ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart41f08
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_467897.1| Oryza sativa (japonica cultivar-group), mRNA 222 9e-55
2dbj|AK107898.1| Oryza sativa (japonica cultivar-group) cDNA clon... 222 9e-55
3dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 192 8e-46
4dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic D... 192 8e-46
5ref|XM_450954.1| Oryza sativa (japonica cultivar-group), mRNA 86 1e-13
6dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
7dbj|AP005574.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
8dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic D... 86 1e-13
9ref|XM_483016.1| Oryza sativa (japonica cultivar-group), mRNA 74 5e-10
10dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
11dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
12dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
13dbj|AK107626.1| Oryza sativa (japonica cultivar-group) cDNA clon... 74 5e-10
14dbj|AK058809.1| Oryza sativa (japonica cultivar-group) cDNA clon... 72 2e-09
15ref|NM_196160.1| Oryza sativa (japonica cultivar-group) putative... 64 5e-07
16gb|AC079935.3| Genomic sequence for Oryza sativa (japonica culti... 64 5e-07
17dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 64 5e-07
18gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 64 5e-07
19ref|XM_467243.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.11
20gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete se... 46 0.11
21dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 46 0.11
22gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 46 0.11
23dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
24dbj|AK060695.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
25gb|AF038423.1|AF038423 Mycobacterium smegmatis NADH dehydrogenas... 46 0.11
26ref|NM_187670.1| Oryza sativa (japonica cultivar-group), predic... 44 0.44
27dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
28dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
29dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.44
30emb|AJ311547.1|VCA311547 Volvox carteri f. nagariensis mRNA for ... 44 0.44
31dbj|AK107555.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.44
32dbj|AB070345.1| Volvox carteri f. nagariensis s9 mRNA for matrix... 44 0.44
33gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 42 1.7
34gb|AC154387.2| Mus musculus BAC clone RP23-10K1 from chromosome ... 42 1.7
35gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 42 1.7
36ref|XM_592662.2| PREDICTED: Bos taurus similar to Down syndrome ... 42 1.7
37gb|AY366203.1| Synthetic construct immunoglobulin single chain v... 42 1.7
38ref|XM_742746.1| Aspergillus fumigatus Af293 ubiquitin C-termina... 42 1.7
39gb|AE012490.1| Xanthomonas campestris pv. campestris str. ATCC 3... 42 1.7
40dbj|AK141963.1| Mus musculus 12 days embryo spinal ganglion cDNA... 42 1.7
41dbj|AK134979.1| Mus musculus adult male olfactory brain cDNA, RI... 42 1.7
42gb|AF315558.1| Mus musculus Down syndrome cell adhesion molecule... 42 1.7
43gb|CP000249.1| Frankia sp. CcI3, complete genome 42 1.7
44gb|AY005483.1| Mus musculus Down syndrome cell adhesion molecule... 42 1.7
45gb|AC154538.2| Mus musculus BAC clone RP23-451M23 from chromosom... 42 1.7
46gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, ... 42 1.7
47dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.7
48dbj|AK119939.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.7
49ref|NM_031174.2| Mus musculus Down syndrome cell adhesion molecu... 42 1.7
50dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, comp... 42 1.7
51gb|AC162384.6| Mus musculus 10 BAC RP24-292K6 (Roswell Park Canc... 40 6.8
52gb|AY166659.1| Oryza sativa (indica cultivar-group) pollen aller... 40 6.8
53gb|AF220610.1| Oryza sativa pollen allergen mRNA, complete cds 40 6.8
54ref|XM_475210.1| Oryza sativa (japonica cultivar-group), predic... 40 6.8
55ref|XM_470974.1| Oryza sativa (japonica cultivar-group), predic... 40 6.8
56ref|NM_197637.1| Oryza sativa (japonica cultivar-group) beta-exp... 40 6.8
57ref|NM_196686.1| Oryza sativa (japonica cultivar-group) putative... 40 6.8
58ref|NM_193466.1| Oryza sativa (japonica cultivar-group), predic... 40 6.8
59ref|XM_473856.1| Oryza sativa (japonica cultivar-group), predic... 40 6.8
60gb|AC137609.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
61gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, co... 40 6.8
62gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, compl... 40 6.8
63gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
64gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 6.8
65ref|XM_959897.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.8
66ref|XM_330566.1| Neurospora crassa OR74A hypothetical protein (N... 40 6.8
67gb|AC105319.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
68gb|AF261277.1| Oryza sativa beta-expansin (EXPB9) mRNA, complete... 40 6.8
69gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 6.8
70gb|AY460177.1| Gallus gallus R-Ras3 mRNA, complete cds 40 6.8
71ref|XM_784653.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 6.8
72emb|X89226.1|OSLRK2GEN O.sativa DNA for LRK2 gene 40 6.8
73emb|BX842637.1| Neurospora crassa DNA linkage group I cosmid con... 40 6.8
74emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete ... 40 6.8
75emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete ... 40 6.8
76emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4,... 40 6.8
77emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4,... 40 6.8
78emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4,... 40 6.8
79emb|AJ133638.1|ASA133638 Avena sativa mRNA for myb protein 40 6.8
80gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 6.8
81ref|NM_204489.1| Gallus gallus muscle RAS oncogene homolog (MRAS... 40 6.8
82gb|AY119506.1| Drosophila melanogaster GH12423 full insert cDNA 40 6.8
83gb|AC009384.7| Drosophila melanogaster 3L BAC RP98-10L1 (Roswell... 40 6.8
84gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8
85ref|NM_140917.1| Drosophila melanogaster CG14186-RA (CG14186), mRNA 40 6.8
86gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 geno... 40 6.8
87gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic ... 40 6.8
88gb|AC009383.8| Drosophila melanogaster 3L BAC RP98-31C3 (Roswell... 40 6.8
89gb|AC162310.7| Mus musculus 10 BAC RP24-225K5 (Roswell Park Canc... 40 6.8
90gb|AC157021.6| Mus musculus 10 BAC RP24-328K10 (Roswell Park Can... 40 6.8
91gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete g... 40 6.8
92dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
93dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
94dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
95dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
96dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
97dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome 40 6.8
98dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
99dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
100ref|XM_341829.2| PREDICTED: Rattus norvegicus similar to Trithor... 40 6.8
101dbj|AB182389.1| Oryza sativa (japonica cultivar-group) FON1 gene... 40 6.8
102dbj|AB182388.1| Oryza sativa (japonica cultivar-group) FON1 mRNA... 40 6.8
103dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, comp... 40 6.8
104dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.8
105dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
106dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
107dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.8
108dbj|AK111824.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
109dbj|AK105614.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
110dbj|AK101957.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
111dbj|AK101882.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
112dbj|AK099112.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
113dbj|AK073594.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
114dbj|AK070187.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
115dbj|AK069344.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
116dbj|AK063936.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
117dbj|AK060144.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.8
118gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71... 40 6.8
119gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 40 6.8
120gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 6.8
121emb|AL662992.3|OSJN00193 Oryza sativa genomic DNA, chromosome 4,... 40 6.8
122dbj|AB090309.1| Thermococcus kodakaraensis LeuRS gene for leucyl... 40 6.8
123gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome... 40 6.8 
>ref|XM_467897.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 713

