Clone Name | rbart42a07 |
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Clone Library Name | barley_pub |
>G6PD_RHIME (Q9Z3S2) Glucose-6-phosphate 1-dehydrogenase (EC 1.1.1.49) (G6PD)| Length = 491 Score = 31.2 bits (69), Expect = 1.2 Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 3/83 (3%) Frame = -3 Query: 380 ASEVERVVVRQLGVHRCWGAADAGFHHGRVKEHHPGRLHVPVLFVKVHARLGSWRW---P 210 AS VE+V VR G +R GA+ G G ++E G + FV + A + +WRW P Sbjct: 279 ASNVEQVTVR--GQYRA-GASSGGPVKGYLEELEGGVSNTET-FVAIKAEISNWRWAGVP 334 Query: 209 SCLQCNSRLLPNHSRSLASIQRV 141 L+ R+ S + + +++ Sbjct: 335 FYLRTGKRMAGRMSEIVITFKQI 357
>META_OCEIH (Q8ET26) Homoserine O-succinyltransferase (EC 2.3.1.46) (Homoserine| O-transsuccinylase) (HTS) Length = 303 Score = 30.0 bits (66), Expect = 2.6 Identities = 10/21 (47%), Positives = 14/21 (66%) Frame = -3 Query: 341 VHRCWGAADAGFHHGRVKEHH 279 +H CWGA A +HH + +HH Sbjct: 139 LHICWGAQAALYHHYGIDKHH 159
>DSG3_MOUSE (O35902) Desmoglein-3 precursor (130 kDa pemphigus vulgaris antigen| homolog) Length = 993 Score = 30.0 bits (66), Expect = 2.6 Identities = 13/28 (46%), Positives = 19/28 (67%) Frame = +3 Query: 306 ETSISSTPTTMHPQLANHDALNLGGFLI 389 ETS+ ST ++HP +A D L LG +L+ Sbjct: 901 ETSVMSTSGSVHPAVAIPDPLQLGNYLL 928
>NOC4_YEAST (Q06512) Nucleolar complex protein 4 (U3 small nucleolar| RNA-associated protein 19) (U3 snoRNA-associated protein 19) Length = 552 Score = 29.3 bits (64), Expect = 4.4 Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 2/61 (3%) Frame = +3 Query: 261 NVEASWMMLLNPPMVETSISSTPTTMHPQLAN--HDALNLGGFLIFSHRMQGRKKEVGVN 434 N E +W+ LLN + S +H ++ H L FL S+ +Q K GV Sbjct: 256 NFEKNWLSLLNGQLSLQQYKSILLILHKRIIPHFHTPTKLMDFLTDSYNLQSSNKNAGVV 315 Query: 435 P 437 P Sbjct: 316 P 316
>OXRP_CRIGR (Q60432) 150 kDa oxygen-regulated protein precursor (Orp150) (Hypoxia| up-regulated 1) (170 kDa glucose-regulated protein) Length = 999 Score = 28.9 bits (63), Expect = 5.8 Identities = 22/85 (25%), Positives = 36/85 (42%), Gaps = 4/85 (4%) Frame = +2 Query: 131 RCRSPSESKPTTLSDSVRAYCYIVGRMATSSYLAARA----PSRIELERGGVLDDAP*PA 298 + + P+ KP LS + A + R YL +A P ++ G + P A Sbjct: 875 QAKLPATEKPVLLSKDIEAKMMALDREV--QYLLNKAKFTKPRPRPKDKNGTRTEPPLNA 932 Query: 299 HGGNQHQQHPNNDAPPVGEPRRAQP 373 G+Q ++ PP G+P A+P Sbjct: 933 TAGDQEEKV----IPPAGQPEEAKP 953
>NPD_THEMA (Q9WYW0) NAD-dependent deacetylase (EC 3.5.1.-) (Regulatory protein| SIR2 homolog) Length = 246 Score = 28.9 bits (63), Expect = 5.8 Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%) Frame = -3 Query: 386 QEASEVERVVVRQLG-VHRCWGAADAGFHHGRVKEHHPGRLHVPVLFVKVHARLGSWRWP 210 +E +E V+ + + +H+ G+ HG V+E++ R V +L S P Sbjct: 87 EEKGLIEAVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEKKYTVEDVIKKLESSDVP 146 Query: 209 SCLQCNSRLLPN 174 C CNS + PN Sbjct: 147 LCDDCNSLIRPN 158
>ERME_SACER (P07287) rRNA adenine N-6-methyltransferase (EC 2.1.1.48)| (Macrolide-lincosamide-streptogramin B resistance protein) (Erythromycin resistance protein) (NMT) Length = 370 Score = 28.5 bits (62), Expect = 7.6 Identities = 14/34 (41%), Positives = 19/34 (55%) Frame = +2 Query: 278 DDAP*PAHGGNQHQQHPNNDAPPVGEPRRAQPRR 379 D+ P P NQ +QHPN + P +G R + RR Sbjct: 5 DEQPRPRRR-NQDRQHPNQNRPVLGRTERDRNRR 37
