Clone Name	rbart41g02
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|AY107894.1| Zea mays PCO107975 mRNA sequence	86	1e-13
2	dbj|AK106114.1| Oryza sativa (japonica cultivar-group) cDNA clon...	78	3e-11
3	dbj|AK069046.1| Oryza sativa (japonica cultivar-group) cDNA clon...	78	3e-11
4	gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 geno...	66	1e-07
5	gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3	66	1e-07
6	dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D...	66	1e-07
7	gb|AY112540.1| Zea mays CL33472_1 mRNA sequence	62	2e-06
8	gb|AY541627.1| Leiognathus elongatus from Japan cytochrome oxida...	46	0.100
9	gb|AY666511.1| Piranga olivacea voucher 1B-1258 cytochrome oxida...	44	0.39
10	gb|AC110898.7| Mus musculus chromosome 18, clone RP24-114C6, com...	44	0.39
11	gb|AY275859.1| Cypseloides rutilus cytochrome oxidase subunit I ...	44	0.39
12	gb|AF391350.1| Stiphodon elegans cytochrome c oxidase subunit I ...	44	0.39
13	gb|AF460846.1| Cynocephalus variegatus mitochondrion, complete g...	44	0.39
14	emb|AL954143.9| Zebrafish DNA sequence from clone CH211-206A7 in...	44	0.39
15	emb|AL672103.10| Mouse DNA sequence from clone RP23-375G11 on ch...	44	0.39
16	gb|AF165496.1| Ortalis canicollis cytochrome oxidase subunit I (...	42	1.6
17	gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genom...	42	1.6
18	gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, com...	42	1.6
19	emb|AL159996.7| Human DNA sequence from clone RP11-401F12 on chr...	42	1.6
20	gb|AC122587.5| Rattus norvegicus BAC CH230-173H6 (Children's Ho...	42	1.6
21	gb|AC096749.2| Homo sapiens BAC clone RP11-415L23 from 4, comple...	42	1.6
22	gb|AC159028.3| Pan troglodytes BAC clone CH251-413M12 from chrom...	42	1.6
23	gb|AC161820.5| Pan troglodytes BAC clone CH251-502M7 from chromo...	42	1.6
24	dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D...	42	1.6
25	dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic D...	42	1.6
26	emb|BX323588.10| Zebrafish DNA sequence from clone DKEY-225F23 i...	42	1.6
27	dbj|AB034825.1| Diplophos taenia mitochondrial DNA, complete genome	42	1.6
28	gb|AY666413.1| Bombycilla garrulus voucher 1B-2754 cytochrome ox...	40	6.1
29	gb|AC120348.9| Mus musculus chromosome 5, clone RP23-55P22, comp...	40	6.1
30	ref|XM_450393.1| Oryza sativa (japonica cultivar-group), mRNA	40	6.1
31	gb|AC103637.11| Mus musculus chromosome 3, clone RP24-376O20, co...	40	6.1
32	gb|AC115932.11| Mus musculus chromosome 1, clone RP24-538F21, co...	40	6.1
33	gb|AC164649.4| Mus musculus BAC clone RP23-437D10 from chromosom...	40	6.1
34	gb|AC115746.10| Mus musculus chromosome 15, clone RP23-3J8, comp...	40	6.1
35	gb|AC139377.4| Mus musculus chromosome 5 clone RP24-291G12, comp...	40	6.1
36	gb|AC140042.19| Mus musculus chromosome 5, clone RP23-437D10, co...	40	6.1
37	gb|AC124987.9| Mus musculus chromosome 3, clone RP24-364E17, com...	40	6.1
