ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | rbart41e08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_479429.1| Oryza sativa (japonica cultivar-group), mRNA Length = 930 Score = 119 bits (60), Expect = 9e-24 Identities = 105/120 (87%) Strand = Plus / Minus Query: 127 cggcgccggcttgttggccgccttgcccaccgtgcacccgccgtcgacgactaggttgtg 186 |||||||||| ||||| ||||||||| || ||| |||||||||||||||| |||||||| Sbjct: 921 cggcgccggcaggttgggcgccttgccgacggtgtacccgccgtcgacgacgaggttgtg 862 Query: 187 cccgttgacatacttggcctcgtcggccgccaggtacacggcggccctggcgatgtcctc 246 ||||| || |||||||||||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 861 gccgttcacgtacttggcctcgtcggaggccaggtacaccgccgccctcgcgatgtcctc 802 Score = 48.1 bits (24), Expect = 0.028 Identities = 66/80 (82%) Strand = Plus / Minus Query: 380 gagatggcgttcacgcgcaccccgtggcggcccagctccccggcgaacgcgcgcacggcg 439 |||||||||||||||||||| ||| ||| ||| ||| |||||| ||||| || ||| Sbjct: 671 gagatggcgttcacgcgcacgccggagcgcgccatctcgccggcggcggcgcggaccgcg 612 Query: 440 ccgatgacggcggccttgga 459 |||| |||||||||||||| Sbjct: 611 ccgagcacggcggccttgga 592
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 119 bits (60), Expect = 9e-24 Identities = 105/120 (87%) Strand = Plus / Minus Query: 127 cggcgccggcttgttggccgccttgcccaccgtgcacccgccgtcgacgactaggttgtg 186 |||||||||| ||||| ||||||||| || ||| |||||||||||||||| |||||||| Sbjct: 27939003 cggcgccggcaggttgggcgccttgccgacggtgtacccgccgtcgacgacgaggttgtg 27938944 Query: 187 cccgttgacatacttggcctcgtcggccgccaggtacacggcggccctggcgatgtcctc 246 ||||| || |||||||||||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 27938943 gccgttcacgtacttggcctcgtcggaggccaggtacaccgccgccctcgcgatgtcctc 27938884 Score = 101 bits (51), Expect = 2e-18 Identities = 84/95 (88%) Strand = Plus / Minus Query: 162 acccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggccgccaggt 221 |||||||||||||||| ||||| |||||| |||| |||||||||||||||| || |||| Sbjct: 28002758 acccgccgtcgacgacgaggttatgcccggtgacgtacttggcctcgtcggaggcgaggt 28002699 Query: 222 acacggcggccctggcgatgtcctccacctccagc 256 |||| || ||||| |||||||||||| |||||||| Sbjct: 28002698 acaccgccgccctcgcgatgtcctccgcctccagc 28002664 Score = 95.6 bits (48), Expect = 1e-16 Identities = 93/108 (86%) Strand = Plus / Minus Query: 149 ttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcctcg 208 |||||||||||| | |||||||||||||| |||||||| ||| |||| ||||||||||| Sbjct: 28021255 ttgcccaccgtgaagccgccgtcgacgacgaggttgtggccggtgacgaacttggcctcg 28021196 Query: 209 tcggccgccaggtacacggcggccctggcgatgtcctccacctccagc 256 |||| ||||| | ||||||| ||||| || | ||| |||||||||||| Sbjct: 28021195 tcggacgccaagaacacggccgccctcgccacgtcttccacctccagc 28021148 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 162 acccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggccgccaggt 221 ||||| |||||||||| |||||||||||||| || ||| |||||||||||| ||||||| Sbjct: 27968092 acccggcgtcgacgacgaggttgtgcccgttcacgtacctggcctcgtcggaggccaggt 27968033 Query: 222 acacggcggccctggcgatgtcctcc 247 |||| || ||||| |||||||||||| Sbjct: 27968032 acaccgccgccctcgcgatgtcctcc 27968007 Score = 91.7 bits (46), Expect = 2e-15 Identities = 91/106 (85%) Strand = Plus / Minus Query: 155 accgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggcc 214 |||||| |||||||||||| ||| |||| |||||| |||| ||||||||||||||| | Sbjct: 24075940 accgtgaacccgccgtcgatgacgtggttctgcccggtgacgaacttggcctcgtcggac 24075881 Query: 215 gccaggtacacggcggccctggcgatgtcctccacctccagcaccg 260 |||||||| ||||| ||||| || | |||||||| ||||||||||| Sbjct: 24075880 gccaggtagacggccgccctcgccacgtcctccagctccagcaccg 24075835 Score = 83.8 bits (42), Expect = 5e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 147 ccttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcct 206 ||||||| |||||| | ||||| |||||||| |||||||| ||| |||| ||||||||| Sbjct: 28005258 ccttgccgaccgtgaagccgccatcgacgacgaggttgtggccggtgacgaacttggcct 28005199 Query: 207 cgtcggccgccaggtacacggcggccctggcgatgtcctccacctccagc 256 |||||| ||||| | | ||||| ||||| || | |||||||||||||||| Sbjct: 28005198 cgtcggacgccaagaagacggccgccctcgccacgtcctccacctccagc 28005149 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 148 cttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcctc 207 |||||| || ||| ||||||| |||||||| ||||| ||||| ||| ||||||||||| Sbjct: 27999546 cttgccgacggtgaacccgccatcgacgacgaggttatgcccagtgatgtacttggcctc 27999487 Query: 208 gtcggccgccaggtacacggcggccctggcgatgtcctccacctccagc 256 ||||| || |||||||| || ||||| |||||||||||| |||||||| Sbjct: 27999486 gtcggaggcgaggtacaccgccgccctcgcgatgtcctccgcctccagc 27999438 Score = 79.8 bits (40), Expect = 8e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 164 ccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggccgccaggtac 223 |||||||||||||| ||||| ||||||||||| |||||||||||||||| || |||||| Sbjct: 27952418 ccgccgtcgacgacgaggttatgcccgttgacgtacttggcctcgtcggaggcgaggtac 27952359 Query: 224 acggcggccctggcga 239 || || ||||| |||| Sbjct: 27952358 accgccgccctcgcga 27952343 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Minus Query: 147 ccttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcct 206 ||||||| ||||| |||||||||||||||| |||||||| ||| ||| ||||||||| Sbjct: 28017710 ccttgcctgccgtgaacccgccgtcgacgacgaggttgtggccggtgatgaacttggcct 28017651 Query: 207 cgtcggccgccaggtacacggcggccctggcgatgtcctccacctccagc 256 |||||| ||||| | | ||||| ||||| || | ||| |||||||||||| Sbjct: 28017650 cgtcggacgccaagaagacggccgccctcgccacgtcttccacctccagc 28017601 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 360 gcgtcgctatgccgtgcggcgagatggcgttcacgcgcaccccgtggcggcccagctccc 419 ||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||| | Sbjct: 27999337 gcgtcgcgatgccgtgcggcgagatggcgttcagccgcacgccgtggcgcgccagctcgc 27999278 Query: 420 cggcg 424 ||||| Sbjct: 27999277 cggcg 27999273 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 132 ccggcttgttggccgccttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgt 191 ||||| |||||| | ||||||| || ||| ||||||||||||| || ||||||||||||| Sbjct: 27943533 ccggcatgttgggcaccttgccgacggtgtacccgccgtcgacaacgaggttgtgcccgt 27943474 Query: 192 tgacatacttggcctcgtcgg 212 | || ||||| |||||||||| Sbjct: 27943473 tcacgtacttagcctcgtcgg 27943453 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 152 cccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcg 211 ||||||||| | |||||||||||||| ||||| || ||||||| ||| ||||||||||| Sbjct: 27992410 cccaccgtgaagccgccgtcgacgacgaggttatggccgttgatgtacctggcctcgtcg 27992351 Query: 212 gccgccaggtacacggcggccct 234 | ||||||| | ||||| ||||| Sbjct: 27992350 gacgccaggaagacggccgccct 27992328 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 164 ccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtc 210 |||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 27950209 ccgccgtcaacgacgaggttgtgcccgttgacatacttagcctcgtc 27950163 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Minus Query: 147 ccttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcct 206 ||||||| || ||| | |||||||||||||| |||||||| ||| ||| ||||||||| Sbjct: 28009367 ccttgcctacagtgaagccgccgtcgacgacgaggttgtggccggtgatgaacttggcct 28009308 Query: 207 cgtcggccgccaggtacacggcggccctggcgatgtcctccacctccagc 256 |||||| ||||| | | ||||| ||||| || | ||| |||||||||||| Sbjct: 28009307 cgtcggacgccaagaagacggccgccctcgccacgtcttccacctccagc 28009258 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 360 gcgtcgctatgccgtgcggcgagatggcgttcacgcgcac 399 ||||||| ||| |||||||||||||||||||||||||||| Sbjct: 24075738 gcgtcgcgatggcgtgcggcgagatggcgttcacgcgcac 24075699 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 373 gtgcggcgagatggcgttcacgcgcaccccgt 404 ||||||||||||||||||||||||||| |||| Sbjct: 28005035 gtgcggcgagatggcgttcacgcgcacgccgt 28005004 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 162 acccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggccgccaggt 221 |||||||||||||||| |||||||| ||| | || ||| |||||||||||| || |||| Sbjct: 27961063 