ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart41f07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK119933.1| Oryza sativa (japonica cultivar-group) cDNA clon... 301 5e-79
2gb|AC164300.3| Mus musculus BAC clone RP23-310J6 from chromosome... 46 0.048
3emb|BX088709.6| Zebrafish DNA sequence from clone CH211-15J21 in... 46 0.048
4gb|AC132449.4| Mus musculus BAC clone RP23-183J18 from 8, comple... 46 0.048
5gb|AC129942.7| Mus musculus chromosome 8, clone RP23-267A22, com... 44 0.19
6gb|AC157789.5| Mus musculus chromosome 8, clone RP24-95E2, compl... 44 0.19
7gb|AC091861.3| Homo sapiens chromosome 5 clone CTD-2339B8, compl... 44 0.19
8gb|AC026698.6| Homo sapiens chromosome 5 clone CTC-457H17, compl... 44 0.19
9gb|AC155814.6| Mus musculus BAC clone RP24-137M22 from chromosom... 44 0.19
10gb|AY728087.1| Taricha granulosa ORL1-like opioid receptor mRNA,... 44 0.19
11gb|AC005406.2| Homo sapiens clone b128f11, complete sequence 44 0.19
12gb|AC153872.2| Mus musculus 6 BAC RP23-226O20 (Roswell Park Canc... 44 0.19
13ref|XM_528133.1| PREDICTED: Pan troglodytes similar to opioid re... 42 0.75
14gb|AC004907.3| Homo sapiens PAC clone RP5-853H20 from 7, complet... 42 0.75
15emb|BX640588.5| Zebrafish DNA sequence from clone DKEY-110L7 in ... 42 0.75
16emb|AL954251.1| Pan troglodytes chromosome 22 clone PTB-044H21 m... 42 0.75
17emb|BX119974.5| Zebrafish DNA sequence from clone DKEY-237J17 in... 42 0.75
18emb|AL929204.7| Zebrafish DNA sequence from clone CH211-138E4, c... 42 0.75
19emb|AL845499.9| Mouse DNA sequence from clone RP23-232A21 on chr... 42 0.75
20gb|U11053.1|HSU11053 Human kappa opioid receptor (hKOR) mRNA, co... 42 0.75
21gb|AC160127.2| Mus musculus BAC clone RP23-295O2 from chromosome... 40 3.0
22gb|BC099912.1| Homo sapiens opioid receptor, kappa 1, mRNA (cDNA... 40 3.0
23ref|NM_000912.3| Homo sapiens opioid receptor, kappa 1 (OPRK1), ... 40 3.0
24gb|AC126448.3| Mus musculus BAC clone RP23-359M2 from chromosome... 40 3.0
25gb|AC113095.14| Mus musculus chromosome 9, clone RP23-311A1, com... 40 3.0
26emb|Z68338.1|CET24B8 Caenorhabditis elegans Cosmid T24B8, comple... 40 3.0
27gb|AC122803.4| Mus musculus BAC clone RP23-292K9 from 17, comple... 40 3.0
28emb|AL163218.2|HS21C018 Homo sapiens chromosome 21 segment HS21C018 40 3.0
29emb|Y10124.2|TTNARZYWV Thermus thermophilus nar operon (narCGHIJ... 40 3.0
30emb|AL591979.1| Listeria monocytogenes strain EGD, complete geno... 40 3.0
31gb|AC009646.12| Homo sapiens chromosome 8, clone RP11-162D9, com... 40 3.0
32gb|AC100868.2| Homo sapiens chromosome 8, clone RP11-246K8, comp... 40 3.0
33gb|AF498922.1| Homo sapiens opioid receptor kappa (OPRK1) mRNA, ... 40 3.0
34ref|NM_134474.4| Drosophila melanogaster CG32532-RA (CG32532), mRNA 40 3.0
35gb|AC104656.3| Homo sapiens BAC clone RP11-547J14 from 4, comple... 40 3.0
36gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, r... 40 3.0
37ref|NM_063535.1| Caenorhabditis elegans T24B8.4 (T24B8.4) mRNA, ... 40 3.0
38ref|NG_002199.1| Homo sapiens olfactory receptor, family 51, sub... 40 3.0
39dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
40gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, r... 40 3.0
41gb|AC092964.8| Homo sapiens 3 BAC RP11-423E7 (Roswell Park Cance... 40 3.0
42gb|AY168006.1| Homo sapiens DRG kappa 1 splice variant KOR 1A mR... 40 3.0
43dbj|AP003745.5| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
44dbj|BS000045.1| Pan troglodytes chromosome 22 clone:RP43-179P23,... 40 3.0
45emb|Y10904.1|CCMUOPI C.commersoni mRNA for mu opioid receptor 40 3.0
46dbj|AP004349.3| Oryza sativa (japonica cultivar-group) genomic D... 40 3.0
47gb|AC167701.2| Reniera sp. JGI-2005 clone JGIBAYC-9B8, complete ... 40 3.0
48emb|CR954167.21| Zebrafish DNA sequence from clone CH211-122N14 ... 40 3.0
49gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 ... 40 3.0
50gb|U17298.1|HSU17298 Human kappa opioid receptor (hKOR) mRNA, co... 40 3.0
51gb|AC124711.3| Mus musculus BAC clone RP24-100M12 from 12, compl... 40 3.0
52emb|AL683800.9| Mouse DNA sequence from clone RP23-405B8 on chro... 40 3.0
53gb|U04092.1|CPU04092 Cavia porcellus Hartley kappa opioid recept... 40 3.0
54gb|L37362.1|HUMOPRK1B Homo sapiens (clone d2-115) kappa opioid r... 40 3.0
55emb|X81445.2|HSHPFH6 Homo spaiens HPFH6OR gene for olfactory rec... 40 3.0
56dbj|AP001537.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21... 40 3.0 
>dbj|AK119933.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-184-A09, full
            insert sequence
          Length = 1094

