ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart41g07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1KADC_SOLTU (Q8HSW1) Adenylate kinase, chloroplast precursor (EC ... 72 8e-13
2KADC1_ARATH (Q9ZUU1) Probable adenylate kinase 1, chloroplast pr... 69 9e-12
3KAD_STRAW (Q82DM5) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transp... 33 0.55

>KADC_SOLTU (Q8HSW1) Adenylate kinase, chloroplast precursor (EC 2.7.4.3)|
           (ATP-AMP transphosphorylase)
          Length = 288

 Score = 72.0 bits (175), Expect = 8e-13
 Identities = 31/52 (59%), Positives = 41/52 (78%)
 Frame = -3

Query: 496 VYHDLCEPVEDFYRARGKLLEFNLPGGIPGSWPKLLQALNIEDPDNNRSATA 341
           +Y D  +PVEDFYR++GKLLEF+LPGGIP SWPKLL+ LN+++ +   S  A
Sbjct: 237 IYWDKSQPVEDFYRSQGKLLEFDLPGGIPESWPKLLEVLNLDEQEYKLSPAA 288



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>KADC1_ARATH (Q9ZUU1) Probable adenylate kinase 1, chloroplast precursor (EC|
           2.7.4.3) (ATP-AMP transphosphorylase)
          Length = 284

 Score = 68.6 bits (166), Expect = 9e-12
 Identities = 26/52 (50%), Positives = 42/52 (80%)
 Frame = -3

Query: 496 VYHDLCEPVEDFYRARGKLLEFNLPGGIPGSWPKLLQALNIEDPDNNRSATA 341
           +Y++  +P+E++YR +GKL+EF+LPGGIP SWP+LL+AL ++D +  +S  A
Sbjct: 233 IYNETSQPLEEYYRTKGKLMEFDLPGGIPESWPRLLEALRLDDYEEKQSVAA 284



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>KAD_STRAW (Q82DM5) Adenylate kinase (EC 2.7.4.3) (ATP-AMP transphosphorylase)|
          Length = 220

 Score = 32.7 bits (73), Expect = 0.55
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = -3

Query: 496 VYHDLCEPVEDFYRARGKLLEFNLPGGIPGSWPKLLQALNIED 368
           VYH   EP+ D+YRA+G ++  +  G +     + + AL  ED
Sbjct: 175 VYHTQTEPIIDYYRAQGLVVTISALGPVEEVTQRAMDALKRED 217


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,055,034
Number of Sequences: 219361
Number of extensions: 1417752
Number of successful extensions: 3277
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3213
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3273
length of database: 80,573,946
effective HSP length: 104
effective length of database: 57,760,402
effective search space used: 3523384522
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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