 Score =  222 bits (112), Expect = 9e-55
 Identities = 196/224 (87%)
 Strand = Plus / Minus

                                                                       
Query: 265 gcgatctcctccaccgacgacagccggcactcgtcctccatcctgaggctgaaggagtag 324
           |||||||| || || ||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 408 gcgatctcgtcgactgacgaaagccggcattcatcctccatcttgaggctgaaggagtag 349

                                                                       
Query: 325 aagaccagctggtcggcggtggcggtggcgttcgggtggagcacggtgagcccgaggcac 384
           |   |||  ||||||||||||| |||| ||||  |||||||||||||||| |||||||| 
Sbjct: 348 agcgccaaatggtcggcggtggtggtgacgttgaggtggagcacggtgaggccgaggcat 289

                                                                       
Query: 385 tgcatcgccaccaccatcctcgccagctgcctcggccgccgcggcgccagcaccttcacg 444
           |||| ||||||||||||||||  |||||||||||||||||||||||| |||||| |||||
Sbjct: 288 tgcagcgccaccaccatcctcagcagctgcctcggccgccgcggcgcgagcaccctcacg 229

                                                       
Query: 445 ctcgcgtggctctccgccagggccacctccacgtcggccacgcc 488
            |||||||||||||||||| ||||||||| | ||||||| ||||
Sbjct: 228 ttcgcgtggctctccgccatggccacctcgatgtcggccgcgcc 185
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>dbj|AK107898.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-134-F05, full
           insert sequence
          Length = 713

 Score =  222 bits (112), Expect = 9e-55
 Identities = 196/224 (87%)
 Strand = Plus / Minus

                                                                       
Query: 265 gcgatctcctccaccgacgacagccggcactcgtcctccatcctgaggctgaaggagtag 324
           |||||||| || || ||||| |||||||| || ||||||||| |||||||||||||||||
Sbjct: 408 gcgatctcgtcgactgacgaaagccggcattcatcctccatcttgaggctgaaggagtag 349

                                                                       
Query: 325 aagaccagctggtcggcggtggcggtggcgttcgggtggagcacggtgagcccgaggcac 384
           |   |||  ||||||||||||| |||| ||||  |||||||||||||||| |||||||| 
Sbjct: 348 agcgccaaatggtcggcggtggtggtgacgttgaggtggagcacggtgaggccgaggcat 289

                                                                       
Query: 385 tgcatcgccaccaccatcctcgccagctgcctcggccgccgcggcgccagcaccttcacg 444
           |||| ||||||||||||||||  |||||||||||||||||||||||| |||||| |||||
Sbjct: 288 tgcagcgccaccaccatcctcagcagctgcctcggccgccgcggcgcgagcaccctcacg 229

                                                       
Query: 445 ctcgcgtggctctccgccagggccacctccacgtcggccacgcc 488
            |||||||||||||||||| ||||||||| | ||||||| ||||
Sbjct: 228 ttcgcgtggctctccgccatggccacctcgatgtcggccgcgcc 185
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  192 bits (97), Expect = 8e-46
 Identities = 160/181 (88%)
 Strand = Plus / Plus

                                                                            
Query: 308      tgaggctgaaggagtagaagaccagctggtcggcggtggcggtggcgttcgggtggagca 367
                ||||||||||||||||||   |||  ||||||||||||| |||| ||||  |||||||||
Sbjct: 31978080 tgaggctgaaggagtagagcgccaaatggtcggcggtggtggtgacgttgaggtggagca 31978139

                                                                            
Query: 368      cggtgagcccgaggcactgcatcgccaccaccatcctcgccagctgcctcggccgccgcg 427
                ||||||| |||||||| |||| ||||||||||||||||  ||||||||||||||||||||
Sbjct: 31978140 cggtgaggccgaggcattgcagcgccaccaccatcctcagcagctgcctcggccgccgcg 31978199

                                                                            
Query: 428      gcgccagcaccttcacgctcgcgtggctctccgccagggccacctccacgtcggccacgc 487
                |||| |||||| ||||| |||||||||||||||||| ||||||||| | ||||||| |||
Sbjct: 31978200 gcgcgagcaccctcacgttcgcgtggctctccgccatggccacctcgatgtcggccgcgc 31978259

                 
Query: 488      c 488
                |
Sbjct: 31978260 c 31978260



 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 250      tggtgcaccgccgccgcgatctcctccaccg 280
                |||||||||||||||||||| || |||||||
Sbjct: 28411267 tggtgcaccgccgccgcgatgtcgtccaccg 28411237



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 255     caccgccgccgcgatctcctc 275
               |||||||||||||||||||||
Sbjct: 8075238 caccgccgccgcgatctcctc 8075258
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>dbj|AP004814.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
              clone:P0471A11
          Length = 157740

 Score =  192 bits (97), Expect = 8e-46
 Identities = 160/181 (88%)
 Strand = Plus / Plus

                                                                          
Query: 308    tgaggctgaaggagtagaagaccagctggtcggcggtggcggtggcgttcgggtggagca 367
              ||||||||||||||||||   |||  ||||||||||||| |||| ||||  |||||||||
Sbjct: 139081 tgaggctgaaggagtagagcgccaaatggtcggcggtggtggtgacgttgaggtggagca 139140

                                                                          
Query: 368    cggtgagcccgaggcactgcatcgccaccaccatcctcgccagctgcctcggccgccgcg 427
              ||||||| |||||||| |||| ||||||||||||||||  ||||||||||||||||||||
Sbjct: 139141 cggtgaggccgaggcattgcagcgccaccaccatcctcagcagctgcctcggccgccgcg 139200

                                                                          
Query: 428    gcgccagcaccttcacgctcgcgtggctctccgccagggccacctccacgtcggccacgc 487
              |||| |||||| ||||| |||||||||||||||||| ||||||||| | ||||||| |||
Sbjct: 139201 gcgcgagcaccctcacgttcgcgtggctctccgccatggccacctcgatgtcggccgcgc 139260

               
Query: 488    c 488
              |
Sbjct: 139261 c 139261
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>ref|XM_450954.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1056

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 106/127 (83%)
 Strand = Plus / Minus

                                                                       
Query: 359 ggtggagcacggtgagcccgaggcactgcatcgccaccaccatcctcgccagctgcctcg 418
           |||||||||||||||||| | ||| ||||| ||||||||||| ||    |||||||||||
Sbjct: 904 ggtggagcacggtgagccggtggccctgcagcgccaccaccagccggagcagctgcctcg 845