38	gb|AC122052.4| Mus musculus BAC clone RP24-462O18 from chromosom...	40	6.1
39	gb|AC110379.3| Mus musculus BAC clone RP24-193N24 from 15, compl...	40	6.1
40	gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, com...	40	6.1
41	emb|BX664742.15| Zebrafish DNA sequence from clone DKEY-193L3 in...	40	6.1
42	emb|AL157787.11| Human DNA sequence from clone RP11-328K1 on chr...	40	6.1
43	gb|CP000089.1| Dechloromonas aromatica RCB, complete genome	40	6.1
44	emb|CR786582.5| Zebrafish DNA sequence from clone DKEYP-14C8 in ...	40	6.1
45	gb|AC090149.6| Homo sapiens chromosome 8, clone RP11-429M12, com...	40	6.1
46	dbj|AP008932.1| Rhodococcus erythropolis PR4 plasmid pREC1, comp...	40	6.1
47	gb|AC090575.11| Homo sapiens chromosome 8, clone RP11-480D6, com...	40	6.1
48	gb|AC037450.6| Homo sapiens chromosome 8, clone RP11-226G12, com...	40	6.1
49	gb|AC097512.2| Homo sapiens BAC clone RP11-412P11 from 4, comple...	40	6.1
50	gb|AC164109.2| Mus musculus BAC clone RP24-142E9 from chromosome...	40	6.1
51	gb|AC161419.2| Mus musculus BAC clone RP23-405I13 from chromosom...	40	6.1
52	gb|AC008654.5|AC008654 Homo sapiens chromosome 5 clone CTB-191B1...	40	6.1
53	gb|DP000030.1| Sus scrofa target 116 genomic scaffold	40	6.1
54	gb|AC022217.5|AC022217 Homo sapiens BAC clone RP11-779O18 from 5...	40	6.1
55	dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D...	40	6.1
56	gb|AC141557.5| Homo sapiens 12 BAC CTD-2318O12 (Cal Tech Human B...	40	6.1
57	gb|AF391378.1| Amblygobius phalaena isolate 2 cytochrome c oxida...	40	6.1
58	gb|AF391372.1| Xenisthmus sp. CET-2001 cytochrome c oxidase subu...	40	6.1
59	gb|AF391367.1| Mogurnda adspersa cytochrome c oxidase subunit I ...	40	6.1
60	gb|AC093756.3| Homo sapiens BAC clone RP11-56A1 from 2, complete...	40	6.1
61	gb|AC009533.10| Homo sapiens 12 BAC RP11-22B23 (Roswell Park Can...	40	6.1
62	dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic D...	40	6.1
63	dbj|AP004261.3| Oryza sativa (japonica cultivar-group) genomic D...	40	6.1
64	dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic D...	40	6.1
65	emb|BX324200.5| Mouse DNA sequence from clone RP23-382H2 on chro...	40	6.1
66	gb|AC002476.1|AC002476 Human PAC clone RP1-318C15 from Xq23, com...	40	6.1
67	gb|AC154846.2| Mus musculus BAC clone RP23-45E1 from 14, complet...	40	6.1
68	dbj|AK063538.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	6.1
69	dbj|AK061510.1| Oryza sativa (japonica cultivar-group) cDNA clon...	40	6.1
70	emb|AJ544610.1|TRU544610 Takifugu rubripes dmd gene for putative...	40	6.1
71	gb|AC164438.3| Mus musculus BAC clone RP23-62L19 from chromosome...	40	6.1
72	dbj|AB241052.1| Distoechurus pennatus mitochondrial DNA, complet...	40	6.1
73	gb|AC120163.10| Mus musculus chromosome 15, clone RP24-466O11, c...	40	6.1
74	emb|AL450397.19| Mouse DNA sequence from clone RP23-100G16 on ch...	40	6.1
75	emb|AL645547.14| Mouse DNA sequence from clone RP23-158M12 on ch...	40	6.1