acccgccgtcgacgacgaggttgtggccggtcacgtacctggcctcgtcggaggcgaggt 27961004 Query: 222 acac 225 |||| Sbjct: 27961003 acac 27961000 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 369 tgccgtgcggcgagatggcgttcacgcgcaccccgtggcg 408 ||||||||||||||||||||||||| |||| |||||||| Sbjct: 27950013 tgccgtgcggcgagatggcgttcacccgcaggccgtggcg 27949974 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 372 cgtgcggcgagatggcgttcacgcgcaccccgt 404 |||||||||||||||||||||| ||||| |||| Sbjct: 28021035 cgtgcggcgagatggcgttcacccgcacgccgt 28021003 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 372 cgtgcggcgagatggcgttcacgcgcaccccgt 404 |||||||||||||||||||||| ||||| |||| Sbjct: 28017488 cgtgcggcgagatggcgttcacccgcacgccgt 28017456 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Minus Query: 376 cggcgagatggcgttcacgcgcaccccgtggcggcccagctccccggc 423 |||||||| ||||||| | ||||| |||||||| ||||||||||||| Sbjct: 27992186 cggcgagacggcgttcgcccgcacgccgtggcgcgccagctccccggc 27992139 Score = 48.1 bits (24), Expect = 0.028 Identities = 66/80 (82%) Strand = Plus / Minus Query: 380 gagatggcgttcacgcgcaccccgtggcggcccagctccccggcgaacgcgcgcacggcg 439 |||||||||||||||||||| ||| ||| ||| ||| |||||| ||||| || ||| Sbjct: 27938753 gagatggcgttcacgcgcacgccggagcgcgccatctcgccggcggcggcgcggaccgcg 27938694 Query: 440 ccgatgacggcggccttgga 459 |||| |||||||||||||| Sbjct: 27938693 ccgagcacggcggccttgga 27938674 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 372 cgtgcggcgagatggcgttcacgcgcaccccgt 404 ||||||||||||||| |||||| ||||| |||| Sbjct: 28009145 cgtgcggcgagatggtgttcacccgcacgccgt 28009113 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 376 cggcgagatggcgttcacgcgcaccccgtggcg 408 |||||||||||||||||| |||| |||||||| Sbjct: 27967872 cggcgagatggcgttcacacgcaggccgtggcg 27967840 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 376 cggcgagatggcgttcacgcgcaccccgtggcg 408 |||||||||||||||||| |||| |||||||| Sbjct: 27960855 cggcgagatggcgttcacccgcaggccgtggcg 27960823 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 376 cggcgagatggcgttcacgcgcaccccgtggcg 408 |||||||||||||||||| |||| |||||||| Sbjct: 27952215 cggcgagatggcgttcacccgcaggccgtggcg 27952183 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 gagatggcgttcacgcgcac 399 |||||||||||||||||||| Sbjct: 27943288 gagatggcgttcacgcgcac 27943269
>dbj|AP005452.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0453E03 Length = 159980 Score = 119 bits (60), Expect = 9e-24 Identities = 105/120 (87%) Strand = Plus / Minus Query: 127 cggcgccggcttgttggccgccttgcccaccgtgcacccgccgtcgacgactaggttgtg 186 |||||||||| ||||| ||||||||| || ||| |||||||||||||||| |||||||| Sbjct: 102361 cggcgccggcaggttgggcgccttgccgacggtgtacccgccgtcgacgacgaggttgtg 102302 Query: 187 cccgttgacatacttggcctcgtcggccgccaggtacacggcggccctggcgatgtcctc 246 ||||| || |||||||||||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 102301 gccgttcacgtacttggcctcgtcggaggccaggtacaccgccgccctcgcgatgtcctc 102242 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 162 acccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggccgccaggt 221 ||||| |||||||||| |||||||||||||| || ||| |||||||||||| ||||||| Sbjct: 131450 acccggcgtcgacgacgaggttgtgcccgttcacgtacctggcctcgtcggaggccaggt 131391 Query: 222 acacggcggccctggcgatgtcctcc 247 |||| || ||||| |||||||||||| Sbjct: 131390 acaccgccgccctcgcgatgtcctcc 131365 Score = 79.8 bits (40), Expect = 8e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 164 ccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggccgccaggtac 223 |||||||||||||| ||||| ||||||||||| |||||||||||||||| || |||||| Sbjct: 115776 ccgccgtcgacgacgaggttatgcccgttgacgtacttggcctcgtcggaggcgaggtac 115717 Query: 224 acggcggccctggcga 239 || || ||||| |||| Sbjct: 115716 accgccgccctcgcga 115701 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 132 ccggcttgttggccgccttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgt 191 ||||| |||||| | ||||||| || ||| ||||||||||||| || ||||||||||||| Sbjct: 106891 ccggcatgttgggcaccttgccgacggtgtacccgccgtcgacaacgaggttgtgcccgt 106832 Query: 192 tgacatacttggcctcgtcgg 212 | || ||||| |||||||||| Sbjct: 106831 tcacgtacttagcctcgtcgg 106811 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 152 cccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcg 211 ||||||||| | |||||||||||||| ||||| || ||||||| ||| ||||||||||| Sbjct: 155768 cccaccgtgaagccgccgtcgacgacgaggttatggccgttgatgtacctggcctcgtcg 155709 Query: 212 gccgccaggtacacggcggccct 234 | ||||||| | ||||| ||||| Sbjct: 155708 gacgccaggaagacggccgccct 155686 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 164 ccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtc 210 |||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 113567 ccgccgtcaacgacgaggttgtgcccgttgacatacttagcctcgtc 113521 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 162 acccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggccgccaggt 221 |||||||||||||||| |||||||| ||| | || ||| |||||||||||| || |||| Sbjct: 124421 acccgccgtcgacgacgaggttgtggccggtcacgtacctggcctcgtcggaggcgaggt 124362 Query: 222 acac 225 |||| Sbjct: 124361 acac 124358 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 369 tgccgtgcggcgagatggcgttcacgcgcaccccgtggcg 408 ||||||||||||||||||||||||| |||| |||||||| Sbjct: 113371 tgccgtgcggcgagatggcgttcacccgcaggccgtggcg 113332 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Minus Query: 376 cggcgagatggcgttcacgcgcaccccgtggcggcccagctccccggc 423 |||||||| ||||||| | ||||| |||||||| ||||||||||||| Sbjct: 155544 cggcgagacggcgttcgcccgcacgccgtggcgcgccagctccccggc 155497 Score = 48.1 bits (24), Expect = 0.028 Identities = 66/80 (82%) Strand = Plus / Minus Query: 380 gagatggcgttcacgcgcaccccgtggcggcccagctccccggcgaacgcgcgcacggcg 439 |||||||||||||||||||| ||| ||| ||| ||| |||||| ||||| || ||| Sbjct: 102111 gagatggcgttcacgcgcacgccggagcgcgccatctcgccggcggcggcgcggaccgcg 102052 Query: 440 ccgatgacggcggccttgga 459 |||| |||||||||||||| Sbjct: 102051 ccgagcacggcggccttgga 102032 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 376 cggcgagatggcgttcacgcgcaccccgtggcg 408 |||||||||||||||||| |||| |||||||| Sbjct: 131230 cggcgagatggcgttcacacgcaggccgtggcg 131198 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 376 cggcgagatggcgttcacgcgcaccccgtggcg 408 |||||||||||||||||| |||| |||||||| Sbjct: 124213 cggcgagatggcgttcacccgcaggccgtggcg 124181 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 376 cggcgagatggcgttcacgcgcaccccgtggcg 408 |||||||||||||||||| |||| |||||||| Sbjct: 115573 cggcgagatggcgttcacccgcaggccgtggcg 115541 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 gagatggcgttcacgcgcac 399 |||||||||||||||||||| Sbjct: 106646 gagatggcgttcacgcgcac 106627
>dbj|AP003825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1343_D04 Length = 143407 Score = 119 bits (60), Expect = 9e-24 Identities = 105/120 (87%) Strand = Plus / Minus Query: 127 cggcgccggcttgttggccgccttgcccaccgtgcacccgccgtcgacgactaggttgtg 186 |||||||||| ||||| ||||||||| || ||| |||||||||||||||| |||||||| Sbjct: 28337 cggcgccggcaggttgggcgccttgccgacggtgtacccgccgtcgacgacgaggttgtg 28278 Query: 187 cccgttgacatacttggcctcgtcggccgccaggtacacggcggccctggcgatgtcctc 246 ||||| || |||||||||||||||| ||||||||||| || ||||| ||||||||||| Sbjct: 28277 gccgttcacgtacttggcctcgtcggaggccaggtacaccgccgccctcgcgatgtcctc 28218 Score = 101 bits (51), Expect = 2e-18 Identities = 84/95 (88%) Strand = Plus / Minus Query: 162 acccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggccgccaggt 221 |||||||||||||||| ||||| |||||| |||| |||||||||||||||| || |||| Sbjct: 92092 acccgccgtcgacgacgaggttatgcccggtgacgtacttggcctcgtcggaggcgaggt 92033 Query: 222 acacggcggccctggcgatgtcctccacctccagc 256 |||| || ||||| |||||||||||| |||||||| Sbjct: 92032 acaccgccgccctcgcgatgtcctccgcctccagc 91998 Score = 95.6 bits (48), Expect = 1e-16 Identities = 93/108 (86%) Strand = Plus / Minus Query: 149 ttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcctcg 208 |||||||||||| | |||||||||||||| |||||||| ||| |||| ||||||||||| Sbjct: 