ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | rbart41g12 |
|---|---|
| Clone Library Name | barley_pub |
>GID1_ORYSA (Q6L545) Gibberellin receptor GID1 (EC 3.-.-.-)| (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) Length = 354 Score = 45.8 bits (107), Expect = 5e-05 Identities = 31/95 (32%), Positives = 41/95 (43%) Frame = -2 Query: 435 WHMSLPVGATRDHPVANPFGXXXXXXXXXXXXXXXXXXXLGDVLRDRVLGYAARLKDMGK 256 W LP A RDHP NPFG D+ DR L YA L++ G Sbjct: 255 WKAYLPEDADRDHPACNPFGPNGRRLGGLPFAKSLIIVSGLDLTCDRQLAYADALREDGH 314 Query: 255 GVELVEFEGQQHGFSVLQPFGVAADELMRVLRRFV 151 V++V+ E GF +L P V E+M + F+ Sbjct: 315 HVKVVQCENATVGFYLL-PNTVHYHEVMEEISDFL 348
>GI1L1_ARATH (Q9MAA7) Probable gibberellin receptor GID1L1 (EC 3.-.-.-)| (GID1-like protein 1) Length = 345 Score = 43.5 bits (101), Expect = 3e-04 Identities = 25/77 (32%), Positives = 32/77 (41%) Frame = -2 Query: 435 WHMSLPVGATRDHPVANPFGXXXXXXXXXXXXXXXXXXXLGDVLRDRVLGYAARLKDMGK 256 W LP G R+HP NPF D++RD L YA LK G+ Sbjct: 248 WKAFLPEGEDREHPACNPFSPRGKSLEGVSFPKSLVVVAGLDLIRDWQLAYAEGLKKAGQ 307 Query: 255 GVELVEFEGQQHGFSVL 205 V+L+ E GF +L Sbjct: 308 EVKLMHLEKATVGFYLL 324
>GI1L3_ARATH (Q940G6) Probable gibberellin receptor GID1L3 (EC 3.-.-.-)| (GID1-like protein 3) Length = 344 Score = 41.6 bits (96), Expect = 0.001 Identities = 24/77 (31%), Positives = 33/77 (42%) Frame = -2 Query: 435 WHMSLPVGATRDHPVANPFGXXXXXXXXXXXXXXXXXXXLGDVLRDRVLGYAARLKDMGK 256 W LP G R+HP +PFG D+++D L YA LK G+ Sbjct: 246 WRAFLPEGEDREHPACSPFGPRSKSLEGLSFPKSLVVVAGLDLIQDWQLKYAEGLKKAGQ 305 Query: 255 GVELVEFEGQQHGFSVL 205 V+L+ E GF +L Sbjct: 306 EVKLLYLEQATIGFYLL 322
>GI1L2_ARATH (Q9LYC1) Probable gibberellin receptor GID1L2 (EC 3.-.-.-)| (GID1-like protein 2) Length = 358 Score = 40.8 bits (94), Expect = 0.002 Identities = 30/96 (31%), Positives = 37/96 (38%) Frame = -2 Query: 435 WHMSLPVGATRDHPVANPFGXXXXXXXXXXXXXXXXXXXLGDVLRDRVLGYAARLKDMGK 256 W LP G RDHP NPFG D+++D L Y LK G Sbjct: 248 WRAYLPEGEDRDHPACNPFGPRGQSLKGVNFPKSLVVVAGLDLVQDWQLAYVDGLKKTGL 307 Query: 255 GVELVEFEGQQHGFSVLQPFGVAADELMRVLRRFVY 148 V L+ + GF L P LM L +FV+ Sbjct: 308 EVNLLYLKQATIGFYFL-PNNDHFHCLMEELNKFVH 342
>ADRB1_FELCA (Q9TST6) Beta-1 adrenergic receptor (Beta-1 adrenoceptor) (Beta-1| adrenoreceptor) Length = 474 Score = 34.7 bits (78), Expect = 0.13 Identities = 17/30 (56%), Positives = 18/30 (60%) Frame = +3 Query: 372 PARTDSPPGGPWSPRPEATCARAARTSPQA 461 PAR SP P SPRP AT A AA +P A Sbjct: 269 PARPPSPAPAPGSPRPAATAAAAAAAAPLA 298