 Score =  301 bits (152), Expect = 5e-79
 Identities = 152/152 (100%)
 Strand = Plus / Minus

                                                                        
Query: 81   gcgcgaaattatattttcacgagcaaacatgtacacaaacaaacacaaggcttggattca 140
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1094 gcgcgaaattatattttcacgagcaaacatgtacacaaacaaacacaaggcttggattca 1035

                                                                        
Query: 141  aggctagctacgagctagccatacactaacaaatggattcgccaccaccaccaggaccag 200
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1034 aggctagctacgagctagccatacactaacaaatggattcgccaccaccaccaggaccag 975

                                            
Query: 201  gtacgcacaacgagctggagtgccctcgtaga 232
            ||||||||||||||||||||||||||||||||
Sbjct: 974  gtacgcacaacgagctggagtgccctcgtaga 943
to top
>gb|AC164300.3| Mus musculus BAC clone RP23-310J6 from chromosome 8, complete sequence
          Length = 200605

 Score = 46.1 bits (23), Expect = 0.048
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 105   aaacatgtacacaaacaaacaca 127
             |||||||||||||||||||||||
Sbjct: 87422 aaacatgtacacaaacaaacaca 87444
to top
>emb|BX088709.6| Zebrafish DNA sequence from clone CH211-15J21 in linkage group 15,
             complete sequence
          Length = 156236

 Score = 46.1 bits (23), Expect = 0.048
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 105   aaacatgtacacaaacaaacaca 127
             |||||||||||||||||||||||
Sbjct: 99303 aaacatgtacacaaacaaacaca 99325
to top
>gb|AC132449.4| Mus musculus BAC clone RP23-183J18 from 8, complete sequence
          Length = 206312

 Score = 46.1 bits (23), Expect = 0.048
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 105   aaacatgtacacaaacaaacaca 127
             |||||||||||||||||||||||
Sbjct: 42393 aaacatgtacacaaacaaacaca 42371
to top
>gb|AC129942.7| Mus musculus chromosome 8, clone RP23-267A22, complete sequence
          Length = 175030