>ATS17_HUMAN (Q8TE56) ADAMTS-17 precursor (EC 3.4.24.-) (A disintegrin and| metalloproteinase with thrombospondin motifs 17) (ADAM-TS 17) (ADAM-TS17) Length = 1095 Score = 28.5 bits (62), Expect = 7.6 Identities = 11/23 (47%), Positives = 14/23 (60%) Frame = -2 Query: 75 RRSTLCPSLNKPCPYYAAIQIVC 7 R + CP+L+KP PY Q VC Sbjct: 1006 RHGSECPALSKPAPYRQCYQEVC 1028
>FGFR3_MOUSE (Q61851) Fibroblast growth factor receptor 3 precursor (EC 2.7.10.1)| (FGFR-3) (Heparin-binding growth factor receptor) Length = 801 Score = 28.5 bits (62), Expect = 7.6 Identities = 29/112 (25%), Positives = 44/112 (39%), Gaps = 1/112 (0%) Frame = +2 Query: 44 LLSDGHKVLRRSLGHHLPFAC-HDISLTLRRCRSPSESKPTTLSDSVRAYCYIVGRMATS 220 LL +GH++ + P +C HD+ + +R C S+ T V I+ +T Sbjct: 701 LLKEGHRMDK-------PASCTHDLYMIMRECWHAVPSQRPTFKQLVEDLDRILTVTSTD 753 Query: 221 SYLAARAPSRIELERGGVLDDAP*PAHGGNQHQQHPNNDAPPVGEPRRAQPR 376 YL P + GG D P + G+ +D P G P PR Sbjct: 754 EYLDLSVPFE-QYSPGG--QDTPSSSSSGDDSVF--THDLLPPGPPSNGGPR 800
>DPO3_LACPL (Q88VK2) DNA polymerase III polC-type (EC 2.7.7.7) (PolIII)| Length = 1437 Score = 28.1 bits (61), Expect = 9.9 Identities = 18/49 (36%), Positives = 26/49 (53%) Frame = +3 Query: 21 LQHSMDKVY*VTGTRYYADHSDIIYHSHVTTLV*HSADAGHPLNRSQRP 167 L H M+ TG +Y + D IY ++ HS G+PLNR++RP Sbjct: 724 LGHEMNIPVAATGDVHYLNPEDKIYRK----ILIHS-QPGNPLNRTERP 767
>CD248_HUMAN (Q9HCU0) Endosialin precursor (Tumor endothelial marker 1) (CD248| antigen) Length = 757 Score = 28.1 bits (61), Expect = 9.9 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 2/56 (3%) Frame = +3 Query: 210 WPPPAT*PRVHLHE*NWNVEASWMMLLNPPMVETSISSTPTTMHPQL--ANHDALN 371 WPPP + PRV H +S + + P +V + + P+ P + A H AL+ Sbjct: 429 WPPPLSAPRVPYH-------SSVLSVTRPVVVSATHPTLPSAHQPPVIPATHPALS 477
>Y1615_STRT2 (Q5M323) UPF0348 protein stu1615| Length = 363 Score = 28.1 bits (61), Expect = 9.9 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = -2 Query: 186 ALTESLKVVGFDSEGDLHLRSVK 118 +L +S+ V+GF +G HL+SVK Sbjct: 296 SLPKSIHVLGFSQKGQFHLKSVK 318
>Y1615_STRT1 (Q5LYG0) UPF0348 protein str1615| Length = 363 Score = 28.1 bits (61), Expect = 9.9 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = -2 Query: 186 ALTESLKVVGFDSEGDLHLRSVK 118 +L +S+ V+GF +G HL+SVK Sbjct: 296 SLPKSIHVLGFSQKGQFHLKSVK 318
>SYNJ2_MOUSE (Q9D2G5) Synaptojanin-2 (EC 3.1.3.36) (Synaptic| inositol-1,4,5-trisphosphate 5-phosphatase 2) Length = 1434 Score = 28.1 bits (61), Expect = 9.9 Identities = 22/62 (35%), Positives = 27/62 (43%), Gaps = 1/62 (1%) Frame = +2 Query: 194 YIVGRMATSSYLAARAPSRIELER-GGVLDDAP*PAHGGNQHQQHPNNDAPPVGEPRRAQ 370 Y V ++ T++ A A R LE GGV + AP NQ P P PRR Sbjct: 1116 YNVKQIKTTNAQEAEAAIRCLLEASGGVPESAPGAIPLRNQGSSKPEATLGPPALPRRPA 1175 Query: 371 PR 376 PR Sbjct: 1176 PR 1177 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,393,659 Number of Sequences: 219361 Number of extensions: 1355551 Number of successful extensions: 3445 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 3318 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3445 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)