>RCMNS_SHIFL (P69505) Regulator of cell morphogenesis and NO signaling (RCMNS)| Length = 220 Score = 33.1 bits (74), Expect = 0.37 Identities = 25/96 (26%), Positives = 42/96 (43%) Frame = +1 Query: 175 QLVGRHAERLKDREAMLLSLELDKLDAFPHVLEPRRVPEHAVTEHVAQRRHDESRRELHR 354 Q + R A R K+ + ++ EL KL P + R P + +H+ R HD R +L Sbjct: 35 QTLARAAAR-KELDVEVIEAELAKLAEQPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPE 93 Query: 355 CEAGALRPERIRHRVVPGRPDRKRHVPELLAHLHRQ 462 A + ER+ +P + + + L LH + Sbjct: 94 LILQATKVERVH----ADKPSVPKGLTKYLTMLHEE 125
>RCMNS_ECOLI (P69506) Regulator of cell morphogenesis and NO signaling (RCMNS)| Length = 220 Score = 33.1 bits (74), Expect = 0.37 Identities = 25/96 (26%), Positives = 42/96 (43%) Frame = +1 Query: 175 QLVGRHAERLKDREAMLLSLELDKLDAFPHVLEPRRVPEHAVTEHVAQRRHDESRRELHR 354 Q + R A R K+ + ++ EL KL P + R P + +H+ R HD R +L Sbjct: 35 QTLARAAAR-KELDVEVIEAELAKLAEQPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPE 93 Query: 355 CEAGALRPERIRHRVVPGRPDRKRHVPELLAHLHRQ 462 A + ER+ +P + + + L LH + Sbjct: 94 LILQATKVERVH----ADKPSVPKGLTKYLTMLHEE 125
>RCMNS_ECOL6 (Q8FAH0) Regulator of cell morphogenesis and NO signaling (RCMNS)| Length = 220 Score = 32.7 bits (73), Expect = 0.48 Identities = 25/96 (26%), Positives = 42/96 (43%) Frame = +1 Query: 175 QLVGRHAERLKDREAMLLSLELDKLDAFPHVLEPRRVPEHAVTEHVAQRRHDESRRELHR 354 Q + R A R K+ + ++ EL KL P + R P + +H+ R HD R +L Sbjct: 35 QTLARAAAR-KELDVDVIEAELAKLAEQPIEKDWRSAPLAEIIDHIIVRYHDRHREQLPE 93 Query: 355 CEAGALRPERIRHRVVPGRPDRKRHVPELLAHLHRQ 462 A + ER+ +P + + + L LH + Sbjct: 94 LILQATKVERVH----ADKPSVPKGLTKYLTMLHEE 125
>SON_HUMAN (P18583) SON protein (SON3) (Negative regulatory element-binding| protein) (NRE-binding protein) (DBP-5) (Bax antagonist selected in saccharomyces 1) (BASS1) Length = 2426 Score = 32.0 bits (71), Expect = 0.82 Identities = 32/125 (25%), Positives = 44/125 (35%) Frame = +1 Query: 58 SSYRNIKNTVISRDHHSPRRTSASSGRVALVHEPPEDSHQLVGRHAERLKDREAMLLSLE 237 SS R+ S +H S +RTS S R A SH+ R R + R S Sbjct: 1820 SSLRSRSKRSKSSEHKSRKRTSESRSR-ARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRS 1878 Query: 238 LDKLDAFPHVLEPRRVPEHAVTEHVAQRRHDESRRELHRCEAGALRPERIRHRVVPGRPD 417 + + +R P+H +R+ SR A + P R P R Sbjct: 1879 KSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRR 1938 Query: 418 RKRHV 432 R R V Sbjct: 1939 RSRSV 1943