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 102   agcaaacatgtacacaaacaaacaca 127
             |||| |||||||||||||||||||||
Sbjct: 83431 agcatacatgtacacaaacaaacaca 83456
to top
>gb|AC157789.5| Mus musculus chromosome 8, clone RP24-95E2, complete sequence
          Length = 203403

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 102    agcaaacatgtacacaaacaaacaca 127
              |||| |||||||||||||||||||||
Sbjct: 201634 agcatacatgtacacaaacaaacaca 201609
to top
>gb|AC091861.3| Homo sapiens chromosome 5 clone CTD-2339B8, complete sequence
          Length = 39248

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 106   aacatgtacacaaacaaacaca 127
             ||||||||||||||||||||||
Sbjct: 17617 aacatgtacacaaacaaacaca 17596
to top
>gb|AC026698.6| Homo sapiens chromosome 5 clone CTC-457H17, complete sequence
          Length = 192731

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 106    aacatgtacacaaacaaacaca 127
              ||||||||||||||||||||||
Sbjct: 186935 aacatgtacacaaacaaacaca 186914
to top
>gb|AC155814.6| Mus musculus BAC clone RP24-137M22 from chromosome 8, complete sequence
          Length = 191336

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 102    agcaaacatgtacacaaacaaacaca 127
              |||| |||||||||||||||||||||
Sbjct: 181507 agcatacatgtacacaaacaaacaca 181532
to top
>gb|AY728087.1| Taricha granulosa ORL1-like opioid receptor mRNA, complete cds
          Length = 1120

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 180 cgccaccaccaccaggaccagg 201
           ||||||||||||||||||||||
Sbjct: 810 cgccaccaccaccaggaccagg 789
to top
>gb|AC005406.2| Homo sapiens clone b128f11, complete sequence
          Length = 226345

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 106  aacatgtacacaaacaaacaca 127
            ||||||||||||||||||||||
Sbjct: 5791 aacatgtacacaaacaaacaca 5812
to top
>gb|AC153872.2| Mus musculus 6 BAC RP23-226O20 (Roswell Park Cancer Institute (C57BL/6J
             Female) Mouse BAC Library) complete sequence
          Length = 203418

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 107   acatgtacacaaacaaacacaa 128
             ||||||||||||||||||||||
Sbjct: 65927 acatgtacacaaacaaacacaa 65906
to top
>ref|XM_528133.1| PREDICTED: Pan troglodytes similar to opioid receptor, kappa 1;
            Opiate receptor, kappa-1 (LOC472761), mRNA
          Length = 2559

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 180  cgccaccaccaccaggaccag 200
            |||||||||||||||||||||
Sbjct: 2259 cgccaccaccaccaggaccag 2239
to top
>gb|AC004907.3| Homo sapiens PAC clone RP5-853H20 from 7, complete sequence
          Length = 130117

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 111   gtacacaaacaaacacaaggc 131
             |||||||||||||||||||||
Sbjct: 44784 gtacacaaacaaacacaaggc 44804
to top
>emb|BX640588.5| Zebrafish DNA sequence from clone DKEY-110L7 in linkage group 6,
            complete sequence
          Length = 117506

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 4    ttcaactactttcaaataagtaatt 28
            |||||||| ||||||||||||||||
Sbjct: 6178 ttcaactaatttcaaataagtaatt 6154
to top
>emb|AL954251.1| Pan troglodytes chromosome 22 clone PTB-044H21 map 22q22.3, complete
             sequence
          Length = 149587

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 173   atggattcgccaccaccacca 193
             |||||||||||||||||||||
Sbjct: 91235 atggattcgccaccaccacca 91215
to top
>emb|BX119974.5| Zebrafish DNA sequence from clone DKEY-237J17 in linkage group 6,
              complete sequence
          Length = 213058

