number of Sequences: 3902068
Number of extensions: 2860546
Number of successful extensions: 56692
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 56392
Number of HSP's gapped (non-prelim): 300
length of query: 494
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 472
effective length of database: 17,147,199,772
effective search space: 8093478292384
effective search space used: 8093478292384
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)