>RCMNS_SALTY (Q8ZK76) Regulator of cell morphogenesis and NO signaling (RCMNS)| Length = 220 Score = 32.0 bits (71), Expect = 0.82 Identities = 25/96 (26%), Positives = 43/96 (44%) Frame = +1 Query: 175 QLVGRHAERLKDREAMLLSLELDKLDAFPHVLEPRRVPEHAVTEHVAQRRHDESRRELHR 354 Q + R A R D + ++ +L +L P + R VP + +H+ R HD R +L Sbjct: 35 QTLARAAAR-HDVDIDIIEAQLAQLAEQPIEKDWRAVPLADIIDHIVVRYHDRHREQLPE 93 Query: 355 CEAGALRPERIRHRVVPGRPDRKRHVPELLAHLHRQ 462 A + ER+ +P+ R + + L LH + Sbjct: 94 LILQATKVERVH----ADKPNVPRGLTKYLTALHEE 125
>RCMNS_SALTI (Q8Z157) Regulator of cell morphogenesis and NO signaling (RCMNS)| Length = 220 Score = 32.0 bits (71), Expect = 0.82 Identities = 25/96 (26%), Positives = 43/96 (44%) Frame = +1 Query: 175 QLVGRHAERLKDREAMLLSLELDKLDAFPHVLEPRRVPEHAVTEHVAQRRHDESRRELHR 354 Q + R A R D + ++ +L +L P + R VP + +H+ R HD R +L Sbjct: 35 QTLARAAAR-HDVDIDIIEAQLAQLAEQPIEKDWRAVPLADIIDHIVVRYHDRHREQLPE 93 Query: 355 CEAGALRPERIRHRVVPGRPDRKRHVPELLAHLHRQ 462 A + ER+ +P+ R + + L LH + Sbjct: 94 LILQATKVERVH----ADKPNVPRGLTKYLTALHEE 125
>RCMNS_SALPA (Q5PJ71) Regulator of cell morphogenesis and NO signaling (RCMNS)| Length = 220 Score = 32.0 bits (71), Expect = 0.82 Identities = 25/96 (26%), Positives = 43/96 (44%) Frame = +1 Query: 175 QLVGRHAERLKDREAMLLSLELDKLDAFPHVLEPRRVPEHAVTEHVAQRRHDESRRELHR 354 Q + R A R D + ++ +L +L P + R VP + +H+ R HD R +L Sbjct: 35 QTLARAAAR-HDVDIDIIEAQLAQLAEQPIEKDWRAVPLADIIDHIVVRYHDRHREQLPE 93 Query: 355 CEAGALRPERIRHRVVPGRPDRKRHVPELLAHLHRQ 462 A + ER+ +P+ R + + L LH + Sbjct: 94 LILQATKVERVH----ADKPNVPRGLTKYLTALHEE 125
>STK10_HUMAN (O94804) Serine/threonine-protein kinase 10 (EC 2.7.11.1)| (Lymphocyte-oriented kinase) Length = 968 Score = 31.6 bits (70), Expect = 1.1 Identities = 15/67 (22%), Positives = 34/67 (50%) Frame = +1 Query: 196 ERLKDREAMLLSLELDKLDAFPHVLEPRRVPEHAVTEHVAQRRHDESRRELHRCEAGALR 375 E L+DREA L +E +L +++ + ++ + H R+H++ R ++ R + Sbjct: 734 ELLRDREAALWEMEEHQLQERHQLVKQQLKDQYFLQRHELLRKHEKEREQMQRYNQRMIE 793 Query: 376 PERIRHR 396 ++R + Sbjct: 794 QLKVRQQ 800
>STK10_MOUSE (O55098) Serine/threonine-protein kinase 10 (EC 2.7.11.1)| (Lymphocyte-oriented kinase) Length = 966 Score = 31.6 bits (70), Expect = 1.1 Identities = 15/72 (20%), Positives = 36/72 (50%) Frame = +1 Query: 181 VGRHAERLKDREAMLLSLELDKLDAFPHVLEPRRVPEHAVTEHVAQRRHDESRRELHRCE 360 + + E L+DREA L +E +L +++ + ++ + H R+H++ R ++ R Sbjct: 728 LSKKQELLRDREAALWEMEEHQLQERHQLVKQQLKDQYFLQRHDLLRKHEKEREQMQRYN 787 Query: 361 AGALRPERIRHR 396 + ++R + Sbjct: 788 QRMMEQLKVRQQ 799