---

>gb|AY107894.1| Zea mays PCO107975 mRNA sequence
          Length = 988

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 82/95 (86%)
 Strand = Plus / Minus

                                                                       
Query: 350 tctactggcagctcgctaatcgcgatcgctgacccaagacgccagccattctgcacgttg 409
           ||||||||||||| || |||||||| |||||||| ||||  ||||||| |  |||||| |
Sbjct: 534 tctactggcagcttgcgaatcgcgaccgctgaccgaagagcccagccacttggcacgtcg 475

                                              
Query: 410 cctccaacagcttgcctcgccggagcttgctcttc 444
           |||| |||| ||||||||||||||||||| |||||
Sbjct: 474 cctctaacaacttgcctcgccggagcttgatcttc 440

---

>dbj|AK106114.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-207-E02, full
            insert sequence
          Length = 1722

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                        
Query: 350  tctactggcagctcgctaatcgcgatcgctgacccaagacgccagccattctgcacgttg 409
            ||||||||||||| || |||||| |||||||||| | || ||||||||||  ||||||||
Sbjct: 1557 tctactggcagcttgcgaatcgcaatcgctgaccaaggatgccagccatttggcacgttg 1498

                                               
Query: 410  cctccaacagcttgcctcgccggagcttgctcttc 444
            | || |||| |||||||| |||||| ||| |||||
Sbjct: 1497 cttctaacaacttgcctctccggagtttgttcttc 1463

---

>dbj|AK069046.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023009K09, full
            insert sequence
          Length = 1903

 Score = 77.8 bits (39), Expect = 3e-11
 Identities = 81/95 (85%)
 Strand = Plus / Minus

                                                                        
Query: 350  tctactggcagctcgctaatcgcgatcgctgacccaagacgccagccattctgcacgttg 409
            ||||||||||||| || |||||| |||||||||| | || ||||||||||  ||||||||
Sbjct: 1558 tctactggcagcttgcgaatcgcaatcgctgaccaaggatgccagccatttggcacgttg 1499

                                               
Query: 410  cctccaacagcttgcctcgccggagcttgctcttc 444
            | || |||| |||||||| |||||| ||| |||||
Sbjct: 1498 cttctaacaacttgcctctccggagtttgttcttc 1464

---

>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete
              sequence
          Length = 145507

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                          
Query: 350    tctactggcagctcgctaatcgcgatcgctgacccaagacgccagccattctgcacgttg 409
              ||||||||||||| || |||||| |||||||||| | || ||||||||||  ||||||||
Sbjct: 105586 tctactggcagcttgcgaatcgcaatcgctgaccaaggatgccagccatttggcacgttg 105645

                               
Query: 410    cctccaacagcttgcct 426
              | || |||| |||||||
Sbjct: 105646 cttctaacaacttgcct 105662

---

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                            
Query: 350      tctactggcagctcgctaatcgcgatcgctgacccaagacgccagccattctgcacgttg 409
                ||||||||||||| || |||||| |||||||||| | || ||||||||||  ||||||||
Sbjct: 32453458 tctactggcagcttgcgaatcgcaatcgctgaccaaggatgccagccatttggcacgttg 32453517

                                 
Query: 410      cctccaacagcttgcct 426
                | || |||| |||||||
Sbjct: 32453518 cttctaacaacttgcct 32453534



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 329      tcttcctccatccttccttcttcta 353
                |||||||||||||| ||||||||||
Sbjct: 23474914 tcttcctccatcctcccttcttcta 23474938

---

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 65.9 bits (33), Expect = 1e-07
 Identities = 66/77 (85%)
 Strand = Plus / Plus

                                                                            
Query: 350      tctactggcagctcgctaatcgcgatcgctgacccaagacgccagccattctgcacgttg 409
                ||||||||||||| || |||||| |||||||||| | || ||||||||||  ||||||||
Sbjct: 32543968 tctactggcagcttgcgaatcgcaatcgctgaccaaggatgccagccatttggcacgttg 32544027

                                 
Query: 410      cctccaacagcttgcct 426
                | || |||| |||||||
Sbjct: 32544028 cttctaacaacttgcct 32544044



 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 329      tcttcctccatccttccttcttcta 353
                |||||||||||||| ||||||||||
Sbjct: 23467942 tcttcctccatcctcccttcttcta 23467966

---

>gb|AY112540.1| Zea mays CL33472_1 mRNA sequence
          Length = 452

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 37/39 (94%)
 Strand = Plus / Plus

                                                  
Query: 350 tctactggcagctcgctaatcgcgatcgctgacccaaga 388
           |||||||||||||||| ||||||||||||||||| ||||
Sbjct: 383 tctactggcagctcgcgaatcgcgatcgctgaccgaaga 421