110589 ttgcccaccgtgaagccgccgtcgacgacgaggttgtggccggtgacgaacttggcctcg 110530 Query: 209 tcggccgccaggtacacggcggccctggcgatgtcctccacctccagc 256 |||| ||||| | ||||||| ||||| || | ||| |||||||||||| Sbjct: 110529 tcggacgccaagaacacggccgccctcgccacgtcttccacctccagc 110482 Score = 91.7 bits (46), Expect = 2e-15 Identities = 76/86 (88%) Strand = Plus / Minus Query: 162 acccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggccgccaggt 221 ||||| |||||||||| |||||||||||||| || ||| |||||||||||| ||||||| Sbjct: 57426 acccggcgtcgacgacgaggttgtgcccgttcacgtacctggcctcgtcggaggccaggt 57367 Query: 222 acacggcggccctggcgatgtcctcc 247 |||| || ||||| |||||||||||| Sbjct: 57366 acaccgccgccctcgcgatgtcctcc 57341 Score = 83.8 bits (42), Expect = 5e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 147 ccttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcct 206 ||||||| |||||| | ||||| |||||||| |||||||| ||| |||| ||||||||| Sbjct: 94592 ccttgccgaccgtgaagccgccatcgacgacgaggttgtggccggtgacgaacttggcct 94533 Query: 207 cgtcggccgccaggtacacggcggccctggcgatgtcctccacctccagc 256 |||||| ||||| | | ||||| ||||| || | |||||||||||||||| Sbjct: 94532 cgtcggacgccaagaagacggccgccctcgccacgtcctccacctccagc 94483 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 148 cttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcctc 207 |||||| || ||| ||||||| |||||||| ||||| ||||| ||| ||||||||||| Sbjct: 88880 cttgccgacggtgaacccgccatcgacgacgaggttatgcccagtgatgtacttggcctc 88821 Query: 208 gtcggccgccaggtacacggcggccctggcgatgtcctccacctccagc 256 ||||| || |||||||| || ||||| |||||||||||| |||||||| Sbjct: 88820 gtcggaggcgaggtacaccgccgccctcgcgatgtcctccgcctccagc 88772 Score = 79.8 bits (40), Expect = 8e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 164 ccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggccgccaggtac 223 |||||||||||||| ||||| ||||||||||| |||||||||||||||| || |||||| Sbjct: 41752 ccgccgtcgacgacgaggttatgcccgttgacgtacttggcctcgtcggaggcgaggtac 41693 Query: 224 acggcggccctggcga 239 || || ||||| |||| Sbjct: 41692 accgccgccctcgcga 41677 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Minus Query: 147 ccttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcct 206 ||||||| ||||| |||||||||||||||| |||||||| ||| ||| ||||||||| Sbjct: 107044 ccttgcctgccgtgaacccgccgtcgacgacgaggttgtggccggtgatgaacttggcct 106985 Query: 207 cgtcggccgccaggtacacggcggccctggcgatgtcctccacctccagc 256 |||||| ||||| | | ||||| ||||| || | ||| |||||||||||| Sbjct: 106984 cgtcggacgccaagaagacggccgccctcgccacgtcttccacctccagc 106935 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 360 gcgtcgctatgccgtgcggcgagatggcgttcacgcgcaccccgtggcggcccagctccc 419 ||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||| | Sbjct: 88671 gcgtcgcgatgccgtgcggcgagatggcgttcagccgcacgccgtggcgcgccagctcgc 88612 Query: 420 cggcg 424 ||||| Sbjct: 88611 cggcg 88607 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 132 ccggcttgttggccgccttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgt 191 ||||| |||||| | ||||||| || ||| ||||||||||||| || ||||||||||||| Sbjct: 32867 ccggcatgttgggcaccttgccgacggtgtacccgccgtcgacaacgaggttgtgcccgt 32808 Query: 192 tgacatacttggcctcgtcgg 212 | || ||||| |||||||||| Sbjct: 32807 tcacgtacttagcctcgtcgg 32787 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 152 cccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcg 211 ||||||||| | |||||||||||||| ||||| || ||||||| ||| ||||||||||| Sbjct: 81744 cccaccgtgaagccgccgtcgacgacgaggttatggccgttgatgtacctggcctcgtcg 81685 Query: 212 gccgccaggtacacggcggccct 234 | ||||||| | ||||| ||||| Sbjct: 81684 gacgccaggaagacggccgccct 81662 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 164 ccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtc 210 |||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 39543 ccgccgtcaacgacgaggttgtgcccgttgacatacttagcctcgtc 39497 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Minus Query: 147 ccttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcct 206 ||||||| || ||| | |||||||||||||| |||||||| ||| ||| ||||||||| Sbjct: 98701 ccttgcctacagtgaagccgccgtcgacgacgaggttgtggccggtgatgaacttggcct 98642 Query: 207 cgtcggccgccaggtacacggcggccctggcgatgtcctccacctccagc 256 |||||| ||||| | | ||||| ||||| || | ||| |||||||||||| Sbjct: 98641 cgtcggacgccaagaagacggccgccctcgccacgtcttccacctccagc 98592 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 373 gtgcggcgagatggcgttcacgcgcaccccgt 404 ||||||||||||||||||||||||||| |||| Sbjct: 94369 gtgcggcgagatggcgttcacgcgcacgccgt 94338 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 162 acccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggccgccaggt 221 |||||||||||||||| |||||||| ||| | || ||| |||||||||||| || |||| Sbjct: 50397 acccgccgtcgacgacgaggttgtggccggtcacgtacctggcctcgtcggaggcgaggt 50338 Query: 222 acac 225 |||| Sbjct: 50337 acac 50334 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 369 tgccgtgcggcgagatggcgttcacgcgcaccccgtggcg 408 ||||||||||||||||||||||||| |||| |||||||| Sbjct: 39347 tgccgtgcggcgagatggcgttcacccgcaggccgtggcg 39308 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 372 cgtgcggcgagatggcgttcacgcgcaccccgt 404 |||||||||||||||||||||| ||||| |||| Sbjct: 110369 cgtgcggcgagatggcgttcacccgcacgccgt 110337 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 372 cgtgcggcgagatggcgttcacgcgcaccccgt 404 |||||||||||||||||||||| ||||| |||| Sbjct: 106822 cgtgcggcgagatggcgttcacccgcacgccgt 106790 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Minus Query: 376 cggcgagatggcgttcacgcgcaccccgtggcggcccagctccccggc 423 |||||||| ||||||| | ||||| |||||||| ||||||||||||| Sbjct: 81520 cggcgagacggcgttcgcccgcacgccgtggcgcgccagctccccggc 81473 Score = 48.1 bits (24), Expect = 0.028 Identities = 66/80 (82%) Strand = Plus / Minus Query: 380 gagatggcgttcacgcgcaccccgtggcggcccagctccccggcgaacgcgcgcacggcg 439 |||||||||||||||||||| ||| ||| ||| ||| |||||| ||||| || ||| Sbjct: 28087 gagatggcgttcacgcgcacgccggagcgcgccatctcgccggcggcggcgcggaccgcg 28028 Query: 440 ccgatgacggcggccttgga 459 |||| |||||||||||||| Sbjct: 28027 ccgagcacggcggccttgga 28008 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 372 cgtgcggcgagatggcgttcacgcgcaccccgt 404 ||||||||||||||| |||||| ||||| |||| Sbjct: 98479 cgtgcggcgagatggtgttcacccgcacgccgt 98447 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 376 cggcgagatggcgttcacgcgcaccccgtggcg 408 |||||||||||||||||| |||| |||||||| Sbjct: 57206 cggcgagatggcgttcacacgcaggccgtggcg 57174 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 376 cggcgagatggcgttcacgcgcaccccgtggcg 408 |||||||||||||||||| |||| |||||||| Sbjct: 50189 cggcgagatggcgttcacccgcaggccgtggcg 50157 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 376 cggcgagatggcgttcacgcgcaccccgtggcg 408 |||||||||||||||||| |||| |||||||| Sbjct: 41549 cggcgagatggcgttcacccgcaggccgtggcg 41517 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 gagatggcgttcacgcgcac 399 |||||||||||||||||||| Sbjct: 32622 gagatggcgttcacgcgcac 32603
>ref|NM_186066.1| Oryza sativa (japonica cultivar-group), mRNA Length = 891 Score = 101 bits (51), Expect = 2e-18 Identities = 84/95 (88%) Strand = Plus / Minus Query: 162 acccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggccgccaggt 221 |||||||||||||||| ||||| |||||| |||| |||||||||||||||| || |||| Sbjct: 853 acccgccgtcgacgacgaggttatgcccggtgacgtacttggcctcgtcggaggcgaggt 794 Query: 222 acacggcggccctggcgatgtcctccacctccagc 256 |||| || ||||| |||||||||||| |||||||| Sbjct: 793 acaccgccgccctcgcgatgtcctccgcctccagc 759
>ref|NM_186072.1| Oryza sativa (japonica cultivar-group), mRNA Length = 951 Score = 95.6 bits (48), Expect = 1e-16 Identities = 93/108 (86%) Strand = Plus / Minus Query: 149 ttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcctcg 208 |||||||||||| | |||||||||||||| |||||||| ||| |||| ||||||||||| Sbjct: 917 ttgcccaccgtgaagccgccgtcgacgacgaggttgtggccggtgacgaacttggcctcg 858 Query: 209 tcggccgccaggtacacggcggccctggcgatgtcctccacctccagc 256 |||| ||||| | ||||||| ||||| || | ||| |||||||||||| Sbjct: 857 tcggacgccaagaacacggccgccctcgccacgtcttccacctccagc 810 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 372 cgtgcggcgagatggcgttcacgcgcaccccgt 404 |||||||||||||||||||||| ||||| |||| Sbjct: 697 cgtgcggcgagatggcgttcacccgcacgccgt 665
