ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart42a09
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK119933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 839 0.0
2ref|XM_475074.1| Oryza sativa (japonica cultivar-group), predic... 218 1e-53
3dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 218 1e-53
4dbj|AK108350.1| Oryza sativa (japonica cultivar-group) cDNA clon... 218 1e-53
5gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome... 218 1e-53
6gb|L14835.1|MZEWUSB Zea mays (clone wusl1032) mRNA sequence 60 6e-06
7gb|AY728087.1| Taricha granulosa ORL1-like opioid receptor mRNA,... 44 0.38
8ref|XM_479982.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.5
9ref|XM_528133.1| PREDICTED: Pan troglodytes similar to opioid re... 42 1.5
10gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 42 1.5
11emb|AL954251.1| Pan troglodytes chromosome 22 clone PTB-044H21 m... 42 1.5
12dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005 42 1.5
13gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare str... 42 1.5
14dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
15dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
16dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
17dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.5
18dbj|AK073888.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
19dbj|AK061425.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.5
20gb|AF097724.1|AF097724 Oryza sativa 33-kDa secretory protein mRN... 42 1.5
21gb|AF093570.1|AF093570 Oryza sativa 33 kDa secretory protein mRN... 42 1.5
22gb|AF090872.1|AF090872 Oryza sativa 33 kDa secretory protein mRN... 42 1.5
23gb|U11053.1|HSU11053 Human kappa opioid receptor (hKOR) mRNA, co... 42 1.5
24ref|NM_187099.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.9
25ref|XM_476361.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.9
26ref|XM_506132.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 5.9
27gb|BC099912.1| Homo sapiens opioid receptor, kappa 1, mRNA (cDNA... 40 5.9
28ref|NM_000912.3| Homo sapiens opioid receptor, kappa 1 (OPRK1), ... 40 5.9
29gb|AC100727.10| Mus musculus chromosome 1, clone RP24-278K16, co... 40 5.9
30gb|AC163025.3| Mus musculus chromosome 1, clone RP23-80N7, compl... 40 5.9
31emb|Z68338.1|CET24B8 Caenorhabditis elegans Cosmid T24B8, comple... 40 5.9
32emb|Y10124.2|TTNARZYWV Thermus thermophilus nar operon (narCGHIJ... 40 5.9
33emb|AL591979.1| Listeria monocytogenes strain EGD, complete geno... 40 5.9
34emb|AJ132396.1|KPN132396 Klebsiella pneumoniae D partial gmhD, w... 40 5.9
35emb|BX323467.8| Zebrafish DNA sequence from clone DKEY-48N15, co... 40 5.9
36gb|AC009646.12| Homo sapiens chromosome 8, clone RP11-162D9, com... 40 5.9
37gb|AF498922.1| Homo sapiens opioid receptor kappa (OPRK1) mRNA, ... 40 5.9
38ref|NM_134474.4| Drosophila melanogaster CG32532-RA (CG32532), mRNA 40 5.9
39gb|CP000249.1| Frankia sp. CcI3, complete genome 40 5.9
40gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, r... 40 5.9
41gb|AY823268.1| Klebsiella pneumoniae strain 52145 waa gene clust... 40 5.9
42ref|NM_063535.1| Caenorhabditis elegans T24B8.4 (T24B8.4) mRNA, ... 40 5.9
43dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
44gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, r... 40 5.9
45dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.9
46gb|AY168006.1| Homo sapiens DRG kappa 1 splice variant KOR 1A mR... 40 5.9
47dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
48dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 5.9
49dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.9
50emb|Y10904.1|CCMUOPI C.commersoni mRNA for mu opioid receptor 40 5.9
51dbj|AK100796.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
52dbj|AK100327.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.9
53gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 ... 40 5.9
54gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, com... 40 5.9
55gb|U17298.1|HSU17298 Human kappa opioid receptor (hKOR) mRNA, co... 40 5.9
56gb|U04092.1|CPU04092 Cavia porcellus Hartley kappa opioid recept... 40 5.9
57gb|L37362.1|HUMOPRK1B Homo sapiens (clone d2-115) kappa opioid r... 40 5.9 
>dbj|AK119933.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-A09, full
            insert sequence
          Length = 1094

