>emb|AL354777.16| Human DNA sequence from clone RP11-33K8 on chromosome 9, complete
             sequence
          Length = 152748

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 369   agccatctttactgttgcatg 389
             |||||||||||||||||||||
Sbjct: 83404 agccatctttactgttgcatg 83424

>gb|AC151732.2| Mus musculus BAC clone RP23-240L23 from 8, complete sequence
          Length = 204634

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 221   gaaagaaaaatctcacaagtt 241
             |||||||||||||||||||||
Sbjct: 76889 gaaagaaaaatctcacaagtt 76869

>ref|NM_125290.1| Arabidopsis thaliana protein binding / ubiquitin-protein ligase/
           zinc ion binding AT5G59000 mRNA, complete cds
          Length = 929

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 228 aaatctcacaagttacaaca 247
           ||||||||||||||||||||
Sbjct: 891 aaatctcacaagttacaaca 872

>gb|AF491307.2| Pseudomonas putida NCIB 9816-4 plasmid pDTG1, complete sequence
          Length = 83042

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 265  acagatcctgcgtgtactcaccac 288
            ||||||| ||||||||||||||||
Sbjct: 8696 acagatcttgcgtgtactcaccac 8719

>ref|XM_657886.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5374.2), mRNA
          Length = 1188

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 279 tactcaccacagcccagagg 298
           ||||||||||||||||||||
Sbjct: 99  tactcaccacagcccagagg 118

>gb|AC168853.1| Mus musculus BAC clone RP23-447G14 from chromosome 12, complete sequence
          Length = 188352

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 346    tgtgttacttgtatcacaccacca 369
              |||||||||||||||||| |||||
Sbjct: 151438 tgtgttacttgtatcacatcacca 151415

>gb|AC105600.5| Rattus norvegicus 4 BAC CH230-209E1 (Children's Hospital Oakland Research
              Institute) complete sequence
          Length = 218874

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 251    atcatacacacatcacagatcctg 274
              |||||||||||||||||| |||||
Sbjct: 170711 atcatacacacatcacagctcctg 170688

>gb|AC079329.15| Homo sapiens chromosome 11, clone RP11-265D17, complete sequence
          Length = 156540

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 283    caccacagcccagaggccacaaca 306
              ||||| ||||||||||||||||||
Sbjct: 150324 caccagagcccagaggccacaaca 150301

>gb|AC025300.10| Homo sapiens chromosome 11, clone RP11-573E11, complete sequence
          Length = 173709

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 283    caccacagcccagaggccacaaca 306
              ||||| ||||||||||||||||||
Sbjct: 127519 caccagagcccagaggccacaaca 127542

>emb|BX005074.10| Zebrafish DNA sequence from clone CH211-146J7 in linkage group 8,
              complete sequence
          Length = 153989

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 93     atgtacaataacatgtcaaa 112
              ||||||||||||||||||||
Sbjct: 102857 atgtacaataacatgtcaaa 102838

>gb|AY084907.1| Arabidopsis thaliana clone 120947 mRNA, complete sequence
          Length = 929

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 228 aaatctcacaagttacaaca 247
           ||||||||||||||||||||
Sbjct: 891 aaatctcacaagttacaaca 872

>gb|AC015916.13| Homo sapiens chromosome 17, clone CTD-2339F15, complete sequence
          Length = 102564

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 105   atgtcaaatgtctcaggcag 124
             ||||||||||||||||||||
Sbjct: 43407 atgtcaaatgtctcaggcag 43426

>dbj|AB016885.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K19M22
          Length = 77758

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 228   aaatctcacaagttacaaca 247
             ||||||||||||||||||||
Sbjct: 73125 aaatctcacaagttacaaca 73106

>dbj|AB237655.1| Pseudomonas putida plasmid NAH7 DNA, complete sequence, strain:G7
          Length = 82232

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 265  acagatcctgcgtgtactcaccac 288
            ||||||| ||||||||||||||||
Sbjct: 7968 acagatcttgcgtgtactcaccac 7991

>dbj|AB049142.1| Candida dubliniensis top2 gene for type II DNA topoisomerase,
           partial cds
          Length = 2348

 Score = 40.1 bits (20), Expect = 5.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 99  aataacatgtcaaatgtctc 118
           ||||||||||||||||||||
Sbjct: 389 aataacatgtcaaatgtctc 408


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,538,304
Number of Sequences: 3902068
Number of extensions: 4538304
Number of successful extensions: 82978
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 82953
Number of HSP's gapped (non-prelim): 25
length of query: 430
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 408
effective length of database: 17,147,199,772
effective search space: 6996057506976
effective search space used: 6996057506976
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)