>dbj|AP004274.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0450A04 Length = 162545 Score = 95.6 bits (48), Expect = 1e-16 Identities = 93/108 (86%) Strand = Plus / Minus Query: 149 ttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcctcg 208 |||||||||||| | |||||||||||||| |||||||| ||| |||| ||||||||||| Sbjct: 4551 ttgcccaccgtgaagccgccgtcgacgacgaggttgtggccggtgacgaacttggcctcg 4492 Query: 209 tcggccgccaggtacacggcggccctggcgatgtcctccacctccagc 256 |||| ||||| | ||||||| ||||| || | ||| |||||||||||| Sbjct: 4491 tcggacgccaagaacacggccgccctcgccacgtcttccacctccagc 4444 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Minus Query: 147 ccttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcct 206 ||||||| ||||| |||||||||||||||| |||||||| ||| ||| ||||||||| Sbjct: 1006 ccttgcctgccgtgaacccgccgtcgacgacgaggttgtggccggtgatgaacttggcct 947 Query: 207 cgtcggccgccaggtacacggcggccctggcgatgtcctccacctccagc 256 |||||| ||||| | | ||||| ||||| || | ||| |||||||||||| Sbjct: 946 cgtcggacgccaagaagacggccgccctcgccacgtcttccacctccagc 897 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 372 cgtgcggcgagatggcgttcacgcgcaccccgt 404 |||||||||||||||||||||| ||||| |||| Sbjct: 4331 cgtgcggcgagatggcgttcacccgcacgccgt 4299 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 372 cgtgcggcgagatggcgttcacgcgcaccccgt 404 |||||||||||||||||||||| ||||| |||| Sbjct: 784 cgtgcggcgagatggcgttcacccgcacgccgt 752
>dbj|AK061088.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-206-G08, full insert sequence Length = 1031 Score = 95.6 bits (48), Expect = 1e-16 Identities = 93/108 (86%) Strand = Plus / Plus Query: 149 ttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcctcg 208 |||||||||||| | |||||||||||||| |||||||| ||| |||| ||||||||||| Sbjct: 62 ttgcccaccgtgaagccgccgtcgacgacgaggttgtggccggtgacgaacttggcctcg 121 Query: 209 tcggccgccaggtacacggcggccctggcgatgtcctccacctccagc 256 |||| ||||| | ||||||| ||||| || | ||| |||||||||||| Sbjct: 122 tcggacgccaagaacacggccgccctcgccacgtcttccacctccagc 169 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Plus Query: 372 cgtgcggcgagatggcgttcacgcgcaccccgt 404 |||||||||||||||||||||| ||||| |||| Sbjct: 282 cgtgcggcgagatggcgttcacccgcacgccgt 314
>ref|XM_478972.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1042 Score = 91.7 bits (46), Expect = 2e-15 Identities = 91/106 (85%) Strand = Plus / Minus Query: 155 accgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggcc 214 |||||| |||||||||||| ||| |||| |||||| |||| ||||||||||||||| | Sbjct: 940 accgtgaacccgccgtcgatgacgtggttctgcccggtgacgaacttggcctcgtcggac 881 Query: 215 gccaggtacacggcggccctggcgatgtcctccacctccagcaccg 260 |||||||| ||||| ||||| || | |||||||| ||||||||||| Sbjct: 880 gccaggtagacggccgccctcgccacgtcctccagctccagcaccg 835 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 360 gcgtcgctatgccgtgcggcgagatggcgttcacgcgcac 399 ||||||| ||| |||||||||||||||||||||||||||| Sbjct: 738 gcgtcgcgatggcgtgcggcgagatggcgttcacgcgcac 699
>dbj|AP003846.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1710_H11 Length = 136107 Score = 91.7 bits (46), Expect = 2e-15 Identities = 91/106 (85%) Strand = Plus / Minus Query: 155 accgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggcc 214 |||||| |||||||||||| ||| |||| |||||| |||| ||||||||||||||| | Sbjct: 9355 accgtgaacccgccgtcgatgacgtggttctgcccggtgacgaacttggcctcgtcggac 9296 Query: 215 gccaggtacacggcggccctggcgatgtcctccacctccagcaccg 260 |||||||| ||||| ||||| || | |||||||| ||||||||||| Sbjct: 9295 gccaggtagacggccgccctcgccacgtcctccagctccagcaccg 9250 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 360 gcgtcgctatgccgtgcggcgagatggcgttcacgcgcac 399 ||||||| ||| |||||||||||||||||||||||||||| Sbjct: 9153 gcgtcgcgatggcgtgcggcgagatggcgttcacgcgcac 9114
>dbj|AK107947.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-135-B07, full insert sequence Length = 1042 Score = 91.7 bits (46), Expect = 2e-15 Identities = 91/106 (85%) Strand = Plus / Minus Query: 155 accgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggcc 214 |||||| |||||||||||| ||| |||| |||||| |||| ||||||||||||||| | Sbjct: 940 accgtgaacccgccgtcgatgacgtggttctgcccggtgacgaacttggcctcgtcggac 881 Query: 215 gccaggtacacggcggccctggcgatgtcctccacctccagcaccg 260 |||||||| ||||| ||||| || | |||||||| ||||||||||| Sbjct: 880 gccaggtagacggccgccctcgccacgtcctccagctccagcaccg 835 Score = 63.9 bits (32), Expect = 5e-07 Identities = 38/40 (95%) Strand = Plus / Minus Query: 360 gcgtcgctatgccgtgcggcgagatggcgttcacgcgcac 399 ||||||| ||| |||||||||||||||||||||||||||| Sbjct: 738 gcgtcgcgatggcgtgcggcgagatggcgttcacgcgcac 699
>gb|DQ384227.1| Otatea acuminata short-chain dehydrogenase/reductase gene, partial cds Length = 699 Score = 89.7 bits (45), Expect = 8e-15 Identities = 182/227 (80%), Gaps = 3/227 (1%) Strand = Plus / Minus Query: 197 tacttggcctcgtcggccgccaggtacacggcggccctggcgatgtcctccacctccagc 256 |||||||||||||| | ||||||||||||||| ||||| || | ||||||| |||||||| Sbjct: 692 tacttggcctcgtccgacgccaggtacacggccgccctcgccacgtcctccgcctccagc 633 Query: 257 accgtcccgccgcccatctcgttcatgcccgtctccaccatccgcttcagctccccctcg 316 |||| |||||| || |||| | | || |||| | |||||||||| ||||| | ||| Sbjct: 632 accg---cgccgcgcagctcgcttagatccttctcgatcatccgcttccgctcctcgtcg 576 Query: 317 ctcgcctccgggaacagctccgccagcccgcgcagcccgaaccgcgtcgctatgccgtgc 376 |||| ||| |||| | || |||| | ||| || || ||| ||||||| ||||||||| Sbjct: 575 ctcgactctgggagtaactgggccaacgcgcccataccaaacggcgtcgcgatgccgtgc 516 Query: 377 ggcgagatggcgttcacgcgcaccccgtggcggcccagctccccggc 423 |||||||||| |||||| ||||| ||||||| | ||||||||||| Sbjct: 515 ggcgagatggagttcacccgcacgccgtggctcgcaagctccccggc 469
>ref|NM_186067.1| Oryza sativa (japonica cultivar-group), mRNA Length = 921 Score = 83.8 bits (42), Expect = 5e-13 Identities = 93/110 (84%) Strand = Plus / Minus Query: 147 ccttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcct 206 ||||||| |||||| | ||||| |||||||| |||||||| ||| |||| ||||||||| Sbjct: 889 ccttgccgaccgtgaagccgccatcgacgacgaggttgtggccggtgacgaacttggcct 830 Query: 207 cgtcggccgccaggtacacggcggccctggcgatgtcctccacctccagc 256 |||||| ||||| | | ||||| ||||| || | |||||||||||||||| Sbjct: 829 cgtcggacgccaagaagacggccgccctcgccacgtcctccacctccagc 780 Score = 56.0 bits (28), Expect = 1e-04 Identities = 31/32 (96%) Strand = Plus / Minus Query: 373 gtgcggcgagatggcgttcacgcgcaccccgt 404 ||||||||||||||||||||||||||| |||| Sbjct: 666 gtgcggcgagatggcgttcacgcgcacgccgt 635
>ref|NM_186065.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1026 Score = 81.8 bits (41), Expect = 2e-12 Identities = 92/109 (84%) Strand = Plus / Minus Query: 148 cttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcctc 207 |||||| || ||| ||||||| |||||||| ||||| ||||| ||| ||||||||||| Sbjct: 1002 cttgccgacggtgaacccgccatcgacgacgaggttatgcccagtgatgtacttggcctc 943 Query: 208 gtcggccgccaggtacacggcggccctggcgatgtcctccacctccagc 256 ||||| || |||||||| || ||||| |||||||||||| |||||||| Sbjct: 942 gtcggaggcgaggtacaccgccgccctcgcgatgtcctccgcctccagc 894 Score = 73.8 bits (37), Expect = 5e-10 Identities = 58/65 (89%) Strand = Plus / Minus Query: 360 gcgtcgctatgccgtgcggcgagatggcgttcacgcgcaccccgtggcggcccagctccc 419 ||||||| ||||||||||||||||||||||||| ||||| |||||||| ||||||| | Sbjct: 793 gcgtcgcgatgccgtgcggcgagatggcgttcagccgcacgccgtggcgcgccagctcgc 734 Query: 420 cggcg 424 ||||| Sbjct: 733 cggcg 729
>ref|XM_479432.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1032 Score = 79.8 bits (40), Expect = 8e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 164 ccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggccgccaggtac 223 |||||||||||||| ||||| ||||||||||| |||||||||||||||| || |||||| Sbjct: 858 ccgccgtcgacgacgaggttatgcccgttgacgtacttggcctcgtcggaggcgaggtac 799 Query: 224 acggcggccctggcga 239 || || ||||| |||| Sbjct: 798 accgccgccctcgcga 783 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 376 cggcgagatggcgttcacgcgcaccccgtggcg 408 |||||||||||||||||| |||| |||||||| Sbjct: 655 cggcgagatggcgttcacccgcaggccgtggcg 623
