ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart41g08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chrom... 42 0.47
2gb|AC108046.3| Homo sapiens BAC clone RP11-308K2 from 4, complet... 42 0.47
3gb|AC153488.1| Tribolium castaneum BAC T.cast_C24H10 (Clemson U... 40 1.8
4gb|AC152927.1| Tribolium castaneum BAC T.cast_C19N19 (Clemson U... 40 1.8
5gb|AC102866.5| Mus musculus chromosome 7, clone RP24-576L9, comp... 40 1.8
6gb|AC132833.10| Mus musculus chromosome 15, clone RP24-498G7, co... 40 1.8
7gb|AC163491.2| Mus musculus chromosome 7, clone RP24-176N8, comp... 40 1.8
8gb|AC113031.11| Mus musculus chromosome 14, clone RP23-220B20, c... 40 1.8
9gb|AC142311.1| Pan troglodytes BAC clone RP43-47I3 from 7, compl... 40 1.8
10gb|CP000001.1| Bacillus cereus E33L, complete genome 40 1.8
11gb|AC141922.19| Medicago truncatula clone mth2-9n11, complete se... 40 1.8
12gb|AC144931.29| Medicago truncatula clone mth2-22b18, complete s... 40 1.8
13emb|AL604046.8| Mouse DNA sequence from clone RP23-206D6 on chro... 40 1.8
14gb|AC170800.5| Medicago truncatula clone mth2-32n7, complete seq... 40 1.8
15gb|AC142094.12| Medicago truncatula clone mth2-34h6, complete se... 40 1.8
16emb|BX294123.12| Zebrafish DNA sequence from clone DKEYP-16G7 in... 40 1.8
17gb|AC092506.3| Homo sapiens chromosome 1 clone RP11-364B6, compl... 40 1.8
18dbj|AK033893.1| Mus musculus adult male diencephalon cDNA, RIKEN... 40 1.8
19gb|AC104842.4| Homo sapiens BAC clone RP11-544D5 from 2, complet... 40 1.8
20gb|AC154664.2| Mus musculus BAC clone RP24-284G3 from chromosome... 40 1.8
21emb|AL672248.13| Mouse DNA sequence from clone RP23-82A12 on chr... 40 1.8
22gb|AC171313.5| Mus musculus chromosome 7, clone RP23-294D10, com... 40 1.8
23emb|AL805970.8| Mouse DNA sequence from clone RP23-438O3 on chro... 40 1.8
24gb|AC102519.13| Mus musculus chromosome 18, clone RP24-560I9, co... 38 7.3
25gb|AC105898.2| Drosophila melanogaster clone BACR25P15, complete... 38 7.3
26gb|AC091478.6| Mus musculus chromosome 3, clone RP23-469J3, comp... 38 7.3
27gb|AC140389.3| Mus musculus BAC clone RP24-202H2 from chromosome... 38 7.3
28gb|AY173901.1| Liolaemus sp. MM-5 isolate 2681 12S ribosomal RNA... 38 7.3
29gb|AY367836.1| Liolaemus sp. MM-5 LJAMM2681 12S ribosomal RNA ge... 38 7.3
30gb|AC112686.10| Mus musculus chromosome 6, clone RP23-354N21, co... 38 7.3
31gb|AC121856.3| Mus musculus BAC clone RP24-97G6 from chromosome ... 38 7.3
32gb|AC107661.10| Mus musculus chromosome 10, clone RP23-174M1, co... 38 7.3
33emb|AL512639.8| Human DNA sequence from clone RP11-346G21 on chr... 38 7.3
34gb|AC102274.20| Mus musculus chromosome 3, clone RP24-286L19, co... 38 7.3
35gb|BC100375.1| Mus musculus cDNA clone IMAGE:30935196 38 7.3
36gb|AC157572.4| Mus musculus BAC clone RP23-79O10 from chromosome... 38 7.3
37emb|AL627069.10| Mouse DNA sequence from clone RP23-385C16 on ch... 38 7.3
38emb|CR361569.11| Zebrafish DNA sequence from clone CH211-99I20 i... 38 7.3
39gb|AC161204.7| Mus musculus chromosome 3, clone RP23-479L7, comp... 38 7.3
40gb|AC159323.3| Mus musculus BAC clone RP23-6I8 from chromosome 1... 38 7.3
41gb|AC092857.17| Rattus norvegicus clone rp32-362k5, complete seq... 38 7.3
42dbj|AK136179.1| Mus musculus in vitro fertilized eggs cDNA, RIKE... 38 7.3
43gb|AC093875.1| Homo sapiens BAC clone RP11-625B21 from 4, comple... 38 7.3
44gb|AC105899.1| Drosophila melanogaster, chromosome 2L, region 22... 38 7.3
45gb|AC147892.2| Xenopus tropicalis clone CH216-35D21, complete se... 38 7.3
46dbj|AK046029.1| Mus musculus adult male corpora quadrigemina cDN... 38 7.3
47dbj|AK086268.1| Mus musculus 15 days embryo head cDNA, RIKEN ful... 38 7.3
48gb|AC148683.1| Macaca mulatta Major Histocompatibility Complex B... 38 7.3
49gb|AC008320.4|AC008320 Drosophila melanogaster, chromosome 2L, r... 38 7.3
50dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partia... 38 7.3
51gb|AF217235.1|AF217235 Staphylococcus aureus pathogenicity islan... 38 7.3
52gb|AC148599.2| Xenopus tropicalis clone CH216-2G20, complete seq... 38 7.3
53dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility co... 38 7.3
54gb|AC154140.7| Mus musculus chromosome 1, clone RP23-184B11, com... 38 7.3
55gb|AE003585.5| Drosophila melanogaster chromosome 2L, section 6 ... 38 7.3
56gb|AC004574.1|AC004574 Drosophila melanogaster, chromosome 2L, r... 38 7.3
57emb|AJ938182.1| Staphylococcus aureus RF122 complete genome 38 7.3 
>emb|AL929352.1|PFA929352 Plasmodium falciparum strain 3D7, chromosome 5, segment 2/4
          Length = 313050