>SFR15_RAT (Q63627) Splicing factor, arginine/serine-rich 15 (CTD-binding| SR-like protein RA4) (Fragment) Length = 1048 Score = 31.2 bits (69), Expect = 1.4 Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 8/67 (11%) Frame = +1 Query: 259 PHVLEPRR----VPEHAVTE---HVAQRRHDESRRELHRCEAGALRPERIRHRVVPGRP- 414 PH +P + V + VTE HV + R SR R R R RHR R Sbjct: 322 PHSQKPHQQEMEVEQPCVTEVKRHVPESRKSRSRSPKRRRSRSGSRSRRSRHRRSRSRSR 381 Query: 415 DRKRHVP 435 DR+RH P Sbjct: 382 DRRRHSP 388
>APOA5_RAT (Q9QUH3) Apolipoprotein A-V precursor (Apolipoprotein A5) (ApoAV)| (ApoA-V) (Regeneration-associated protein 3) Length = 367 Score = 31.2 bits (69), Expect = 1.4 Identities = 22/93 (23%), Positives = 42/93 (45%) Frame = +1 Query: 163 EDSHQLVGRHAERLKDREAMLLSLELDKLDAFPHVLEPRRVPEHAVTEHVAQRRHDESRR 342 +D H + R+ ++L+D + + + D D L+P+ + + V + + RHD + Sbjct: 235 KDLHTSIQRNLDQLRDELSTFIRVSTDGADNRDS-LDPQALSDE-VRQRLQAFRHDTYLQ 292 Query: 343 ELHRCEAGALRPERIRHRVVPGRPDRKRHVPEL 441 +A E I+H++ P P PEL Sbjct: 293 IAAFTQAIDQETEEIQHQLAPPPPSHSAFAPEL 325
>APOA5_MOUSE (Q8C7G5) Apolipoprotein A-V precursor (Apolipoprotein A5) (ApoAV)| (ApoA-V) (Regeneration-associated protein 3) Length = 368 Score = 30.8 bits (68), Expect = 1.8 Identities = 22/93 (23%), Positives = 42/93 (45%) Frame = +1 Query: 163 EDSHQLVGRHAERLKDREAMLLSLELDKLDAFPHVLEPRRVPEHAVTEHVAQRRHDESRR 342 +D H + R+ ++L+D + + + D + L+P+ + E V + + RHD + Sbjct: 235 KDLHTSIQRNLDQLRDELSAFIRVSTDGAEDGDS-LDPQALSEE-VRQRLQAFRHDTYLQ 292 Query: 343 ELHRCEAGALRPERIRHRVVPGRPDRKRHVPEL 441 +A E I+H++ P P PEL Sbjct: 293 IAAFTQAIDQETEEIQHQLAPPPPSHSAFAPEL 325
>CAPP_GLOVI (Q7NNJ7) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)| (PEPC) Length = 939 Score = 30.8 bits (68), Expect = 1.8 Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 17/107 (15%) Frame = +1 Query: 187 RHAERLKDR---------EAMLLSLELDKLD--------AFPHVLEPRRVPEHAVTEHVA 315 + ERL+D + +LL+LE D+ D + ++ EP R+ + E + Sbjct: 293 KSVERLRDLLSLAEGNPPQDLLLALEQDQRDLGEVYERYSVVYLQEPYRLKLSYILERLE 352 Query: 316 QRRHDESRRELHRCEAGALRPERIRHRVVPGRPDRKRHVPELLAHLH 456 R + E+H P+R+ PG RH ELLA LH Sbjct: 353 HTRERNAWLEVHG-------PQRLSQPDEPGWLHYYRHAHELLAELH 392