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 4      ttcaactactttcaaataagtaatt 28
              |||||||| ||||||||||||||||
Sbjct: 125472 ttcaactaatttcaaataagtaatt 125448
to top
>emb|AL929204.7| Zebrafish DNA sequence from clone CH211-138E4, complete sequence
          Length = 157519

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 107   acatgtacacaaacaaacaca 127
             |||||||||||||||||||||
Sbjct: 25675 acatgtacacaaacaaacaca 25655
to top
>emb|AL845499.9| Mouse DNA sequence from clone RP23-232A21 on chromosome 2, complete
              sequence
          Length = 151923

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 105    aaacatgtacacaaacaaaca 125
              |||||||||||||||||||||
Sbjct: 123420 aaacatgtacacaaacaaaca 123440
to top
>gb|U11053.1|HSU11053 Human kappa opioid receptor (hKOR) mRNA, complete cds
          Length = 1182

 Score = 42.1 bits (21), Expect = 0.75
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 180 cgccaccaccaccaggaccag 200
           |||||||||||||||||||||
Sbjct: 856 cgccaccaccaccaggaccag 836
to top
>gb|AC160127.2| Mus musculus BAC clone RP23-295O2 from chromosome 9, complete
            sequence
          Length = 205289

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 104  caaacatgtacacaaacaaacaca 127
            |||||||||||||| |||||||||
Sbjct: 3678 caaacatgtacacacacaaacaca 3701
to top
>gb|BC099912.1| Homo sapiens opioid receptor, kappa 1, mRNA (cDNA clone MGC:104656
            IMAGE:30531690), complete cds
          Length = 4943

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 181  gccaccaccaccaggaccag 200
            ||||||||||||||||||||
Sbjct: 1053 gccaccaccaccaggaccag 1034
to top
>ref|NM_000912.3| Homo sapiens opioid receptor, kappa 1 (OPRK1), mRNA
          Length = 4959

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 181  gccaccaccaccaggaccag 200
            ||||||||||||||||||||
Sbjct: 1077 gccaccaccaccaggaccag 1058
to top
>gb|AC126448.3| Mus musculus BAC clone RP23-359M2 from chromosome 17, complete sequence
          Length = 207537

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 48     tttgcaaatatgaaaattac 67
              ||||||||||||||||||||
Sbjct: 189983 tttgcaaatatgaaaattac 190002
to top
>gb|AC113095.14| Mus musculus chromosome 9, clone RP23-311A1, complete sequence
          Length = 205429

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 104    caaacatgtacacaaacaaacaca 127
              |||||||||||||| |||||||||
Sbjct: 170438 caaacatgtacacacacaaacaca 170461
to top
>emb|Z68338.1|CET24B8 Caenorhabditis elegans Cosmid T24B8, complete sequence
          Length = 38779

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 182   ccaccaccaccaggaccagg 201
             ||||||||||||||||||||
Sbjct: 19675 ccaccaccaccaggaccagg 19656
to top
>gb|AC122803.4| Mus musculus BAC clone RP23-292K9 from 17, complete sequence
          Length = 149990

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 48    tttgcaaatatgaaaattac 67
             ||||||||||||||||||||
Sbjct: 40695 tttgcaaatatgaaaattac 40714
to top
>emb|AL163218.2|HS21C018 Homo sapiens chromosome 21 segment HS21C018
          Length = 340000

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     aaataagtaattactctagg 36
              ||||||||||||||||||||
Sbjct: 330114 aaataagtaattactctagg 330133
to top
>emb|Y10124.2|TTNARZYWV Thermus thermophilus nar operon (narCGHIJK genes)
          Length = 10622

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 184  accaccaccaggaccaggta 203
            ||||||||||||||||||||
Sbjct: 7564 accaccaccaggaccaggta 7545
to top
>emb|AL591979.1| Listeria monocytogenes strain EGD, complete genome, segment 7/12
          Length = 240050

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 180    cgccaccaccaccaggacca 199
              ||||||||||||||||||||
Sbjct: 126352 cgccaccaccaccaggacca 126371
to top
>gb|AC009646.12| Homo sapiens chromosome 8, clone RP11-162D9, complete sequence
          Length = 183519