                                                                       
Query: 419 gccgccgcggcgccagcaccttcacgctcgcgtggctctccgccagggccacctccacgt 478
           |||||||| | | |||||||  || | | |||||||||||| ||| || |||||| ||||
Sbjct: 844 gccgccgccgtgacagcacccgcaggttggcgtggctctccaccatggtcacctcgacgt 785

                  
Query: 479 cggccac 485
           |||||||
Sbjct: 784 cggccac 778
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 106/127 (83%)
 Strand = Plus / Minus

                                                                            
Query: 359      ggtggagcacggtgagcccgaggcactgcatcgccaccaccatcctcgccagctgcctcg 418
                |||||||||||||||||| | ||| ||||| ||||||||||| ||    |||||||||||
Sbjct: 17773137 ggtggagcacggtgagccggtggccctgcagcgccaccaccagccggagcagctgcctcg 17773078

                                                                            
Query: 419      gccgccgcggcgccagcaccttcacgctcgcgtggctctccgccagggccacctccacgt 478
                |||||||| | | |||||||  || | | |||||||||||| ||| || |||||| ||||
Sbjct: 17773077 gccgccgccgtgacagcacccgcaggttggcgtggctctccaccatggtcacctcgacgt 17773018

                       
Query: 479      cggccac 485
                |||||||
Sbjct: 17773017 cggccac 17773011
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>dbj|AP005574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1595_D08
          Length = 116351

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 106/127 (83%)
 Strand = Plus / Minus

                                                                         
Query: 359   ggtggagcacggtgagcccgaggcactgcatcgccaccaccatcctcgccagctgcctcg 418
             |||||||||||||||||| | ||| ||||| ||||||||||| ||    |||||||||||
Sbjct: 13781 ggtggagcacggtgagccggtggccctgcagcgccaccaccagccggagcagctgcctcg 13722

                                                                         
Query: 419   gccgccgcggcgccagcaccttcacgctcgcgtggctctccgccagggccacctccacgt 478
             |||||||| | | |||||||  || | | |||||||||||| ||| || |||||| ||||
Sbjct: 13721 gccgccgccgtgacagcacccgcaggttggcgtggctctccaccatggtcacctcgacgt 13662

                    
Query: 479   cggccac 485
             |||||||
Sbjct: 13661 cggccac 13655
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>dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0676H02
          Length = 144252

 Score = 85.7 bits (43), Expect = 1e-13
 Identities = 106/127 (83%)
 Strand = Plus / Minus

                                                                         
Query: 359   ggtggagcacggtgagcccgaggcactgcatcgccaccaccatcctcgccagctgcctcg 418
             |||||||||||||||||| | ||| ||||| ||||||||||| ||    |||||||||||
Sbjct: 81771 ggtggagcacggtgagccggtggccctgcagcgccaccaccagccggagcagctgcctcg 81712

                                                                         
Query: 419   gccgccgcggcgccagcaccttcacgctcgcgtggctctccgccagggccacctccacgt 478
             |||||||| | | |||||||  || | | |||||||||||| ||| || |||||| ||||
Sbjct: 81711 gccgccgccgtgacagcacccgcaggttggcgtggctctccaccatggtcacctcgacgt 81652

                    
Query: 479   cggccac 485
             |||||||
Sbjct: 81651 cggccac 81645
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>ref|XM_483016.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1413

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 395  ccaccatcctcgccagctgcctcggccgccgcggcgccagcaccttcacgctcgcgtggc 454
            |||||||||||  ||||||||||||||||||| ||| ||||||||||| | | |||||||
Sbjct: 1007 ccaccatcctcagcagctgcctcggccgccgccgcgacagcaccttcaggttggcgtggc 948

                 
Query: 455  tctcc 459
            |||||
Sbjct: 947  tctcc 943



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 256  accgccgccgcgatctcctccaccgacg 283
            |||||||||||||| || ||||||||||
Sbjct: 1143 accgccgccgcgatgtcgtccaccgacg 1116
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                            
Query: 395      ccaccatcctcgccagctgcctcggccgccgcggcgccagcaccttcacgctcgcgtggc 454
                |||||||||||  ||||||||||||||||||| ||| ||||||||||| | | |||||||
Sbjct: 23888175 ccaccatcctcagcagctgcctcggccgccgccgcgacagcaccttcaggttggcgtggc 23888234

                     
Query: 455      tctcc 459
                |||||
Sbjct: 23888235 tctcc 23888239



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 256      accgccgccgcgatctcctccaccgacg 283
                |||||||||||||| || ||||||||||
Sbjct: 23887630 accgccgccgcgatgtcgtccaccgacg 23887657
to top
>dbj|AP004213.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1111_H02
          Length = 108603

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                         
Query: 395   ccaccatcctcgccagctgcctcggccgccgcggcgccagcaccttcacgctcgcgtggc 454
             |||||||||||  ||||||||||||||||||| ||| ||||||||||| | | |||||||
Sbjct: 79879 ccaccatcctcagcagctgcctcggccgccgccgcgacagcaccttcaggttggcgtggc 79938

                  
Query: 455   tctcc 459
             |||||
Sbjct: 79939 tctcc 79943



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 256   accgccgccgcgatctcctccaccgacg 283
             |||||||||||||| || ||||||||||
Sbjct: 79334 accgccgccgcgatgtcgtccaccgacg 79361
to top
>dbj|AP005918.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0419H09
          Length = 143533

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Plus

                                                                         
Query: 395   ccaccatcctcgccagctgcctcggccgccgcggcgccagcaccttcacgctcgcgtggc 454
             |||||||||||  ||||||||||||||||||| ||| ||||||||||| | | |||||||
Sbjct: 21326 ccaccatcctcagcagctgcctcggccgccgccgcgacagcaccttcaggttggcgtggc 21385

                  
Query: 455   tctcc 459
             |||||
Sbjct: 21386 tctcc 21390



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 256   accgccgccgcgatctcctccaccgacg 283
             |||||||||||||| || ||||||||||
Sbjct: 20781 accgccgccgcgatgtcgtccaccgacg 20808
to top
>dbj|AK107626.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-D10, full
            insert sequence
          Length = 1413

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 58/65 (89%)
 Strand = Plus / Minus

                                                                        
Query: 395  ccaccatcctcgccagctgcctcggccgccgcggcgccagcaccttcacgctcgcgtggc 454
            |||||||||||  ||||||||||||||||||| ||| ||||||||||| | | |||||||
Sbjct: 1007 ccaccatcctcagcagctgcctcggccgccgccgcgacagcaccttcaggttggcgtggc 948