---

>gb|AY541627.1| Leiognathus elongatus from Japan cytochrome oxidase subunit I (COI)
           gene, partial cds; mitochondrial
          Length = 632

 Score = 46.1 bits (23), Expect = 0.100
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 329 tcttcctccatccttccttcttctactggca 359
           |||||| |||||||| |||||||||||||||
Sbjct: 252 tcttcccccatcctttcttcttctactggca 282

---

>gb|AY666511.1| Piranga olivacea voucher 1B-1258 cytochrome oxidase subunit 1 (COI)
           gene, partial cds; mitochondrial
          Length = 659

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 330 cttcctccatccttccttcttctact 355
           ||||| ||||||||||||||||||||
Sbjct: 228 cttcccccatccttccttcttctact 253

---

>gb|AC110898.7| Mus musculus chromosome 18, clone RP24-114C6, complete sequence
          Length = 161778

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 329    tcttcctccatccttccttctt 350
              ||||||||||||||||||||||
Sbjct: 127023 tcttcctccatccttccttctt 127044

---

>gb|AY275859.1| Cypseloides rutilus cytochrome oxidase subunit I (COI) gene,
           partial cds; mitochondrial gene for mitochondrial
           product
          Length = 384

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 330 cttcctccatccttccttcttctact 355
           |||||||||||||||||||| |||||
Sbjct: 316 cttcctccatccttccttctcctact 341

---

>gb|AF391350.1| Stiphodon elegans cytochrome c oxidase subunit I gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 1551

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                         
Query: 329 tcttcctccatccttccttcttctactggc 358
           |||||||||||| ||||||||||| |||||
Sbjct: 309 tcttcctccatcattccttcttcttctggc 338

---

>gb|AF460846.1| Cynocephalus variegatus mitochondrion, complete genome
          Length = 16781

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                      
Query: 330  cttcctccatccttccttcttctact 355
            ||||||||||||||||| ||||||||
Sbjct: 5667 cttcctccatccttcctacttctact 5692

---

>emb|AL954143.9| Zebrafish DNA sequence from clone CH211-206A7 in linkage group 19,
             complete sequence
          Length = 168515

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 318   atgagatcaaatcttcctccat 339
             ||||||||||||||||||||||
Sbjct: 91569 atgagatcaaatcttcctccat 91590

---

>emb|AL672103.10| Mouse DNA sequence from clone RP23-375G11 on chromosome X, complete
             sequence
          Length = 196568

 Score = 44.1 bits (22), Expect = 0.39
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 329   tcttcctccatccttccttctt 350
             ||||||||||||||||||||||
Sbjct: 42363 tcttcctccatccttccttctt 42342

---

>gb|AF165496.1| Ortalis canicollis cytochrome oxidase subunit I (COI) gene, partial
           cds; mitochondrial
          Length = 1088

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 330 cttcctccatccttccttcttctactggc 358
           ||||| |||||||||||||| ||||||||
Sbjct: 148 cttcccccatccttccttctcctactggc 176

---

>gb|AC092780.6| Oryza sativa chromosome 3 BAC OSJNBb0079B16 genomic sequence, complete
              sequence
          Length = 144383

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 329    tcttcctccatccttccttcttcta 353
              |||||||||||||| ||||||||||
Sbjct: 107343 tcttcctccatcctcccttcttcta 107319

---

>gb|AC114553.6| Mus musculus chromosome 5, clone RP23-408M16, complete sequence
          Length = 198281

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 182    tccacagtagtataatagtaa 202
              |||||||||||||||||||||
Sbjct: 151331 tccacagtagtataatagtaa 151351

---

>emb|AL159996.7| Human DNA sequence from clone RP11-401F12 on chromosome 9 Contains the
             3' end of a novel gene, complete sequence
          Length = 188357

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 115   tataaacaatttcttcttctt 135
             |||||||||||||||||||||
Sbjct: 53440 tataaacaatttcttcttctt 53460

---

>gb|AC122587.5| Rattus norvegicus  BAC CH230-173H6 (Children's Hospital Oakland
            Research Institute Rat (BN/SsNHsd/MCW) BAC library)
            complete sequence
          Length = 202972

