ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart41g05 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009005.1| Triticum aestivum clone wdk2c.pk018.g2:fis, full insert mRNA sequence Length = 1782 Score = 202 bits (102), Expect = 7e-49 Identities = 173/197 (87%), Gaps = 6/197 (3%) Strand = Plus / Minus Query: 280 caccatggcgacgaggctcctccatccggcgccgacggctgcggccgcaccggcgggcgg 339 ||||| |||||||||||||||||| |||||||||||||||||||| || ||||||||||| Sbjct: 818 caccacggcgacgaggctcctccagccggcgccgacggctgcggcggctccggcgggcgg 759 Query: 340 ggttgtctcgtcgtcctcgtcctcgtccgaccccgagggcgccttggctgcccccttggc 399 || ||| ||||||||||| ||| |||||||| |||||||||||||||||||| Sbjct: 758 ggcctcctcctcgtcctcgtcgtcg------cccgagggggccttggctgcccccttggc 705 Query: 400 ggaggagggcttctttcccggggccagcggcgcggacgccggcggcttggggccgaagag 459 || ||||||||||| || |||||| | |||||||| ||||||||||||||||||||||| Sbjct: 704 cgacgagggcttcttgccgggggccgggggcgcggaggccggcggcttggggccgaagag 645 Query: 460 gtccatgggcagcagca 476 ||||||||||||||||| Sbjct: 644 gtccatgggcagcagca 628 Score = 87.7 bits (44), Expect = 3e-14 Identities = 63/69 (91%), Gaps = 4/69 (5%) Strand = Plus / Minus Query: 138 tagtaacctatccaaatccatgcacagcatgcacgcacgcagctagtctccatcgatccg 197 |||||||||||||||||||||||||| ||| |||||||||||||||||||||||| | Sbjct: 949 tagtaacctatccaaatccatgcacaacat----gcacgcagctagtctccatcgatctg 894 Query: 198 tcggtctca 206 ||||||||| Sbjct: 893 tcggtctca 885 Score = 83.8 bits (42), Expect = 5e-13 Identities = 70/77 (90%), Gaps = 3/77 (3%) Strand = Plus / Minus Query: 25 atcttatcacatcttaagcccatcttaacagggggagaaaagaaagagaacaaaaatgga 84 |||||||| ||||||| ||||||| |||||||| |||||||||||||||||||||||| Sbjct: 1053 atcttatcgcatctta-gcccatc--aacaggggaggaaaagaaagagaacaaaaatgga 997 Query: 85 catttaacaacaaaaga 101 |||||||||| |||||| Sbjct: 996 catttaacaaaaaaaga 980 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 237 tttcttcttcttacaagaggcac 259 ||||||||||||||||||||||| Sbjct: 861 tttcttcttcttacaagaggcac 839
>ref|XM_480123.1| Oryza sativa (japonica cultivar-group), mRNA Length = 678 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtccgac 370 ||||||||||||||||||||||||| Sbjct: 426 ctcgtcgtcctcgtcctcgtccgac 402
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgtccgac 370 ||||||||||||||||||||||||| Sbjct: 2962270 ctcgtcgtcctcgtcctcgtccgac 2962294 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 23863033 tcgtcgtcctcgtcctcgtcc 23863053 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 gtcgtcctcgtcctcgtccg 368 |||||||||||||||||||| Sbjct: 1143706 gtcgtcctcgtcctcgtccg 1143725
>dbj|AP004461.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0443G08 Length = 162139 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgtccgac 370 ||||||||||||||||||||||||| Sbjct: 135332 ctcgtcgtcctcgtcctcgtccgac 135356
>dbj|AP005467.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1349_D05 Length = 174478 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgtccgac 370 ||||||||||||||||||||||||| Sbjct: 12993 ctcgtcgtcctcgtcctcgtccgac 13017
>gb|AC126683.4| Mus musculus BAC clone RP23-62G15 from 6, complete sequence Length = 167297 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 62 aaaagaaagagaacaaaaatggac 85 |||||||||||||||||||||||| Sbjct: 32531 aaaagaaagagaacaaaaatggac 32554
>gb|AC142274.3| Mus musculus BAC clone RP23-251M14 from 6, complete sequence Length = 179732 Score = 48.1 bits (24), Expect = 0.026 Identities = 24/24 (100%) Strand = Plus / Plus Query: 62 aaaagaaagagaacaaaaatggac 85 |||||||||||||||||||||||| Sbjct: 179339 aaaagaaagagaacaaaaatggac 179362
>gb|AC124143.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0053D02, complete sequence Length = 157106 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 426 gcggcgcggacgccggcggcttggggccgaa 456 |||||| ||||| |||||||||||||||||| Sbjct: 58076 gcggcggggacggcggcggcttggggccgaa 58046
>gb|AF470060.1| Sorghum bicolor P-type R2R3 Myb protein (Myb23) gene, partial cds Length = 2028 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 345 tctcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||||| Sbjct: 929 tctcgtcgtcctcgtcctcgtcc 907
>emb|Y14276.1|SCSIG1 Sorghum bicolor mRNA for plastid RNA polymerase sigma factor Length = 1886 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Minus Query: 345 tctcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||||| Sbjct: 645 tctcgtcgtcctcgtcctcgtcc 623
>gb|U12965.1| Caenorhabditis elegans cosmid F23F12, complete sequence Length = 34609 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 98 aagaagaagatcagaagaagaag 120 ||||||||||||||||||||||| Sbjct: 10898 aagaagaagatcagaagaagaag 10920
>ref|NM_066026.2| Caenorhabditis elegans F23F12.8 (F23F12.8) mRNA, complete cds Length = 2943 Score = 46.1 bits (23), Expect = 0.10 Identities = 23/23 (100%) Strand = Plus / Plus Query: 98 aagaagaagatcagaagaagaag 120 ||||||||||||||||||||||| Sbjct: 1472 aagaagaagatcagaagaagaag 1494
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.10 Identities = 29/31 (93%) Strand = Plus / Minus Query: 426 gcggcgcggacgccggcggcttggggccgaa 456 |||||| ||||| |||||||||||||||||| Sbjct: 27827659 gcggcggggacggcggcggcttggggccgaa 27827629
>gb|BT018218.1| Zea mays clone EL01N0561B10.c mRNA sequence Length = 670 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 337 ctcgtcgtcctcgtcctcgtcc 358
>ref|XM_362225.1| Magnaporthe grisea 70-15 predicted protein (MG04670.4) partial cds Length = 681 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 267 ctcgtcgtcctcgtcctcgtcc 246
>gb|AC006357.5| Homo sapiens PAC clone RP5-1121A15 from 7, complete sequence Length = 130492 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 21346 ctcgtcgtcctcgtcctcgtcc 21325
>ref|XM_861216.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 8 (LOC484478), mRNA Length = 1817 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 1616 ctcgtcgtcctcgtcctcgtcc 1637
>ref|XM_861199.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 7 (LOC484478), mRNA Length = 1736 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 1499 ctcgtcgtcctcgtcctcgtcc 1520
>ref|XM_861184.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 6 (LOC484478), mRNA Length = 1695 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 1583 ctcgtcgtcctcgtcctcgtcc 1604
>ref|XM_861169.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 5 (LOC484478), mRNA Length = 1752 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 1640 ctcgtcgtcctcgtcctcgtcc 1661
>ref|XM_861153.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 4 (LOC484478), mRNA Length = 1719 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 1607 ctcgtcgtcctcgtcctcgtcc 1628
>ref|XM_861140.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 3 (LOC484478), mRNA Length = 1713 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 1601 ctcgtcgtcctcgtcctcgtcc 1622
>ref|XM_847636.1| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 2 (LOC484478), mRNA Length = 1932 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 1664 ctcgtcgtcctcgtcctcgtcc 1685
>ref|XM_541592.2| PREDICTED: Canis familiaris similar to POU domain, class 2, transcription factor 2, transcript variant 1 (LOC484478), mRNA Length = 2285 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 2154 ctcgtcgtcctcgtcctcgtcc 2175
>emb|AL606463.6| Human DNA sequence from clone RP11-485D21 on chromosome 1 Contains the 5' end of a novel gene, complete sequence Length = 159304 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 108 tcagaagaagaagcagccagca 129 |||||||||||||||||||||| Sbjct: 58086 tcagaagaagaagcagccagca 58107
>ref|XM_781336.1| PREDICTED: Strongylocentrotus purpuratus similar to CG6772-PA, isoform A (LOC581330), mRNA Length = 1821 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 101 aagaagatcagaagaagaagca 122 |||||||||||||||||||||| Sbjct: 149 aagaagatcagaagaagaagca 128