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 95    tttgaataagatggaaaataa 115
             |||||||||||||||||||||
Sbjct: 83363 tttgaataagatggaaaataa 83343
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>gb|AC108046.3| Homo sapiens BAC clone RP11-308K2 from 4, complete sequence
          Length = 177483

 Score = 42.1 bits (21), Expect = 0.47
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 83    acattgtgtttctttgaataa 103
             |||||||||||||||||||||
Sbjct: 70765 acattgtgtttctttgaataa 70785
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>gb|AC153488.1| Tribolium castaneum  BAC T.cast_C24H10 (Clemson University Genomics
             Institute Tribolium castaneum BAC Library (Red Flour
             Beetle)) complete sequence
          Length = 40580

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 104   gatggaaaataaacacaaac 123
             ||||||||||||||||||||
Sbjct: 26591 gatggaaaataaacacaaac 26572
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>gb|AC152927.1| Tribolium castaneum  BAC T.cast_C19N19 (Clemson University Genomics
             Institute Tribolium castaneum BAC Library (Red Flour
             Beetle)) complete sequence
          Length = 137018

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 104   gatggaaaataaacacaaac 123
             ||||||||||||||||||||
Sbjct: 27215 gatggaaaataaacacaaac 27234
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>gb|AC102866.5| Mus musculus chromosome 7, clone RP24-576L9, complete sequence
          Length = 157163

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 103    agatggaaaataaacacaaa 122
              ||||||||||||||||||||
Sbjct: 113653 agatggaaaataaacacaaa 113634
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>gb|AC132833.10| Mus musculus chromosome 15, clone RP24-498G7, complete sequence
          Length = 154206

