>dbj|AK104436.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-F03, full
           insert sequence
          Length = 1194

 Score =  107 bits (54), Expect = 2e-20
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                       
Query: 175 gagatattgagcacgttgacaacatcattgttcagccattcaaaaccttccttatcctgc 234
           |||||||| || || ||||||||||||||| | ||||||||||||||||| ||||| || 
Sbjct: 949 gagatatttagtacattgacaacatcattggtgagccattcaaaaccttctttatcttgt 890

                                                             
Query: 235 agtgttgcgccaatcaaactctcgccaaaatttgcaatctgggatgcaag 284
           ||||| || |||||  ||||||| | ||||||||||||||||||||||||
Sbjct: 889 agtgtggcaccaatataactctcacaaaaatttgcaatctgggatgcaag 840

>dbj|AK104272.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-312-A09, full
           insert sequence
          Length = 1089

 Score =  107 bits (54), Expect = 2e-20
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                       
Query: 175 gagatattgagcacgttgacaacatcattgttcagccattcaaaaccttccttatcctgc 234
           |||||||| || || ||||||||||||||| | ||||||||||||||||| ||||| || 
Sbjct: 869 gagatatttagtacattgacaacatcattggtgagccattcaaaaccttctttatcttgt 810

                                                             
Query: 235 agtgttgcgccaatcaaactctcgccaaaatttgcaatctgggatgcaag 284
           ||||| || |||||  ||||||| | ||||||||||||||||||||||||
Sbjct: 809 agtgtggcaccaatataactctcacaaaaatttgcaatctgggatgcaag 760

>dbj|AK098962.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013074C02, full
           insert sequence
          Length = 1164

 Score =  107 bits (54), Expect = 2e-20
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                       
Query: 175 gagatattgagcacgttgacaacatcattgttcagccattcaaaaccttccttatcctgc 234
           |||||||| || || ||||||||||||||| | ||||||||||||||||| ||||| || 
Sbjct: 944 gagatatttagtacattgacaacatcattggtgagccattcaaaaccttctttatcttgt 885

                                                             
Query: 235 agtgttgcgccaatcaaactctcgccaaaatttgcaatctgggatgcaag 284
           ||||| || |||||  ||||||| | ||||||||||||||||||||||||
Sbjct: 884 agtgtggcaccaatataactctcacaaaaatttgcaatctgggatgcaag 835

>dbj|AK068733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159G20, full
           insert sequence
          Length = 1224

 Score =  107 bits (54), Expect = 2e-20
 Identities = 96/110 (87%)
 Strand = Plus / Minus

                                                                       
Query: 175 gagatattgagcacgttgacaacatcattgttcagccattcaaaaccttccttatcctgc 234
           |||||||| || || ||||||||||||||| | ||||||||||||||||| ||||| || 
Sbjct: 950 gagatatttagtacattgacaacatcattggtgagccattcaaaaccttctttatcttgt 891

                                                             
Query: 235 agtgttgcgccaatcaaactctcgccaaaatttgcaatctgggatgcaag 284
           ||||| || |||||  ||||||| | ||||||||||||||||||||||||
Sbjct: 890 agtgtggcaccaatataactctcacaaaaatttgcaatctgggatgcaag 841

>ref|NM_191869.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 930

 Score = 81.8 bits (41), Expect = 1e-12
 Identities = 68/77 (88%)
 Strand = Plus / Minus

                                                                       
Query: 208 agccattcaaaaccttccttatcctgcagtgttgcgccaatcaaactctcgccaaaattt 267
           ||||||||||||||||| ||||| || ||||| || |||||  ||||||| | |||||||
Sbjct: 866 agccattcaaaaccttctttatcttgtagtgtggcaccaatataactctcacaaaaattt 807

                            
Query: 268 gcaatctgggatgcaag 284
           |||||||||||||||||
Sbjct: 806 gcaatctgggatgcaag 790

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                            
Query: 210      ccattcaaaaccttccttatcctgcagtgttgcgccaatcaaactctcgccaaaatttgc 269
                ||||||||||||||| ||||| || ||||| || |||||  ||||||| | |||||||||
Sbjct: 30394588 ccattcaaaaccttctttatcttgtagtgtggcaccaatataactctcacaaaaatttgc 30394529

                               
Query: 270      aatctgggatgcaag 284
                |||||||||||||||
Sbjct: 30394528 aatctgggatgcaag 30394514

>dbj|AP003142.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0435H01
          Length = 160141

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                         
Query: 210   ccattcaaaaccttccttatcctgcagtgttgcgccaatcaaactctcgccaaaatttgc 269
             ||||||||||||||| ||||| || ||||| || |||||  ||||||| | |||||||||
Sbjct: 22851 ccattcaaaaccttctttatcttgtagtgtggcaccaatataactctcacaaaaatttgc 22792

                            
Query: 270   aatctgggatgcaag 284
             |||||||||||||||
Sbjct: 22791 aatctgggatgcaag 22777

>dbj|AP002899.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0456A01
          Length = 143710

 Score = 77.8 bits (39), Expect = 2e-11
 Identities = 66/75 (88%)
 Strand = Plus / Minus

                                                                         
Query: 210   ccattcaaaaccttccttatcctgcagtgttgcgccaatcaaactctcgccaaaatttgc 269
             ||||||||||||||| ||||| || ||||| || |||||  ||||||| | |||||||||
Sbjct: 80315 ccattcaaaaccttctttatcttgtagtgtggcaccaatataactctcacaaaaatttgc 80256

                            
Query: 270   aatctgggatgcaag 284
             |||||||||||||||
Sbjct: 80255 aatctgggatgcaag 80241