>emb|X56537.1|HSF9HMEO Human novel homeobox mRNA for a DNA binding protein Length = 1254 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 605 ctcgtcgtcctcgtcctcgtcc 584
>gb|U07664.1|HSHB9HB2 Homo sapiens HB9 homeobox gene, exons 2 and 3 and complete cds Length = 3484 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 2205 ctcgtcgtcctcgtcctcgtcc 2184
>emb|CR623223.1| full-length cDNA clone CL0BB009ZA03 of Neuroblastoma of Homo sapiens (human) Length = 2029 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 1269 ctcgtcgtcctcgtcctcgtcc 1248
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 314 acggctgcggccgcaccggcgg 335 |||||||||||||||||||||| Sbjct: 1323213 acggctgcggccgcaccggcgg 1323192
>ref|NM_005515.3| Homo sapiens homeobox HB9 (HLXB9), mRNA Length = 2176 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 1398 ctcgtcgtcctcgtcctcgtcc 1377
>dbj|AK169543.1| Mus musculus 3 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A630089N23 product:sperm specific antigen 2, full insert sequence Length = 5270 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 278 ctcgtcgtcctcgtcctcgtcc 257
>gb|AE016820.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome VII, complete sequence Length = 1476513 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 605904 ctcgtcgtcctcgtcctcgtcc 605883 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 123199 ctcgtcgtcctcgtcctcgtc 123179
>gb|AF107457.1|AF107457 Homo sapiens clone HB9 mRNA sequence Length = 2061 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 1282 ctcgtcgtcctcgtcctcgtcc 1261
>gb|AC147215.4| Pan troglodytes BAC clone RP43-141N5 from chromosome 7, complete sequence Length = 179309 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 35994 ctcgtcgtcctcgtcctcgtcc 36015
>ref|XM_230036.3| PREDICTED: Rattus norvegicus sperm specific antigen 2 (predicted) (Ssfa2_predicted), mRNA Length = 4848 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 1068 ctcgtcgtcctcgtcctcgtcc 1047
>dbj|AB120565.1| Mus musculus mRNA for KRAP, complete cds Length = 3759 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 162 ctcgtcgtcctcgtcctcgtcc 141
>ref|NM_211672.1| Eremothecium gossypii AGL056Wp (AGL056W), mRNA Length = 1191 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 681 ctcgtcgtcctcgtcctcgtcc 660
>gb|AF107453.1|HSHB9G2 Homo sapiens homeotic protein HB9 gene, exons 2 and 3 and partial cds Length = 1979 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 1089 ctcgtcgtcctcgtcctcgtcc 1068
>dbj|AB093303.1| Mus musculus mRNA for mKIAA1927 protein Length = 4966 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 152 ctcgtcgtcctcgtcctcgtcc 131
>ref|NM_080558.3| Mus musculus sperm specific antigen 2 (Ssfa2), mRNA Length = 3759 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 162 ctcgtcgtcctcgtcctcgtcc 141
>emb|AL928770.1| Mouse DNA sequence from clone RP23-20E18 on chromosome 2, complete sequence Length = 87095 Score = 44.1 bits (22), Expect = 0.41 Identities = 22/22 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||||| Sbjct: 84220 ctcgtcgtcctcgtcctcgtcc 84199
>ref|NM_030771.1| Homo sapiens coiled-coil domain containing 34 (CCDC34), transcript variant 1, mRNA Length = 1488 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 agaaaagaaagagaacaaaaa 80 ||||||||||||||||||||| Sbjct: 664 agaaaagaaagagaacaaaaa 684
>ref|XM_525340.1| PREDICTED: Pan troglodytes LOC469956 (LOC469956), mRNA Length = 1677 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 789 ctcgtcgtcctcgtcctcgtc 769
>ref|XM_483012.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1120 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 708 tcgtcgtcctcgtcctcgtcc 688
>ref|NM_152897.1| Homo sapiens chromosome 20 open reading frame 161 (C20orf161), transcript variant 2, mRNA Length = 1921 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 323 ctcgtcgtcctcgtcctcgtc 303
>ref|NM_033421.2| Homo sapiens chromosome 20 open reading frame 161 (C20orf161), transcript variant 1, mRNA Length = 3173 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 323 ctcgtcgtcctcgtcctcgtc 303
>gb|AC117994.12| Mus musculus chromosome 6, clone RP23-25K2, complete sequence Length = 237945 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 96 aaaagaagaagatcagaagaagaagcagc 124 |||||||||||| ||||||||||||||| Sbjct: 142010 aaaagaagaagaaaagaagaagaagcagc 142038
>gb|AC016158.4| Drosophila melanogaster clone BACR38H07, complete sequence Length = 172841 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 aagaaagagaacaaaaatgga 84 ||||||||||||||||||||| Sbjct: 35040 aagaaagagaacaaaaatgga 35060
>ref|XM_430347.1| PREDICTED: Gallus gallus hypothetical gene supported by BX931485 (LOC425988), partial mRNA Length = 539 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 473 tcgtcgtcctcgtcctcgtcc 453
>ref|XM_365395.1| Magnaporthe grisea 70-15 hypothetical protein (MG02097.4) partial mRNA Length = 2472 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 2240 tcgtcgtcctcgtcctcgtcc 2220
>ref|XM_954367.1| Neurospora crassa OR74A hypothetical protein (NCU05902.1) partial mRNA Length = 4080 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 269 tcgtcgtcctcgtcctcgtcc 249
>ref|XM_325756.1| Neurospora crassa OR74A hypothetical protein (NCU05902.1) partial mRNA Length = 4080 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 269 tcgtcgtcctcgtcctcgtcc 249
>gb|AC104847.2| Oryza sativa (japonica cultivar-group) chromosome 11 PAC clone P0480H08, complete sequence Length = 156301 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 63064 ctcgtcgtcctcgtcctcgtc 63084
>gb|AY665713.1| Equine herpesvirus 1 strain Ab4, complete genome Length = 150224 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 145124 tcgtcgtcctcgtcctcgtcc 145144 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 118036 tcgtcgtcctcgtcctcgtcc 118016
>gb|AC152940.2| Mus musculus BAC clone RP23-264B6 from chromosome 15, complete sequence Length = 224704 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 agggggagaaaagaaagagaa 74 ||||||||||||||||||||| Sbjct: 4489 agggggagaaaagaaagagaa 4509
>gb|AY268055.1| Lontra canadensis clone otter b8 microsatellite RIO 05 sequence Length = 428 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 355 tcgtcgtcctcgtcctcgtcc 335
>ref|XM_542545.2| PREDICTED: Canis familiaris similar to potassium voltage-gated channel, shaker-related subfamily, member 4 (LOC485427), mRNA Length = 2001 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 432 ctcgtcgtcctcgtcctcgtc 412
>ref|XM_534097.2| PREDICTED: Canis familiaris hypothetical LOC476895 (LOC476895), mRNA Length = 1385 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 agaaaagaaagagaacaaaaa 80 ||||||||||||||||||||| Sbjct: 555 agaaaagaaagagaacaaaaa 575
>ref|XM_757366.1| Ustilago maydis 521 hypothetical protein (UM06312.1) partial mRNA Length = 3435 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 1583 tcgtcgtcctcgtcctcgtcc 1563
>gb|AC126028.4| Mus musculus BAC clone RP24-542M6 from chromosome 15, complete sequence Length = 168344 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 54 agggggagaaaagaaagagaa 74 ||||||||||||||||||||| Sbjct: 103009 agggggagaaaagaaagagaa 102989
>gb|BC012904.1| Homo sapiens chromosome 20 open reading frame 161, mRNA (cDNA clone IMAGE:3864564), containing frame-shift errors Length = 1868 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 323 ctcgtcgtcctcgtcctcgtc 303
>gb|AC121959.3| Mus musculus BAC clone RP24-247N18 from chromosome 3, complete sequence Length = 187416 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 agaaaagaaagagaacaaaaa 80 ||||||||||||||||||||| Sbjct: 168136 agaaaagaaagagaacaaaaa 168116
