Clone Name | rbart41g11 |
---|---|
Clone Library Name | barley_pub |
>P2SAF_ARATH (O82660) Photosystem II stability/assembly factor HCF136,| chloroplast precursor Length = 403 Score = 33.5 bits (75), Expect = 0.24 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%) Frame = -1 Query: 369 WRPQ---VVRESQEQGDRCACR*GGNLWCNLHGGRIYRSRGTSVGDSLVSVAGQSR 211 W+P V R Q G R G LW + GG +Y S+GT + + V QSR Sbjct: 280 WQPHNRAVARRIQNMGWRA----DGGLWLLVRGGGLYLSKGTGITEEFEEVPVQSR 331
>CAKI_DROME (Q24210) Calcium/calmodulin-dependent protein kinase (EC 2.7.11.17)| (CAKI) (Peripheral plasma membrane protein CaMGUK) Length = 898 Score = 30.8 bits (68), Expect = 1.5 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = -1 Query: 288 LHGGRIYRSRGTSVGDSLVSVAGQSRQHRS 199 +HGG I+R VGD + + GQ QH+S Sbjct: 524 MHGGMIHRQATLHVGDEIREINGQPVQHQS 553
>M4K4_HUMAN (O95819) Mitogen-activated protein kinase kinase kinase kinase 4| (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 4) (MEK kinase kinase 4) (MEKKK 4) (HPK/GCK-like kinase HGK) (Nck-interacting kinase) Length = 1239 Score = 29.6 bits (65), Expect = 3.4 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +1 Query: 268 VDPSTMKVAPQISSSSAGTAVTLFLGFSYDLRPPRAFQ*KQPCGKGA 408 +DP ++++P S+GT VT +GFS D P A + + P KG+ Sbjct: 860 IDPRLLQISP-----SSGTTVTSVVGFSCDGMRPEAIR-QDPTRKGS 900
>PROP_CAVPO (Q64181) Properdin precursor (Factor P)| Length = 470 Score = 29.6 bits (65), Expect = 3.4 Identities = 19/62 (30%), Positives = 26/62 (41%) Frame = -1 Query: 222 GQSRQHRSCVGGGGVI*CNKARVLLSLVILWELFGCVSDHLYL*LFKFSQWIQDRPFSVE 43 G +HR C+G GG NKA L W+L C + +S W P +V Sbjct: 95 GSQLRHRRCIGWGGQCSENKAPGTLE----WQLQACEEQQCCPEMGGWSNWEPWGPCTVT 150 Query: 42 CN 37 C+ Sbjct: 151 CS 152
>M4K4_MOUSE (P97820) Mitogen-activated protein kinase kinase kinase kinase 4| (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 4) (MEK kinase kinase 4) (MEKKK 4) (HPK/GCK-like kinase HGK) (Nck-interacting kinase) Length = 1233 Score = 29.3 bits (64), Expect = 4.4 Identities = 17/47 (36%), Positives = 27/47 (57%) Frame = +1 Query: 268 VDPSTMKVAPQISSSSAGTAVTLFLGFSYDLRPPRAFQ*KQPCGKGA 408 +DP ++++P S+GT VT +GFS D P A + + P KG+ Sbjct: 854 IDPRLLQISP-----SSGTTVTSVVGFSCDGLRPEAIR-QDPTRKGS 894
>LAC1_CRYPA (Q03966) Laccase precursor (EC 1.10.3.2) (Benzenediol:oxygen| oxidoreductase) (Urishiol oxidase) Length = 591 Score = 28.9 bits (63), Expect = 5.8 Identities = 17/41 (41%), Positives = 21/41 (51%) Frame = -2 Query: 428 GSCGKSLAPFPQGCFYWNALGGLKSYENPKNKVTAVPADEE 306 G CGKS P+P ++N S +P NK A PAD E Sbjct: 330 GFCGKSNNPYPAAIIHYNG----ASNSHPTNKGVA-PADHE 365
>PROP_MOUSE (P11680) Properdin precursor (Factor P)| Length = 464 Score = 28.5 bits (62), Expect = 7.6 Identities = 21/68 (30%), Positives = 28/68 (41%) Frame = -1 Query: 240 SLVSVAGQSRQHRSCVGGGGVI*CNKARVLLSLVILWELFGCVSDHLYL*LFKFSQWIQD 61 S+ G +HR CVG GG N A L W+L C + +S+W Sbjct: 86 SVTCSEGSQLRHRRCVGRGGQCSENVAPGTLE----WQLQACEDQPCCPEMGGWSEWGPW 141 Query: 60 RPFSVECN 37 P SV C+ Sbjct: 142 GPCSVTCS 149
>ASNS_ARATH (P49078) Asparagine synthetase [glutamine-hydrolyzing] (EC 6.3.5.4)| (Glutamine-dependent asparagine synthetase) Length = 583 Score = 28.1 bits (61), Expect = 9.9 Identities = 14/33 (42%), Positives = 18/33 (54%) Frame = -2 Query: 401 FPQGCFYWNALGGLKSYENPKNKVTAVPADEEE 303 FP G FY + LGG K + NP +VP+ E Sbjct: 173 FPPGHFYSSKLGGFKQWYNPPWFNESVPSTPYE 205 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,199,039 Number of Sequences: 219361 Number of extensions: 1109647 Number of successful extensions: 3059 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 2953 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3059 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2570413340 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)