                 
Query: 455  tctcc 459
            |||||
Sbjct: 947  tctcc 943



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 256  accgccgccgcgatctcctccaccgacg 283
            |||||||||||||| || ||||||||||
Sbjct: 1143 accgccgccgcgatgtcgtccaccgacg 1116
to top
>dbj|AK058809.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-003-C09, full
           insert sequence
          Length = 1343

 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 48/52 (92%)
 Strand = Plus / Minus

                                                               
Query: 408 cagctgcctcggccgccgcggcgccagcaccttcacgctcgcgtggctctcc 459
           ||||||||||||||||||| ||||| ||||||| ||||| ||||||||||||
Sbjct: 928 cagctgcctcggccgccgccgcgcctgcaccttgacgctggcgtggctctcc 877
to top
>ref|NM_196160.1| Oryza sativa (japonica cultivar-group) putative helix-loop-helix
           DNA-binding protein (OSJNBa0095C06.11), mRNA
          Length = 987

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                               
Query: 408 cagctgcctcggccgccgcggcgccagcaccttcacgctcgcgtggctctcc 459
           ||||||||||||||||||| ||||| ||||||| ||||| ||||||| ||||
Sbjct: 774 cagctgcctcggccgccgccgcgcctgcaccttgacgctggcgtggccctcc 723
to top
>gb|AC079935.3| Genomic sequence for Oryza sativa (japonica cultivar-group) cultivar
             Nipponbare clone OSJNBa0095C06, from Chromosome 10,
             complete sequence
          Length = 156159

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                 
Query: 408   cagctgcctcggccgccgcggcgccagcaccttcacgctcgcgtggctctcc 459
             ||||||||||||||||||| ||||| ||||||| ||||| ||||||| ||||
Sbjct: 85277 cagctgcctcggccgccgccgcgcctgcaccttgacgctggcgtggccctcc 85226
to top
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                    
Query: 408      cagctgcctcggccgccgcggcgccagcaccttcacgctcgcgtggctctcc 459
                ||||||||||||||||||| ||||| ||||||| ||||| ||||||| ||||
Sbjct: 11501284 cagctgcctcggccgccgccgcgcctgcaccttgacgctggcgtggccctcc 11501233



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 449      cgtggctctccgccagggccacct 472
                |||||||| |||||||||||||||
Sbjct: 20946023 cgtggctccccgccagggccacct 20946046



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 419      gccgccgcggcgccagcacc 438
                ||||||||||||||||||||
Sbjct: 15238815 gccgccgcggcgccagcacc 15238796
to top
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 63.9 bits (32), Expect = 5e-07
 Identities = 47/52 (90%)
 Strand = Plus / Minus

                                                                    
Query: 408      cagctgcctcggccgccgcggcgccagcaccttcacgctcgcgtggctctcc 459
                ||||||||||||||||||| ||||| ||||||| ||||| ||||||| ||||
Sbjct: 11507724 cagctgcctcggccgccgccgcgcctgcaccttgacgctggcgtggccctcc 11507673



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 449      cgtggctctccgccagggccacct 472
                |||||||| |||||||||||||||
Sbjct: 20957287 cgtggctccccgccagggccacct 20957310



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 419      gccgccgcggcgccagcacc 438
                ||||||||||||||||||||
Sbjct: 15247056 gccgccgcggcgccagcacc 15247037
to top
>ref|XM_467243.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1566

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 250  tggtgcaccgccgccgcgatctcctccaccg 280
            |||||||||||||||||||| || |||||||
Sbjct: 1092 tggtgcaccgccgccgcgatgtcgtccaccg 1062
to top
>gb|AY368673.1| Triticum turgidum HMW-glutenin locus, complete sequence
          Length = 285506

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 340    gcggtggcggtggcgttcgggtg 362
              |||||||||||||||||||||||
Sbjct: 247757 gcggtggcggtggcgttcgggtg 247779
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 261     cgccgcgatctcctccaccgacg 283
               |||||||||||||||||||||||
Sbjct: 4419647 cgccgcgatctcctccaccgacg 4419625
to top
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 258     cgccgccgcgatctcctccaccg 280
               |||||||||||||||||||||||
Sbjct: 1076896 cgccgccgcgatctcctccaccg 1076918



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 255     caccgccgccgcgatctcctccacc 279
               |||||||||||||||||| ||||||
Sbjct: 2390619 caccgccgccgcgatctcgtccacc 2390595
to top
>dbj|AP004118.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1148_D05
          Length = 155146

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 250   tggtgcaccgccgccgcgatctcctccaccg 280
             |||||||||||||||||||| || |||||||
Sbjct: 35388 tggtgcaccgccgccgcgatgtcgtccaccg 35358
to top
>dbj|AK060695.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-030-D07, full
            insert sequence
          Length = 1566

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                           
Query: 250  tggtgcaccgccgccgcgatctcctccaccg 280
            |||||||||||||||||||| || |||||||
Sbjct: 1092 tggtgcaccgccgccgcgatgtcgtccaccg 1062
to top
>gb|AF038423.1|AF038423 Mycobacterium smegmatis NADH dehydrogenase (ndh) gene, complete cds
          Length = 1376

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                   
Query: 253  tgcaccgccgccgcgatctcctc 275
            |||||||||||||||||||||||
Sbjct: 1349 tgcaccgccgccgcgatctcctc 1327
to top
>ref|NM_187670.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 990

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 298 tcctccatcctgaggctgaaggagtagaagacca 331
           ||||||| | |||||||||||||||||| |||||
Sbjct: 893 tcctccaccttgaggctgaaggagtagaggacca 860
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 387      catcgccaccaccatcctcgcc 408
                ||||||||||||||||||||||
Sbjct: 27733335 catcgccaccaccatcctcgcc 27733314
to top
>dbj|AP004378.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0496C02
          Length = 148419

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 387   catcgccaccaccatcctcgcc 408
             ||||||||||||||||||||||
Sbjct: 25714 catcgccaccaccatcctcgcc 25693
to top
>dbj|AP003833.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
              clone:OJ1477_F01
          Length = 158792

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 387    catcgccaccaccatcctcgcc 408
              ||||||||||||||||||||||
Sbjct: 112437 catcgccaccaccatcctcgcc 112416
to top
>emb|AJ311547.1|VCA311547 Volvox carteri f. nagariensis mRNA for metalloproteinase (VMP1
            protein)
          Length = 1722

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 333  ctggtcggcggtggcggtggcg 354
            ||||||||||||||||||||||
Sbjct: 1595 ctggtcggcggtggcggtggcg 1574
to top
>dbj|AK107555.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-130-B03, full
           insert sequence
          Length = 1312

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 298 tcctccatcctgaggctgaaggagtagaagacca 331
           ||||||| | |||||||||||||||||| |||||
Sbjct: 998 tcctccaccttgaggctgaaggagtagaggacca 965
to top
>dbj|AB070345.1| Volvox carteri f. nagariensis s9 mRNA for matrix metalloproteinase,
            complete cds
          Length = 3590