>dbj|AK061856.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-G03, full insert sequence Length = 1032 Score = 79.8 bits (40), Expect = 8e-12 Identities = 67/76 (88%) Strand = Plus / Minus Query: 164 ccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggccgccaggtac 223 |||||||||||||| ||||| ||||||||||| |||||||||||||||| || |||||| Sbjct: 858 ccgccgtcgacgacgaggttatgcccgttgacgtacttggcctcgtcggaggcgaggtac 799 Query: 224 acggcggccctggcga 239 || || ||||| |||| Sbjct: 798 accgccgccctcgcga 783 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 376 cggcgagatggcgttcacgcgcaccccgtggcg 408 |||||||||||||||||| |||| |||||||| Sbjct: 655 cggcgagatggcgttcacccgcaggccgtggcg 623
>ref|NM_186071.1| Oryza sativa (japonica cultivar-group), mRNA Length = 951 Score = 75.8 bits (38), Expect = 1e-10 Identities = 92/110 (83%) Strand = Plus / Minus Query: 147 ccttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcct 206 ||||||| ||||| |||||||||||||||| |||||||| ||| ||| ||||||||| Sbjct: 919 ccttgcctgccgtgaacccgccgtcgacgacgaggttgtggccggtgatgaacttggcct 860 Query: 207 cgtcggccgccaggtacacggcggccctggcgatgtcctccacctccagc 256 |||||| ||||| | | ||||| ||||| || | ||| |||||||||||| Sbjct: 859 cgtcggacgccaagaagacggccgccctcgccacgtcttccacctccagc 810 Score = 50.1 bits (25), Expect = 0.007 Identities = 31/33 (93%) Strand = Plus / Minus Query: 372 cgtgcggcgagatggcgttcacgcgcaccccgt 404 |||||||||||||||||||||| ||||| |||| Sbjct: 697 cgtgcggcgagatggcgttcacccgcacgccgt 665
>ref|XM_479430.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1033 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 132 ccggcttgttggccgccttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgt 191 ||||| |||||| | ||||||| || ||| ||||||||||||| || ||||||||||||| Sbjct: 919 ccggcatgttgggcaccttgccgacggtgtacccgccgtcgacaacgaggttgtgcccgt 860 Query: 192 tgacatacttggcctcgtcgg 212 | || ||||| |||||||||| Sbjct: 859 tcacgtacttagcctcgtcgg 839 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 gagatggcgttcacgcgcac 399 |||||||||||||||||||| Sbjct: 674 gagatggcgttcacgcgcac 655
>dbj|AK107157.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-E09, full insert sequence Length = 1033 Score = 73.8 bits (37), Expect = 5e-10 Identities = 70/81 (86%) Strand = Plus / Minus Query: 132 ccggcttgttggccgccttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgt 191 ||||| |||||| | ||||||| || ||| ||||||||||||| || ||||||||||||| Sbjct: 919 ccggcatgttgggcaccttgccgacggtgtacccgccgtcgacaacgaggttgtgcccgt 860 Query: 192 tgacatacttggcctcgtcgg 212 | || ||||| |||||||||| Sbjct: 859 tcacgtacttagcctcgtcgg 839 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 380 gagatggcgttcacgcgcac 399 |||||||||||||||||||| Sbjct: 674 gagatggcgttcacgcgcac 655
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 168 cgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggccgccaggtacacgg 227 |||||||||| | |||||||||||| || ||| |||||||||||| ||||||||||| | Sbjct: 9123334 cgtcgacgacgatgttgtgcccgttcacgtacctggcctcgtcggaggccaggtacaccg 9123393 Query: 228 cggccctggcgatgtcctcc 247 | ||||| ||||| |||||| Sbjct: 9123394 ccgccctcgcgatatcctcc 9123413 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Minus Query: 373 gtgcggcgagatggcgttcacgcgcaccccgt 404 ||||||||||||||||||||| ||||| |||| Sbjct: 3853285 gtgcggcgagatggcgttcacccgcacaccgt 3853254 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 376 cggcgagatggcgttcacgcgcaccccgtggcg 408 |||||||||||||||||| |||| |||||||| Sbjct: 9123542 cggcgagatggcgttcacccgcaggccgtggcg 9123574
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Plus Query: 168 cgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggccgccaggtacacgg 227 |||||||||| | |||||||||||| || ||| |||||||||||| ||||||||||| | Sbjct: 9123219 cgtcgacgacgatgttgtgcccgttcacgtacctggcctcgtcggaggccaggtacaccg 9123278 Query: 228 cggccctggcgatgtcctcc 247 | ||||| ||||| |||||| Sbjct: 9123279 ccgccctcgcgatatcctcc 9123298 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Minus Query: 373 gtgcggcgagatggcgttcacgcgcaccccgt 404 ||||||||||||||||||||| ||||| |||| Sbjct: 3853259 gtgcggcgagatggcgttcacccgcacaccgt 3853228 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Plus Query: 376 cggcgagatggcgttcacgcgcaccccgtggcg 408 |||||||||||||||||| |||| |||||||| Sbjct: 9123427 cggcgagatggcgttcacccgcaggccgtggcg 9123459
>emb|AL713954.3|CNS07YPZ Oryza sativa chromosome 12, . BAC OJ1134_G02 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121600 Score = 71.9 bits (36), Expect = 2e-09 Identities = 69/80 (86%) Strand = Plus / Minus Query: 168 cgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggccgccaggtacacgg 227 |||||||||| | |||||||||||| || ||| |||||||||||| ||||||||||| | Sbjct: 83511 cgtcgacgacgatgttgtgcccgttcacgtacctggcctcgtcggaggccaggtacaccg 83452 Query: 228 cggccctggcgatgtcctcc 247 | ||||| ||||| |||||| Sbjct: 83451 ccgccctcgcgatatcctcc 83432 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 376 cggcgagatggcgttcacgcgcaccccgtggcg 408 |||||||||||||||||| |||| |||||||| Sbjct: 83303 cggcgagatggcgttcacccgcaggccgtggcg 83271
>ref|XM_479435.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1192 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 152 cccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcg 211 ||||||||| | |||||||||||||| ||||| || ||||||| ||| ||||||||||| Sbjct: 882 cccaccgtgaagccgccgtcgacgacgaggttatggccgttgatgtacctggcctcgtcg 823 Query: 212 gccgccaggtacacggcggccct 234 | ||||||| | ||||| ||||| Sbjct: 822 gacgccaggaagacggccgccct 800 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Minus Query: 376 cggcgagatggcgttcacgcgcaccccgtggcggcccagctccccggc 423 |||||||| ||||||| | ||||| |||||||| ||||||||||||| Sbjct: 658 cggcgagacggcgttcgcccgcacgccgtggcgcgccagctccccggc 611
>ref|XM_479431.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1160 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 164 ccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtc 210 |||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 958 ccgccgtcaacgacgaggttgtgcccgttgacatacttagcctcgtc 912 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 369 tgccgtgcggcgagatggcgttcacgcgcaccccgtggcg 408 ||||||||||||||||||||||||| |||| |||||||| Sbjct: 762 tgccgtgcggcgagatggcgttcacccgcaggccgtggcg 723
>dbj|AK109088.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-154-H12, full insert sequence Length = 1193 Score = 69.9 bits (35), Expect = 8e-09 Identities = 71/83 (85%) Strand = Plus / Minus Query: 152 cccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcg 211 ||||||||| | |||||||||||||| ||||| || ||||||| ||| ||||||||||| Sbjct: 882 cccaccgtgaagccgccgtcgacgacgaggttatggccgttgatgtacctggcctcgtcg 823 Query: 212 gccgccaggtacacggcggccct 234 | ||||||| | ||||| ||||| Sbjct: 822 gacgccaggaagacggccgccct 800 Score = 48.1 bits (24), Expect = 0.028 Identities = 42/48 (87%) Strand = Plus / Minus Query: 376 cggcgagatggcgttcacgcgcaccccgtggcggcccagctccccggc 423 |||||||| ||||||| | ||||| |||||||| ||||||||||||| Sbjct: 658 cggcgagacggcgttcgcccgcacgccgtggcgcgccagctccccggc 611
>dbj|AK107619.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-D02, full insert sequence Length = 1581 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 164 ccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtc 210 |||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 957 ccgccgtcaacgacgaggttgtgcccgttgacatacttagcctcgtc 911 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 369 tgccgtgcggcgagatggcgttcacgcgcaccccgtggcg 408 ||||||||||||||||||||||||| |||| |||||||| Sbjct: 761 tgccgtgcggcgagatggcgttcacccgcaggccgtggcg 722