>ISPE_STRAW (Q820G3) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 297 Score = 30.4 bits (67), Expect = 2.4 Identities = 25/68 (36%), Positives = 28/68 (41%), Gaps = 7/68 (10%) Frame = -1 Query: 268 GHGERRRACRVRGTAAWLLCPSAVRRGG-------RRVDASPQAVRVPGRHARWMLMYVL 110 G GER R V GT W+ AV GG D + VRVP A L+ L Sbjct: 151 GRGERLRELEVGGTFHWVF---AVADGGLSTPAVYGEFDRLSEGVRVPEPVASQELLDAL 207 Query: 109 VNGDLVIL 86 GD V L Sbjct: 208 AKGDAVAL 215
>EBNA2_EBV (P12978) Epstein-Barr nuclear antigen 2 (EBV nuclear antigen 2)| (EBNA-2) Length = 487 Score = 30.0 bits (66), Expect = 3.1 Identities = 11/26 (42%), Positives = 12/26 (46%) Frame = +3 Query: 393 PGGPWSPRPEATCARAARTSPQAGTH 470 PGGPW P P + SP G H Sbjct: 367 PGGPWRPEPNTSSPSMPELSPVLGLH 392
>EBNA2_EBVG (Q3KSV2) Epstein-Barr nuclear antigen 2 (EBV nuclear antigen 2)| (EBNA-2) (EBNA2) Length = 451 Score = 30.0 bits (66), Expect = 3.1 Identities = 11/26 (42%), Positives = 12/26 (46%) Frame = +3 Query: 393 PGGPWSPRPEATCARAARTSPQAGTH 470 PGGPW P P + SP G H Sbjct: 331 PGGPWRPEPNTSSPSMPELSPVLGLH 356
>RCMNS_ECO57 (Q8XCH9) Regulator of cell morphogenesis and NO signaling (RCMNS)| Length = 220 Score = 30.0 bits (66), Expect = 3.1 Identities = 24/96 (25%), Positives = 41/96 (42%) Frame = +1 Query: 175 QLVGRHAERLKDREAMLLSLELDKLDAFPHVLEPRRVPEHAVTEHVAQRRHDESRRELHR 354 Q + R A R K+ + ++ EL KL P + R P + +H+ R H R +L Sbjct: 35 QTLARAAAR-KELDVEVIEAELAKLAEQPIEKDWRSAPLAEIIDHIIVRYHARHREQLPE 93 Query: 355 CEAGALRPERIRHRVVPGRPDRKRHVPELLAHLHRQ 462 A + ER+ +P + + + L LH + Sbjct: 94 LILQATKVERVH----ADKPSVPKGLTKYLTMLHEE 125
>VNUA_PRVKA (P33485) Probable nuclear antigen| Length = 1733 Score = 27.3 bits (59), Expect(2) = 3.8 Identities = 22/72 (30%), Positives = 30/72 (41%) Frame = +1 Query: 94 RDHHSPRRTSASSGRVALVHEPPEDSHQLVGRHAERLKDREAMLLSLELDKLDAFPHVLE 273 RDH P RT H PP + + + +D +L + L + D PH+L Sbjct: 93 RDHLPPTRTRRDHQ-----HRPPPTTTTTTIKDPQHPQD-PLLLPTKTLQEED--PHLLR 144 Query: 274 PRRVPEHAVTEH 309 P R P A T H Sbjct: 145 PTRDPPSAKTHH 156 Score = 20.8 bits (42), Expect(2) = 3.8 Identities = 8/20 (40%), Positives = 12/20 (60%) Frame = +3 Query: 384 DSPPGGPWSPRPEATCARAA 443 D P GGP SP P + + ++ Sbjct: 176 DPPGGGPPSPPPRPSTSSSS 195
>YMH7_CAEEL (P34474) Hypothetical protein F58A4.7 in chromosome III| Length = 431 Score = 29.6 bits (65), Expect = 4.1 Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 9/81 (11%) Frame = +1 Query: 109 PRRTSASSGRVALVHEPPEDSHQLVGRHAERLKD-REAMLLSLELDKLDA--------FP 261 PR+ + A++ + + HQL+G E + D E L LE D DA Sbjct: 140 PRKEGEKLSKAAILQQTADMVHQLLGHKGEDIPDGGEPKKLKLEEDHHDADHQAQIAHLQ 199 Query: 262 HVLEPRRVPEHAVTEHVAQRR 324 +LE R A+ V Q R Sbjct: 200 TILETERAARKALESQVIQLR 220
