Clone Name | rbart41h08 |
---|---|
Clone Library Name | barley_pub |
>MYT1_XENLA (P70047) Myelin transcription factor 1 (X-MyT1)| Length = 1122 Score = 32.3 bits (72), Expect = 0.52 Identities = 13/44 (29%), Positives = 26/44 (59%) Frame = +3 Query: 219 PTEIKHQEVTLHACNRKKNRTPRDARNARPMERRKSIYCSIAMD 350 P+++ QEV+L +C + R +++ P+ +RKS +A+D Sbjct: 21 PSDLIEQEVSLESCPLSRKRKLQESEQENPLSKRKSHPLKLALD 64
>STK36_PONPY (Q5RAJ5) Serine/threonine-protein kinase 36 (EC 2.7.11.1) (Fused| homolog) Length = 1315 Score = 30.0 bits (66), Expect = 2.6 Identities = 14/50 (28%), Positives = 24/50 (48%) Frame = -2 Query: 212 GMFG*AKIAVD*EPLIWQELELYSLRIPAKPPQTEQGKCCFYLFLILVCI 63 G G + D +P+ W ++L PA+ T G C FY L+++ + Sbjct: 808 GQLGQQGVTFDLQPMEWMAAATHALSAPAEVRLTPPGSCGFYDGLLILLL 857
>STK36_HUMAN (Q9NRP7) Serine/threonine-protein kinase 36 (EC 2.7.11.1) (Fused| homolog) Length = 1315 Score = 30.0 bits (66), Expect = 2.6 Identities = 14/50 (28%), Positives = 24/50 (48%) Frame = -2 Query: 212 GMFG*AKIAVD*EPLIWQELELYSLRIPAKPPQTEQGKCCFYLFLILVCI 63 G G + D +P+ W ++L PA+ T G C FY L+++ + Sbjct: 808 GQLGQQGVTFDLQPMEWMAAATHALSAPAEVRLTPPGSCGFYDGLLILLL 857
>SSB_PSESM (Q889U1) Single-stranded DNA-binding protein (SSB)| (Helix-destabilizing protein) Length = 189 Score = 30.0 bits (66), Expect = 2.6 Identities = 18/61 (29%), Positives = 27/61 (44%) Frame = +2 Query: 128 QGFAGNIALIPAKSMALNPQQSLPNRTSPQTNGNQASRSNTPRM*QEKESDTERCTQRKA 307 QG GN + PQQS P +++PQ N NQ P+ + + ++ Q A Sbjct: 123 QGGGGNYNQSAPRPQQSRPQQSAPQQSAPQQNYNQ----QPPQQRDSRPAPQQQAPQPAA 178 Query: 308 D 310 D Sbjct: 179 D 179
>VIRD3_AGRTU (P09816) Protein virD3| Length = 201 Score = 30.0 bits (66), Expect = 2.6 Identities = 23/105 (21%), Positives = 42/105 (40%), Gaps = 1/105 (0%) Frame = +2 Query: 14 VTFTALKYQTQVQHIHGYTPESKTGKNNTCPVRFEEVWQGFAGNIALIPAKSMALNPQQS 193 + T L+Y H P S KN+ P ++ + AGN+ +++ + Q Sbjct: 64 IASTGLRYVAATLHWSEIAPLSLINKNDLAPAAYDFETRNDAGNVTAKVGRAVPVPKQGR 123 Query: 194 LPNRTSPQTNGNQASRSNTP-RM*QEKESDTERCTQRKADGTEEI 325 L + + SR N+ R+ + E+ E RK G+ + Sbjct: 124 LGKMLASVPLSTRISRVNSDRRLPTDAENHPETRDPRKGRGSHGV 168
>SAHH_ACIAD (Q6FA43) Adenosylhomocysteinase (EC 3.3.1.1)| (S-adenosyl-L-homocysteine hydrolase) (AdoHcyase) Length = 467 Score = 29.6 bits (65), Expect = 3.4 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 3/44 (6%) Frame = +2 Query: 8 EGVTFTAL---KYQTQVQHIHGYTPESKTGKNNTCPVRFEEVWQ 130 +G TAL KY T + HIHG T E+ TG R E+W+ Sbjct: 144 DGGDLTALVHEKYPTLLDHIHGITEETTTGVQ-----RLLEMWK 182
>WDR17_HUMAN (Q8IZU2) WD-repeat protein 17| Length = 1322 Score = 24.6 bits (52), Expect(2) = 6.8 Identities = 11/44 (25%), Positives = 21/44 (47%) Frame = +3 Query: 210 PLKPTEIKHQEVTLHACNRKKNRTPRDARNARPMERRKSIYCSI 341 PLK + + AC + NR+ D+ P + ++ IY ++ Sbjct: 1200 PLKIEYLSEELDAWRACTQSTNRSLEDSPYTPPSDSQRMIYATL 1243 Score = 22.3 bits (46), Expect(2) = 6.8 Identities = 11/30 (36%), Positives = 16/30 (53%) Frame = +1 Query: 64 IHTRIKNR*KQHLPCSV*GGLAGIRREYSS 153 +HT + R + + C G L IRR+Y S Sbjct: 1150 LHTCTEARNELLILCGYIGALLAIRRQYQS 1179
>PLMN_PETMA (P33574) Plasminogen (EC 3.4.21.7) (Fragments)| Length = 325 Score = 28.1 bits (61), Expect = 9.9 Identities = 15/51 (29%), Positives = 23/51 (45%) Frame = +2 Query: 2 GTEGVTFTALKYQTQVQHIHGYTPESKTGKNNTCPVRFEEVWQGFAGNIAL 154 G VT + L+ Q H H ++P+S G C + +G+ G AL Sbjct: 48 GAASVTRSGLRGDEQTPHRHTFSPQSFAGLTTAC---VKGTGEGYRGTAAL 95
>DIT1_YEAST (P21623) Spore wall maturation protein DIT1| Length = 536 Score = 28.1 bits (61), Expect = 9.9 Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 4/31 (12%) Frame = +3 Query: 165 NQWLLIH----SNLCLTEHPLKPTEIKHQEV 245 N W + H S L L+EHP+ E+K+ E+ Sbjct: 144 NNWFVYHILDQSQLSLSEHPIVTKEVKYHEL 174 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,928,116 Number of Sequences: 219361 Number of extensions: 1160797 Number of successful extensions: 3320 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 3214 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3315 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)