>dbj|AK104614.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-E02, full insert sequence Length = 1159 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 164 ccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtc 210 |||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 957 ccgccgtcaacgacgaggttgtgcccgttgacatacttagcctcgtc 911 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 369 tgccgtgcggcgagatggcgttcacgcgcaccccgtggcg 408 ||||||||||||||||||||||||| |||| |||||||| Sbjct: 761 tgccgtgcggcgagatggcgttcacccgcaggccgtggcg 722
>dbj|AK070585.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023062B22, full insert sequence Length = 1159 Score = 69.9 bits (35), Expect = 8e-09 Identities = 44/47 (93%) Strand = Plus / Minus Query: 164 ccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtc 210 |||||||| ||||| ||||||||||||||||||||||| |||||||| Sbjct: 958 ccgccgtcaacgacgaggttgtgcccgttgacatacttagcctcgtc 912 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 369 tgccgtgcggcgagatggcgttcacgcgcaccccgtggcg 408 ||||||||||||||||||||||||| |||| |||||||| Sbjct: 762 tgccgtgcggcgagatggcgttcacccgcaggccgtggcg 723
>gb|DQ384223.1| Orthoclada laxa short-chain dehydrogenase/reductase gene, partial cds Length = 702 Score = 67.9 bits (34), Expect = 3e-08 Identities = 52/58 (89%) Strand = Plus / Minus Query: 190 gttgacatacttggcctcgtcggccgccaggtacacggcggccctggcgatgtcctcc 247 |||||| ||||||| |||||||| ||||||||||| || |||||||||||||||||| Sbjct: 702 gttgacgtacttggactcgtcggacgccaggtacagcgccgccctggcgatgtcctcc 645 Score = 50.1 bits (25), Expect = 0.007 Identities = 70/85 (82%) Strand = Plus / Minus Query: 377 ggcgagatggcgttcacgcgcaccccgtggcggcccagctccccggcgaacgcgcgcacg 436 |||||||||||||| |||||||| ||| ||| ||||||||||||| ||||||||| Sbjct: 518 ggcgagatggcgttgacgcgcacaccggagcgcgccagctccccggcagcggcgcgcacg 459 Query: 437 gcgccgatgacggcggccttggaga 461 |||||||| ||| ||||||||| Sbjct: 458 aggccgatgatggccaccttggaga 434
>dbj|AK105211.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-109-B08, full insert sequence Length = 613 Score = 67.9 bits (34), Expect = 3e-08 Identities = 91/110 (82%) Strand = Plus / Minus Query: 147 ccttgcccaccgtgcacccgccgtcgacgactaggttgtgcccgttgacatacttggcct 206 ||||||| || ||| | |||||||||||||| |||||||| ||| ||| ||||||||| Sbjct: 418 ccttgcctacagtgaagccgccgtcgacgacgaggttgtggccggtgatgaacttggcct 359 Query: 207 cgtcggccgccaggtacacggcggccctggcgatgtcctccacctccagc 256 |||||| ||||| | | ||||| ||||| || | ||| |||||||||||| Sbjct: 358 cgtcggacgccaagaagacggccgccctcgccacgtcttccacctccagc 309 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 372 cgtgcggcgagatggcgttcacgcgcaccccgt 404 ||||||||||||||| |||||| ||||| |||| Sbjct: 196 cgtgcggcgagatggtgttcacccgcacgccgt 164
>gb|DQ384222.1| Chasmanthium latifolium short-chain dehydrogenase/reductase gene, partial cds Length = 702 Score = 60.0 bits (30), Expect = 7e-06 Identities = 78/94 (82%) Strand = Plus / Minus Query: 377 ggcgagatggcgttcacgcgcaccccgtggcggcccagctccccggcgaacgcgcgcacg 436 |||||||||||||| |||||||| ||| ||| ||||||||||||| | || |||||| Sbjct: 518 ggcgagatggcgttgacgcgcacgccggagcgcgccagctccccggccacggcacgcacg 459 Query: 437 gcgccgatgacggcggccttggagatgccgtacg 470 ||||| |||||| |||||||||| || ||||| Sbjct: 458 aggccgacgacggccgccttggagacgctgtacg 425
>ref|XM_479433.1| Oryza sativa (japonica cultivar-group), mRNA Length = 864 Score = 56.0 bits (28), Expect = 1e-04 Identities = 55/64 (85%) Strand = Plus / Minus Query: 162 acccgccgtcgacgactaggttgtgcccgttgacatacttggcctcgtcggccgccaggt 221 |||||||||||||||| |||||||| ||| | || ||| |||||||||||| || |||| Sbjct: 823 acccgccgtcgacgacgaggttgtggccggtcacgtacctggcctcgtcggaggcgaggt 764 Query: 222 acac 225 |||| Sbjct: 763 acac 760 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 376 cggcgagatggcgttcacgcgcaccccgtggcg 408 |||||||||||||||||| |||| |||||||| Sbjct: 615 cggcgagatggcgttcacccgcaggccgtggcg 583
>gb|DQ384225.1| Pennisetum glaucum short-chain dehydrogenase/reductase gene, partial cds Length = 702 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Minus Query: 190 gttgacatacttggcctcgtcggccgccaggtacacggcggccctggcgatgtcctccac 249 |||||| ||||||| |||||||| ||||||||||| || ||||| || | |||||| | Sbjct: 702 gttgacgtacttggactcgtcggacgccaggtacagcgccgccctcgctacatcctccgc 643 Query: 250 ctccagcaccg 260 ||||||||||| Sbjct: 642 ctccagcaccg 632
>gb|AY108091.1| Zea mays PCO109491 mRNA sequence Length = 1206 Score = 52.0 bits (26), Expect = 0.002 Identities = 32/34 (94%) Strand = Plus / Minus Query: 392 acgcgcaccccgtggcggcccagctccccggcga 425 |||||||||||||||||||| |||||| |||||| Sbjct: 755 acgcgcaccccgtggcggccgagctccgcggcga 722
>dbj|AK068074.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132A21, full insert sequence Length = 4615 Score = 50.1 bits (25), Expect = 0.007 Identities = 25/25 (100%) Strand = Plus / Minus Query: 153 ccaccgtgcacccgccgtcgacgac 177 ||||||||||||||||||||||||| Sbjct: 522 ccaccgtgcacccgccgtcgacgac 498
>gb|DQ384224.1| Setaria italica short-chain dehydrogenase/reductase gene, partial cds Length = 702 Score = 48.1 bits (24), Expect = 0.028 Identities = 51/60 (85%) Strand = Plus / Minus Query: 377 ggcgagatggcgttcacgcgcaccccgtggcggcccagctccccggcgaacgcgcgcacg 436 |||||||||||||| |||||||||||| ||| ||| ||||||||| | ||||||||| Sbjct: 518 ggcgagatggcgttgacgcgcaccccggagcgcgccacctccccggccacggcgcgcacg 459
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 430 gcgcacggcgccgatgacggcggc 453 |||||||||||||||||||||||| Sbjct: 11075364 gcgcacggcgccgatgacggcggc 11075387
>dbj|AP005552.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1116_C03 Length = 112383 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 430 gcgcacggcgccgatgacggcggc 453 |||||||||||||||||||||||| Sbjct: 101171 gcgcacggcgccgatgacggcggc 101194
>dbj|AP005685.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0004P20 Length = 160410 Score = 48.1 bits (24), Expect = 0.028 Identities = 24/24 (100%) Strand = Plus / Plus Query: 430 gcgcacggcgccgatgacggcggc 453 |||||||||||||||||||||||| Sbjct: 34171 gcgcacggcgccgatgacggcggc 34194
>emb|AL732376.2|CNS08C8Z Oryza sativa chromosome 12, . BAC OSJNBa0086B10 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 152090 Score = 48.1 bits (24), Expect = 0.028 Identities = 30/32 (93%) Strand = Plus / Minus Query: 373 gtgcggcgagatggcgttcacgcgcaccccgt 404 ||||||||||||||||||||| ||||| |||| Sbjct: 15261 gtgcggcgagatggcgttcacccgcacaccgt 15230
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Minus Query: 148 cttgcccaccgtgcacccgccgtcgac 174 ||||||||||| ||||||||||||||| Sbjct: 2134283 cttgcccaccgcgcacccgccgtcgac 2134257
>gb|AY241675.1| Streptomyces mobaraensis transglutaminase (tgB1) gene, complete cds; and unknown genes Length = 3241 Score = 46.1 bits (23), Expect = 0.11 Identities = 26/27 (96%) Strand = Plus / Plus Query: 406 gcggcccagctccccggcgaacgcgcg 432 ||||||||||||||||||| ||||||| Sbjct: 3158 gcggcccagctccccggcgcacgcgcg 3184
>gb|AC126125.6| Rattus norvegicus 14 BAC CH230-25F8 (Children's Hospital Oakland Research Institute) complete sequence Length = 223844 Score = 44.1 bits (22), Expect = 0.43 Identities = 25/26 (96%) Strand = Plus / Minus Query: 40 tacacccgagctcagcagcattacta 65 |||||||| ||||||||||||||||| Sbjct: 94946 tacacccgcgctcagcagcattacta 94921
>emb|BX070298.1|CNS09QEM Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC7BD02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 818 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Plus Query: 251 tccagcaccgtcccgccgccca 272 |||||||||||||||||||||| Sbjct: 573 tccagcaccgtcccgccgccca 594
>emb|BX070297.1|CNS09QEL Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC7BD02 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 799 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 251 tccagcaccgtcccgccgccca 272 |||||||||||||||||||||| Sbjct: 499 tccagcaccgtcccgccgccca 478
>ref|XM_320004.2| Anopheles gambiae str. PEST ENSANGP00000010550 (ENSANGG00000008061), partial mRNA Length = 999 Score = 44.1 bits (22), Expect = 0.43 Identities = 22/22 (100%) Strand = Plus / Minus Query: 251 tccagcaccgtcccgccgccca 272 |||||||||||||||||||||| Sbjct: 536 tccagcaccgtcccgccgccca 515
