>gb|AC135086.3| Mus musculus BAC clone RP23-110L10 from chromosome 15, complete
             sequence
          Length = 225159

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 88    tattgaaattgatgaagttgtc 109
             ||||||||||||||||||||||
Sbjct: 65302 tattgaaattgatgaagttgtc 65323

>gb|CP000020.1| Vibrio fischeri ES114 chromosome I, complete sequence
          Length = 2906179

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 87      gtattgaaattgatgaagttgt 108
               ||||||||||||||||||||||
Sbjct: 1324599 gtattgaaattgatgaagttgt 1324620

>emb|CR626927.1| Bacteroides fragilis NCTC 9343, complete genome
          Length = 5205140

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 19     catcttcttttctattcttat 39
              |||||||||||||||||||||
Sbjct: 787884 catcttcttttctattcttat 787864

>gb|AE005679.1| Caulobacter crescentus CB15 section 5 of 359 of the complete genome
          Length = 12370

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 381  gagctgatcgaactcagtagc 401
            |||||||||||||||||||||
Sbjct: 3885 gagctgatcgaactcagtagc 3865

>gb|AY043265.1| Epiphyas postvittana nucleopolyhedrovirus, complete genome
          Length = 118584

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 164   atcaccgaaaaaactaaattg 184
             |||||||||||||||||||||
Sbjct: 11752 atcaccgaaaaaactaaattg 11772

>dbj|AP006841.1| Bacteroides fragilis YCH46 DNA, complete genome
          Length = 5277274

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 19     catcttcttttctattcttat 39
              |||||||||||||||||||||
Sbjct: 848294 catcttcttttctattcttat 848274

>emb|AL136293.5|CNS01DVX Human chromosome 14 DNA sequence BAC C-2555C10 of library CalTech-D from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 226035

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 162    acatcaccgaaaaaactaaat 182
              |||||||||||||||||||||
Sbjct: 216534 acatcaccgaaaaaactaaat 216514

>emb|AL132801.5|CNS01DTN Human chromosome 14 DNA sequence BAC R-661D19 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 168624

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 162    acatcaccgaaaaaactaaat 182
              |||||||||||||||||||||
Sbjct: 161595 acatcaccgaaaaaactaaat 161615

>gb|AY768531.1| Neisseria gonorrhoeae MacA (macA) gene, complete cds
          Length = 1179

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 170 gaaaaaactaaattggaaacgtat 193
           |||||| |||||||||||||||||
Sbjct: 301 gaaaaatctaaattggaaacgtat 324

>gb|AE014843.1| Plasmodium falciparum 3D7 chromosome 11 section 8 of 8 of the complete
              sequence
          Length = 271546

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 114    tcatcttcttttactatttc 133
              ||||||||||||||||||||
Sbjct: 187510 tcatcttcttttactatttc 187491

>ref|XM_710046.1| Candida albicans SC5314 putative essential nuclear protein
           (CaO19.4363), mRNA
          Length = 3036

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 agtcatcttcttttactatt 131
           ||||||||||||||||||||
Sbjct: 628 agtcatcttcttttactatt 609

>ref|XM_709995.1| Candida albicans SC5314 putative essential nuclear protein
           (CaO19.11841), mRNA
          Length = 2514

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 112 agtcatcttcttttactatt 131
           ||||||||||||||||||||
Sbjct: 628 agtcatcttcttttactatt 609

>gb|AF202180.3| Plasmodium falciparum erythrocyte membrane-associated giant protein
            antigen 332 gene, complete cds
          Length = 16377

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 114  tcatcttcttttactatttc 133
            ||||||||||||||||||||
Sbjct: 2135 tcatcttcttttactatttc 2116

>emb|CR954247.1| Pseudoalteromonas haloplanktis str. TAC125 chromosome II, complete
              sequence
          Length = 635328

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     tattgaaattgatgaagttg 107
              ||||||||||||||||||||
Sbjct: 415736 tattgaaattgatgaagttg 415755

>gb|AF438419.1| Lactobacillus sakei plasmid pRV500, complete sequence
          Length = 12959

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                              
Query: 52 aaaaataaggccctaaaaaa 71
          ||||||||||||||||||||
Sbjct: 80 aaaaataaggccctaaaaaa 99

>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence
          Length = 4895836

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 435     ccaccggcacgtcgctgaac 454
               ||||||||||||||||||||
Sbjct: 3545835 ccaccggcacgtcgctgaac 3545854

>emb|CR380955.1| Candida glabrata strain CBS138 chromosome I complete sequence
          Length = 1089401