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 328  atcttcctccatccttccttcttct 352
            |||||||||| ||||||||||||||
Sbjct: 7672 atcttcctccttccttccttcttct 7648

---

>gb|AC096749.2| Homo sapiens BAC clone RP11-415L23 from 4, complete sequence
          Length = 112187

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 326   aaatcttcctccatccttcct 346
             |||||||||||||||||||||
Sbjct: 79059 aaatcttcctccatccttcct 79039

---

>gb|AC159028.3| Pan troglodytes BAC clone CH251-413M12 from chromosome unknown,
            complete sequence
          Length = 172935

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 326  aaatcttcctccatccttcct 346
            |||||||||||||||||||||
Sbjct: 1746 aaatcttcctccatccttcct 1726

---

>gb|AC161820.5| Pan troglodytes BAC clone CH251-502M7 from chromosome unknown, complete
             sequence
          Length = 169869

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 326   aaatcttcctccatccttcct 346
             |||||||||||||||||||||
Sbjct: 21705 aaatcttcctccatccttcct 21725

---

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 328      atcttcctccatccttccttcttct 352
                ||||||||||||||| |||||||||
Sbjct: 10810832 atcttcctccatcctcccttcttct 10810808



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 329      tcttcctccatccttccttc 348
                ||||||||||||||||||||
Sbjct: 12458489 tcttcctccatccttccttc 12458508



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 329     tcttcctccatccttccttcttct 352
               ||||||||| ||||||||||||||
Sbjct: 5152952 tcttcctccttccttccttcttct 5152929



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 329     tcttcctccatccttccttcttct 352
               ||||||||| ||||||||||||||
Sbjct: 5144191 tcttcctccttccttccttcttct 5144168

---

>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0512H04
          Length = 151049

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 328   atcttcctccatccttccttcttct 352
             ||||||||||||||| |||||||||
Sbjct: 34555 atcttcctccatcctcccttcttct 34531

---

>emb|BX323588.10| Zebrafish DNA sequence from clone DKEY-225F23 in linkage group 2,
            complete sequence
          Length = 248002

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 22   tgacagcacaaaataaacaga 42
            |||||||||||||||||||||
Sbjct: 4546 tgacagcacaaaataaacaga 4566

---

>dbj|AB034825.1| Diplophos taenia mitochondrial DNA, complete genome
          Length = 16418

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 330  cttcctccatccttccttcttctactggc 358
            |||||||| |||||||||||||| |||||
Sbjct: 5778 cttcctccctccttccttcttctcctggc 5806

---

>gb|AY666413.1| Bombycilla garrulus voucher 1B-2754 cytochrome oxidase subunit 1
           (COI) gene, partial cds; mitochondrial
          Length = 656

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 330 cttcctccatccttccttct 349
           ||||||||||||||||||||
Sbjct: 225 cttcctccatccttccttct 244

---

>gb|AC120348.9| Mus musculus chromosome 5, clone RP23-55P22, complete sequence
          Length = 244565

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 326    aaatcttcctccatccttcc 345
              ||||||||||||||||||||
Sbjct: 128670 aaatcttcctccatccttcc 128689

---

>ref|XM_450393.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1704

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 329 tcttcctccatccttccttcttct 352
           ||||||||| ||||||||||||||
Sbjct: 405 tcttcctccttccttccttcttct 382

---

>gb|AC103637.11| Mus musculus chromosome 3, clone RP24-376O20, complete sequence
          Length = 120487

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   cttcctccatccttccttct 349
             ||||||||||||||||||||
Sbjct: 32148 cttcctccatccttccttct 32167

---

>gb|AC115932.11| Mus musculus chromosome 1, clone RP24-538F21, complete sequence
          Length = 205378

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    ttcctccatccttccttctt 350
              ||||||||||||||||||||
Sbjct: 106033 ttcctccatccttccttctt 106014

---

>gb|AC164649.4| Mus musculus BAC clone RP23-437D10 from chromosome 5, complete sequence
          Length = 215766