>LRC27_MOUSE (Q80YS5) Leucine-rich repeat-containing protein 27| Length = 523 Score = 29.3 bits (64), Expect = 5.3 Identities = 20/57 (35%), Positives = 30/57 (52%) Frame = +1 Query: 190 HAERLKDREAMLLSLELDKLDAFPHVLEPRRVPEHAVTEHVAQRRHDESRRELHRCE 360 HA R++D L EL + + VLE RR + A+ E Q +H +RREL + + Sbjct: 336 HANRMEDTHKAALQ-ELQEKET---VLEQRRRDKRALQEWREQTQHMRTRRELSKLQ 388
>TPS3_YEAST (P38426) Trehalose synthase complex regulatory subunit TPS3| (Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 115 kDa subunit) Length = 1054 Score = 29.3 bits (64), Expect = 5.3 Identities = 17/41 (41%), Positives = 22/41 (53%) Frame = +1 Query: 19 SMTLLRSSEH*NSSSYRNIKNTVISRDHHSPRRTSASSGRV 141 S++ RSS H N S +KN +S D H PR S+S V Sbjct: 157 SISASRSSAHHNDLSSSLMKNPNLSFDSHPPRVRSSSKSAV 197
>OPGH_RHOPA (Q6N5U3) Glucans biosynthesis glucosyltransferase H (EC 2.4.1.-)| Length = 721 Score = 29.3 bits (64), Expect = 5.3 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 5/70 (7%) Frame = +1 Query: 211 REAMLLSLELDKLD-----AFPHVLEPRRVPEHAVTEHVAQRRHDESRRELHRCEAGALR 375 R LL + +++D A H L R P + T+ ++ R D RELH A A Sbjct: 595 RSRPLLMMTPEQIDPPAILAQVHALADRLCPANQTTDPLSALRGDRRLRELH-LAALAFH 653 Query: 376 PERIRHRVVP 405 P R R R+ P Sbjct: 654 PPRRRGRIDP 663
>ZIC4_HUMAN (Q8N9L1) Zinc finger protein ZIC 4 (Zinc finger protein of the| cerebellum 4) Length = 334 Score = 29.3 bits (64), Expect = 5.3 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 3/39 (7%) Frame = +1 Query: 64 YRN-IKNTVISRDHHSPRRTSASSGRV--ALVHEPPEDS 171 YRN +K + S HH P+ T+ASS V L EPP+ S Sbjct: 16 YRNTLKESSSSSGHHGPQLTAASSPSVFPGLHEEPPQAS 54
>SON_MOUSE (Q9QX47) SON protein| Length = 2404 Score = 29.3 bits (64), Expect = 5.3 Identities = 30/121 (24%), Positives = 42/121 (34%) Frame = +1 Query: 58 SSYRNIKNTVISRDHHSPRRTSASSGRVALVHEPPEDSHQLVGRHAERLKDREAMLLSLE 237 SS R+ S +H S +RTS S R A SH+ R R + R S Sbjct: 1805 SSLRSRSKRSKSSEHKSRKRTSESRSR-ARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRS 1863 Query: 238 LDKLDAFPHVLEPRRVPEHAVTEHVAQRRHDESRRELHRCEAGALRPERIRHRVVPGRPD 417 + + +R P+H +R+ SR A + P R P R Sbjct: 1864 KSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKAARARSRTPSRRSRSHTPSRRR 1923 Query: 418 R 420 R Sbjct: 1924 R 1924