 Score =  839 bits (423), Expect = 0.0
 Identities = 432/435 (99%)
 Strand = Plus / Minus

                                                                        
Query: 2    acacaaacaaacacaaggcttggattcaaggctagctacgagctagccatacactaacaa 61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1062 acacaaacaaacacaaggcttggattcaaggctagctacgagctagccatacactaacaa 1003

                                                                        
Query: 62   atggattcgccaccaccaccaggaccaggtacgcacaacgagctggagtgccctcgtaga 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1002 atggattcgccaccaccaccaggaccaggtacgcacaacgagctggagtgccctcgtaga 943

                                                                        
Query: 122  tagcaccgtagttgactacacgtagtttgtactccacaaacaaatacatcacgcgttcaa 181
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 942  tagcaccgtagttgactacacgtagtttgtactccacaaacaaatacatcacgcgttcaa 883

                                                                        
Query: 182  gacaatcttgtcgcactggccgacctcgtcggccgacttgtcggcgccgtcgagcgggaa 241
            |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 882  gacaatcttgtcgcactgtccgacctcgtcggccgacttgtcggcgccgtcgagcgggaa 823

                                                                        
Query: 242  gaagagggggtacacctcgtagcgcgccatgcagctgctgtagatcacgcggcacccgcg 301
            ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 822  gaagaaggggtacacctcgtagcgcgccatgcagctgctgtagatctcgcggcacccgcg 763

                                                                        
Query: 302  ccggtaccggcagtagttgggcagctcggccacagcctgcgccacgcacagcccgcagtc 361
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762  ccggtaccggcagtagttgggcagctcggccacagcctgcgccacgcacagcccgcagtc 703

                                                                        
Query: 362  ggccgccgtgatgtccctggtgcaccacccgagcccgtagatggtcgtcttggctccgcc 421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702  ggccgccgtgatgtccctggtgcaccacccgagcccgtagatggtcgtcttggctccgcc 643

                           
Query: 422  accatcgctgccgag 436
            |||||||||||||||
Sbjct: 642  accatcgctgccgag 628
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>ref|XM_475074.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 819

 Score =  218 bits (110), Expect = 1e-53
 Identities = 164/182 (90%)
 Strand = Plus / Minus

                                                                       
Query: 226 cgccgtcgagcgggaagaagagggggtacacctcgtagcgcgccatgcagctgctgtaga 285
           |||||||||||||||||||||  |||||   ||||||||||||||||||||||||||| |
Sbjct: 754 cgccgtcgagcgggaagaagaatgggtaggtctcgtagcgcgccatgcagctgctgtaca 695

                                                                       
Query: 286 tcacgcggcacccgcgccggtaccggcagtagttgggcagctcggccacagcctgcgcca 345
            ||||||||| || |||||| | |||||||||||||||| ||| ||||| ||||||||||
Sbjct: 694 gcacgcggcatcctcgccggaatcggcagtagttgggcatctccgccaccgcctgcgcca 635

                                                                       
Query: 346 cgcacagcccgcagtcggccgccgtgatgtccctggtgcaccacccgagcccgtagatgg 405
           |||||||||||||||| |||||||||||||| |  |||||||||||||||||||||||||
Sbjct: 634 cgcacagcccgcagtccgccgccgtgatgtcgcgcgtgcaccacccgagcccgtagatgg 575

             
Query: 406 tc 407
           ||
Sbjct: 574 tc 573
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5,
              complete sequence
          Length = 29737217

 Score =  218 bits (110), Expect = 1e-53
 Identities = 164/182 (90%)
 Strand = Plus / Plus