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 181    gccaccaccaccaggaccag 200
              ||||||||||||||||||||
Sbjct: 110957 gccaccaccaccaggaccag 110976
to top
>gb|AC100868.2| Homo sapiens chromosome 8, clone RP11-246K8, complete sequence
          Length = 160939

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 14     ttcaaataagtaattactct 33
              ||||||||||||||||||||
Sbjct: 122959 ttcaaataagtaattactct 122978
to top
>gb|AF498922.1| Homo sapiens opioid receptor kappa (OPRK1) mRNA, complete cds
          Length = 1143

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 181 gccaccaccaccaggaccag 200
           ||||||||||||||||||||
Sbjct: 842 gccaccaccaccaggaccag 823
to top
>ref|NM_134474.4| Drosophila melanogaster CG32532-RA (CG32532), mRNA
          Length = 4422

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 182  ccaccaccaccaggaccagg 201
            ||||||||||||||||||||
Sbjct: 1325 ccaccaccaccaggaccagg 1306
to top
>gb|AC104656.3| Homo sapiens BAC clone RP11-547J14 from 4, complete sequence
          Length = 175350

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 46     gctttgcaaatatgaaaatt 65
              ||||||||||||||||||||
Sbjct: 104796 gctttgcaaatatgaaaatt 104815
to top
>gb|AC011071.12|AC011071 Drosophila melanogaster, chromosome X, region 18C-18D, BAC clone
              BACR27L16, complete sequence
          Length = 182623

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    ccaccaccaccaggaccagg 201
              ||||||||||||||||||||
Sbjct: 147511 ccaccaccaccaggaccagg 147530
to top
>ref|NM_063535.1| Caenorhabditis elegans T24B8.4 (T24B8.4) mRNA, complete cds
          Length = 2745

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 182 ccaccaccaccaggaccagg 201
           ||||||||||||||||||||
Sbjct: 286 ccaccaccaccaggaccagg 305
to top
>ref|NG_002199.1| Homo sapiens olfactory receptor, family 51, subfamily A, member 1
            pseudogene (OR51A1P) on chromosome 11
          Length = 1265

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   gctttgcaaatatgaaaatt 65
            ||||||||||||||||||||
Sbjct: 1034 gctttgcaaatatgaaaatt 1053
to top
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 106      aacatgtacacaaacaaaca 125
                ||||||||||||||||||||
Sbjct: 13385155 aacatgtacacaaacaaaca 13385174
to top
>gb|AC010847.11|AC010847 Drosophila melanogaster, chromosome X, region 18D-18D, BAC clone
             BACR10M08, complete sequence
          Length = 180213

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 182   ccaccaccaccaggaccagg 201
             ||||||||||||||||||||
Sbjct: 85991 ccaccaccaccaggaccagg 86010
to top
>gb|AC092964.8| Homo sapiens 3 BAC RP11-423E7 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 114995

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   atgtacacaaacaaacacaa 128
             ||||||||||||||||||||
Sbjct: 48454 atgtacacaaacaaacacaa 48435
to top
>gb|AY168006.1| Homo sapiens DRG kappa 1 splice variant KOR 1A mRNA, complete cds,
            alternatively spliced
          Length = 1396

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 181  gccaccaccaccaggaccag 200
            ||||||||||||||||||||
Sbjct: 1036 gccaccaccaccaggaccag 1017
to top
>dbj|AP003745.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1123_B01
          Length = 105736

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   aacatgtacacaaacaaaca 125
             ||||||||||||||||||||
Sbjct: 99593 aacatgtacacaaacaaaca 99612
to top
>dbj|BS000045.1| Pan troglodytes chromosome 22 clone:RP43-179P23, map 22, complete
              sequences
          Length = 179114