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 0.43 Identities = 28/30 (93%) Strand = Plus / Plus Query: 248 acctccagcaccgtcccgccgcccatctcg 277 |||||||||||||||| |||||||| |||| Sbjct: 3075057 acctccagcaccgtccggccgcccagctcg 3075086 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 146 gccttgcccaccgtgcacccg 166 ||||||||||||||||||||| Sbjct: 2041154 gccttgcccaccgtgcacccg 2041174
>ref|NM_104787.2| Arabidopsis thaliana unknown protein AT1G61065 mRNA, complete cds Length = 860 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 aatcataacaacaatgaccta 41 ||||||||||||||||||||| Sbjct: 758 aatcataacaacaatgaccta 738
>gb|AY538588.1| Oryza sativa (japonica cultivar-group) alcohol dehydrogenase-like protein mRNA, partial cds Length = 262 Score = 42.1 bits (21), Expect = 1.7 Identities = 27/29 (93%) Strand = Plus / Minus Query: 167 ccgtcgacgactaggttgtgcccgttgac 195 ||||||||||| |||||||||||||||| Sbjct: 33 ccgtcgacgacggggttgtgcccgttgac 5
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome Length = 3402093 Score = 42.1 bits (21), Expect = 1.7 Identities = 24/25 (96%) Strand = Plus / Plus Query: 435 cggcgccgatgacggcggccttgga 459 |||||||| |||||||||||||||| Sbjct: 588087 cggcgccggtgacggcggccttgga 588111 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 376 cggcgagatggcgttcacgcgcaccccg 403 ||||| ||||||||| |||||||||||| Sbjct: 701701 cggcgcgatggcgttgacgcgcaccccg 701728
>gb|AC074085.7| Homo sapiens BAC clone RP11-3L10 from 7, complete sequence Length = 155260 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 239 atgtcctccacctccagcacc 259 ||||||||||||||||||||| Sbjct: 153278 atgtcctccacctccagcacc 153298
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 431 cgcacggcgccgatgacggcg 451 ||||||||||||||||||||| Sbjct: 3908490 cgcacggcgccgatgacggcg 3908510
>gb|AF419584.1|AF419584 Arabidopsis thaliana unknown protein mRNA, complete cds Length = 823 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 aatcataacaacaatgaccta 41 ||||||||||||||||||||| Sbjct: 721 aatcataacaacaatgaccta 701
>gb|DQ384228.1| Eragrostis tef short-chain dehydrogenase/reductase gene, partial cds Length = 702 Score = 42.1 bits (21), Expect = 1.7 Identities = 30/33 (90%) Strand = Plus / Minus Query: 392 acgcgcaccccgtggcggcccagctccccggcg 424 |||||||||||||| |||| |||||||||||| Sbjct: 521 acgcgcaccccgtgcgggccgagctccccggcg 489
>gb|AC018908.8|AC018908 Arabidopsis thaliana chromosome 1 BAC T7P1 genomic sequence, complete sequence Length = 102299 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Plus Query: 21 aatcataacaacaatgaccta 41 ||||||||||||||||||||| Sbjct: 85431 aatcataacaacaatgaccta 85451
>gb|AY086577.1| Arabidopsis thaliana clone 25888 mRNA, complete sequence Length = 795 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 21 aatcataacaacaatgaccta 41 ||||||||||||||||||||| Sbjct: 755 aatcataacaacaatgaccta 735
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.7 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 gcgcagcccgaaccgcgtcgc 366 ||||||||||||||||||||| Sbjct: 1873356 gcgcagcccgaaccgcgtcgc 1873336
>gb|CP000032.1| Silicibacter pomeroyi DSS-3 plasmid megaplasmid, complete sequence Length = 491611 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 336 ccgccagcccgcgcagcccg 355 |||||||||||||||||||| Sbjct: 160645 ccgccagcccgcgcagcccg 160626
>gb|AY549198.1| Streptomyces tubercidicus oxidoreductase (redLA1) gene, partial cds; and cytochrome P450 monooxygenase CYP107L3 (cypLA), O-methyltransferase (metLA1), O-methyltransferase (metLA2), and oxidoreductase (redLA2) genes, complete cds Length = 5427 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 333 gctccgccagcccgcgcagc 352 |||||||||||||||||||| Sbjct: 2704 gctccgccagcccgcgcagc 2685
>ref|XM_631874.1| Dictyostelium discoideum hypothetical protein (DDB0187709), partial mRNA Length = 633 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 18 attaatcataacaacaatgacctacacc 45 |||||||||||||||||| |||| |||| Sbjct: 586 attaatcataacaacaattaccttcacc 613
>ref|XM_512290.1| PREDICTED: Pan troglodytes similar to dipeptidyl peptidase-like protein 9 (LOC455608), mRNA Length = 3120 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 1066 cggccctggcgatgtactccacct 1043
>gb|AY301271.1| Homo sapiens lipocalin 10 (LCN10) mRNA, complete cds Length = 564 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gatgacggcggccttggaga 461 |||||||||||||||||||| Sbjct: 522 gatgacggcggccttggaga 503
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 379 cgagatggcgttcacgcgcacccc 402 |||||| ||||||||||||||||| Sbjct: 668748 cgagatcgcgttcacgcgcacccc 668725
>gb|AF542510.2| Homo sapiens dipeptidyl peptidase 9 long form (DPP9) mRNA, partial cds; alternatively spliced Length = 3006 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 1390 cggccctggcgatgtactccacct 1367
>gb|AY374518.1| Homo sapiens dipeptidylpeptidase 9 short form (DPP9) mRNA, complete cds; alternatively spliced Length = 2592 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 1066 cggccctggcgatgtactccacct 1043
>ref|NM_139159.3| Homo sapiens dipeptidyl-peptidase 9 (DPP9), mRNA Length = 4274 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 1431 cggccctggcgatgtactccacct 1408
>ref|NM_001001712.1| Homo sapiens lipocalin 10 (LCN10), mRNA Length = 564 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gatgacggcggccttggaga 461 |||||||||||||||||||| Sbjct: 522 gatgacggcggccttggaga 503
>ref|XM_542151.2| PREDICTED: Canis familiaris similar to Dipeptidyl peptidase 9 (Dipeptidyl peptidase IX) (DP9) (Dipeptidyl peptidase-like protein 9) (DPLP9) (Dipeptidyl peptidase IV-related protein 2) (DPRP-2), transcript variant 1 (LOC485033), mRNA Length = 2996 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 1470 cggccctggcgatgtactccacct 1447
>ref|XM_863385.1| PREDICTED: Canis familiaris similar to Dipeptidyl peptidase 9 (Dipeptidyl peptidase IX) (DP9) (Dipeptidyl peptidase-like protein 9) (DPLP9) (Dipeptidyl peptidase IV-related protein 2) (DPRP-2), transcript variant 4 (LOC485033), mRNA Length = 2999 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 1470 cggccctggcgatgtactccacct 1447
>ref|XM_863382.1| PREDICTED: Canis familiaris similar to Dipeptidyl peptidase 9 (Dipeptidyl peptidase IX) (DP9) (Dipeptidyl peptidase-like protein 9) (DPLP9) (Dipeptidyl peptidase IV-related protein 2) (DPRP-2), transcript variant 3 (LOC485033), mRNA Length = 2972 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 1470 cggccctggcgatgtactccacct 1447
>ref|XM_863378.1| PREDICTED: Canis familiaris similar to Dipeptidyl peptidase 9 (Dipeptidyl peptidase IX) (DP9) (Dipeptidyl peptidase-like protein 9) (DPLP9) (Dipeptidyl peptidase IV-related protein 2) (DPRP-2), transcript variant 2 (LOC485033), mRNA Length = 2849 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 1470 cggccctggcgatgtactccacct 1447
>gb|BC026910.1| Homo sapiens lipocalin 6, mRNA (cDNA clone IMAGE:4478857), with apparent retained intron Length = 2436 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gatgacggcggccttggaga 461 |||||||||||||||||||| Sbjct: 1020 gatgacggcggccttggaga 1001
>emb|AL355987.31| Human DNA sequence from clone RP11-216L13 on chromosome 9 Contains the 3' end of the gene for a novel protein similar to mouse pancreatitis-induced protein 49 (PIP49), the 5' end of a novel gene (FLJ30346), five novel genes (containing LOC158062, KIAA1984, FLJ35320, FLJ36901, FLJ30985, FLJ10101, FLJ37063 FLJ13045, FLJ40767), a nucleolin (NCL) pseudogene, the gene for a novel protein similar to mouse lipocalin 8 (EP17, Lcn5), a 13kD lysosomal H+ transporting ATPase V1 subunit G isoform 1 (ATP6V1G1) pseudogene, the gene for phosphohistidine phosphatase (PHP14), the gene for a novel protein similar to rat apical early endosomal glycoprotein (LOC252882), the EDF1 gene for endothelial differentiation-related factor 1 (MBF1, EDF-1), the 5' end of the TRAF2 gene for TNF receptor-associated factor 2 (TRAP, TRAP3) and ten CpG islands, complete sequence Length = 182003 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 442 gatgacggcggccttggaga 461 |||||||||||||||||||| Sbjct: 18448 gatgacggcggccttggaga 18467