>gb|AC158150.9| Mus musculus chromosome 5, clone RP23-173B13, complete sequence Length = 227131 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 aacaaaaatggacatttaaca 93 ||||||||||||||||||||| Sbjct: 151030 aacaaaaatggacatttaaca 151050
>gb|AC090597.9| Homo sapiens chromosome 11, clone RP11-541L7, complete sequence Length = 160210 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 60 agaaaagaaagagaacaaaaa 80 ||||||||||||||||||||| Sbjct: 95861 agaaaagaaagagaacaaaaa 95841
>emb|AL034372.33|HS273P12 Human DNA sequence from clone RP1-273P12 on chromosome 6p22.3-23 Contains an esterase D/formylglutathione hydrolase (ESD) pseudogene, the 5' part of the CAP2 gene encoding adenylyl cyclase-associated protein 2 and a 60S ribosomal protein L7 (RPL7) pseudogene, complete sequence Length = 166234 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 62 aaaagaaagagaacaaaaatg 82 ||||||||||||||||||||| Sbjct: 162477 aaaagaaagagaacaaaaatg 162457
>emb|AL008726.3|HS337O18 Human DNA sequence from clone RP3-337O18 on chromosome 20q12-13.1 Contains the PLPT gene for phospholipid transfer protein, the PPGB gene for protective protein for beta-galactosidase (galactosialidosis), the PTE1 gene for peroxisomal acyl-CoA thioesterase, the C20orf161 gene, the C20orf162 gene, the C20orf163, the C20orf164 gene, the C20orf165 gene, the 5' end of an variant of the TNNC2 gene for fast troponin C2 and three CpG islands, complete sequence Length = 86080 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 6809 ctcgtcgtcctcgtcctcgtc 6789
>gb|AY464052.1| Equine herpesvirus 1 strain V592, complete genome Length = 149430 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 144574 tcgtcgtcctcgtcctcgtcc 144594 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 117743 tcgtcgtcctcgtcctcgtcc 117723
>ref|XM_781851.1| PREDICTED: Strongylocentrotus purpuratus similar to CG31439-PA (LOC581873), mRNA Length = 11769 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 11090 tcgtcgtcctcgtcctcgtcc 11110
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 251254 tcgtcgtcctcgtcctcgtcc 251274
>gb|DQ351275.1| Streptomyces sp. NRRL 30748 meridamycin biosynthetic gene cluster and flanking regions Length = 116831 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgtccgaccccg 374 |||||| |||||||||||||||| ||||| Sbjct: 3907 ctcgtcctcctcgtcctcgtccgcccccg 3935
>gb|AC182253.3| Mus musculus BAC clone RP24-320A8 from chromosome y, complete sequence Length = 181955 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 gaaagagaacaaaaatggaca 86 ||||||||||||||||||||| Sbjct: 179250 gaaagagaacaaaaatggaca 179230 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 66 gaaagagaacaaaaatggaca 86 ||||||||||||||||||||| Sbjct: 131403 gaaagagaacaaaaatggaca 131383
>dbj|AK095851.1| Homo sapiens cDNA FLJ38532 fis, clone HCHON2001099 Length = 3044 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 204 ctcgtcgtcctcgtcctcgtc 184
>emb|CR617424.1| full-length cDNA clone CS0DI036YC23 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1501 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 207 ctcgtcgtcctcgtcctcgtc 187
>emb|CR601928.1| full-length cDNA clone CS0DB001YB03 of Neuroblastoma Cot 10-normalized of Homo sapiens (human) Length = 1550 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 271 ctcgtcgtcctcgtcctcgtc 251
>emb|CR597641.1| full-length cDNA clone CL0BB027ZF04 of Neuroblastoma of Homo sapiens (human) Length = 1349 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 agaaaagaaagagaacaaaaa 80 ||||||||||||||||||||| Sbjct: 545 agaaaagaaagagaacaaaaa 565
>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome Length = 230138 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 130345 tcgtcgtcctcgtcctcgtcc 130325
>gb|AC109998.2| Homo sapiens chromosome 5 clone CTD-2203A3, complete sequence Length = 126394 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 88 ttaacaacaaaagaagaagat 108 ||||||||||||||||||||| Sbjct: 87450 ttaacaacaaaagaagaagat 87430
>dbj|AK149154.1| Mus musculus 2 days neonate sympathetic ganglion cDNA, RIKEN full-length enriched library, clone:7120489L05 product:unclassifiable, full insert sequence Length = 2913 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 agggggagaaaagaaagagaa 74 ||||||||||||||||||||| Sbjct: 2698 agggggagaaaagaaagagaa 2718
>gb|AC175201.2| Sporobolomyces roseus clone JGIBAIF-33D23, complete sequence Length = 42507 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 14032 ctcgtcgtcctcgtcctcgtc 14012
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 2561598 tcgtcgtcctcgtcctcgtcc 2561578
>gb|AF395845.1|AF395845 Homo sapiens SNX21 (SNX21) mRNA, complete cds Length = 1122 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 234 ctcgtcgtcctcgtcctcgtc 214
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 3430639 ctcgtcgtcctcgtcctcgtc 3430619
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 24194363 ctcgtcgtcctcgtcctcgtc 24194383 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 gaaaagaaagagaacaaaaat 81 ||||||||||||||||||||| Sbjct: 11139849 gaaaagaaagagaacaaaaat 11139829
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 21305592 ctcgtcgtcctcgtcctcgtc 21305612
>gb|AC008364.5|AC008364 Drosophila melanogaster, chromosome 3R, region 92D-92D, BAC clone BACR09G02, complete sequence Length = 166642 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 aagaaagagaacaaaaatgga 84 ||||||||||||||||||||| Sbjct: 162817 aagaaagagaacaaaaatgga 162837
>ref|NM_001011629.1| Apis mellifera putative transcription factor mblk-1 (Mblk-1), mRNA Length = 14440 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 88 tcgtcgtcctcgtcctcgtcc 68
>dbj|AB182650.1| Equid herpesvirus 1 ICP4 gene for IE, complete cds Length = 5434 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 4879 tcgtcgtcctcgtcctcgtcc 4859
>gb|AF090447.2| Zea mays 22 kDa alpha zein gene cluster, complete sequence Length = 346296 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 36155 tcgtcgtcctcgtcctcgtcc 36175
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 5072576 ctcgtcgtcctcgtcctcgtc 5072556 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 cgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||| Sbjct: 4160841 cgtcgtcctcgtcctcgtcc 4160860
>ref|XM_223647.3| PREDICTED: Rattus norvegicus sprouty-related, EVH1 domain containing 2 (predicted) (Spred2_predicted), mRNA Length = 2965 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 56 ggggagaaaagaaagagaacaaaaa 80 ||||||||||||||||||| ||||| Sbjct: 2187 ggggagaaaagaaagagaaaaaaaa 2163
>gb|AF382034.1| Homo sapiens hypothetical protein RAMA3 mRNA, complete cds Length = 1375 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 agaaaagaaagagaacaaaaa 80 ||||||||||||||||||||| Sbjct: 552 agaaaagaaagagaacaaaaa 572
>gb|AF523834.1| Homo sapiens sorting nexin protein family member 21 mRNA, complete cds Length = 1600 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 302 ctcgtcgtcctcgtcctcgtc 282
>dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1111_H02 Length = 108603 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 54737 tcgtcgtcctcgtcctcgtcc 54757
>dbj|AB158520.1| Equine herpesvirus 1 ORF64 gene for transcriptional activator, complete cds Length = 4461 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 556 tcgtcgtcctcgtcctcgtcc 576
>emb|BX119978.6| Mouse DNA sequence from clone RP23-354H3 on chromosome X, complete sequence Length = 72115 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 98 aagaagaagatcagaagaagaagcagcca 126 |||||||||| ||||||||||||||||| Sbjct: 21652 aagaagaagaaaagaagaagaagcagcca 21624