                                                                          
Query: 226    cgccgtcgagcgggaagaagagggggtacacctcgtagcgcgccatgcagctgctgtaga 285
              |||||||||||||||||||||  |||||   ||||||||||||||||||||||||||| |
Sbjct: 659635 cgccgtcgagcgggaagaagaatgggtaggtctcgtagcgcgccatgcagctgctgtaca 659694

                                                                          
Query: 286    tcacgcggcacccgcgccggtaccggcagtagttgggcagctcggccacagcctgcgcca 345
               ||||||||| || |||||| | |||||||||||||||| ||| ||||| ||||||||||
Sbjct: 659695 gcacgcggcatcctcgccggaatcggcagtagttgggcatctccgccaccgcctgcgcca 659754

                                                                          
Query: 346    cgcacagcccgcagtcggccgccgtgatgtccctggtgcaccacccgagcccgtagatgg 405
              |||||||||||||||| |||||||||||||| |  |||||||||||||||||||||||||
Sbjct: 659755 cgcacagcccgcagtccgccgccgtgatgtcgcgcgtgcaccacccgagcccgtagatgg 659814

                
Query: 406    tc 407
              ||
Sbjct: 659815 tc 659816
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>dbj|AK108350.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-142-B11, full
           insert sequence
          Length = 1008

 Score =  218 bits (110), Expect = 1e-53
 Identities = 164/182 (90%)
 Strand = Plus / Minus

                                                                       
Query: 226 cgccgtcgagcgggaagaagagggggtacacctcgtagcgcgccatgcagctgctgtaga 285
           |||||||||||||||||||||  |||||   ||||||||||||||||||||||||||| |
Sbjct: 793 cgccgtcgagcgggaagaagaatgggtaggtctcgtagcgcgccatgcagctgctgtaca 734

                                                                       
Query: 286 tcacgcggcacccgcgccggtaccggcagtagttgggcagctcggccacagcctgcgcca 345
            ||||||||| || |||||| | |||||||||||||||| ||| ||||| ||||||||||
Sbjct: 733 gcacgcggcatcctcgccggaatcggcagtagttgggcatctccgccaccgcctgcgcca 674

                                                                       
Query: 346 cgcacagcccgcagtcggccgccgtgatgtccctggtgcaccacccgagcccgtagatgg 405
           |||||||||||||||| |||||||||||||| |  |||||||||||||||||||||||||
Sbjct: 673 cgcacagcccgcagtccgccgccgtgatgtcgcgcgtgcaccacccgagcccgtagatgg 614

             
Query: 406 tc 407
           ||
Sbjct: 613 tc 612
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>gb|AC093921.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
            OSJNBb0041A22, complete sequence
          Length = 117919

 Score =  218 bits (110), Expect = 1e-53
 Identities = 164/182 (90%)
 Strand = Plus / Plus

                                                                        
Query: 226  cgccgtcgagcgggaagaagagggggtacacctcgtagcgcgccatgcagctgctgtaga 285
            |||||||||||||||||||||  |||||   ||||||||||||||||||||||||||| |
Sbjct: 4834 cgccgtcgagcgggaagaagaatgggtaggtctcgtagcgcgccatgcagctgctgtaca 4893

                                                                        
Query: 286  tcacgcggcacccgcgccggtaccggcagtagttgggcagctcggccacagcctgcgcca 345
             ||||||||| || |||||| | |||||||||||||||| ||| ||||| ||||||||||
Sbjct: 4894 gcacgcggcatcctcgccggaatcggcagtagttgggcatctccgccaccgcctgcgcca 4953

                                                                        
Query: 346  cgcacagcccgcagtcggccgccgtgatgtccctggtgcaccacccgagcccgtagatgg 405
            |||||||||||||||| |||||||||||||| |  |||||||||||||||||||||||||
Sbjct: 4954 cgcacagcccgcagtccgccgccgtgatgtcgcgcgtgcaccacccgagcccgtagatgg 5013