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 97    tgaataagatggaaaataaa 116
             ||||||||||||||||||||
Sbjct: 74719 tgaataagatggaaaataaa 74738
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>gb|AC163491.2| Mus musculus chromosome 7, clone RP24-176N8, complete sequence
          Length = 164417

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 103   agatggaaaataaacacaaa 122
             ||||||||||||||||||||
Sbjct: 84733 agatggaaaataaacacaaa 84714
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>gb|AC113031.11| Mus musculus chromosome 14, clone RP23-220B20, complete sequence
          Length = 250215

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 84    cattgtgtttctttgaataa 103
             ||||||||||||||||||||
Sbjct: 35161 cattgtgtttctttgaataa 35180
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>gb|AC142311.1| Pan troglodytes BAC clone RP43-47I3 from 7, complete sequence
          Length = 166861

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 102   aagatggaaaataaacacaa 121
             ||||||||||||||||||||
Sbjct: 67250 aagatggaaaataaacacaa 67269
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>gb|CP000001.1| Bacillus cereus E33L, complete genome
          Length = 5300915

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 57      atttaagagtacatatatta 76
               ||||||||||||||||||||
Sbjct: 3655308 atttaagagtacatatatta 3655327
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>gb|AC141922.19| Medicago truncatula clone mth2-9n11, complete sequence
          Length = 107448

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    atggaacatacatatacaca 42
             ||||||||||||||||||||
Sbjct: 70107 atggaacatacatatacaca 70088
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>gb|AC144931.29| Medicago truncatula clone mth2-22b18, complete sequence
          Length = 122819

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    atggaacatacatatacaca 42
             ||||||||||||||||||||
Sbjct: 41643 atggaacatacatatacaca 41624
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>emb|AL604046.8| Mouse DNA sequence from clone RP23-206D6 on chromosome 11 Contains
            the genes for olfactory receptor MOR135-14 and -3 , two
            olfactory receptor MOR135 pseudogenes, the gene for a
            novel olfactory receptor family MOR135 member, a zinc
            finger protein pseudogene, the 5' end of the gene for a
            novel KRAB box domain containing protein and a CpG
            island, complete sequence
          Length = 194873

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 91   tttctttgaataagatggaaaata 114
            ||||||||||||| ||||||||||
Sbjct: 9128 tttctttgaataacatggaaaata 9105
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>gb|AC170800.5| Medicago truncatula clone mth2-32n7, complete sequence
          Length = 99712

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 23    atggaacatacatatacaca 42
             ||||||||||||||||||||
Sbjct: 59626 atggaacatacatatacaca 59607
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>gb|AC142094.12| Medicago truncatula clone mth2-34h6, complete sequence
          Length = 151594

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 23     atggaacatacatatacaca 42
              ||||||||||||||||||||
Sbjct: 109952 atggaacatacatatacaca 109971
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>emb|BX294123.12| Zebrafish DNA sequence from clone DKEYP-16G7 in linkage group 2, complete
              sequence
          Length = 168359

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 99     aataagatggaaaataaacacaaa 122
              ||||| ||||||||||||||||||
Sbjct: 149193 aataacatggaaaataaacacaaa 149170
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>gb|AC092506.3| Homo sapiens chromosome 1 clone RP11-364B6, complete sequence
          Length = 198279

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 97     tgaataagatggaaaataaa 116
              ||||||||||||||||||||
Sbjct: 107664 tgaataagatggaaaataaa 107683
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>dbj|AK033893.1| Mus musculus adult male diencephalon cDNA, RIKEN full-length
           enriched library, clone:9330111L21
           product:unclassifiable, full insert sequence
          Length = 1956

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 52  tccaaatttaagagtacata 71
           ||||||||||||||||||||
Sbjct: 791 tccaaatttaagagtacata 772
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>gb|AC104842.4| Homo sapiens BAC clone RP11-544D5 from 2, complete sequence
          Length = 150622