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 20     atcttcttttctattcttat 39
              ||||||||||||||||||||
Sbjct: 649285 atcttcttttctattcttat 649304

>emb|BX640452.1| Bordetella bronchiseptica strain RB50, complete genome; segment 16/16
          Length = 123385

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 426   gcgggtcgtccaccggcacgtcgc 449
             |||||| |||||||||||||||||
Sbjct: 68390 gcgggtggtccaccggcacgtcgc 68367

>emb|BX640436.1| Bordetella parapertussis strain 12822, complete genome; segment 14/14
          Length = 255260

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 426    gcgggtcgtccaccggcacgtcgc 449
              |||||| |||||||||||||||||
Sbjct: 204218 gcgggtggtccaccggcacgtcgc 204195

>emb|BX640412.1| Bordetella pertussis strain Tohama I, complete genome; segment 2/12
          Length = 348171

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 426    gcgggtcgtccaccggcacgtcgc 449
              |||||| |||||||||||||||||
Sbjct: 130345 gcgggtggtccaccggcacgtcgc 130322

>gb|AC108074.3| Homo sapiens BAC clone RP11-717H13 from 4, complete sequence
          Length = 128635

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 239   tggttttgtatagcttcacttgtt 262
             |||||||||||||||||| |||||
Sbjct: 15538 tggttttgtatagcttcagttgtt 15561

>gb|AF200347.2|AF200347 Lactobacillus casei plasmid pRC18, complete sequence
          Length = 18101

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 52   aaaaataaggccctaaaaaa 71
            ||||||||||||||||||||
Sbjct: 3005 aaaaataaggccctaaaaaa 3024

>gb|AC010220.5| Homo sapiens chromosome 5 clone CTC-254O18, complete sequence
          Length = 29439

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 22    cttcttttctattcttatgc 41
             ||||||||||||||||||||
Sbjct: 10219 cttcttttctattcttatgc 10238

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 464      ccggtgtagaacccagcgaagtcg 487
                |||||||||||||| |||||||||
Sbjct: 20649038 ccggtgtagaacccggcgaagtcg 20649061



 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 425     ggcgggtcgtccaccggcac 444
               ||||||||||||||||||||
Sbjct: 1971183 ggcgggtcgtccaccggcac 1971164

>dbj|AB084455.2| Colwellia maris dnaK, dnaJ genes for Heat shock protein 70, Heat
           shock protein 40, complete cds
          Length = 4104

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tattgaaattgatgaagttg 107
           ||||||||||||||||||||
Sbjct: 979 tattgaaattgatgaagttg 998

>gb|AC113346.2| Homo sapiens chromosome 5 clone CTD-2532K18, complete sequence
          Length = 175075

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 22     cttcttttctattcttatgc 41
              ||||||||||||||||||||
Sbjct: 123934 cttcttttctattcttatgc 123953

>dbj|AB167897.1| Lactobacillus brevis plasmid pRH45 horA gene for multidrug
            transporter HorA, complete cds
          Length = 15136

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 52   aaaaataaggccctaaaaaa 71
            ||||||||||||||||||||
Sbjct: 7588 aaaaataaggccctaaaaaa 7569

>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0548D03
          Length = 156709

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 425   ggcgggtcgtccaccggcac 444
             ||||||||||||||||||||
Sbjct: 99963 ggcgggtcgtccaccggcac 99944

>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0427B07
          Length = 172058

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 464   ccggtgtagaacccagcgaagtcg 487
             |||||||||||||| |||||||||
Sbjct: 71445 ccggtgtagaacccggcgaagtcg 71468

>dbj|AB005234.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MBK5
          Length = 89779

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    tttctattcttatgcacatc 46
             ||||||||||||||||||||
Sbjct: 37240 tttctattcttatgcacatc 37259

>gb|AC164420.4| Mus musculus chromosome 8, clone RP24-388L13, complete sequence
          Length = 174120

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 104  gttgtcacagtcatcttctt 123
            ||||||||||||||||||||
Sbjct: 8139 gttgtcacagtcatcttctt 8158

>gb|AC140446.5| Mus musculus BAC clone RP24-114J11 from chromosome 8, complete sequence
          Length = 152392

 Score = 40.1 bits (20), Expect = 6.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   gttgtcacagtcatcttctt 123
             ||||||||||||||||||||
Sbjct: 76421 gttgtcacagtcatcttctt 76440


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,479,274
Number of Sequences: 3902068
Number of extensions: 4479274
Number of successful extensions: 77656
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 77460
Number of HSP's gapped (non-prelim): 196
length of query: 514
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 491
effective length of database: 17,143,297,704
effective search space: 8417359172664
effective search space used: 8417359172664
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)