 Score = 44.1 bits (22), Expect = 0.44
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 333  ctggtcggcggtggcggtggcg 354
            ||||||||||||||||||||||
Sbjct: 1828 ctggtcggcggtggcggtggcg 1807
to top
>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 254     gcaccgccgccgcgatctcctccac 278
               |||||||| ||||||||||||||||
Sbjct: 3841617 gcaccgcccccgcgatctcctccac 3841641
to top
>gb|AC154387.2| Mus musculus BAC clone RP23-10K1 from chromosome 16, complete sequence
          Length = 212628

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 292   cactcgtcctccatcctgagg 312
             |||||||||||||||||||||
Sbjct: 30554 cactcgtcctccatcctgagg 30534
to top
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 405     cgccagctgcctcggccgccgcggcgcca 433
               ||||||| |||||||||||| ||||||||
Sbjct: 1795059 cgccagccgcctcggccgcctcggcgcca 1795087
to top
>ref|XM_592662.2| PREDICTED: Bos taurus similar to Down syndrome cell adhesion molecule
            precursor (CHD2) (LOC514757), partial mRNA
          Length = 4033

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 292  cactcgtcctccatcctgagg 312
            |||||||||||||||||||||
Sbjct: 3296 cactcgtcctccatcctgagg 3276
to top
>gb|AY366203.1| Synthetic construct immunoglobulin single chain variable fragment
           C29 mRNA, partial cds
          Length = 768

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 456 ctccgccagggccacctccac 476
           |||||||||||||||||||||
Sbjct: 367 ctccgccagggccacctccac 347
to top
>ref|XM_742746.1| Aspergillus fumigatus Af293 ubiquitin C-terminal hydrolase
           (Afu6g02380) partial mRNA
          Length = 1716

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 401 tcctcgccagctgcctcggccgccg 425
           |||||||||||||||| ||||||||
Sbjct: 821 tcctcgccagctgccttggccgccg 797
to top
>gb|AE012490.1| Xanthomonas campestris pv. campestris str. ATCC 33913,  section 398
            of 460 of the complete genome
          Length = 11621

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                         
Query: 417  cggccgccgcggcgccagcaccttcacgc 445
            |||| |||||||||||||||||| |||||
Sbjct: 9458 cggcagccgcggcgccagcacctgcacgc 9430
to top
>dbj|AK141963.1| Mus musculus 12 days embryo spinal ganglion cDNA, RIKEN full-length
            enriched library, clone:D130076C02 product:Down syndrome
            cell adhesion molecule, full insert sequence
          Length = 3697

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 292  cactcgtcctccatcctgagg 312
            |||||||||||||||||||||
Sbjct: 3178 cactcgtcctccatcctgagg 3158
to top
>dbj|AK134979.1| Mus musculus adult male olfactory brain cDNA, RIKEN full-length
           enriched library, clone:6430536D06 product:Down syndrome
           cell adhesion molecule, full insert sequence
          Length = 1739

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 292 cactcgtcctccatcctgagg 312
           |||||||||||||||||||||
Sbjct: 664 cactcgtcctccatcctgagg 644
to top
>gb|AF315558.1| Mus musculus Down syndrome cell adhesion molecule (Dscam) mRNA,
            complete cds
          Length = 6267

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 292  cactcgtcctccatcctgagg 312
            |||||||||||||||||||||
Sbjct: 5756 cactcgtcctccatcctgagg 5736
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 262     gccgcgatctcctccaccgac 282
               |||||||||||||||||||||
Sbjct: 5037871 gccgcgatctcctccaccgac 5037851



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 262     gccgcgatctcctccaccgac 282
               |||||||||||||||||||||
Sbjct: 5035848 gccgcgatctcctccaccgac 5035868



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 262     gccgcgatctcctccaccgac 282
               |||||||||||||||||||||
Sbjct: 4919081 gccgcgatctcctccaccgac 4919061



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 262     gccgcgatctcctccaccgac 282
               |||||||||||||||||||||
Sbjct: 3925457 gccgcgatctcctccaccgac 3925477



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 262     gccgcgatctcctccaccgac 282
               |||||||||||||||||||||
Sbjct: 3474455 gccgcgatctcctccaccgac 3474435



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 262     gccgcgatctcctccaccgac 282
               |||||||||||||||||||||
Sbjct: 3297676 gccgcgatctcctccaccgac 3297696



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 262     gccgcgatctcctccaccgac 282
               |||||||||||||||||||||
Sbjct: 3188269 gccgcgatctcctccaccgac 3188249



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 262     gccgcgatctcctccaccgac 282
               |||||||||||||||||||||
Sbjct: 2926872 gccgcgatctcctccaccgac 2926892



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 262     gccgcgatctcctccaccgac 282
               |||||||||||||||||||||
Sbjct: 2706717 gccgcgatctcctccaccgac 2706697



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 262     gccgcgatctcctccaccgac 282
               |||||||||||||||||||||
Sbjct: 2417034 gccgcgatctcctccaccgac 2417014



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 262     gccgcgatctcctccaccgac 282
               |||||||||||||||||||||
Sbjct: 2303694 gccgcgatctcctccaccgac 2303674



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 262     gccgcgatctcctccaccgac 282
               |||||||||||||||||||||
Sbjct: 2113650 gccgcgatctcctccaccgac 2113670



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 262     gccgcgatctcctccaccgac 282
               |||||||||||||||||||||
Sbjct: 1422577 gccgcgatctcctccaccgac 1422597



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 262    gccgcgatctcctccaccgac 282
              |||||||||||||||||||||
Sbjct: 767406 gccgcgatctcctccaccgac 767386



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 262    gccgcgatctcctccaccgac 282
              |||||||||||||||||||||
Sbjct: 349408 gccgcgatctcctccaccgac 349428
to top
>gb|AY005483.1| Mus musculus Down syndrome cell adhesion molecule (Dscam) mRNA,
            complete cds
          Length = 6829

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 292  cactcgtcctccatcctgagg 312
            |||||||||||||||||||||
Sbjct: 6111 cactcgtcctccatcctgagg 6091
to top
>gb|AC154538.2| Mus musculus BAC clone RP23-451M23 from chromosome 16, complete sequence
          Length = 176390

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 292    cactcgtcctccatcctgagg 312
              |||||||||||||||||||||
Sbjct: 171158 cactcgtcctccatcctgagg 171138
to top
>gb|CP000050.1| Xanthomonas campestris pv. campestris str. 8004, complete genome
          Length = 5148708

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 417     cggccgccgcggcgccagcaccttcacgc 445
               |||| |||||||||||||||||| |||||
Sbjct: 4458386 cggcagccgcggcgccagcacctgcacgc 4458358
to top
>dbj|AP005004.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0503B05
          Length = 156814