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 99    aataagatggaaaataaacacaaa 122
             ||||| ||||||||||||||||||
Sbjct: 59376 aataaaatggaaaataaacacaaa 59399
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>gb|AC154664.2| Mus musculus BAC clone RP24-284G3 from chromosome 14, complete sequence
          Length = 157658

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 84     cattgtgtttctttgaataa 103
              ||||||||||||||||||||
Sbjct: 120848 cattgtgtttctttgaataa 120867
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>emb|AL672248.13| Mouse DNA sequence from clone RP23-82A12 on chromosome X, complete
              sequence
          Length = 192322

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 52     tccaaatttaagagtacata 71
              ||||||||||||||||||||
Sbjct: 166474 tccaaatttaagagtacata 166493
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>gb|AC171313.5| Mus musculus chromosome 7, clone RP23-294D10, complete sequence
          Length = 208997

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   agatggaaaataaacacaaa 122
             ||||||||||||||||||||
Sbjct: 99036 agatggaaaataaacacaaa 99055
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>emb|AL805970.8| Mouse DNA sequence from clone RP23-438O3 on chromosome 4, complete
              sequence
          Length = 180421

 Score = 40.1 bits (20), Expect = 1.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 19     tgacatggaacatacatata 38
              ||||||||||||||||||||
Sbjct: 108445 tgacatggaacatacatata 108464
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>gb|AC102519.13| Mus musculus chromosome 18, clone RP24-560I9, complete sequence
          Length = 186140

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 91     tttctttgaataagatgga 109
              |||||||||||||||||||
Sbjct: 135197 tttctttgaataagatgga 135215
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>gb|AC105898.2| Drosophila melanogaster clone BACR25P15, complete sequence
          Length = 169913

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 106    tggaaaataaacacaaacg 124
              |||||||||||||||||||
Sbjct: 155028 tggaaaataaacacaaacg 155010
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>gb|AC091478.6| Mus musculus chromosome 3, clone RP23-469J3, complete sequence
          Length = 253738

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 89     tgtttctttgaataagatg 107
              |||||||||||||||||||
Sbjct: 207325 tgtttctttgaataagatg 207307
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>gb|AC140389.3| Mus musculus BAC clone RP24-202H2 from chromosome 18, complete sequence
          Length = 169195

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 60    taagagtacatatattact 78
             |||||||||||||||||||
Sbjct: 94806 taagagtacatatattact 94788
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>gb|AY173901.1| Liolaemus sp. MM-5 isolate 2681 12S ribosomal RNA gene, partial
           sequence; mitochondrial
          Length = 810

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 105 atggaaaataaacacaaac 123
           |||||||||||||||||||
Sbjct: 506 atggaaaataaacacaaac 488
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>gb|AY367836.1| Liolaemus sp. MM-5 LJAMM2681 12S ribosomal RNA gene, partial
           sequence; mitochondrial
          Length = 836

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 105 atggaaaataaacacaaac 123
           |||||||||||||||||||
Sbjct: 305 atggaaaataaacacaaac 323
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>gb|AC112686.10| Mus musculus chromosome 6, clone RP23-354N21, complete sequence
          Length = 222603

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 89     tgtttctttgaataagatg 107
              |||||||||||||||||||
Sbjct: 170477 tgtttctttgaataagatg 170495
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>gb|AC121856.3| Mus musculus BAC clone RP24-97G6 from chromosome 5, complete sequence
          Length = 195640

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 72    tattactacgtacattgtgtttctttg 98
             ||||||||| ||| |||||||||||||
Sbjct: 50731 tattactacttactttgtgtttctttg 50757
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>gb|AC107661.10| Mus musculus chromosome 10, clone RP23-174M1, complete sequence
          Length = 187233

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 24     tggaacatacatatacaca 42
              |||||||||||||||||||
Sbjct: 131122 tggaacatacatatacaca 131104
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>emb|AL512639.8| Human DNA sequence from clone RP11-346G21 on chromosome 9, complete
             sequence
          Length = 164774