>SYI_GEOSL (Q747X9) Isoleucyl-tRNA synthetase (EC 6.1.1.5) (Isoleucine--tRNA| ligase) (IleRS) Length = 923 Score = 28.9 bits (63), Expect = 6.9 Identities = 10/26 (38%), Positives = 13/26 (50%) Frame = -2 Query: 459 PVEMCEQLWHMSLPVGATRDHPVANP 382 P E CE+ WH +G +HP P Sbjct: 891 PGEKCERCWHYDEEIGGDSEHPTLCP 916
>YL53_CAEEL (P34433) Hypothetical protein F44E2.3| Length = 244 Score = 28.9 bits (63), Expect = 6.9 Identities = 24/113 (21%), Positives = 51/113 (45%), Gaps = 2/113 (1%) Frame = +1 Query: 139 VALVHEPPED--SHQLVGRHAERLKDREAMLLSLELDKLDAFPHVLEPRRVPEHAVTEHV 312 V+ ++EP + ++V + + R+ EAM+ + +L + E AV Sbjct: 99 VSTLNEPTKKWLEEKIVEQVSARVHQLEAMMAEKATSARNEMEKMLRAQIEAEMAVELAE 158 Query: 313 AQRRHDESRRELHRCEAGALRPERIRHRVVPGRPDRKRHVPELLAHLHRQGHI 471 ++R +ESR++ + EA + +V+ RK+ + LA L ++ + Sbjct: 159 CKKRDEESRKKCKQLEA------ELERKVLEAEESRKKFEEDRLAMLEQKSQL 205
>ALMS1_HUMAN (Q8TCU4) Alstrom syndrome protein 1| Length = 4167 Score = 28.5 bits (62), Expect = 9.1 Identities = 33/133 (24%), Positives = 53/133 (39%), Gaps = 6/133 (4%) Frame = +1 Query: 55 SSSYRNIKNTVISRDHHSPRRTSASSGRVALVHEPPEDSHQLVGRHAERLKDREAMLLSL 234 S+SY + + ++S P T A ++ V P + + + RE ++S Sbjct: 1802 STSYSHREKPIVSYQRELPHFTEAGL-KILRVPGPADQKTGINILPSNSYPQREHSVISY 1860 Query: 235 ELDKLDAFPHVLEPRRVPEHAVTEHVAQRRHDES--RRE----LHRCEAGALRPERIRHR 396 E + D L+ VP A + Q S RE H+ E + E + Sbjct: 1861 EQELPDLTEVTLKAIGVPGPADQKTGIQIASSSSYSNREKASIFHQQELPDVTEEALNVF 1920 Query: 397 VVPGRPDRKRHVP 435 VVPG+ DRK +P Sbjct: 1921 VVPGQGDRKTEIP 1933
>PHK2_ANASP (Q8YTZ6) Probable phosphoketolase 2 (EC 4.1.2.-)| Length = 793 Score = 28.5 bits (62), Expect = 9.1 Identities = 13/42 (30%), Positives = 21/42 (50%) Frame = -2 Query: 234 EGQQHGFSVLQPFGVAADELMRVLRRFVYQGDTPAGC*CTSW 109 EG + G++++ FG A D ++ V G+ G TSW Sbjct: 148 EGGELGYALVHAFGAAFDNPDLIVAAVVGDGEAETGALATSW 189
>SYV_RHIME (Q92Q37) Valyl-tRNA synthetase (EC 6.1.1.9) (Valine--tRNA ligase)| (ValRS) Length = 947 Score = 28.5 bits (62), Expect = 9.1 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 2/26 (7%) Frame = -2 Query: 459 PVEMCEQLWHMSLPV--GATRDHPVA 388 PVE+ LWH+ P+ G T HPVA Sbjct: 193 PVEVNGHLWHLRYPLEEGVTYQHPVA 218 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 65,339,110 Number of Sequences: 219361 Number of extensions: 1233666 Number of successful extensions: 5526 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 5121 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 5517 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3072927439 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
