>ASSY_SULAC (Q4J8F1) Argininosuccinate synthase (EC 6.3.4.5)|
           (Citrulline--aspartate ligase)
          Length = 391

 Score = 28.9 bits (63), Expect = 3.4
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 72  NSKELGRRGEFTPMVTDLTSYN 137
           N K LGR+G+F+P   ++ SYN
Sbjct: 340 NMKILGRKGKFSPFSEEIASYN 361

>KAT3_ARATH (P92960) Potassium channel KAT3 (AKT4) (AtKC1) (Potassium channel|
           TKC)
          Length = 662

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = +2

Query: 2   TEQSSIIEHQNTTLSHNRNGRLSQQQRVGEERRVYTHG 115
           T QS+  + +  T+S + NG++ +++R G  +RV  HG
Sbjct: 561 TPQSN--DEEIVTVSRHENGQIEERRREGVPKRVIIHG 596

>DNAJ_ACTAC (P77866) Chaperone protein dnaJ|
          Length = 375

 Score = 28.1 bits (61), Expect = 5.7
 Identities = 10/30 (33%), Positives = 13/30 (43%)
 Frame = -2

Query: 140 RIVACQICHHGCKLSSPPQLFAVETACHFC 51
           ++  C  CH   +L      F  E  CHFC
Sbjct: 158 KVETCPHCHGAGRLRRQQGFFVTEQPCHFC 187

>NEK1_HUMAN (Q96PY6) Serine/threonine-protein kinase Nek1 (EC 2.7.11.1)|
            (NimA-related protein kinase 1) (NY-REN-55 antigen)
          Length = 1258

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -1

Query: 165  EENNKK*LEDCSLSDLSPWV*TLLSSPTL 79
            + NN K L  CSL DLS    TL+  PT+
Sbjct: 1041 DANNPKMLRTCSLPDLSKLFRTLMDVPTV 1069

>NEK1_MOUSE (P51954) Serine/threonine-protein kinase Nek1 (EC 2.7.11.1)|
            (NimA-related protein kinase 1)
          Length = 1203

 Score = 27.7 bits (60), Expect = 7.5
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = -1

Query: 165  EENNKK*LEDCSLSDLSPWV*TLLSSPTL 79
            + NN K L  CSL DLS    TL+  PT+
Sbjct: 986  DANNPKMLRTCSLPDLSKLFRTLMDVPTV 1014

>DNAJ_EHRRW (Q5HCG4) Chaperone protein dnaJ|
          Length = 382

 Score = 27.3 bits (59), Expect = 9.8
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -2

Query: 134 VACQICHHGCKLSSPPQLFAVETACHFC 51
           V C  CH    + +    F +E  CH C
Sbjct: 166 VQCNTCHGAGNIRTQQGFFTIERTCHVC 193


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,994,291
Number of Sequences: 219361
Number of extensions: 727982
Number of successful extensions: 2299
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2299
length of database: 80,573,946
effective HSP length: 84
effective length of database: 62,147,622
effective search space used: 1491542928
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)