>UDU3_ARATH (Q9FHD3) Hypothetical DUF26 domain-containing protein 3 precursor|
          Length = 287

 Score = 45.1 bits (105), Expect = 8e-05
 Identities = 20/54 (37%), Positives = 25/54 (46%)
 Frame = -1

Query: 421 GGAKTTIYGLGWCTRDITAADCGLCVAQAVAELPNYCRYRRGCRVIYSSCMARY 260
           G A  T+YG+  CT D+    C  CV  A  E+   C   R   + Y  CM RY
Sbjct: 76  GLASDTVYGMFLCTGDVNITTCNNCVKNATIEIVKNCTNHREAIIYYIDCMVRY 129

>UDU1_ARATH (Q9FHD5) DUF26 domain-containing protein 1 precursor|
          Length = 286

 Score = 42.7 bits (99), Expect = 4e-04
 Identities = 21/59 (35%), Positives = 27/59 (45%)
 Frame = -1

Query: 436 LGSDGGGAKTTIYGLGWCTRDITAADCGLCVAQAVAELPNYCRYRRGCRVIYSSCMARY 260
           LGSD      T++G+  C  D+    C  CV  A  E+   C   R   + Y SCM RY
Sbjct: 74  LGSD------TVHGMFLCIGDVNRTTCNACVKNATIEIAKNCTNHREAIIYYFSCMVRY 126

>UDU2_ARATH (Q9FHD4) DUF26 domain-containing protein 2 precursor|
          Length = 287

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 18/54 (33%), Positives = 24/54 (44%)
 Frame = -1

Query: 421 GGAKTTIYGLGWCTRDITAADCGLCVAQAVAELPNYCRYRRGCRVIYSSCMARY 260
           G A  T++G+  CT D+    C  CV  A  E+   C   R   +    CM RY
Sbjct: 72  GLASDTVHGMFLCTGDVNRTTCNACVKNATIEIAKNCTNHREAIIYNVDCMVRY 125



 Score = 29.6 bits (65), Expect = 3.3
 Identities = 13/50 (26%), Positives = 22/50 (44%)
 Frame = -1

Query: 385 CTRDITAADCGLCVAQAVAELPNYCRYRRGCRVIYSSCMARYEVYPLFFP 236
           CT D+   +C  C+  A+ EL   C  +    +   +CM  ++ Y    P
Sbjct: 200 CTPDLDPRNCTTCLKLALQELTECCGNQVWAFIYTPNCMVSFDTYNSSLP 249

>KAMA_CLOSU (Q9XBQ8) L-lysine 2,3-aminomutase (EC 5.4.3.2) (KAM) (LAM)|
          Length = 416

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 5/24 (20%)
 Frame = -2

Query: 120 LRGHSSSLCVP-----GPGGGGES 64
           LRGH+S  CVP      PGGGG++
Sbjct: 315 LRGHTSGYCVPTFVVDAPGGGGKT 338

>NU4M_DIDMA (P41308) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 474

 Score = 28.9 bits (63), Expect = 5.7
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = -1

Query: 163 CLWSTNY--V*STTVLSTRALQLVVRTWSWWW 74
           CL +TNY  + S T++  R LQL++   + WW
Sbjct: 328 CLANTNYERIHSRTMILARGLQLILPLMTTWW 359

>ZEP1_HUMAN (P15822) Zinc finger protein 40 (Human immunodeficiency virus type I|
            enhancer-binding protein 1) (HIV-EP1) (Major
            histocompatibility complex-binding protein 1) (MBP-1)
            (Positive regulatory domain II-binding factor 1)
            (PRDII-BF1)
          Length = 2717

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 17/39 (43%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
 Frame = +3

Query: 336  ACATHSPQSAAVMSLVHHPSP------*MVVLAPPPSLP 434
            A A HSPQ+AA M  V  P P        + L P P LP
Sbjct: 2335 AAAEHSPQTAAGMPSVASPHPDPQEQKQQITLQPTPGLP 2373

>NU4M_MACRO (P92668) NADH-ubiquinone oxidoreductase chain 4 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 4)
          Length = 459

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/32 (40%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
 Frame = -1

Query: 163 CLWSTNY--V*STTVLSTRALQLVVRTWSWWW 74
           CL +TNY  + S T++  R LQL++     WW
Sbjct: 328 CLANTNYERIHSRTMILARGLQLILPLMCTWW 359

>CP070_MOUSE (Q922R1) UPF0183 protein C16orf70 homolog|
          Length = 422

 Score = 28.1 bits (61), Expect = 9.7
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = -1

Query: 355 GLCVAQAVAELPNYCRYRRGCRVIYS 278
           G+ +AQAVA L  +CR  R  +V+YS
Sbjct: 22  GMPLAQAVAILQKHCRIIRNVQVLYS 47


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,720,641
Number of Sequences: 219361
Number of extensions: 1103036
Number of successful extensions: 4069
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3731
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4056
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2511994855
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)