>dbj|AK099821.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013101A13, full insert sequence Length = 1120 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 708 tcgtcgtcctcgtcctcgtcc 688
>ref|NM_211422.1| Eremothecium gossypii AGL307Wp (AGL307W), mRNA Length = 972 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 264 ctcgtcgtcctcgtcctcgtc 244
>emb|AL591562.1|HS337O184 Novel human gene mapping to chomosome 20 Length = 1600 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 302 ctcgtcgtcctcgtcctcgtc 282
>emb|AL646053.1| Ralstonia solanacearum GMI1000 megaplasmid complete sequence Length = 2094509 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Minus Query: 396 tggcggaggagggcttctttcccgg 420 ||||||||| ||||||||||||||| Sbjct: 226182 tggcggaggcgggcttctttcccgg 226158
>gb|AE003730.3| Drosophila melanogaster chromosome 3R, section 68 of 118 of the complete sequence Length = 221402 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 64 aagaaagagaacaaaaatgga 84 ||||||||||||||||||||| Sbjct: 367 aagaaagagaacaaaaatgga 387
>gb|AC113061.9| Mus musculus chromosome 14, clone RP23-255H22, complete sequence Length = 190623 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 64 aagaaagagaacaaaaatgga 84 ||||||||||||||||||||| Sbjct: 147994 aagaaagagaacaaaaatgga 147974
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 21615791 ctcgtcgtcctcgtcctcgtc 21615811
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 24122569 ctcgtcgtcctcgtcctcgtc 24122589 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 gaaaagaaagagaacaaaaat 81 ||||||||||||||||||||| Sbjct: 11139548 gaaaagaaagagaacaaaaat 11139528
>gb|AC164560.3| Mus musculus BAC clone RP23-192D6 from chromosome 3, complete sequence Length = 200505 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 agaaaagaaagagaacaaaaa 80 ||||||||||||||||||||| Sbjct: 156331 agaaaagaaagagaacaaaaa 156351
>emb|AL831796.5|CNS08CA9 Oryza sativa chromosome 12, . BAC OSJNBa0012G19 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 157771 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 gaaaagaaagagaacaaaaat 81 ||||||||||||||||||||| Sbjct: 46326 gaaaagaaagagaacaaaaat 46346
>emb|AL772426.5|CNS08CA4 Oryza sativa chromosome 12, . BAC OJ1310_C03 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 132733 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 79054 ctcgtcgtcctcgtcctcgtc 79074
>gb|BC019823.1| Homo sapiens chromosome 20 open reading frame 161, mRNA (cDNA clone MGC:29895 IMAGE:4453502), complete cds Length = 1560 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtc 366 ||||||||||||||||||||| Sbjct: 296 ctcgtcgtcctcgtcctcgtc 276
>gb|BC029421.1| Homo sapiens coiled-coil domain containing 34, mRNA (cDNA clone IMAGE:4806810), containing frame-shift errors Length = 1163 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 60 agaaaagaaagagaacaaaaa 80 ||||||||||||||||||||| Sbjct: 339 agaaaagaaagagaacaaaaa 359
>gb|AY740083.1| Ostreococcus tauri ZTL/AFR-like protein gene, complete cds Length = 1452 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 421 tcgtcgtcctcgtcctcgtcc 401
>gb|AC144632.4| Mus musculus BAC clone RP23-106G16 from chromosome 15, complete sequence Length = 206265 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 54 agggggagaaaagaaagagaa 74 ||||||||||||||||||||| Sbjct: 200302 agggggagaaaagaaagagaa 200322
>emb|AL831786.7| Mouse DNA sequence from clone RP23-177C18 on chromosome 4, complete sequence Length = 80871 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 56 ggggagaaaagaaagagaacaaaaa 80 ||||| ||||||||||||||||||| Sbjct: 41882 ggggaaaaaagaaagagaacaaaaa 41906
>gb|J04366.1|HSEIEP Equine herpesvirus type 1 immediate-early protein gene, complete cds Length = 8174 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 1543 tcgtcgtcctcgtcctcgtcc 1563
>dbj|AB047034.1| Apis mellifera mblk-1 mRNA, complete cds Length = 14440 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||||||| Sbjct: 88 tcgtcgtcctcgtcctcgtcc 68
>gb|AC154050.1| Drosophila melanogaster clone BACR22M24, complete sequence Length = 161653 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 132085 tcgtcgtcctcgtcctcgtc 132104
>gb|BT023919.1| Drosophila melanogaster RH42017 full insert cDNA Length = 5245 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 gatcagaagaagaagcagcc 125 |||||||||||||||||||| Sbjct: 501 gatcagaagaagaagcagcc 520
>ref|XM_629787.1| Dictyostelium discoideum hypothetical protein (DDB0184184), partial mRNA Length = 774 Score = 40.1 bits (20), Expect = 6.4 Identities = 27/28 (96%), Gaps = 1/28 (3%) Strand = Plus / Plus Query: 75 caaaaatgga-catttaacaacaaaaga 101 |||||||||| ||||||||||||||||| Sbjct: 47 caaaaatggatcatttaacaacaaaaga 74
>ref|XM_479831.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1613 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 gtcgtcctcgtcctcgtccg 368 |||||||||||||||||||| Sbjct: 1109 gtcgtcctcgtcctcgtccg 1128
>ref|XM_468447.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1719 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||| Sbjct: 232 cgtcgtcctcgtcctcgtcc 213
>ref|XM_478901.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2059 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 234 tcgtcgtcctcgtcctcgtc 215
>gb|BT017762.1| Zea mays clone EL01N0501F08.c mRNA sequence Length = 1235 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 260 tcgtcgtcctcgtcctcgtc 241
>gb|AY758272.1| Gallus gallus microsatellite NLRIC0003 sequence Length = 371 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 135 tcgtcgtcctcgtcctcgtc 154
>gb|AC108777.7| Mus musculus chromosome 18, clone RP23-368H22, complete sequence Length = 216024 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 98 aagaagaagatcagaagaagaagcagccagc 128 |||||||||| ||||||||||||||||||| Sbjct: 38778 aagaagaaga--agaagaagaagcagccagc 38806
>gb|AC157598.4| Mus musculus BAC clone RP23-193D3 from chromosome 17, complete sequence Length = 222399 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 gggagaaaagaaagagaacaaaaa 80 |||||||||||||||||| ||||| Sbjct: 1490 gggagaaaagaaagagaagaaaaa 1467
>gb|U51997.1| Caenorhabditis elegans cosmid F19G12, complete sequence Length = 28537 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 gcttgaattttcttcttctt 248 |||||||||||||||||||| Sbjct: 27527 gcttgaattttcttcttctt 27546
>gb|AC130697.10| Mus musculus chromosome 15, clone RP24-121O7, complete sequence Length = 152112 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 gggagaaaagaaagagaacaaaaa 80 |||||||||||||||||| ||||| Sbjct: 94505 gggagaaaagaaagagaaaaaaaa 94528
>gb|AC168275.4| Mus musculus 10 BAC RP23-350O21 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 188458 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 agccagcaagaagtagtagt 141 |||||||||||||||||||| Sbjct: 83749 agccagcaagaagtagtagt 83768
>gb|AC150644.4| Bos taurus BAC CH240-223I2 (Children's Hospital Oakland Research Institute Bovine BAC Library (male)) complete sequence Length = 199501 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 60 agaaaagaaagagaacaaaa 79 |||||||||||||||||||| Sbjct: 4559 agaaaagaaagagaacaaaa 4540
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 429 gcgcggacgccggcggcttg 448 |||||||||||||||||||| Sbjct: 1874787 gcgcggacgccggcggcttg 1874768
>ref|XM_424102.1| PREDICTED: Gallus gallus similar to oxidative stress responsive 1 (LOC426458), mRNA Length = 1349 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 521 tcgtcgtcctcgtcctcgtc 502
>ref|XM_868822.1| PREDICTED: Bos taurus hypothetical protein LOC616725 (LOC616725), mRNA Length = 522 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 tcgtcctcgtcctcgtccga 369 |||||||||||||||||||| Sbjct: 77 tcgtcctcgtcctcgtccga 58