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 329    tcttcctccatccttccttc 348
              ||||||||||||||||||||
Sbjct: 180685 tcttcctccatccttccttc 180704

---

>gb|AC115746.10| Mus musculus chromosome 15, clone RP23-3J8, complete sequence
          Length = 214765

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 313    caatcatgagatcaaatctt 332
              ||||||||||||||||||||
Sbjct: 207321 caatcatgagatcaaatctt 207340

---

>gb|AC139377.4| Mus musculus chromosome 5 clone RP24-291G12, complete sequence
          Length = 191100

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 329  tcttcctccatccttccttc 348
            ||||||||||||||||||||
Sbjct: 5311 tcttcctccatccttccttc 5330

---

>gb|AC140042.19| Mus musculus chromosome 5, clone RP23-437D10, complete sequence
          Length = 215786

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 329   tcttcctccatccttccttc 348
             ||||||||||||||||||||
Sbjct: 35082 tcttcctccatccttccttc 35063

---

>gb|AC124987.9| Mus musculus chromosome 3, clone RP24-364E17, complete sequence
          Length = 165330

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 324   tcaaatcttcctccatcctt 343
             ||||||||||||||||||||
Sbjct: 73963 tcaaatcttcctccatcctt 73982

---

>gb|AC122052.4| Mus musculus BAC clone RP24-462O18 from chromosome 3, complete sequence
          Length = 171593

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 330    cttcctccatccttccttct 349
              ||||||||||||||||||||
Sbjct: 145755 cttcctccatccttccttct 145774

---

>gb|AC110379.3| Mus musculus BAC clone RP24-193N24 from 15, complete sequence
          Length = 139884

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 313    caatcatgagatcaaatctt 332
              ||||||||||||||||||||
Sbjct: 119170 caatcatgagatcaaatctt 119189

---

>gb|AC019028.13| Mus musculus chromosome 5, clone RP23-88A22, complete sequence
          Length = 264425

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 326    aaatcttcctccatccttcc 345
              ||||||||||||||||||||
Sbjct: 224212 aaatcttcctccatccttcc 224193

---

>emb|BX664742.15| Zebrafish DNA sequence from clone DKEY-193L3 in linkage group 8, complete
              sequence
          Length = 215608

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 119    aacaatttcttcttcttcct 138
              ||||||||||||||||||||
Sbjct: 195853 aacaatttcttcttcttcct 195834

---

>emb|AL157787.11| Human DNA sequence from clone RP11-328K1 on chromosome 10, complete
             sequence
          Length = 102198

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   cttcctccatccttccttct 349
             ||||||||||||||||||||
Sbjct: 83746 cttcctccatccttccttct 83765

---

>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 148     caacaaccaccagttttaca 167
               ||||||||||||||||||||
Sbjct: 4013273 caacaaccaccagttttaca 4013292

---

>emb|CR786582.5| Zebrafish DNA sequence from clone DKEYP-14C8 in linkage group 13,
              complete sequence
          Length = 194339

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    aacaatttcttcttcttcct 138
              ||||||||||||||||||||
Sbjct: 172042 aacaatttcttcttcttcct 172061

---

>gb|AC090149.6| Homo sapiens chromosome 8, clone RP11-429M12, complete sequence
          Length = 159476

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    ttcctccatccttccttctt 350
              ||||||||||||||||||||
Sbjct: 158004 ttcctccatccttccttctt 157985

---

>dbj|AP008932.1| Rhodococcus erythropolis PR4 plasmid pREC1, complete sequence
          Length = 104014

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 265   agcacagccccgccgtcacc 284
             ||||||||||||||||||||
Sbjct: 33452 agcacagccccgccgtcacc 33433

---

>gb|AC090575.11| Homo sapiens chromosome 8, clone RP11-480D6, complete sequence
          Length = 159531

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    ttcctccatccttccttctt 350
              ||||||||||||||||||||
Sbjct: 158001 ttcctccatccttccttctt 157982

---

>gb|AC037450.6| Homo sapiens chromosome 8, clone RP11-226G12, complete sequence
          Length = 169876

