>gb|AY101355.1| Opisthonecta matiensis actin II gene, partial cds
          Length = 1105

 Score = 44.1 bits (22), Expect = 0.28
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 38  atagcagaggttttccttaata 59
           ||||||||||||||||||||||
Sbjct: 615 atagcagaggttttccttaata 594

>gb|AY844991.1| Epulopiscium sp. N.l._2_clone_38 16S ribosomal RNA (rrn) gene,
           partial sequence
          Length = 1433

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 307 tttcctctcctgcactccggc 327
           |||||||||||||||||||||
Sbjct: 608 tttcctctcctgcactccggc 588

>gb|AC164536.5| Mus musculus chromosome 18, clone RP23-425H1, complete sequence
          Length = 188835

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 186   tgtatcttttggaaaataaac 206
             |||||||||||||||||||||
Sbjct: 93191 tgtatcttttggaaaataaac 93171

>emb|AL590427.15| Human DNA sequence from clone RP11-396N10 on chromosome 1 Contains the
             5' end of the NTNG1 gene for netrin G1 and a CpG island,
             complete sequence
          Length = 160135

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 304   tgatttcctctcctgcactcc 324
             |||||||||||||||||||||
Sbjct: 51338 tgatttcctctcctgcactcc 51358

>gb|AC093193.11| Homo sapiens Xp BAC RP11-607K23 (Roswell Park Cancer Institute Human
             BAC Library) complete sequence
          Length = 83001

 Score = 42.1 bits (21), Expect = 1.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 202   taaactgtgcattcatcaaca 222
             |||||||||||||||||||||
Sbjct: 13003 taaactgtgcattcatcaaca 12983

>gb|AC121806.3| Mus musculus BAC clone RP23-448L10 from chromosome 7, complete sequence
          Length = 182011

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 193   tttggaaaataaactgtgca 212
             ||||||||||||||||||||
Sbjct: 42886 tttggaaaataaactgtgca 42905

>gb|AC146805.17| Medicago truncatula clone mth2-12n20, complete sequence
          Length = 44109

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   agatgtgtcaactttctgaa 122
             ||||||||||||||||||||
Sbjct: 20962 agatgtgtcaactttctgaa 20981

>emb|AL137003.12| Human DNA sequence from clone RP1-151F17 on chromosome 6 Contains the
             3' end of the SCA1 gene for spinocerebellar ataxia
             1n(olivopontocerebellar ataxia 1, autosomal dominant,
             ataxin 1), complete sequence
          Length = 113802

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 305   gatttcctctcctgcactcc 324
             ||||||||||||||||||||
Sbjct: 78559 gatttcctctcctgcactcc 78540

>emb|CR383661.10| Zebrafish DNA sequence from clone DKEY-44L21 in linkage group 20
            Contains the gene for a novel protein similar to mouse
            and human O-acyltransferase (membrane bound) domain
            containing 2 (OACT2), the 5' end of the gene for a novel
            protein similar to rat kinase D-interacting substance of
            220 kDa (RGD:619949) and a CpG island, complete sequence
          Length = 116874

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 259  actttcagttagcaagcctg 278
            ||||||||||||||||||||
Sbjct: 2328 actttcagttagcaagcctg 2309

>gb|AC104658.6| Homo sapiens BAC clone RP11-593M6 from 4, complete sequence
          Length = 140028

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 190   tcttttggaaaataaactgt 209
             ||||||||||||||||||||
Sbjct: 49631 tcttttggaaaataaactgt 49612

>gb|AC091784.8| Genomic sequence for Mus musculus, clone RP23-213D23, complete sequence
          Length = 215410

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 185   atgtatcttttggaaaataa 204
             ||||||||||||||||||||
Sbjct: 55289 atgtatcttttggaaaataa 55308

>emb|BX005480.12| Mouse DNA sequence from clone RP23-142M12 on chromosome X, complete
             sequence
          Length = 196326

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 185   atgtatcttttggaaaataa 204
             ||||||||||||||||||||
Sbjct: 21830 atgtatcttttggaaaataa 21811

>dbj|AB056170.1| Uncultured rumen bacterium gene for 16S ribosomal RNA, clone:9(ER)
          Length = 671

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 307 tttcctctcctgcactccggcatg 330
           |||||||||||||||||| |||||
Sbjct: 575 tttcctctcctgcactccagcatg 552

>gb|AC154543.2| Mus musculus BAC clone RP23-228E21 from 12, complete sequence
          Length = 197876

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 194   ttggaaaataaactgtgcattcat 217
             |||||||||||| |||||||||||
Sbjct: 45389 ttggaaaataaaatgtgcattcat 45366

>emb|CT010578.16| Mouse DNA sequence from clone RP23-268O1 on chromosome 12, complete
             sequence
          Length = 180650

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 194   ttggaaaataaactgtgcattcat 217
             |||||||||||| |||||||||||
Sbjct: 51580 ttggaaaataaaatgtgcattcat 51557

>gb|AF027390.1|AF027390 Homo sapiens 7q telomere, complete sequence
          Length = 225432

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 186    tgtatcttttggaaaataaa 205
              ||||||||||||||||||||
Sbjct: 155550 tgtatcttttggaaaataaa 155569

>gb|AC002112.1|AC002112 Genomic sequence from Human 6, complete sequence
          Length = 115967

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 305   gatttcctctcctgcactcc 324
             ||||||||||||||||||||
Sbjct: 62644 gatttcctctcctgcactcc 62663

>emb|AL670544.7| Mouse DNA sequence from clone RP23-16G8 on chromosome X, complete
             sequence
          Length = 236946

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 188   tatcttttggaaaataaact 207
             ||||||||||||||||||||
Sbjct: 63152 tatcttttggaaaataaact 63171

>gb|AY552850.1| Meleagris gallopavo clone MNT-278 microsatellite sequence
          Length = 1348

 Score = 40.1 bits (20), Expect = 4.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 105 atgtgtcaactttctgaaat 124
           ||||||||||||||||||||
Sbjct: 629 atgtgtcaactttctgaaat 648


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,231,229
Number of Sequences: 3902068
Number of extensions: 3231229
Number of successful extensions: 65256
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65229
Number of HSP's gapped (non-prelim): 27
length of query: 333
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 311
effective length of database: 17,147,199,772
effective search space: 5332779129092
effective search space used: 5332779129092
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)