>ref|XM_865217.1| PREDICTED: Bos taurus similar to Matrix extracellular phosphoglycoprotein precursor (Osteoblast/osteocyte factor 45) (OF45) (LOC613958), mRNA Length = 1416 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 55 gggggagaaaagaaagagaacaaa 78 ||||||||||| |||||||||||| Sbjct: 670 gggggagaaaacaaagagaacaaa 693
>ref|NM_001013375.1| Mus musculus WD repeat domain 50 (Wdr50), mRNA Length = 2613 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tcagaagaagaagcagccag 127 |||||||||||||||||||| Sbjct: 496 tcagaagaagaagcagccag 515
>gb|AC126041.3| Mus musculus BAC clone RP24-268A23 from chromosome 18, complete sequence Length = 168391 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 98 aagaagaagatcagaagaagaagcagccagc 128 |||||||||| ||||||||||||||||||| Sbjct: 103355 aagaagaaga--agaagaagaagcagccagc 103383
>gb|AC158582.2| Mus musculus chromosome 7, clone RP24-173K12, complete sequence Length = 169636 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 90 aacaacaaaagaagaagatcagaagaagaag 120 |||||||||||||||||| ||||||||||| Sbjct: 33735 aacaacaaaagaagaaga--agaagaagaag 33763
>gb|AY524544.1| Streptomyces chrysomallus ectoine biosynthesis gene cluster, complete sequence Length = 3366 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 316 ggctgcggccgcaccggcgg 335 |||||||||||||||||||| Sbjct: 1436 ggctgcggccgcaccggcgg 1455
>gb|AY273869.1| Pseudomonas aeruginosa PA14 pathogenicity island PAPI-1, complete sequence Length = 111332 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 10406 tcgtcgtcctcgtcctcgtc 10425
>gb|AC115121.5| Mus musculus BAC clone RP23-204O13 from chromosome 19, complete sequence Length = 227154 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 90 aacaacaaaagaagaagatcagaagaagaag 120 |||||||||||||||||| ||||||||||| Sbjct: 140256 aacaacaaaagaagaaga--agaagaagaag 140228
>gb|AC006330.5| Homo sapiens BAC clone RP11-229D13 from 7, complete sequence Length = 96299 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 227 cagcttgaattttcttcttc 246 |||||||||||||||||||| Sbjct: 55547 cagcttgaattttcttcttc 55566
>gb|AC096226.12| Rattus norvegicus 18 BAC CH230-26M18 (Children's Hospital Oakland Research Institute) complete sequence Length = 232962 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 110 agaagaagaagcagccagca 129 |||||||||||||||||||| Sbjct: 174942 agaagaagaagcagccagca 174961
>ref|XM_850011.1| PREDICTED: Canis familiaris similar to RING finger and KH domain containing protein 1 (LOC612270), mRNA Length = 1656 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 1429 tcgtcgtcctcgtcctcgtc 1448
>ref|XM_542197.2| PREDICTED: Canis familiaris similar to Transcription factor E2-alpha (Immunoglobulin enhancer binding factor E12/E47) (Transcription factor-3) (TCF-3) (Immunoglobulin transcription factor-1) (Transcription factor ITF-1) (Kappa-E2-binding factor) (LOC485079), mRNA Length = 1899 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 349 gtcgtcctcgtcctcgtccg 368 |||||||||||||||||||| Sbjct: 1542 gtcgtcctcgtcctcgtccg 1523
>emb|CT025527.7| Mouse DNA sequence from clone RP23-279J20 on chromosome 16, complete sequence Length = 202976 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 136197 tcgtcgtcctcgtcctcgtc 136178
>emb|X14112.1|HE1CG Human herpesvirus 1 complete genome Length = 152261 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 147721 tcgtcgtcctcgtcctcgtc 147702 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 130512 tcgtcgtcctcgtcctcgtc 130531
>gb|AC115302.4| Mus musculus BAC clone RP24-107D24 from chromosome 18, complete sequence Length = 162927 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 gggggagaaaagaaagagaa 74 |||||||||||||||||||| Sbjct: 95330 gggggagaaaagaaagagaa 95311
>gb|BC107561.1| Rattus norvegicus pleckstrin homology domain containing, family H (with MyTH4 domain) member 3, mRNA (cDNA clone MGC:124855 IMAGE:7937018), complete cds Length = 3001 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 gtctcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||| |||||| Sbjct: 537 gtctcgtcgtcctcgtcttcgtcc 514
>gb|AC134446.4| Mus musculus BAC clone RP24-173D10 from chromosome 17, complete sequence Length = 131657 Score = 40.1 bits (20), Expect = 6.4 Identities = 35/39 (89%), Gaps = 2/39 (5%) Strand = Plus / Plus Query: 98 aagaagaagatcagaagaagaagcagc--cagcaagaag 134 |||||||||| ||||||||||||||| |||||||||| Sbjct: 35305 aagaagaagaaaagaagaagaagcagcagcagcaagaag 35343
>gb|AC122252.4| Mus musculus BAC clone RP23-170E7 from chromosome 17, complete sequence Length = 219695 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 gggagaaaagaaagagaacaaaaa 80 |||||||||||||||||| ||||| Sbjct: 192336 gggagaaaagaaagagaagaaaaa 192313
>emb|AL132848.1|CEY47H10A Caenorhabditis elegans YAC Y47H10A, complete sequence Length = 31521 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 gcttgaattttcttcttctt 248 |||||||||||||||||||| Sbjct: 5090 gcttgaattttcttcttctt 5109
>gb|AC122341.3| Mus musculus BAC clone RP23-355F8 from chromosome 15, complete sequence Length = 198612 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 tagtaacctatccaaatcca 157 |||||||||||||||||||| Sbjct: 46161 tagtaacctatccaaatcca 46142
>gb|AC124173.2| Mus musculus BAC clone RP23-173I4 from 13, complete sequence Length = 207960 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 90 aacaacaaaagaagaagatcagaagaagaag 120 |||||||||||||||||| ||||||||||| Sbjct: 39268 aacaacaaaagaagaaga--agaagaagaag 39240
>emb|BX537348.8| Zebrafish DNA sequence from clone CH211-218O21 in linkage group 8, complete sequence Length = 207282 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ggcggaggagggcttctttc 416 |||||||||||||||||||| Sbjct: 102813 ggcggaggagggcttctttc 102794
>gb|AC107765.9| Mus musculus chromosome 17, clone RP23-166P7, complete sequence Length = 229687 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 90 aacaacaaaagaagaagatcagaagaagaag 120 |||||||||||||||||| ||||||||||| Sbjct: 157924 aacaacaaaagaagaaga--agaagaagaag 157952
>ref|NM_001037202.1| Rattus norvegicus pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 (Plekhh3), mRNA Length = 3001 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 gtctcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||| |||||| Sbjct: 537 gtctcgtcgtcctcgtcttcgtcc 514
>gb|AC163721.4| Mus musculus BAC clone RP23-446B19 from chromosome 13, complete sequence Length = 184728 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 90 aacaacaaaagaagaagatcagaagaagaag 120 |||||||||||||||||| ||||||||||| Sbjct: 94766 aacaacaaaagaagaaga--agaagaagaag 94738
>emb|CR636876.2|CNS0EQDU Tetraodon nigroviridis full-length cDNA Length = 1630 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 tcgtcctcgtcctcgtccga 369 |||||||||||||||||||| Sbjct: 25 tcgtcctcgtcctcgtccga 6
>gb|AC120779.24| Mus musculus strain C57BL/6J clone rp23-194d11 map 17, complete sequence Length = 235634 Score = 40.1 bits (20), Expect = 6.4 Identities = 35/39 (89%), Gaps = 2/39 (5%) Strand = Plus / Plus Query: 98 aagaagaagatcagaagaagaagcagc--cagcaagaag 134 |||||||||| ||||||||||||||| |||||||||| Sbjct: 28193 aagaagaagaaaagaagaagaagcagcagcagcaagaag 28231
>gb|AC118543.30| Mus musculus strain C57BL/6J clone rp23-254b17 map 17, complete sequence Length = 241570 Score = 40.1 bits (20), Expect = 6.4 Identities = 35/39 (89%), Gaps = 2/39 (5%) Strand = Plus / Plus Query: 98 aagaagaagatcagaagaagaagcagc--cagcaagaag 134 |||||||||| ||||||||||||||| |||||||||| Sbjct: 232597 aagaagaagaaaagaagaagaagcagcagcagcaagaag 232635
>gb|AC115910.6| Mus musculus, clone RP24-480O17, complete sequence Length = 257036 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 gggagaaaagaaagagaacaaaaa 80 ||||||||||||||| |||||||| Sbjct: 125156 gggagaaaagaaagaaaacaaaaa 125179