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 331   ttcctccatccttccttctt 350
             ||||||||||||||||||||
Sbjct: 58726 ttcctccatccttccttctt 58745

---

>gb|AC097512.2| Homo sapiens BAC clone RP11-412P11 from 4, complete sequence
          Length = 149282

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 222    acagcaaacaatatcatgga 241
              ||||||||||||||||||||
Sbjct: 116546 acagcaaacaatatcatgga 116565

---

>gb|AC164109.2| Mus musculus BAC clone RP24-142E9 from chromosome 9, complete sequence
          Length = 147109

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 329   tcttcctccatccttccttc 348
             ||||||||||||||||||||
Sbjct: 27684 tcttcctccatccttccttc 27703

---

>gb|AC161419.2| Mus musculus BAC clone RP23-405I13 from chromosome 9, complete sequence
          Length = 213468

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 329   tcttcctccatccttccttc 348
             ||||||||||||||||||||
Sbjct: 31524 tcttcctccatccttccttc 31505

---

>gb|AC008654.5|AC008654 Homo sapiens chromosome 5 clone CTB-191B18, complete sequence
          Length = 63760

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 113   agtataaacaatttcttcttcttc 136
             ||||||||||||||||| ||||||
Sbjct: 48017 agtataaacaatttctttttcttc 47994

---

>gb|DP000030.1| Sus scrofa target 116 genomic scaffold
          Length = 380805

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 325    caaatcttcctccatccttccttc 348
              ||||||||||||| ||||||||||
Sbjct: 332405 caaatcttcctccttccttccttc 332382

---

>gb|AC022217.5|AC022217 Homo sapiens BAC clone RP11-779O18 from 5, complete sequence
          Length = 193960

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 113   agtataaacaatttcttcttcttc 136
             ||||||||||||||||| ||||||
Sbjct: 92815 agtataaacaatttctttttcttc 92792

---

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 119      aacaatttcttcttcttcct 138
                ||||||||||||||||||||
Sbjct: 21994454 aacaatttcttcttcttcct 21994435

---

>gb|AC141557.5| Homo sapiens 12 BAC CTD-2318O12 (Cal Tech Human BAC Library D)
            complete sequence
          Length = 18318

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 330  cttcctccatccttccttct 349
            ||||||||||||||||||||
Sbjct: 3860 cttcctccatccttccttct 3841

---

>gb|AF391378.1| Amblygobius phalaena isolate 2 cytochrome c oxidase subunit I gene,
           partial cds; mitochondrial gene for mitochondrial
           product
          Length = 1551

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 329 tcttcctccatccttccttcttct 352
           |||||| |||||||||||||||||
Sbjct: 309 tcttcccccatccttccttcttct 332

---

>gb|AF391372.1| Xenisthmus sp. CET-2001 cytochrome c oxidase subunit I gene,
           partial cds; mitochondrial gene for mitochondrial
           product
          Length = 1551

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 336 ccatccttccttcttctactggca 359
           ||||||||||||||||| ||||||
Sbjct: 316 ccatccttccttcttcttctggca 339

---

>gb|AF391367.1| Mogurnda adspersa cytochrome c oxidase subunit I gene, partial cds;
           mitochondrial gene for mitochondrial product
          Length = 1551

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 336 ccatccttccttcttctactggca 359
           ||||||||||||||||| ||||||
Sbjct: 316 ccatccttccttcttcttctggca 339

---

>gb|AC093756.3| Homo sapiens BAC clone RP11-56A1 from 2, complete sequence
          Length = 158073

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    atttcttcttcttccttgga 142
              ||||||||||||||||||||
Sbjct: 147456 atttcttcttcttccttgga 147437

---

>gb|AC009533.10| Homo sapiens 12 BAC RP11-22B23 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 162572

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 330   cttcctccatccttccttct 349
             ||||||||||||||||||||
Sbjct: 64810 cttcctccatccttccttct 64829

---

>dbj|AP005829.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1008E06
          Length = 170228

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 329    tcttcctccatccttccttcttct 352
              ||||||||| ||||||||||||||
Sbjct: 155069 tcttcctccttccttccttcttct 155046



