Clone Name | rbart41h01 |
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Clone Library Name | barley_pub |
No. | Definition | Score (bits) |
E Value |
1 | HPPD2_ASPFU (Q4WPV8) Probable 4-hydroxyphenylpyruvate dioxygenas... | 29 | 6.6 | 2 | ERF1_CRYHO (Q5CG95) Eukaryotic peptide chain release factor subu... | 29 | 8.6 |
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>HPPD2_ASPFU (Q4WPV8) Probable 4-hydroxyphenylpyruvate dioxygenase 2 (EC| 1.13.11.27) (4HPPD 2) (HPD 2) (HPPDase 2) Length = 406 Score = 29.3 bits (64), Expect = 6.6 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%) Frame = -1 Query: 145 DGRDEIVKE-DDCDNFINFNTIDQLNFLGPY 56 +G D IVK +DC NF + T+D LN G Y Sbjct: 216 NGVDPIVKYYEDCLNFHRYWTVDDLNMCGEY 246
>ERF1_CRYHO (Q5CG95) Eukaryotic peptide chain release factor subunit 1 (eRF1)| (Eukaryotic release factor 1) Length = 429 Score = 28.9 bits (63), Expect = 8.6 Identities = 14/28 (50%), Positives = 16/28 (57%) Frame = -1 Query: 181 FSFFGDVRRVKKDGRDEIVKEDDCDNFI 98 F FG + R K D +D V EDD D FI Sbjct: 402 FGGFGGILRYKVDFQDYAVVEDDLDEFI 429 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,027,968 Number of Sequences: 219361 Number of extensions: 952373 Number of successful extensions: 2004 Number of sequences better than 10.0: 2 Number of HSP's better than 10.0 without gapping: 1960 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2004 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3812186532 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)