>gb|AC160638.6| Mus musculus BAC clone RP23-99K6 from chromosome 15, complete sequence Length = 218870 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 138 tagtaacctatccaaatcca 157 |||||||||||||||||||| Sbjct: 173562 tagtaacctatccaaatcca 173543
>gb|AF543417.1| Zea mays major facilitator superfamily antiporter (mfs2) mRNA, complete cds Length = 1629 Score = 40.1 bits (20), Expect = 6.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 153 atccatgcacagcatgcacgcacgcagc 180 ||||||||| |||| ||||||||||||| Sbjct: 1404 atccatgcagagcacgcacgcacgcagc 1377
>emb|AL139423.25| Human DNA sequence from clone RP4-734G22 on chromosome 1 Contains the 3' end of the PEX14 gene for peroxisomal biogenesis factor 14, the 3' end of the gene for a novel protein (FLJ34970, FLJ20321, FLJ12223) and two CpG islands, complete sequence Length = 143285 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 47711 tcgtcgtcctcgtcctcgtc 47730
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 424 cagcggcgcggacgccggcggctt 447 ||||||||||||| |||||||||| Sbjct: 222963 cagcggcgcggacaccggcggctt 222940
>emb|X81888.1|MPNARA2S M.persicae mRNA for nicotinic acetylcholine receptor alpha 2 subunit Length = 2339 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 351 cgtcctcgtcctcgtccgac 370 |||||||||||||||||||| Sbjct: 1393 cgtcctcgtcctcgtccgac 1374
>emb|X15078.1|HCRPLCLU Halobium cutirubrum L11, L1, L10 and L12 equivalent ribosomal protein gene cluster Length = 5146 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 415 tcccggggccagcggcgcgg 434 |||||||||||||||||||| Sbjct: 4650 tcccggggccagcggcgcgg 4631
>emb|CR555306.1| Azoarcus sp. EbN1 complete genome Length = 4296230 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 312 cgacggctgcggccgcaccg 331 |||||||||||||||||||| Sbjct: 1729844 cgacggctgcggccgcaccg 1729825
>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16 Length = 346274 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 205718 tcgtcgtcctcgtcctcgtc 205737
>emb|BX640429.1| Bordetella parapertussis strain 12822, complete genome; segment 7/14 Length = 344321 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 4616 tcgtcgtcctcgtcctcgtc 4635
>emb|AL663078.8| Mouse DNA sequence from clone RP23-440P13 on chromosome 11 Contains the gene for a novel protein (6230425C22Rik) similar to Homo sapiens CGI-48 protein, the 5' end of the Mbtd1 gene for mbt domain containing 1 and one CpG island, complete sequence Length = 126275 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 tcagaagaagaagcagccag 127 |||||||||||||||||||| Sbjct: 90750 tcagaagaagaagcagccag 90731
>emb|AL031765.1|DMC22E5 Drosophila melanogaster cosmid clone 22E5 Length = 45672 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 gatcagaagaagaagcagcc 125 |||||||||||||||||||| Sbjct: 27577 gatcagaagaagaagcagcc 27558
>emb|AJ292755.1|AGA292755 Anopheles gambiae mRNA for integrin beta subunit (bint gene) Length = 4179 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgt 365 |||||||||||||||||||| Sbjct: 501 ctcgtcgtcctcgtcctcgt 520
>gb|AC010664.7| Drosophila melanogaster 3L BAC RP98-2G4 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 155615 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 138373 tcgtcgtcctcgtcctcgtc 138354
>gb|AC112727.4| Drosophila melanogaster 3L BAC RP98-15L14 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 157739 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 123903 tcgtcgtcctcgtcctcgtc 123884
>gb|AE005722.1| Caulobacter crescentus CB15 section 48 of 359 of the complete genome Length = 12112 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 426 gcggcgcggacgccggcggc 445 |||||||||||||||||||| Sbjct: 1258 gcggcgcggacgccggcggc 1239
>gb|AC105445.3| Homo sapiens BAC clone RP11-350B19 from 4, complete sequence Length = 128907 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 caaaagaagaagatcagaagaaga 118 |||||||||| ||||||||||||| Sbjct: 10773 caaaagaagaggatcagaagaaga 10750
>gb|AC023310.4| Homo sapiens chromosome 15, clone RP11-336L20, complete sequence Length = 177355 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 atcagaagaagaagcagccagcaa 130 ||||||||||||||||| |||||| Sbjct: 28291 atcagaagaagaagcaggcagcaa 28268
>gb|AC105055.2| Drosophila melanogaster X BAC RP98-5N9 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 169618 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 gatcagaagaagaagcagcc 125 |||||||||||||||||||| Sbjct: 168172 gatcagaagaagaagcagcc 168153
>tpg|BK003497.1| TPA: TPA_inf: Drosophila melanogaster HDC02776 (HDC02776) gene, complete cds Length = 276 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 cgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||| Sbjct: 114 cgtcgtcctcgtcctcgtcc 133
>ref|NM_135060.2| Drosophila melanogaster CG31918-PA (CG31918) mRNA, complete cds Length = 2268 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 cagaagaagaagcagccagc 128 |||||||||||||||||||| Sbjct: 156 cagaagaagaagcagccagc 137
>gb|AF169823.1| Spodoptera exigua nucleopolyhedrovirus complete genome Length = 135611 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 135237 tcgtcgtcctcgtcctcgtc 135256
>ref|NM_130616.2| Drosophila melanogaster CG4290-RA (CG4290), mRNA Length = 4622 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 106 gatcagaagaagaagcagcc 125 |||||||||||||||||||| Sbjct: 501 gatcagaagaagaagcagcc 520
>gb|AC113165.1| Homo sapiens chromosome 5 clone RP11-213E1, complete sequence Length = 140640 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 223 ctcccagcttgaattttctt 242 |||||||||||||||||||| Sbjct: 6124 ctcccagcttgaattttctt 6105
>gb|AC100757.2| Homo sapiens chromosome 15, clone RP11-566K19, complete sequence Length = 171987 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 atcagaagaagaagcagccagcaa 130 ||||||||||||||||| |||||| Sbjct: 12268 atcagaagaagaagcaggcagcaa 12245
>gb|AC104119.2| Homo sapiens chromosome 5 clone RP11-34D23, complete sequence Length = 168108 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 223 ctcccagcttgaattttctt 242 |||||||||||||||||||| Sbjct: 44528 ctcccagcttgaattttctt 44547
>gb|AF372498.1|AF372498 Glycine max GT-2 factor mRNA, partial cds Length = 1279 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 1017 tcgtcgtcctcgtcctcgtc 998
>gb|AC104146.4| Drosophila melanogaster X BAC RP98-32O19 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 177724 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 gatcagaagaagaagcagcc 125 |||||||||||||||||||| Sbjct: 34597 gatcagaagaagaagcagcc 34578
>dbj|AK154637.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630101N03 product:Weakly similar to hypothetical WD-repeat protein CGI-48 (Fragment), full insert sequence Length = 1845 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tcagaagaagaagcagccag 127 |||||||||||||||||||| Sbjct: 436 tcagaagaagaagcagccag 455
>dbj|AK154510.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630041G20 product:hypothetical Core domain in kinesin and myosin motor/Pleckstrin-like/Band 4.1/PH domain profile/FERM domain profile/Proline-rich region profile/Ras-associating (RA) domain profile/Pleckstrin-homology-related/FERM/Peptidase S1, chymotrypsin containing protein, full insert sequence Length = 3010 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 gtctcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||| |||||| Sbjct: 554 gtctcgtcgtcctcgtcttcgtcc 531
>gb|AC021639.5| Drosophila melanogaster, chromosome X, region 12E-12E, BAC clone BACR02C24, complete sequence Length = 234783 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 102953 tcgtcgtcctcgtcctcgtc 102934
>gb|AY061394.1| Drosophila melanogaster LD31822 full length cDNA Length = 2280 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 cagaagaagaagcagccagc 128 |||||||||||||||||||| Sbjct: 156 cagaagaagaagcagccagc 137