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 17     aaataagtaattactctagg 36
              ||||||||||||||||||||
Sbjct: 132703 aaataagtaattactctagg 132722
to top
>emb|Y10904.1|CCMUOPI C.commersoni mRNA for mu opioid receptor
          Length = 1231

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 180 cgccaccaccaccaggacca 199
           ||||||||||||||||||||
Sbjct: 888 cgccaccaccaccaggacca 869
to top
>dbj|AP004349.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0684A03
          Length = 64705

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 106   aacatgtacacaaacaaaca 125
             ||||||||||||||||||||
Sbjct: 10914 aacatgtacacaaacaaaca 10933
to top
>gb|AC167701.2| Reniera sp. JGI-2005 clone JGIBAYC-9B8, complete sequence
          Length = 41777

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    tactttcaaataagtaatta 29
             ||||||||||||||||||||
Sbjct: 38626 tactttcaaataagtaatta 38607
to top
>emb|CR954167.21| Zebrafish DNA sequence from clone CH211-122N14 in linkage group 8,
             complete sequence
          Length = 160594

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 109   atgtacacaaacaaacacaa 128
             ||||||||||||||||||||
Sbjct: 50940 atgtacacaaacaaacacaa 50921
to top
>gb|AE003512.3| Drosophila melanogaster chromosome X, section 64 of 74 of the complete
              sequence
          Length = 346474

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 182    ccaccaccaccaggaccagg 201
              ||||||||||||||||||||
Sbjct: 191757 ccaccaccaccaggaccagg 191776
to top
>gb|U17298.1|HSU17298 Human kappa opioid receptor (hKOR) mRNA, complete cds
          Length = 1154

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 181 gccaccaccaccaggaccag 200
           ||||||||||||||||||||
Sbjct: 842 gccaccaccaccaggaccag 823
to top
>gb|AC124711.3| Mus musculus BAC clone RP24-100M12 from 12, complete sequence
          Length = 225134

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 109    atgtacacaaacaaacacaa 128
              ||||||||||||||||||||
Sbjct: 198967 atgtacacaaacaaacacaa 198986
to top
>emb|AL683800.9| Mouse DNA sequence from clone RP23-405B8 on chromosome X, complete
              sequence
          Length = 198175

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 104    caaacatgtacacaaacaaacaca 127
              |||||||| |||||||||||||||
Sbjct: 110773 caaacatgcacacaaacaaacaca 110796
to top
>gb|U04092.1|CPU04092 Cavia porcellus Hartley kappa opioid receptor mRNA, complete cds
          Length = 1733

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 181  gccaccaccaccaggaccag 200
            ||||||||||||||||||||
Sbjct: 1081 gccaccaccaccaggaccag 1062
to top
>gb|L37362.1|HUMOPRK1B Homo sapiens (clone d2-115) kappa opioid receptor (OPRK1) mRNA,
            complete cds
          Length = 1604

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 181  gccaccaccaccaggaccag 200
            ||||||||||||||||||||
Sbjct: 1219 gccaccaccaccaggaccag 1200
to top
>emb|X81445.2|HSHPFH6 Homo spaiens HPFH6OR gene for olfactory receptor
          Length = 3157

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 46   gctttgcaaatatgaaaatt 65
            ||||||||||||||||||||
Sbjct: 2452 gctttgcaaatatgaaaatt 2471
to top
>dbj|AP001537.1| Homo sapiens genomic DNA, chromosome 21q21.1-q21.2 clone:B749F18,
             LL56-APP region, complete sequence
          Length = 81450

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    aaataagtaattactctagg 36
             ||||||||||||||||||||
Sbjct: 66415 aaataagtaattactctagg 66434


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,566,364
Number of Sequences: 3902068
Number of extensions: 3566364
Number of successful extensions: 78675
Number of sequences better than 10.0: 56
Number of HSP's better than 10.0 without gapping: 56
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 78560
Number of HSP's gapped (non-prelim): 115
length of query: 232
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 210
effective length of database: 17,147,199,772
effective search space: 3600911952120
effective search space used: 3600911952120
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top