              
Query: 406  tc 407
            ||
Sbjct: 5014 tc 5015
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>gb|L14835.1|MZEWUSB Zea mays (clone wusl1032) mRNA sequence
          Length = 943

 Score = 60.0 bits (30), Expect = 6e-06
 Identities = 51/58 (87%)
 Strand = Plus / Plus

                                                                     
Query: 227 gccgtcgagcgggaagaagagggggtacacctcgtagcgcgccatgcagctgctgtag 284
           |||| ||||||||||| ||| |||||| | |||||||||| || ||||||||||||||
Sbjct: 197 gccggcgagcgggaagtagaaggggtagatctcgtagcgcaccctgcagctgctgtag 254
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>gb|AY728087.1| Taricha granulosa ORL1-like opioid receptor mRNA, complete cds
          Length = 1120

 Score = 44.1 bits (22), Expect = 0.38
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 69  cgccaccaccaccaggaccagg 90
           ||||||||||||||||||||||
Sbjct: 810 cgccaccaccaccaggaccagg 789
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>ref|XM_479982.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1156

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 231 tcgagcgggaagaagagggggtacacctcgtagcgcgccatgcagctgctgta 283
           ||||| |||||| ||| |||||| | |||||||||||||   |||||||||||
Sbjct: 833 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 781
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>ref|XM_528133.1| PREDICTED: Pan troglodytes similar to opioid receptor, kappa 1;
            Opiate receptor, kappa-1 (LOC472761), mRNA
          Length = 2559

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 69   cgccaccaccaccaggaccag 89
            |||||||||||||||||||||
Sbjct: 2259 cgccaccaccaccaggaccag 2239
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                    
Query: 232     cgagcgggaagaagagggggtacacctcgtagcgcgccatgcagctgctgtag 284
               ||||||||||| ||| ||| || | |||||||||| || ||||||| ||||||
Sbjct: 9393992 cgagcgggaagtagaagggatagatctcgtagcgcaccctgcagctactgtag 9394044
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>emb|AL954251.1| Pan troglodytes chromosome 22 clone PTB-044H21 map 22q22.3, complete
             sequence
          Length = 149587

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 62    atggattcgccaccaccacca 82
             |||||||||||||||||||||
Sbjct: 91235 atggattcgccaccaccacca 91215
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>dbj|AP007151.1| Aspergillus oryzae RIB40 genomic DNA, SC005
          Length = 4429080

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 175     cgttcaagacaatcttgtcgc 195
               |||||||||||||||||||||
Sbjct: 1884242 cgttcaagacaatcttgtcgc 1884262
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>gb|AC083942.8| Genomic sequence for Oryza sativa, Nipponbare strain, clone
             OSJNBa0002D01, from chromosome 3, complete sequence
          Length = 187589

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                  
Query: 232   cgagcgggaagaagagggggtacacctcgtagcgcgccatgcagctgctgtag 284
             ||||||||||| ||| ||| || | |||||||||| || ||||||| ||||||
Sbjct: 91392 cgagcgggaagtagaagggatagatctcgtagcgcaccctgcagctactgtag 91444
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
               sequence
          Length = 28434780

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                    
Query: 231     tcgagcgggaagaagagggggtacacctcgtagcgcgccatgcagctgctgta 283
               ||||| |||||| ||| |||||| | |||||||||||||   |||||||||||
Sbjct: 2057194 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 2057246
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                    
Query: 232     cgagcgggaagaagagggggtacacctcgtagcgcgccatgcagctgctgtag 284
               ||||||||||| ||| ||| || | |||||||||| || ||||||| ||||||
Sbjct: 9392113 cgagcgggaagtagaagggatagatctcgtagcgcaccctgcagctactgtag 9392165
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>dbj|AP003896.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1613_G04
          Length = 135357

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                  
Query: 231   tcgagcgggaagaagagggggtacacctcgtagcgcgccatgcagctgctgta 283
             ||||| |||||| ||| |||||| | |||||||||||||   |||||||||||
Sbjct: 50724 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 50776
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>dbj|AP005620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0680F05
          Length = 185495