>dbj|AK164128.1| Mus musculus 12 days embryo spinal cord cDNA, RIKEN full-length enriched library, clone:C530042D12 product:hypothetical Band 4.1/FERM domain profile/Proline-rich region profile/Ras-associating (RA) domain profile/FERM containing protein, full insert sequence Length = 3016 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 gtctcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||| |||||| Sbjct: 554 gtctcgtcgtcctcgtcttcgtcc 531
>gb|AC024918.5| Homo sapiens chromosome 17, clone RP11-254J21, complete sequence Length = 172784 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 55 gggggagaaaagaaagagaa 74 |||||||||||||||||||| Sbjct: 106649 gggggagaaaagaaagagaa 106630
>gb|BC020025.1| Mus musculus pleckstrin homology domain containing, family H (with MyTH4 domain) member 3, mRNA (cDNA clone MGC:27854 IMAGE:3490992), complete cds Length = 3020 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 gtctcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||| |||||| Sbjct: 538 gtctcgtcgtcctcgtcttcgtcc 515
>ref|NM_146030.1| Mus musculus pleckstrin homology domain containing, family H (with MyTH4 domain) member 3 (Plekhh3), mRNA Length = 3020 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 344 gtctcgtcgtcctcgtcctcgtcc 367 ||||||||||||||||| |||||| Sbjct: 538 gtctcgtcgtcctcgtcttcgtcc 515
>ref|XM_704687.1| PREDICTED: Danio rerio hypothetical protein LOC553406, transcript variant 2 (LOC553406), mRNA Length = 5737 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ggcggaggagggcttctttc 416 |||||||||||||||||||| Sbjct: 3835 ggcggaggagggcttctttc 3816
>ref|XM_704688.1| PREDICTED: Danio rerio hypothetical protein LOC553406, transcript variant 3 (LOC553406), mRNA Length = 5731 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ggcggaggagggcttctttc 416 |||||||||||||||||||| Sbjct: 3829 ggcggaggagggcttctttc 3810
>ref|XM_678828.1| PREDICTED: Danio rerio hypothetical protein LOC553406, transcript variant 1 (LOC553406), mRNA Length = 5848 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ggcggaggagggcttctttc 416 |||||||||||||||||||| Sbjct: 3829 ggcggaggagggcttctttc 3810
>dbj|AK167248.1| Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0045L22 product:similar to WD-repeat protein CGI-48 [Homo sapiens], full insert sequence Length = 2810 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tcagaagaagaagcagccag 127 |||||||||||||||||||| Sbjct: 495 tcagaagaagaagcagccag 514
>gb|AC123664.15| Mus musculus chromosome 5, clone RP23-224P16, complete sequence Length = 226777 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Plus Query: 90 aacaacaaaagaagaagatcagaagaagaag 120 |||||||||||||||||| ||||||||||| Sbjct: 43318 aacaacaaaagaagaaga--agaagaagaag 43346
>gb|AC156637.2| Mus musculus BAC clone RP24-241I18 from chromosome 12, complete sequence Length = 156014 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 gggagaaaagaaagagaacaaaaa 80 ||||||||||||||| |||||||| Sbjct: 155291 gggagaaaagaaagaaaacaaaaa 155314
>emb|CR385182.1| Gallus gallus finished cDNA, clone ChEST752d1 Length = 768 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 116 agaagcagccagcaagaagt 135 |||||||||||||||||||| Sbjct: 432 agaagcagccagcaagaagt 413
>dbj|AK032265.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length enriched library, clone:6430513M13 product:weakly similar to HYPOTHETICAL WD-REPEAT PROTEIN CGI-48 [Homo sapiens], full insert sequence Length = 3110 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 108 tcagaagaagaagcagccag 127 |||||||||||||||||||| Sbjct: 440 tcagaagaagaagcagccag 459
>gb|AC092400.1|AC092400 Drosophila melanogaster, chromosome 2L, region 36D-36E, BAC clone BACR39L06, complete sequence Length = 178953 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||| Sbjct: 55048 cgtcgtcctcgtcctcgtcc 55029
>gb|AC092396.1|AC092396 Drosophila melanogaster, chromosome 2L, region 36X-36X, BAC clone BACR21C10, complete sequence Length = 164439 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 cgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||| Sbjct: 23061 cgtcgtcctcgtcctcgtcc 23080
>dbj|AK047938.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130022M03 product:unclassifiable, full insert sequence Length = 2590 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 gggagaaaagaaagagaacaaaaa 80 |||||||||||||||||| ||||| Sbjct: 1290 gggagaaaagaaagagaaaaaaaa 1313
>dbj|AK047371.1| Mus musculus 10 days neonate cerebellum cDNA, RIKEN full-length enriched library, clone:B930053L08 product:unclassifiable, full insert sequence Length = 4028 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 57 gggagaaaagaaagagaacaaaaa 80 |||||||||||||||||| ||||| Sbjct: 2194 gggagaaaagaaagagaaaaaaaa 2217
>gb|BC093434.1| Danio rerio hypothetical protein LOC553406, mRNA (cDNA clone IMAGE:7158173), partial cds Length = 1383 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 ggcggaggagggcttctttc 416 |||||||||||||||||||| Sbjct: 674 ggcggaggagggcttctttc 655
>gb|AC006762.2| Caenorhabditis elegans cosmid Y42G9A, complete sequence Length = 30585 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 229 gcttgaattttcttcttctt 248 |||||||||||||||||||| Sbjct: 27384 gcttgaattttcttcttctt 27403
>ref|XM_393227.2| PREDICTED: Apis mellifera similar to GA17495-PA (LOC409729), mRNA Length = 7938 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 1021 tcgtcgtcctcgtcctcgtc 1040
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 23566342 tcgtcgtcctcgtcctcgtc 23566323
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||| Sbjct: 19625665 cgtcgtcctcgtcctcgtcc 19625646 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 11808122 tcgtcgtcctcgtcctcgtc 11808141 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 4350176 tcgtcgtcctcgtcctcgtc 4350195
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||| Sbjct: 35286384 cgtcgtcctcgtcctcgtcc 35286365 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 6450251 tcgtcgtcctcgtcctcgtc 6450232
>gb|AC008233.3|AC008233 Drosophila melanogaster, chromosome 2L, region 25C-25C, BAC clone BACR13M11, complete sequence Length = 162387 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cagaagaagaagcagccagc 128 |||||||||||||||||||| Sbjct: 114389 cagaagaagaagcagccagc 114408
>gb|AC154537.3| Mus musculus BAC clone RP23-451F20 from chromosome 13, complete sequence Length = 181229 Score = 40.1 bits (20), Expect = 6.4 Identities = 29/31 (93%), Gaps = 2/31 (6%) Strand = Plus / Minus Query: 90 aacaacaaaagaagaagatcagaagaagaag 120 |||||||||||||||||| ||||||||||| Sbjct: 140383 aacaacaaaagaagaaga--agaagaagaag 140355
>gb|L00036.1|HS1US Human herpesvirus strain 17 complete short unique region with partial terminal and inverted repeats DNA, complete cds Length = 26245 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 21705 tcgtcgtcctcgtcctcgtc 21686 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 4541 tcgtcgtcctcgtcctcgtc 4560
>gb|AC006460.4| Homo sapiens BAC clone RP11-284E5 from 2, complete sequence Length = 193015 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 235 attttcttcttcttacaaga 254 |||||||||||||||||||| Sbjct: 73314 attttcttcttcttacaaga 73295
>gb|AC008050.6|AC008050 Homo sapiens chromosome 14 clone RP11-141I24 map 14q24.3, complete sequence Length = 176975 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 234 aattttcttcttcttacaag 253 |||||||||||||||||||| Sbjct: 90430 aattttcttcttcttacaag 90449
>gb|AF003627.3| Homo sapiens chromosome X multiple clones map q28, complete sequence Length = 184788 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 gaaaagaaagagaacaaaaa 80 |||||||||||||||||||| Sbjct: 51584 gaaaagaaagagaacaaaaa 51603
