>TRUA_BARHE (Q6G547) tRNA pseudouridine synthase A (EC 5.4.99.12) (tRNA-uridine|
           isomerase I) (tRNA pseudouridylate synthase I)
          Length = 247

 Score = 27.7 bits (60), Expect = 8.3
 Identities = 13/25 (52%), Positives = 17/25 (68%)
 Frame = +1

Query: 118 SISSALKTAQEHLLGEQLQLTTIGR 192
           +I SAL+ A  H  G+QL +TT GR
Sbjct: 26  TIQSALEQALFHFSGQQLTITTAGR 50


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,305,120
Number of Sequences: 219361
Number of extensions: 407931
Number of successful extensions: 853
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 851
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 853
length of database: 80,573,946
effective HSP length: 55
effective length of database: 68,509,091
effective search space used: 1644218184
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)