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 91    tttctttgaataagatgga 109
             |||||||||||||||||||
Sbjct: 38026 tttctttgaataagatgga 38008
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>gb|AC102274.20| Mus musculus chromosome 3, clone RP24-286L19, complete sequence
          Length = 183113

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 22     catggaacatacatataca 40
              |||||||||||||||||||
Sbjct: 134154 catggaacatacatataca 134136
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>gb|BC100375.1| Mus musculus cDNA clone IMAGE:30935196
          Length = 712

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 89  tgtttctttgaataagatg 107
           |||||||||||||||||||
Sbjct: 245 tgtttctttgaataagatg 263
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>gb|AC157572.4| Mus musculus BAC clone RP23-79O10 from chromosome 14, complete sequence
          Length = 242759

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 68    catatattactacgtacat 86
             |||||||||||||||||||
Sbjct: 56261 catatattactacgtacat 56279
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>emb|AL627069.10| Mouse DNA sequence from clone RP23-385C16 on chromosome 11 Contains the
             Mrps24 gene for mitochondrial ribosomal protein S24, a
             novel gene, a ubiquitin-conjugating enzyme E2D (Ube2d)
             pseudogene, the Dbnl gene for drebrin-like, the Pgam2 gene
             for phosphoglycerate mutase 2, a pseudogene similar to
             part of H+ transporting mitochondrial F0 complex ATP
             synthase subunit F Atp5j, the Polm gene for polymerase
             (DNA directed) mu, the Aebp1 gene for AE binding protein
             1, the Pold2 gene for polymerase (DNA directed) delta 2
             regulatory subunit, novel gene (1600028I17Rik) and seven
             CpG islands, complete sequence
          Length = 195129

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 22    catggaacatacatataca 40
             |||||||||||||||||||
Sbjct: 95313 catggaacatacatataca 95331
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>emb|CR361569.11| Zebrafish DNA sequence from clone CH211-99I20 in linkage group 8,
            complete sequence
          Length = 97203

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 24   tggaacatacatatacaca 42
            |||||||||||||||||||
Sbjct: 1506 tggaacatacatatacaca 1488
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>gb|AC161204.7| Mus musculus chromosome 3, clone RP23-479L7, complete sequence
          Length = 170814

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 22    catggaacatacatataca 40
             |||||||||||||||||||
Sbjct: 93029 catggaacatacatataca 93047
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>gb|AC159323.3| Mus musculus BAC clone RP23-6I8 from chromosome 14, complete sequence
          Length = 223640

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 68    catatattactacgtacat 86
             |||||||||||||||||||
Sbjct: 81646 catatattactacgtacat 81628
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>gb|AC092857.17| Rattus norvegicus clone rp32-362k5, complete sequence
          Length = 143406

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 21    acatggaacatacatatacacag 43
             |||||||||||||||| ||||||
Sbjct: 30471 acatggaacatacatacacacag 30449
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>dbj|AK136179.1| Mus musculus in vitro fertilized eggs cDNA, RIKEN full-length
            enriched library, clone:7420471B14
            product:unclassifiable, full insert sequence
          Length = 2884

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 89   tgtttctttgaataagatg 107
            |||||||||||||||||||
Sbjct: 2310 tgtttctttgaataagatg 2328
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>gb|AC093875.1| Homo sapiens BAC clone RP11-625B21 from 4, complete sequence
          Length = 180418

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 106    tggaaaataaacacaaacg 124
              |||||||||||||||||||
Sbjct: 174911 tggaaaataaacacaaacg 174893
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>gb|AC105899.1| Drosophila melanogaster, chromosome 2L, region 22C-22C, BAC clone
              BACR11F10, complete sequence
          Length = 175115

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 106    tggaaaataaacacaaacg 124
              |||||||||||||||||||
Sbjct: 103130 tggaaaataaacacaaacg 103148
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>gb|AC147892.2| Xenopus tropicalis clone CH216-35D21, complete sequence
          Length = 178580

