>gb|AY661558.1| Hordeum vulgare subsp. vulgare eIF4E gene locus, complete sequence
          Length = 439641

 Score =  716 bits (361), Expect = 0.0
 Identities = 367/369 (99%)
 Strand = Plus / Minus

                                                                          
Query: 1      cacatccaagttggcacacacaaatgacaactgagcagtcttctgcactggaaaccatct 60
              |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107066 cacatccaagtttgcacacacaaatgacaactgagcagtcttctgcactggaaaccatct 107007

                                                                          
Query: 61     cgcgtgcaagatagatccagcagtagagtagactaaacactgcagctaaaacaagtttgc 120
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107006 cgcgtgcaagatagatccagcagtagagtagactaaacactgcagctaaaacaagtttgc 106947

                                                                          
Query: 121    acacacaactgacaactgagcagtcttctgcactggaaaccatctcgcgtgcaagataga 180
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106946 acacacaactgacaactgagcagtcttctgcactggaaaccatctcgcgtgcaagataga 106887

                                                                          
Query: 181    tccagcagtagagtagactaaacactgcagctaaaacaagtttgcacacacaactgacaa 240
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106886 tccagcagtagagtagactaaacactgcagctaaaacaagtttgcacacacaactgacaa 106827

                                                                          
Query: 241    ctgagcagtcttctgcactggaaaccatctcgcgcgcaagatagatccagcagtagagta 300
              |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 106826 ctgagcagtcttctgcactggaaaccatctcgcgtgcaagatagatccagcagtagagta 106767

                                                                          
Query: 301    gactaaacactgcacctaaaacaagttatgcttctcatcatagaataaaatgagacttat 360
              ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106766 gactaaacactgcacctaaaacaagttatgcttctcatcatagaataaaatgagacttat 106707

                       
Query: 361    ggagtacaa 369
              |||||||||
Sbjct: 106706 ggagtacaa 106698

>emb|AJ699059.1| Hordeum vulgare mRNA for putative translation initiation factor 4E
           (eIF4E gene)
          Length = 1040

 Score =  105 bits (53), Expect = 1e-19
 Identities = 53/53 (100%)
 Strand = Plus / Minus

                                                                
Query: 317 taaaacaagttatgcttctcatcatagaataaaatgagacttatggagtacaa 369
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 971 taaaacaagttatgcttctcatcatagaataaaatgagacttatggagtacaa 919

>emb|Z12616.2|TAIF4FP26 Triticum aestivum mRNA for eukaryotic initiation factor 4E p26
           subunit (eIF4E gene)
          Length = 894

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 338 tcatagaataaaatgagacttatggagtacaa 369
           ||||| ||||||||| ||||||||||||||||
Sbjct: 862 tcataaaataaaatgtgacttatggagtacaa 831

>emb|Z12612.1|XLU3BG X.laevis U3B gene for U3 small nuclear RNA
          Length = 999

 Score = 48.1 bits (24), Expect = 0.020
 Identities = 30/32 (93%)
 Strand = Plus / Minus

                                           
Query: 338 tcatagaataaaatgagacttatggagtacaa 369
           ||||| ||||||||| ||||||||||||||||
Sbjct: 967 tcataaaataaaatgtgacttatggagtacaa 936

>gb|AC117539.6| Papio hamadryas, clone RP41-208E11, complete sequence
          Length = 208592

 Score = 44.1 bits (22), Expect = 0.31
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 330   gcttctcatcatagaataaaat 351
             ||||||||||||||||||||||
Sbjct: 57838 gcttctcatcatagaataaaat 57817

>emb|AL935264.12| Mouse DNA sequence from clone RP23-118A9 on chromosome 4, complete
             sequence
          Length = 230886

 Score = 42.1 bits (21), Expect = 1.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 15    cacacacaaatgacaactgag 35
             |||||||||||||||||||||
Sbjct: 31109 cacacacaaatgacaactgag 31089

>gb|AC102369.21| Mus musculus chromosome 12, clone RP23-246F14, complete sequence
          Length = 214580