>gb|AC134676.5| Homo sapiens chromosome 15, clone CTD-2290E14, complete sequence Length = 93881 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 atcagaagaagaagcagccagcaa 130 ||||||||||||||||| |||||| Sbjct: 55799 atcagaagaagaagcaggcagcaa 55776
>gb|AC136687.6| Homo sapiens chromosome 15, clone RP11-439M15, complete sequence Length = 180708 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 atcagaagaagaagcagccagcaa 130 ||||||||||||||||| |||||| Sbjct: 165708 atcagaagaagaagcaggcagcaa 165731
>gb|AC134393.6| Homo sapiens chromosome 15, clone CTC-803A3, complete sequence Length = 132353 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 107 atcagaagaagaagcagccagcaa 130 ||||||||||||||||| |||||| Sbjct: 55881 atcagaagaagaagcaggcagcaa 55858
>gb|AC131280.9| Homo sapiens chromosome 15, clone RP11-467L19, complete sequence Length = 194754 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 107 atcagaagaagaagcagccagcaa 130 ||||||||||||||||| |||||| Sbjct: 135301 atcagaagaagaagcaggcagcaa 135324
>gb|AC011372.7| Homo sapiens chromosome 5 clone CTB-108B20, complete sequence Length = 183330 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 tcctcccagcttgaattttc 240 |||||||||||||||||||| Sbjct: 25831 tcctcccagcttgaattttc 25812
>dbj|AP006723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1203H11 Length = 156561 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 gtcgtcctcgtcctcgtccg 368 |||||||||||||||||||| Sbjct: 56943 gtcgtcctcgtcctcgtccg 56962
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||| Sbjct: 36718 cgtcgtcctcgtcctcgtcc 36699
>dbj|AP003489.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0568D10 Length = 63101 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 41756 tcgtcgtcctcgtcctcgtc 41775
>dbj|AP005805.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0006M19 Length = 144073 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 76057 tcgtcgtcctcgtcctcgtc 76076
>dbj|AP004794.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0506C10 Length = 150549 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||| Sbjct: 107397 cgtcgtcctcgtcctcgtcc 107378
>dbj|AP005723.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0001B21 Length = 143722 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||| Sbjct: 10121 cgtcgtcctcgtcctcgtcc 10102
>dbj|AP004039.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1006_D05 Length = 128178 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 92244 tcgtcgtcctcgtcctcgtc 92225
>dbj|AP003747.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1127_E01 Length = 123787 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 18783 tcgtcgtcctcgtcctcgtc 18764
>dbj|AP004185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1301_C12 Length = 128396 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 126735 tcgtcgtcctcgtcctcgtc 126716
>dbj|AP005846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1307A11 Length = 131538 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 10864 tcgtcgtcctcgtcctcgtc 10845
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 348 cgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||| Sbjct: 98434 cgtcgtcctcgtcctcgtcc 98415
>gb|AE005041.1| Halobacterium sp. NRC-1 section 72 of 170 of the complete genome Length = 13759 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 415 tcccggggccagcggcgcgg 434 |||||||||||||||||||| Sbjct: 13502 tcccggggccagcggcgcgg 13521
>emb|X06461.1|HEHSV1G3 Herpes simplex virus type I immediate early (IE) gene 3 for transcriptional activator IE175 (= ICP 4) Length = 6633 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 2093 tcgtcgtcctcgtcctcgtc 2074
>dbj|AP006617.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0091F23 Length = 147699 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 gtcgtcctcgtcctcgtccg 368 |||||||||||||||||||| Sbjct: 10785 gtcgtcctcgtcctcgtccg 10804
>dbj|AK111473.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-183-F03, full insert sequence Length = 1613 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 349 gtcgtcctcgtcctcgtccg 368 |||||||||||||||||||| Sbjct: 1109 gtcgtcctcgtcctcgtccg 1128
>ref|XM_311354.2| Anopheles gambiae str. PEST ENSANGP00000021373 (ENSANGG00000018884), mRNA Length = 4648 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 ctcgtcgtcctcgtcctcgt 365 |||||||||||||||||||| Sbjct: 472 ctcgtcgtcctcgtcctcgt 491
>dbj|AK110100.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-160-H07, full insert sequence Length = 2240 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 346 ctcgtcgtcctcgtcctcgtccga 369 ||||||||||||||| |||||||| Sbjct: 1719 ctcgtcgtcctcgtcgtcgtccga 1696
>dbj|AK110013.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-159-G12, full insert sequence Length = 3291 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 929 tcgtcgtcctcgtcctcgtc 910
>emb|AJ326466.1|HSA326466 Homo sapiens genomic sequence surrounding NotI site, clone NL6-AD14C Length = 615 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 191 tcgtcgtcctcgtcctcgtc 172
>dbj|AK071674.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023107L13, full insert sequence Length = 2059 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 234 tcgtcgtcctcgtcctcgtc 215
>gb|AC025715.3| Caenorhabditis elegans cosmid Y38F2AR, complete sequence Length = 97157 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 229 gcttgaattttcttcttctt 248 |||||||||||||||||||| Sbjct: 332 gcttgaattttcttcttctt 313
>dbj|AK060649.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-H01, full insert sequence Length = 1377 Score = 40.1 bits (20), Expect = 6.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 313 gacggctgcggccgcaccggcggg 336 |||||||||||||| ||||||||| Sbjct: 997 gacggctgcggccggaccggcggg 974
>emb|CT797314.2| Pan troglodytes chromosome X clone CH251-171B18 map Xq28, complete sequence Length = 178731 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 61 gaaaagaaagagaacaaaaa 80 |||||||||||||||||||| Sbjct: 145774 gaaaagaaagagaacaaaaa 145793
>gb|AC156387.5| Mus musculus 10 BAC RP24-396H15 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 230270 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 agccagcaagaagtagtagt 141 |||||||||||||||||||| Sbjct: 45590 agccagcaagaagtagtagt 45609
>gb|AE003650.2| Drosophila melanogaster chromosome 2L, section 59 of 83 of the complete sequence Length = 273414 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 348 cgtcgtcctcgtcctcgtcc 367 |||||||||||||||||||| Sbjct: 58822 cgtcgtcctcgtcctcgtcc 58841
>gb|U86868.1|CPU86868 Chipmunk parvovirus non-structural protein 1 (NS1) gene, complete cds, and capsid protein (VP1) gene, partial cds Length = 5097 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 347 tcgtcgtcctcgtcctcgtc 366 |||||||||||||||||||| Sbjct: 1939 tcgtcgtcctcgtcctcgtc 1920
>gb|AE003608.5| Drosophila melanogaster chromosome 2L, section 17 of 83 of the complete sequence Length = 174887 Score = 40.1 bits (20), Expect = 6.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 109 cagaagaagaagcagccagc 128 |||||||||||||||||||| Sbjct: 116662 cagaagaagaagcagccagc 116681 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 6,602,425 Number of Sequences: 3902068 Number of extensions: 6602425 Number of successful extensions: 157170 Number of sequences better than 10.0: 266 Number of HSP's better than 10.0 without gapping: 260 Number of HSP's successfully gapped in prelim test: 13 Number of HSP's that attempted gapping in prelim test: 154771 Number of HSP's gapped (non-prelim): 2403 length of query: 476 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 454 effective length of database: 17,147,199,772 effective search space: 7784828696488 effective search space used: 7784828696488 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