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 105   atggaaaataaacacaaac 123
             |||||||||||||||||||
Sbjct: 34854 atggaaaataaacacaaac 34872
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>dbj|AK046029.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length
            enriched library, clone:B230334M19
            product:unclassifiable, full insert sequence
          Length = 2475

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 68   catatattactacgtacat 86
            |||||||||||||||||||
Sbjct: 1622 catatattactacgtacat 1640
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>dbj|AK086268.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched
            library, clone:D930017J03 product:unclassifiable, full
            insert sequence
          Length = 3111

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 68   catatattactacgtacat 86
            |||||||||||||||||||
Sbjct: 2257 catatattactacgtacat 2275
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>gb|AC148683.1| Macaca mulatta Major Histocompatibility Complex BAC MMU162B17, complete
             sequence
          Length = 181079

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 102   aagatggaaaataaacaca 120
             |||||||||||||||||||
Sbjct: 31170 aagatggaaaataaacaca 31152
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>gb|AC008320.4|AC008320 Drosophila melanogaster, chromosome 2L, region 22A-22B, BAC clone
             BACR18A24, complete sequence
          Length = 160551

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 106   tggaaaataaacacaaacg 124
             |||||||||||||||||||
Sbjct: 71999 tggaaaataaacacaaacg 71981
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>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds
          Length = 3284914

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 102     aagatggaaaataaacaca 120
               |||||||||||||||||||
Sbjct: 2189767 aagatggaaaataaacaca 2189785
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>gb|AF217235.1|AF217235 Staphylococcus aureus pathogenicity island SaPIbov, complete sequence
          Length = 15891

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 7     aattaatggctttgacatggaac 29
             ||||||||||||| |||||||||
Sbjct: 15343 aattaatggctttaacatggaac 15365
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>gb|AC148599.2| Xenopus tropicalis clone CH216-2G20, complete sequence
          Length = 206059

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 105   atggaaaataaacacaaac 123
             |||||||||||||||||||
Sbjct: 23665 atggaaaataaacacaaac 23647
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>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region
          Length = 1750601

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 102     aagatggaaaataaacaca 120
               |||||||||||||||||||
Sbjct: 1269329 aagatggaaaataaacaca 1269347
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>gb|AC154140.7| Mus musculus chromosome 1, clone RP23-184B11, complete sequence
          Length = 233171

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 87    tgtgtttctttgaataaga 105
             |||||||||||||||||||
Sbjct: 77987 tgtgtttctttgaataaga 78005
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>gb|AE003585.5| Drosophila melanogaster chromosome 2L, section 6 of 83 of the complete
              sequence
          Length = 343161

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 106    tggaaaataaacacaaacg 124
              |||||||||||||||||||
Sbjct: 338111 tggaaaataaacacaaacg 338093
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>gb|AC004574.1|AC004574 Drosophila melanogaster, chromosome 2L, region 22B1-22B2, P1 clone
             DS05717, complete sequence
          Length = 82912

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 106   tggaaaataaacacaaacg 124
             |||||||||||||||||||
Sbjct: 81605 tggaaaataaacacaaacg 81587
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>emb|AJ938182.1| Staphylococcus aureus RF122 complete genome
          Length = 2742531

 Score = 38.2 bits (19), Expect = 7.3
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 7      aattaatggctttgacatggaac 29
              ||||||||||||| |||||||||
Sbjct: 389354 aattaatggctttaacatggaac 389332


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,210,796
Number of Sequences: 3902068
Number of extensions: 2210796
Number of successful extensions: 185244
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 184945
Number of HSP's gapped (non-prelim): 299
length of query: 151
length of database: 17,233,045,268
effective HSP length: 21
effective length of query: 130
effective length of database: 17,151,101,840
effective search space: 2229643239200
effective search space used: 2229643239200
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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