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Plus

                                                                   
Query: 231    tcgagcgggaagaagagggggtacacctcgtagcgcgccatgcagctgctgta 283
              ||||| |||||| ||| |||||| | |||||||||||||   |||||||||||
Sbjct: 182392 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 182444
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>dbj|AK073888.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075I11, full
           insert sequence
          Length = 1156

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 231 tcgagcgggaagaagagggggtacacctcgtagcgcgccatgcagctgctgta 283
           ||||| |||||| ||| |||||| | |||||||||||||   |||||||||||
Sbjct: 833 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 781
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>dbj|AK061425.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-306-G05, full
           insert sequence
          Length = 1133

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 232 cgagcgggaagaagagggggtacacctcgtagcgcgccatgcagctgctgtag 284
           ||||||||||| ||| ||| || | |||||||||| || ||||||| ||||||
Sbjct: 825 cgagcgggaagtagaagggatagatctcgtagcgcaccctgcagctactgtag 773
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>gb|AF097724.1|AF097724 Oryza sativa 33-kDa secretory protein mRNA, complete cds
          Length = 1179

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 231 tcgagcgggaagaagagggggtacacctcgtagcgcgccatgcagctgctgta 283
           ||||| |||||| ||| |||||| | |||||||||||||   |||||||||||
Sbjct: 814 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 762
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>gb|AF093570.1|AF093570 Oryza sativa 33 kDa secretory protein mRNA, complete cds
          Length = 1106

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 231 tcgagcgggaagaagagggggtacacctcgtagcgcgccatgcagctgctgta 283
           ||||| |||||| ||| |||||| | |||||||||||||   |||||||||||
Sbjct: 828 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 776
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>gb|AF090872.1|AF090872 Oryza sativa 33 kDa secretory protein mRNA, complete cds
          Length = 1025

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 45/53 (84%)
 Strand = Plus / Minus

                                                                
Query: 231 tcgagcgggaagaagagggggtacacctcgtagcgcgccatgcagctgctgta 283
           ||||| |||||| ||| |||||| | |||||||||||||   |||||||||||
Sbjct: 824 tcgagtgggaagtagaaggggtagatctcgtagcgcgcccaacagctgctgta 772
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>gb|U11053.1|HSU11053 Human kappa opioid receptor (hKOR) mRNA, complete cds
          Length = 1182

 Score = 42.1 bits (21), Expect = 1.5
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 69  cgccaccaccaccaggaccag 89
           |||||||||||||||||||||
Sbjct: 856 cgccaccaccaccaggaccag 836
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>ref|NM_187099.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 789

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 226 cgccgtcgagcgggaagaag 245
           ||||||||||||||||||||
Sbjct: 265 cgccgtcgagcgggaagaag 246
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>ref|XM_476361.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1618

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 346  cgcacagcccgcagtcggcc 365
            ||||||||||||||||||||
Sbjct: 1209 cgcacagcccgcagtcggcc 1228
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>ref|XM_506132.1| PREDICTED Oryza sativa (japonica cultivar-group), B1026C12.35 mRNA
          Length = 1642

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 346  cgcacagcccgcagtcggcc 365
            ||||||||||||||||||||
Sbjct: 1209 cgcacagcccgcagtcggcc 1228
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>gb|BC099912.1| Homo sapiens opioid receptor, kappa 1, mRNA (cDNA clone MGC:104656
            IMAGE:30531690), complete cds
          Length = 4943

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 70   gccaccaccaccaggaccag 89
            ||||||||||||||||||||
Sbjct: 1053 gccaccaccaccaggaccag 1034
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>ref|NM_000912.3| Homo sapiens opioid receptor, kappa 1 (OPRK1), mRNA
          Length = 4959

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 70   gccaccaccaccaggaccag 89
            ||||||||||||||||||||
Sbjct: 1077 gccaccaccaccaggaccag 1058
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>gb|AC100727.10| Mus musculus chromosome 1, clone RP24-278K16, complete sequence
          Length = 170056