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 255   caccgccgccgcgatctcctc 275
             |||||||||||||||||||||
Sbjct: 63431 caccgccgccgcgatctcctc 63451
to top
>dbj|AK119939.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-B05, full
           insert sequence
          Length = 1154

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 415 ctcggccgccgcggcgccagc 435
           |||||||||||||||||||||
Sbjct: 221 ctcggccgccgcggcgccagc 241
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>ref|NM_031174.2| Mus musculus Down syndrome cell adhesion molecule (Dscam), mRNA
          Length = 6829

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 292  cactcgtcctccatcctgagg 312
            |||||||||||||||||||||
Sbjct: 6111 cactcgtcctccatcctgagg 6091
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>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome
          Length = 3566135

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                            
Query: 458     ccgccagggccacctccacgtcggccacg 486
               ||||||||||| |||||||||||| ||||
Sbjct: 1749070 ccgccagggcctcctccacgtcggtcacg 1749042
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>gb|AC162384.6| Mus musculus 10 BAC RP24-292K6 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 172853

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 307    ctgaggctgaaggagtagaa 326
              ||||||||||||||||||||
Sbjct: 121845 ctgaggctgaaggagtagaa 121826
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>gb|AY166659.1| Oryza sativa (indica cultivar-group) pollen allergen (OSIPA) gene,
            partial cds
          Length = 2411

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 449  cgtggctctccgccagggccacct 472
            |||||||| |||||||||||||||
Sbjct: 2013 cgtggctccccgccagggccacct 2036
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>gb|AF220610.1| Oryza sativa pollen allergen mRNA, complete cds
          Length = 1106

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 449 cgtggctctccgccagggccacct 472
           |||||||| |||||||||||||||
Sbjct: 161 cgtggctccccgccagggccacct 184
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>ref|XM_475210.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1002

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 257 ccgccgccgcgatctcctcc 276
           ||||||||||||||||||||
Sbjct: 14  ccgccgccgcgatctcctcc 33
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>ref|XM_470974.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 990

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 335 ggtcggcggtggcggtggcg 354
           ||||||||||||||||||||
Sbjct: 296 ggtcggcggtggcggtggcg 315
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>ref|NM_197637.1| Oryza sativa (japonica cultivar-group) beta-expansin
           (OSJNBa0082M15.4), mRNA
          Length = 1148

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 449 cgtggctctccgccagggccacct 472
           |||||||| |||||||||||||||
Sbjct: 176 cgtggctccccgccagggccacct 199
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>ref|NM_196686.1| Oryza sativa (japonica cultivar-group) putative expansin
           (OSJNBb0016G17.15), mRNA
          Length = 759

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 419 gccgccgcggcgccagcacc 438
           ||||||||||||||||||||
Sbjct: 471 gccgccgcggcgccagcacc 452
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>ref|NM_193466.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1143

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 255 caccgccgccgcgatctcct 274
           ||||||||||||||||||||
Sbjct: 171 caccgccgccgcgatctcct 152
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>ref|XM_473856.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1992

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 423 ccgcggcgccagcaccttcacgct 446
           |||||||| |||||||||||||||
Sbjct: 114 ccgcggcgacagcaccttcacgct 91
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>gb|AC137609.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0010H19, complete sequence
          Length = 162902

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 473   ccacgtcggccacgccccgc 492
             ||||||||||||||||||||
Sbjct: 52629 ccacgtcggccacgccccgc 52610
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>gb|AE001274.2| Leishmania major strain Friedlin chromosome 1, complete sequence
          Length = 268984

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 335    ggtcggcggtggcggtggcg 354
              ||||||||||||||||||||
Sbjct: 115848 ggtcggcggtggcggtggcg 115829
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>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome
          Length = 943016

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 413    gcctcggccgccgcggcgcc 432
              ||||||||||||||||||||
Sbjct: 253082 gcctcggccgccgcggcgcc 253063
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>gb|AC114983.6| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0032H19
             map E30331S, complete sequence
          Length = 164820

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 414   cctcggccgccgcggcgccagcac 437
             |||| |||||||||||||||||||
Sbjct: 28562 cctccgccgccgcggcgccagcac 28585
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>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 413    gcctcggccgccgcggcgcc 432
              ||||||||||||||||||||
Sbjct: 905335 gcctcggccgccgcggcgcc 905354
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>ref|XM_959897.1| Neurospora crassa OR74A hypothetical protein (NCU03131.1) partial
           mRNA
          Length = 1173

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 390 cgccaccaccatcctcgcca 409
           ||||||||||||||||||||
Sbjct: 87  cgccaccaccatcctcgcca 106
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>ref|XM_330566.1| Neurospora crassa OR74A hypothetical protein (NCU03131.1) partial
           mRNA
          Length = 1173

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 390 cgccaccaccatcctcgcca 409
           ||||||||||||||||||||
Sbjct: 87  cgccaccaccatcctcgcca 106
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>gb|AC105319.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1657_H11,
             complete sequence
          Length = 98103

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 257   ccgccgccgcgatctcctcc 276
             ||||||||||||||||||||
Sbjct: 34464 ccgccgccgcgatctcctcc 34483
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>gb|AF261277.1| Oryza sativa beta-expansin (EXPB9) mRNA, complete cds
          Length = 1117

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 449 cgtggctctccgccagggccacct 472
           |||||||| |||||||||||||||
Sbjct: 176 cgtggctccccgccagggccacct 199
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 414      cctcggccgccgcggcgccagcac 437
                |||| |||||||||||||||||||
Sbjct: 17535181 cctccgccgccgcggcgccagcac 17535158



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 308     tgaggctgaaggagtagaagacca 331
               |||||||||||||||||| |||||
Sbjct: 4611689 tgaggctgaaggagtagaggacca 4611666
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>gb|AY460177.1| Gallus gallus R-Ras3 mRNA, complete cds
          Length = 979

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 484 acgccccgccgggccctgct 503
           ||||||||||||||||||||
Sbjct: 35  acgccccgccgggccctgct 54
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>ref|XM_784653.1| PREDICTED: Strongylocentrotus purpuratus similar to sodium-dependent
            organic anion transporter (LOC584804), mRNA
          Length = 1068

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 414  cctcggccgccgcggcgcca 433
            ||||||||||||||||||||
Sbjct: 1033 cctcggccgccgcggcgcca 1014
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>emb|X89226.1|OSLRK2GEN O.sativa DNA for LRK2 gene
          Length = 5555

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 338  cggcggtggcggtggcgttc 357
            ||||||||||||||||||||
Sbjct: 3086 cggcggtggcggtggcgttc 3105
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>emb|BX842637.1| Neurospora crassa DNA linkage group I cosmid contig 5C2
          Length = 98769