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 330 acagctccgccagcccgcgcagcc 353 ||||||||||||| |||||||||| Sbjct: 339351 acagctccgccaggccgcgcagcc 339328
>emb|BX640449.1| Bordetella bronchiseptica strain RB50, complete genome; segment 13/16 Length = 348074 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 cgcaccccgtggcggcccagctcc 418 ||||| |||||||||||||||||| Sbjct: 156164 cgcacgccgtggcggcccagctcc 156141
>emb|BX640434.1| Bordetella parapertussis strain 12822, complete genome; segment 12/14 Length = 344805 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 395 cgcaccccgtggcggcccagctcc 418 ||||| |||||||||||||||||| Sbjct: 108835 cgcacgccgtggcggcccagctcc 108812
>emb|CR627380.1| Homo sapiens mRNA; cDNA DKFZp762F117 (from clone DKFZp762F117) Length = 3128 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 186 cggccctggcgatgtactccacct 163
>emb|AL834376.1|HSM805448 Homo sapiens mRNA; cDNA DKFZp762M2413 (from clone DKFZp762M2413) Length = 3243 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 442 cggccctggcgatgtactccacct 419
>gb|DQ417928.1| Homo sapiens dipeptidyl peptidase 9 (DPP9) mRNA, complete cds Length = 2679 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 1153 cggccctggcgatgtactccacct 1130
>emb|AL832485.1|HSM803793 Homo sapiens mRNA; cDNA DKFZp686P2319 (from clone DKFZp686P2319) Length = 2275 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gatgacggcggccttggaga 461 |||||||||||||||||||| Sbjct: 858 gatgacggcggccttggaga 839
>dbj|AK131499.1| Homo sapiens cDNA FLJ16702 fis, clone TRACH3007866, moderately similar to Homo sapiens dipeptidylpeptidase 8 (DPP8) Length = 3660 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 924 cggccctggcgatgtactccacct 901
>dbj|AK122654.1| Homo sapiens cDNA FLJ16087 fis, clone NT2RP7006263, moderately similar to Homo sapiens dipeptidyl peptidase 8 (DPP8) mRNA Length = 3715 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 1414 cggccctggcgatgtactccacct 1391
>dbj|AK122645.1| Homo sapiens cDNA FLJ16073 fis, clone KIDNE2008048, moderately similar to Homo sapiens dipeptidyl peptidase 8 (DPP8) mRNA Length = 2767 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 461 cggccctggcgatgtactccacct 438
>emb|CR612208.1| full-length cDNA clone CS0DC015YH08 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1984 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 1318 cggccctggcgatgtactccacct 1295
>dbj|AK091788.1| Homo sapiens cDNA FLJ34469 fis, clone HLUNG2003331 Length = 2496 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gatgacggcggccttggaga 461 |||||||||||||||||||| Sbjct: 1105 gatgacggcggccttggaga 1086
>emb|CR604042.1| full-length cDNA clone CS0DL008YE06 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1874 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 1381 cggccctggcgatgtactccacct 1358
>emb|CR603620.1| full-length cDNA clone CS0DL012YL01 of B cells (Ramos cell line) Cot 25-normalized of Homo sapiens (human) Length = 1992 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 1311 cggccctggcgatgtactccacct 1288
>gb|DQ384226.1| Pharus lappulaceus short-chain dehydrogenase/reductase gene, partial cds Length = 696 Score = 40.1 bits (20), Expect = 6.8 Identities = 38/44 (86%) Strand = Plus / Minus Query: 377 ggcgagatggcgttcacgcgcaccccgtggcggcccagctcccc 420 ||||||||||| ||||| ||||| | |||||| |||||||||| Sbjct: 515 ggcgagatggcattcacccgcacgctgtggcgcgccagctcccc 472
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 474 gcccgacgatgccgcccagc 493 |||||||||||||||||||| Sbjct: 4020909 gcccgacgatgccgcccagc 4020928
>emb|BX817753.1|CNS0ACEX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL3ZC12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 800 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 atcataacaacaatgaccta 41 |||||||||||||||||||| Sbjct: 763 atcataacaacaatgaccta 744
>gb|AE004815.1| Pseudomonas aeruginosa PAO1, section 376 of 529 of the complete genome Length = 10254 Score = 40.1 bits (20), Expect = 6.8 Identities = 26/28 (92%) Strand = Plus / Plus Query: 234 tggcgatgtcctccacctccagcaccgt 261 ||||| ||||||||||| |||||||||| Sbjct: 5120 tggcgttgtcctccaccaccagcaccgt 5147
>ref|XM_225997.3| PREDICTED: Rattus norvegicus protocadherin 1 (cadherin-like 1) (predicted) (Pcdh1_predicted), mRNA Length = 3852 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 121 tcccgccggcgccggcttgt 140 |||||||||||||||||||| Sbjct: 85 tcccgccggcgccggcttgt 104
>gb|AY172660.1| Homo sapiens dipeptidyl peptidase IV-related protein-2 (DPRP2) mRNA, complete cds Length = 2602 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 1076 cggccctggcgatgtactccacct 1053
>gb|AF452102.2| Homo sapiens dipeptidyl peptidase-like protein 9 mRNA, complete cds Length = 4295 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 1431 cggccctggcgatgtactccacct 1408
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 439 gccgatgacggcggccttgg 458 |||||||||||||||||||| Sbjct: 3800297 gccgatgacggcggccttgg 3800316
>gb|AC005783.1|AC005783 Homo sapiens chromosome 19, cosmid R33083, complete sequence Length = 43501 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 264 cggccctggcgatgtactccacct 287
>dbj|AK131100.1| Homo sapiens mRNA for FLJ00334 protein Length = 4257 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 980 cggccctggcgatgtactccacct 957
>gb|BC037948.2| Homo sapiens dipeptidyl-peptidase 9, mRNA (cDNA clone MGC:20952 IMAGE:4577856), complete cds Length = 4223 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 1348 cggccctggcgatgtactccacct 1325
>gb|BC036875.1| Homo sapiens lipocalin 10, mRNA (cDNA clone IMAGE:5223389) Length = 1720 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gatgacggcggccttggaga 461 |||||||||||||||||||| Sbjct: 219 gatgacggcggccttggaga 200
>gb|BC046377.1| Homo sapiens lipocalin 10, mRNA (cDNA clone IMAGE:5762703) Length = 1961 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gatgacggcggccttggaga 461 |||||||||||||||||||| Sbjct: 147 gatgacggcggccttggaga 128
>gb|BC040963.1| Homo sapiens lipocalin 10, mRNA (cDNA clone IMAGE:5588100) Length = 3292 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 442 gatgacggcggccttggaga 461 |||||||||||||||||||| Sbjct: 1862 gatgacggcggccttggaga 1843
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 151 gcccaccgtgcacccgccgtcgac 174 |||||||| ||||||||||||||| Sbjct: 4435477 gcccaccgcgcacccgccgtcgac 4435500
>gb|AC005594.1|AC005594 Homo sapiens chromosome 19, cosmid R26894, complete sequence Length = 39514 Score = 40.1 bits (20), Expect = 6.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 228 cggccctggcgatgtcctccacct 251 ||||||||||||||| |||||||| Sbjct: 37974 cggccctggcgatgtactccacct 37997
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 6.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 435 cggcgccgatgacggcggcc 454 |||||||||||||||||||| Sbjct: 4921918 cggcgccgatgacggcggcc 4921937 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,005,702 Number of Sequences: 3902068 Number of extensions: 3005702 Number of successful extensions: 68868 Number of sequences better than 10.0: 104 Number of HSP's better than 10.0 without gapping: 107 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 66534 Number of HSP's gapped (non-prelim): 2330 length of query: 501 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 479 effective length of database: 17,147,199,772 effective search space: 8213508690788 effective search space used: 8213508690788 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