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 1     gacacaaacaaacacaaggc 20
             ||||||||||||||||||||
Sbjct: 43986 gacacaaacaaacacaaggc 44005
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>gb|AC163025.3| Mus musculus chromosome 1, clone RP23-80N7, complete sequence
          Length = 174774

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 1     gacacaaacaaacacaaggc 20
             ||||||||||||||||||||
Sbjct: 32157 gacacaaacaaacacaaggc 32138
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>emb|Z68338.1|CET24B8 Caenorhabditis elegans Cosmid T24B8, complete sequence
          Length = 38779

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 71    ccaccaccaccaggaccagg 90
             ||||||||||||||||||||
Sbjct: 19675 ccaccaccaccaggaccagg 19656
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>emb|Y10124.2|TTNARZYWV Thermus thermophilus nar operon (narCGHIJK genes)
          Length = 10622

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 73   accaccaccaggaccaggta 92
            ||||||||||||||||||||
Sbjct: 7564 accaccaccaggaccaggta 7545
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>emb|AL591979.1| Listeria monocytogenes strain EGD, complete genome, segment 7/12
          Length = 240050

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 69     cgccaccaccaccaggacca 88
              ||||||||||||||||||||
Sbjct: 126352 cgccaccaccaccaggacca 126371
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>emb|AJ132396.1|KPN132396 Klebsiella pneumoniae D partial gmhD, waaF and waaC genes and
           partial ORFX, strain 889/50
          Length = 2928

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 324 agctcggccacagcctgcgc 343
           ||||||||||||||||||||
Sbjct: 696 agctcggccacagcctgcgc 715
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>emb|BX323467.8| Zebrafish DNA sequence from clone DKEY-48N15, complete sequence
          Length = 116326

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 148    ttgtactccacaaacaaata 167
              ||||||||||||||||||||
Sbjct: 107057 ttgtactccacaaacaaata 107076
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>gb|AC009646.12| Homo sapiens chromosome 8, clone RP11-162D9, complete sequence
          Length = 183519

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 70     gccaccaccaccaggaccag 89
              ||||||||||||||||||||
Sbjct: 110957 gccaccaccaccaggaccag 110976
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>gb|AF498922.1| Homo sapiens opioid receptor kappa (OPRK1) mRNA, complete cds
          Length = 1143

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 70  gccaccaccaccaggaccag 89
           ||||||||||||||||||||
Sbjct: 842 gccaccaccaccaggaccag 823
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>ref|NM_134474.4| Drosophila melanogaster CG32532-RA (CG32532), mRNA
          Length = 4422

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 71   ccaccaccaccaggaccagg 90
            ||||||||||||||||||||
Sbjct: 1325 ccaccaccaccaggaccagg 1306
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>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 191     gtcgcactggccgacctcgtcggc 214
               ||||| ||||||||||||||||||
Sbjct: 3307102 gtcgccctggccgacctcgtcggc 3307125
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>gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, region 18C-18D, BAC clone
              BACR27L16, complete sequence
          Length = 182623

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     ccaccaccaccaggaccagg 90
              ||||||||||||||||||||
Sbjct: 147511 ccaccaccaccaggaccagg 147530
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>gb|AY823268.1| Klebsiella pneumoniae strain 52145 waa gene cluster, partial sequence
          Length = 14397

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 324  agctcggccacagcctgcgc 343
            ||||||||||||||||||||
Sbjct: 1301 agctcggccacagcctgcgc 1320
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>ref|NM_063535.1| Caenorhabditis elegans T24B8.4 (T24B8.4) mRNA, complete cds
          Length = 2745

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 71  ccaccaccaccaggaccagg 90
           ||||||||||||||||||||
Sbjct: 286 ccaccaccaccaggaccagg 305
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 226      cgccgtcgagcgggaagaag 245
                ||||||||||||||||||||
Sbjct: 15383126 cgccgtcgagcgggaagaag 15383107