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 390   cgccaccaccatcctcgcca 409
             ||||||||||||||||||||
Sbjct: 66810 cgccaccaccatcctcgcca 66829
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>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16
          Length = 349876

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 338    cggcggtggcggtggcgttc 357
              ||||||||||||||||||||
Sbjct: 187152 cggcggtggcggtggcgttc 187171
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>emb|AL939107.1|SCO939107 Streptomyces coelicolor A3(2) complete genome; segment 4/29
          Length = 298450

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 256    accgccgccgcgatctcctc 275
              ||||||||||||||||||||
Sbjct: 188785 accgccgccgcgatctcctc 188766
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>emb|AL731610.4|OSJN00255 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0070C17,
             complete sequence
          Length = 160484

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 423   ccgcggcgccagcaccttcacgct 446
             |||||||| |||||||||||||||
Sbjct: 20004 ccgcggcgacagcaccttcacgct 19981
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>emb|AL662935.3|OSJN00146 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0094O15,
              complete sequence
          Length = 144778

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 335    ggtcggcggtggcggtggcg 354
              ||||||||||||||||||||
Sbjct: 140831 ggtcggcggtggcggtggcg 140850
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>emb|AL606684.3|OSJN00088 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085I10,
              complete sequence
          Length = 150551

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 423    ccgcggcgccagcaccttcacgct 446
              |||||||| |||||||||||||||
Sbjct: 135297 ccgcggcgacagcaccttcacgct 135274
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>emb|AJ133638.1|ASA133638 Avena sativa mRNA for myb protein
          Length = 2287

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 335  ggtcggcggtggcggtggcg 354
            ||||||||||||||||||||
Sbjct: 2037 ggtcggcggtggcggtggcg 2018
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>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 417     cggccgccgcggcgccagca 436
               ||||||||||||||||||||
Sbjct: 2851454 cggccgccgcggcgccagca 2851435
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>ref|NM_204489.1| Gallus gallus muscle RAS oncogene homolog (MRAS), mRNA
          Length = 979

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 484 acgccccgccgggccctgct 503
           ||||||||||||||||||||
Sbjct: 35  acgccccgccgggccctgct 54
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>gb|AY119506.1| Drosophila melanogaster GH12423 full insert cDNA
          Length = 3528

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 479 cggccacgccccgccgggcc 498
           ||||||||||||||||||||
Sbjct: 747 cggccacgccccgccgggcc 766
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>gb|AC009384.7| Drosophila melanogaster 3L BAC RP98-10L1 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 168652

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 479    cggccacgccccgccgggcc 498
              ||||||||||||||||||||
Sbjct: 156800 cggccacgccccgccgggcc 156781
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>gb|AC087550.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone nbeb0016G17,
             complete sequence
          Length = 141041

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 419   gccgccgcggcgccagcacc 438
             ||||||||||||||||||||
Sbjct: 92514 gccgccgcggcgccagcacc 92495
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>ref|NM_140917.1| Drosophila melanogaster CG14186-RA (CG14186), mRNA
          Length = 3505

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 479 cggccacgccccgccgggcc 498
           ||||||||||||||||||||
Sbjct: 747 cggccacgccccgccgggcc 766
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>gb|AC020666.8| Oryza sativa chromosome 10 BAC OSJNBa0082M15 genomic sequence, complete
              sequence
          Length = 158550

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 449    cgtggctctccgccagggccacct 472
              |||||||| |||||||||||||||
Sbjct: 118368 cgtggctccccgccagggccacct 118345
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>gb|AC091774.7| Oryza sativa chromosome 6 BAC OJ1540_H01 genomic sequence, complete
             sequence
          Length = 143507

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 338   cggcggtggcggtggcgttc 357
             ||||||||||||||||||||
Sbjct: 37283 cggcggtggcggtggcgttc 37264
to top
>gb|AC009383.8| Drosophila melanogaster 3L BAC RP98-31C3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 179283

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 479   cggccacgccccgccgggcc 498
             ||||||||||||||||||||
Sbjct: 32169 cggccacgccccgccgggcc 32150
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>gb|AC162310.7| Mus musculus 10 BAC RP24-225K5 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 108408

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 307   ctgaggctgaaggagtagaa 326
             ||||||||||||||||||||
Sbjct: 12518 ctgaggctgaaggagtagaa 12537
to top
>gb|AC157021.6| Mus musculus 10 BAC RP24-328K10 (Roswell Park Cancer Institute
             (C57BL/6J Male) Mouse BAC Library) complete sequence
          Length = 175825

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 307   ctgaggctgaaggagtagaa 326
             ||||||||||||||||||||
Sbjct: 54635 ctgaggctgaaggagtagaa 54616
to top
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 253     tgcaccgccgccgcgatctc 272
               ||||||||||||||||||||
Sbjct: 1591720 tgcaccgccgccgcgatctc 1591739
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 423      ccgcggcgccagcaccttcacgct 446
                |||||||| |||||||||||||||
Sbjct: 31037924 ccgcggcgacagcaccttcacgct 31037901



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 335    ggtcggcggtggcggtggcg 354
              ||||||||||||||||||||
Sbjct: 345011 ggtcggcggtggcggtggcg 345030
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 338      cggcggtggcggtggcgttc 357
                ||||||||||||||||||||
Sbjct: 29956586 cggcggtggcggtggcgttc 29956567



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 257      ccgccgccgcgatctcctccaccg 280
                |||||||||| |||||||||||||
Sbjct: 28594233 ccgccgccgccatctcctccaccg 28594210
to top
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 257      ccgccgccgcgatctcctcc 276
                ||||||||||||||||||||
Sbjct: 19669455 ccgccgccgcgatctcctcc 19669474



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 473      ccacgtcggccacgccccgc 492
                ||||||||||||||||||||
Sbjct: 10369596 ccacgtcggccacgccccgc 10369577
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 414      cctcggccgccgcggcgccagcac 437
                |||| |||||||||||||||||||
Sbjct: 17528722 cctccgccgccgcggcgccagcac 17528699



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 308     tgaggctgaaggagtagaagacca 331
               |||||||||||||||||| |||||
Sbjct: 4611804 tgaggctgaaggagtagaggacca 4611781
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 255      caccgccgccgcgatctcct 274
                ||||||||||||||||||||
Sbjct: 21043285 caccgccgccgcgatctcct 21043304
to top
>dbj|AP006878.1| Thermococcus kodakarensis KOD1 DNA, complete genome
          Length = 2088737

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 464     gggccacctccacgtcggccacgc 487
               ||||||||| ||||||||||||||
Sbjct: 1290096 gggccaccttcacgtcggccacgc 1290119
to top
>dbj|AP003443.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:B1144D11
          Length = 157943

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 255   caccgccgccgcgatctcct 274
             ||||||||||||||||||||
Sbjct: 10830 caccgccgccgcgatctcct 10849
to top
>dbj|AP003372.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:OJ1014_G12
          Length = 158830