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 308    cactgcacctaaaacaagtt 327
              ||||||||||||||||||||
Sbjct: 182521 cactgcacctaaaacaagtt 182502



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 203    cactgcagctaaaacaagtttgca 226
              ||||||| ||||||||||||||||
Sbjct: 182521 cactgcacctaaaacaagtttgca 182498



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 98     cactgcagctaaaacaagtttgca 121
              ||||||| ||||||||||||||||
Sbjct: 182521 cactgcacctaaaacaagtttgca 182498

>gb|AC099597.6| Mus musculus chromosome 17, clone RP23-78K9, complete sequence
          Length = 272221

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    tggcacacacaaatgacaac 31
             ||||||||||||||||||||
Sbjct: 26219 tggcacacacaaatgacaac 26200

>emb|CT010484.7| Mouse DNA sequence from clone RP23-296N14 on chromosome 17, complete
             sequence
          Length = 212827

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 12    tggcacacacaaatgacaac 31
             ||||||||||||||||||||
Sbjct: 43774 tggcacacacaaatgacaac 43755

>emb|CR847515.10| Zebrafish DNA sequence from clone DKEYP-60A7 in linkage group 9,
             complete sequence
          Length = 153947

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 15    cacacacaaatgacaactga 34
             ||||||||||||||||||||
Sbjct: 12890 cacacacaaatgacaactga 12871

>gb|AC144592.26| Medicago truncatula clone mth2-23m13, complete sequence
          Length = 139267

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 211   ctaaaacaagtttgcacacacaac 234
             ||||||||| ||||||||||||||
Sbjct: 34443 ctaaaacaactttgcacacacaac 34466



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 106   ctaaaacaagtttgcacacacaac 129
             ||||||||| ||||||||||||||
Sbjct: 34443 ctaaaacaactttgcacacacaac 34466

>emb|CR974412.1| M.murinus DNA sequence from clone CH257-37C10, complete sequence
          Length = 250701

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     cacacacaaatgacaactga 34
              ||||||||||||||||||||
Sbjct: 127296 cacacacaaatgacaactga 127315

>emb|AL136445.9| Human DNA sequence from clone RP3-376F14 on chromosome 6q12-13 Contains
             part of the COL19A1 gene for collagen type XIX alpha 1,
             complete sequence
          Length = 51877

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 92    actaaacactgcagctaaaa 111
             ||||||||||||||||||||
Sbjct: 49381 actaaacactgcagctaaaa 49362



 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 197   actaaacactgcagctaaaa 216
             ||||||||||||||||||||
Sbjct: 49381 actaaacactgcagctaaaa 49362

>emb|BX936305.18| Zebrafish DNA sequence from clone CH211-51N3 in linkage group 13,
             complete sequence
          Length = 150383

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 314   acctaaaacaagttatgctt 333
             ||||||||||||||||||||
Sbjct: 13613 acctaaaacaagttatgctt 13632

>emb|BX914217.19| Zebrafish DNA sequence from clone DKEY-175H14 in linkage group 18,
              complete sequence
          Length = 133981

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 314    acctaaaacaagttatgctt 333
              ||||||||||||||||||||
Sbjct: 122812 acctaaaacaagttatgctt 122793

>emb|BX663610.8| Zebrafish DNA sequence from clone DKEYP-114A6 in linkage group 3,
              complete sequence
          Length = 120560

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     cacacacaaatgacaactga 34
              ||||||||||||||||||||
Sbjct: 112405 cacacacaaatgacaactga 112424

>emb|AL929434.3| Zebrafish DNA sequence from clone CH211-127L15, complete sequence
          Length = 178948

 Score = 40.1 bits (20), Expect = 4.9
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 15     cacacacaaatgacaactga 34
              ||||||||||||||||||||
Sbjct: 164500 cacacacaaatgacaactga 164519


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,442,934
Number of Sequences: 3902068
Number of extensions: 3442934
Number of successful extensions: 59136
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 59099
Number of HSP's gapped (non-prelim): 33
length of query: 369
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 347
effective length of database: 17,147,199,772
effective search space: 5950078320884
effective search space used: 5950078320884
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)