>gb|BT019028.1| Zea mays clone Contig534.F mRNA sequence
          Length = 1159

 Score = 58.0 bits (29), Expect = 2e-05
 Identities = 47/53 (88%)
 Strand = Plus / Minus

                                                                
Query: 175 gagatattgagcacgttgacaacatcattgttcagccattcaaaaccttcctt 227
           |||||||| || || ||||||| ||| || |||||||||||||||||||||||
Sbjct: 899 gagatattcagtacattgacaatatcgttattcagccattcaaaaccttcctt 847

>ref|NM_106509.3| Arabidopsis thaliana unknown protein AT1G78620 transcript variant
           AT1G78620.1 mRNA, complete cds
          Length = 2029

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 181 ttgagcacgttgacaacatcattgttcagccatt 214
           |||| ||||||||| ||||||||||| |||||||
Sbjct: 971 ttgatcacgttgactacatcattgtttagccatt 938

>ref|NM_202442.1| Arabidopsis thaliana unknown protein AT1G78620 transcript variant
           AT1G78620.2 mRNA, complete cds
          Length = 2056

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 181 ttgagcacgttgacaacatcattgttcagccatt 214
           |||| ||||||||| ||||||||||| |||||||
Sbjct: 998 ttgatcacgttgactacatcattgtttagccatt 965

>gb|AY063010.1| Arabidopsis thaliana unknown protein (At1g78620) mRNA, complete cds
          Length = 1033

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 181 ttgagcacgttgacaacatcattgttcagccatt 214
           |||| ||||||||| ||||||||||| |||||||
Sbjct: 935 ttgatcacgttgactacatcattgtttagccatt 902

>gb|AY035002.1| Arabidopsis thaliana unknown protein (At1g78620) mRNA, complete cds
          Length = 1234

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 181 ttgagcacgttgacaacatcattgttcagccatt 214
           |||| ||||||||| ||||||||||| |||||||
Sbjct: 965 ttgatcacgttgactacatcattgtttagccatt 932

>emb|BX818535.1|CNS0ACNO Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL84ZC06 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 1093

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 181 ttgagcacgttgacaacatcattgttcagccatt 214
           |||| ||||||||| ||||||||||| |||||||
Sbjct: 860 ttgatcacgttgactacatcattgtttagccatt 827

>gb|AY087104.1| Arabidopsis thaliana clone 3173 mRNA, complete sequence
          Length = 1228

 Score = 44.1 bits (22), Expect = 0.24
 Identities = 31/34 (91%)
 Strand = Plus / Minus

                                             
Query: 181 ttgagcacgttgacaacatcattgttcagccatt 214
           |||| ||||||||| ||||||||||| |||||||
Sbjct: 971 ttgatcacgttgactacatcattgtttagccatt 938

>gb|AC132617.4| Mus musculus BAC clone RP23-230A6 from chromosome 12, complete sequence
          Length = 239046

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 98     agaagtcaggaaacaaggat 117
              ||||||||||||||||||||
Sbjct: 169880 agaagtcaggaaacaaggat 169861

>gb|AY426987.1| Homo sapiens activating transcription factor 3 (ATF3) gene, complete
            cds
          Length = 15966

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 50   cccagaccacactcatccta 69
            ||||||||||||||||||||
Sbjct: 6920 cccagaccacactcatccta 6939

>emb|AL590648.9| Human DNA sequence from clone RP11-338C15 on chromosome 1 Contains
            the 3' end of the ATF3 gene for activating transcription
            factor 3, three novel genes (FLJ32796) (FLJ40118) and a
            riboflavin kinase pseudogene, complete sequence
          Length = 65096

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 50   cccagaccacactcatccta 69
            ||||||||||||||||||||
Sbjct: 3044 cccagaccacactcatccta 3063

>dbj|AK125255.1| Homo sapiens cDNA FLJ43265 fis, clone HLUNG2018626, highly  similar
           to Rattus norvegicus Activating transcription factor 3
           (Atf3)
          Length = 2098

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 50  cccagaccacactcatccta 69
           ||||||||||||||||||||
Sbjct: 260 cccagaccacactcatccta 279

>gb|AC120570.5| Rattus norvegicus 1 BAC CH230-96N8 (Children's Hospital Oakland
             Research Institute) complete sequence
          Length = 227607

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 61    ctcatcctaaaagactgtga 80
             ||||||||||||||||||||
Sbjct: 58932 ctcatcctaaaagactgtga 58951

>dbj|AP006248.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-349F21, complete
             sequence
          Length = 186218

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   aatcaaactctcgccaaaat 265
             ||||||||||||||||||||
Sbjct: 31319 aatcaaactctcgccaaaat 31338

>dbj|AP006246.1| Homo sapiens genomic DNA, chromosome 8, clone:RP11-159M14, complete
              sequence
          Length = 178517

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 246    aatcaaactctcgccaaaat 265
              ||||||||||||||||||||
Sbjct: 121947 aatcaaactctcgccaaaat 121966

>dbj|AB020862.1| Homo sapiens genomic DNA of 8p21.3-p22 anti-oncogene of hepatocellular
             colorectal and non-small cell lung cancer , segment 5/11
          Length = 100000

 Score = 40.1 bits (20), Expect = 3.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 246   aatcaaactctcgccaaaat 265
             ||||||||||||||||||||
Sbjct: 78863 aatcaaactctcgccaaaat 78882


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,369,009
Number of Sequences: 3902068
Number of extensions: 2369009
Number of successful extensions: 74830
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74779
Number of HSP's gapped (non-prelim): 51
length of query: 289
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 267
effective length of database: 17,147,199,772
effective search space: 4578302339124
effective search space used: 4578302339124
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)