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 255    caccgccgccgcgatctcct 274
              ||||||||||||||||||||
Sbjct: 106487 caccgccgccgcgatctcct 106506
to top
>ref|XM_341829.2| PREDICTED: Rattus norvegicus similar to Trithorax homolog 2 (Mixed
            lineage leukemia gene homolog 2 protein) (predicted)
            (LOC361543), mRNA
          Length = 9917

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 410  gctgcctcggccgccgcggc 429
            ||||||||||||||||||||
Sbjct: 1581 gctgcctcggccgccgcggc 1562
to top
>dbj|AB182389.1| Oryza sativa (japonica cultivar-group) FON1 gene for CLV1-like LRR
            receptor kinase, complete cds
          Length = 4500

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 338  cggcggtggcggtggcgttc 357
            ||||||||||||||||||||
Sbjct: 2073 cggcggtggcggtggcgttc 2092
to top
>dbj|AB182388.1| Oryza sativa (japonica cultivar-group) FON1 mRNA for CLV1-like LRR
            receptor kinase, complete cds
          Length = 3169

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 338  cggcggtggcggtggcgttc 357
            ||||||||||||||||||||
Sbjct: 1987 cggcggtggcggtggcgttc 2006
to top
>dbj|AP008227.1| Thermus thermophilus HB8 plasmid pTT27 DNA, complete sequence
          Length = 256992

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 456    ctccgccagggccacctcca 475
              ||||||||||||||||||||
Sbjct: 131308 ctccgccagggccacctcca 131289
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 336     gtcggcggtggcggtggcgt 355
               ||||||||||||||||||||
Sbjct: 5580717 gtcggcggtggcggtggcgt 5580736



 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 261    cgccgcgatctcctccaccg 280
              ||||||||||||||||||||
Sbjct: 999363 cgccgcgatctcctccaccg 999344
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>dbj|AP003769.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0541C02
          Length = 150660

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 338   cggcggtggcggtggcgttc 357
             ||||||||||||||||||||
Sbjct: 32734 cggcggtggcggtggcgttc 32715
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>dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0550B04
          Length = 150131

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 257   ccgccgccgcgatctcctccaccg 280
             |||||||||| |||||||||||||
Sbjct: 85711 ccgccgccgccatctcctccaccg 85688
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>dbj|AP003614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0481E08
          Length = 171965

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 338    cggcggtggcggtggcgttc 357
              ||||||||||||||||||||
Sbjct: 152099 cggcggtggcggtggcgttc 152080
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>dbj|AK111824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023050A06, full
            insert sequence
          Length = 3170

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 338  cggcggtggcggtggcgttc 357
            ||||||||||||||||||||
Sbjct: 1987 cggcggtggcggtggcgttc 2006
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>dbj|AK105614.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B09, full
           insert sequence
          Length = 2305

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 423 ccgcggcgccagcaccttcacgct 446
           |||||||| |||||||||||||||
Sbjct: 211 ccgcggcgacagcaccttcacgct 188
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>dbj|AK101957.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033075M20, full
           insert sequence
          Length = 1407

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 335 ggtcggcggtggcggtggcg 354
           ||||||||||||||||||||
Sbjct: 415 ggtcggcggtggcggtggcg 434
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>dbj|AK101882.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033070K17, full
           insert sequence
          Length = 2779

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 414 cctcggccgccgcggcgccagcac 437
           |||| |||||||||||||||||||
Sbjct: 134 cctccgccgccgcggcgccagcac 157
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>dbj|AK099112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023033P05, full
           insert sequence
          Length = 1071

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 449 cgtggctctccgccagggccacct 472
           |||||||| |||||||||||||||
Sbjct: 192 cgtggctccccgccagggccacct 215
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>dbj|AK073594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033051C12, full
           insert sequence
          Length = 1615

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 ccgccgccgcgatctcctccaccg 280
           |||||||||| |||||||||||||
Sbjct: 361 ccgccgccgccatctcctccaccg 338
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>dbj|AK070187.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043G12, full
           insert sequence
          Length = 1121

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 449 cgtggctctccgccagggccacct 472
           |||||||| |||||||||||||||
Sbjct: 192 cgtggctccccgccagggccacct 215
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>dbj|AK069344.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010O14, full
           insert sequence
          Length = 2254

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 423 ccgcggcgccagcaccttcacgct 446
           |||||||| |||||||||||||||
Sbjct: 160 ccgcggcgacagcaccttcacgct 137
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>dbj|AK063936.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-123-D10, full
           insert sequence
          Length = 1447

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 257 ccgccgccgcgatctcctccaccg 280
           |||||||||| |||||||||||||
Sbjct: 395 ccgccgccgccatctcctccaccg 372
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>dbj|AK060144.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A05, full
           insert sequence
          Length = 1036

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 335 ggtcggcggtggcggtggcg 354
           ||||||||||||||||||||
Sbjct: 172 ggtcggcggtggcggtggcg 191
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>gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71 of 83 of the complete
             sequence
          Length = 299903

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 479   cggccacgccccgccgggcc 498
             ||||||||||||||||||||
Sbjct: 75186 cggccacgccccgccgggcc 75167
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>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 413     gcctcggccgccgcggcgcc 432
               ||||||||||||||||||||
Sbjct: 2609981 gcctcggccgccgcggcgcc 2609962
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 259    gccgccgcgatctcctccac 278
              ||||||||||||||||||||
Sbjct: 273419 gccgccgcgatctcctccac 273400
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>emb|AL662992.3|OSJN00193 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0004G23,
             complete sequence
          Length = 115972

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 335   ggtcggcggtggcggtggcg 354
             ||||||||||||||||||||
Sbjct: 29671 ggtcggcggtggcggtggcg 29690
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>dbj|AB090309.1| Thermococcus kodakaraensis LeuRS gene for leucyl-tRNA synthetase,
           complete cds
          Length = 3967

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 464 gggccacctccacgtcggccacgc 487
           ||||||||| ||||||||||||||
Sbjct: 681 gggccaccttcacgtcggccacgc 704
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>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09,
             complete sequence
          Length = 148894

 Score = 40.1 bits (20), Expect = 6.8
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 308   tgaggctgaaggagtagaagacca 331
             |||||||||||||||||| |||||
Sbjct: 52644 tgaggctgaaggagtagaggacca 52621


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,852,955
Number of Sequences: 3902068
Number of extensions: 3852955
Number of successful extensions: 89087
Number of sequences better than 10.0: 123
Number of HSP's better than 10.0 without gapping: 135
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84435
Number of HSP's gapped (non-prelim): 4644
length of query: 503
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 481
effective length of database: 17,147,199,772
effective search space: 8247803090332
effective search space used: 8247803090332
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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