 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 329    tcttcctccatccttccttcttct 352
              ||||||||| ||||||||||||||
Sbjct: 146308 tcttcctccttccttccttcttct 146285

---

>dbj|AP004261.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0013G11
          Length = 151405

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   aacaatttcttcttcttcct 138
             ||||||||||||||||||||
Sbjct: 86498 aacaatttcttcttcttcct 86479

---

>dbj|AP005867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0599F09
          Length = 157415

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 329    tcttcctccatccttccttc 348
              ||||||||||||||||||||
Sbjct: 124073 tcttcctccatccttccttc 124092

---

>emb|BX324200.5| Mouse DNA sequence from clone RP23-382H2 on chromosome 2, complete
              sequence
          Length = 180530

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 330    cttcctccatccttccttct 349
              ||||||||||||||||||||
Sbjct: 171968 cttcctccatccttccttct 171949

---

>gb|AC002476.1|AC002476 Human PAC clone RP1-318C15 from Xq23, complete sequence
          Length = 147102

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 85    tcctatacacagaagatctt 104
             ||||||||||||||||||||
Sbjct: 66142 tcctatacacagaagatctt 66123

---

>gb|AC154846.2| Mus musculus BAC clone RP23-45E1 from 14, complete sequence
          Length = 250542

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 325    caaatcttcctccatccttc 344
              ||||||||||||||||||||
Sbjct: 101590 caaatcttcctccatccttc 101609

---

>dbj|AK063538.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-C03, full
           insert sequence
          Length = 1705

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 329 tcttcctccatccttccttcttct 352
           ||||||||| ||||||||||||||
Sbjct: 405 tcttcctccttccttccttcttct 382

---

>dbj|AK061510.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-G01, full
           insert sequence
          Length = 1102

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 119 aacaatttcttcttcttcct 138
           ||||||||||||||||||||
Sbjct: 915 aacaatttcttcttcttcct 896

---

>emb|AJ544610.1|TRU544610 Takifugu rubripes dmd gene for putative dystrophin, exons 21-34
          Length = 20816

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 329  tcttcctccatccttccttc 348
            ||||||||||||||||||||
Sbjct: 5498 tcttcctccatccttccttc 5479

---

>gb|AC164438.3| Mus musculus BAC clone RP23-62L19 from chromosome 9, complete sequence
          Length = 205793

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 331    ttcctccatccttccttctt 350
              ||||||||||||||||||||
Sbjct: 122009 ttcctccatccttccttctt 121990

---

>dbj|AB241052.1| Distoechurus pennatus mitochondrial DNA, complete genome
          Length = 16775

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 330  cttcctccatccttccttct 349
            ||||||||||||||||||||
Sbjct: 5684 cttcctccatccttccttct 5703

---

>gb|AC120163.10| Mus musculus chromosome 15, clone RP24-466O11, complete sequence
          Length = 129237

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 313   caatcatgagatcaaatctt 332
             ||||||||||||||||||||
Sbjct: 70112 caatcatgagatcaaatctt 70093

---

>emb|AL450397.19| Mouse DNA sequence from clone RP23-100G16 on chromosome X, complete
              sequence
          Length = 228645

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 329    tcttcctccatccttccttc 348
              ||||||||||||||||||||
Sbjct: 138759 tcttcctccatccttccttc 138740

---

>emb|AL645547.14| Mouse DNA sequence from clone RP23-158M12 on chromosome X, complete
             sequence
          Length = 173477

 Score = 40.1 bits (20), Expect = 6.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   atttcttcttcttccttgga 142
             ||||||||||||||||||||
Sbjct: 73694 atttcttcttcttccttgga 73675


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,119,531
Number of Sequences: 3902068
Number of extensions: 5119531
Number of successful extensions: 153698
Number of sequences better than 10.0: 75
Number of HSP's better than 10.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 153201
Number of HSP's gapped (non-prelim): 497
length of query: 456
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 434
effective length of database: 17,147,199,772
effective search space: 7441884701048
effective search space used: 7441884701048
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---