 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 346    cgcacagcccgcagtcggcc 365
              ||||||||||||||||||||
Sbjct: 154315 cgcacagcccgcagtcggcc 154296
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>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone
             BACR10M08, complete sequence
          Length = 180213

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 71    ccaccaccaccaggaccagg 90
             ||||||||||||||||||||
Sbjct: 85991 ccaccaccaccaggaccagg 86010
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 193     cgcactggccgacctcgtcg 212
               ||||||||||||||||||||
Sbjct: 2866014 cgcactggccgacctcgtcg 2865995
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>gb|AY168006.1| Homo sapiens DRG kappa 1 splice variant KOR 1A mRNA, complete cds,
            alternatively spliced
          Length = 1396

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 70   gccaccaccaccaggaccag 89
            ||||||||||||||||||||
Sbjct: 1036 gccaccaccaccaggaccag 1017
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>dbj|AP003802.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1047_A06
          Length = 111673

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 226   cgccgtcgagcgggaagaag 245
             ||||||||||||||||||||
Sbjct: 90125 cgccgtcgagcgggaagaag 90106
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 221     gtcggcgccgtcgagcggga 240
               ||||||||||||||||||||
Sbjct: 3192722 gtcggcgccgtcgagcggga 3192741
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>dbj|AP005869.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:B1026C12
          Length = 170240

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 346    cgcacagcccgcagtcggcc 365
              ||||||||||||||||||||
Sbjct: 153614 cgcacagcccgcagtcggcc 153595
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>emb|Y10904.1|CCMUOPI C.commersoni mRNA for mu opioid receptor
          Length = 1231

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 69  cgccaccaccaccaggacca 88
           ||||||||||||||||||||
Sbjct: 888 cgccaccaccaccaggacca 869
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>dbj|AK100796.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023121F13, full
            insert sequence
          Length = 1641

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 346  cgcacagcccgcagtcggcc 365
            ||||||||||||||||||||
Sbjct: 1208 cgcacagcccgcagtcggcc 1227
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>dbj|AK100327.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023079N22, full
            insert sequence
          Length = 1617

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 346  cgcacagcccgcagtcggcc 365
            ||||||||||||||||||||
Sbjct: 1208 cgcacagcccgcagtcggcc 1227
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>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete
              sequence
          Length = 346474

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 71     ccaccaccaccaggaccagg 90
              ||||||||||||||||||||
Sbjct: 191757 ccaccaccaccaggaccagg 191776
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>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence
          Length = 3809201

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 199    ggccgacctcgtcggccgac 218
              ||||||||||||||||||||
Sbjct: 513170 ggccgacctcgtcggccgac 513151
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>gb|U17298.1|HSU17298 Human kappa opioid receptor (hKOR) mRNA, complete cds
          Length = 1154

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 70  gccaccaccaccaggaccag 89
           ||||||||||||||||||||
Sbjct: 842 gccaccaccaccaggaccag 823
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>gb|U04092.1|CPU04092 Cavia porcellus Hartley kappa opioid receptor mRNA, complete cds
          Length = 1733

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 70   gccaccaccaccaggaccag 89
            ||||||||||||||||||||
Sbjct: 1081 gccaccaccaccaggaccag 1062
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>gb|L37362.1|HUMOPRK1B Homo sapiens (clone d2-115) kappa opioid receptor (OPRK1) mRNA,
            complete cds
          Length = 1604

 Score = 40.1 bits (20), Expect = 5.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 70   gccaccaccaccaggaccag 89
            ||||||||||||||||||||
Sbjct: 1219 gccaccaccaccaggaccag 1200


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,962,229
Number of Sequences: 3902068
Number of extensions: 3962229
Number of successful extensions: 82112
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 81371
Number of HSP's gapped (non-prelim): 741
length of query: 436
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 414
effective length of database: 17,147,199,772
effective search space: 7098940705608
effective search space used: 7098940705608
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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