>NLTP2_PRUAR (P82353) Nonspecific lipid-transfer protein 2 (LTP 2)|
          Length = 68

 Score = 65.5 bits (158), Expect = 3e-11
 Identities = 24/43 (55%), Positives = 35/43 (81%)
 Frame = -3

Query: 391 CSKMREQQPCMCQYARDPNLKQYVDSPNGKKVMAACKVPVPSC 263
           C K+REQ+PC+C Y ++P+L+QYV+SPN +K+ + C VPVP C
Sbjct: 26  CQKLREQRPCLCGYLKNPSLRQYVNSPNARKLASNCGVPVPQC 68

>NLTP_VIGUN (Q43681) Probable nonspecific lipid-transfer protein AKCS9|
           precursor (LTP)
          Length = 99

 Score = 62.0 bits (149), Expect = 3e-10
 Identities = 23/43 (53%), Positives = 34/43 (79%)
 Frame = -3

Query: 391 CSKMREQQPCMCQYARDPNLKQYVDSPNGKKVMAACKVPVPSC 263
           CSK++ Q+PC+C Y ++P+LKQYV+SP  KKV++ C V  P+C
Sbjct: 57  CSKLKVQEPCLCNYIKNPSLKQYVNSPGAKKVLSNCGVTYPNC 99

>NLTPX_ORYSA (P83210) Nonspecific lipid-transfer protein 2 (nsLTP2) (7 kDa lipid|
           transfer protein)
          Length = 69

 Score = 57.0 bits (136), Expect = 1e-08
 Identities = 20/43 (46%), Positives = 32/43 (74%)
 Frame = -3

Query: 391 CSKMREQQPCMCQYARDPNLKQYVDSPNGKKVMAACKVPVPSC 263
           CS +R QQ C CQ+A+DP   +YV+SPN +K +++C + +P+C
Sbjct: 26  CSSLRAQQGCFCQFAKDPRYGRYVNSPNARKAVSSCGIALPTC 68

>NLTP2_MAIZE (P83506) Probable nonspecific lipid-transfer protein 2 (LTP 2)|
          Length = 70

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 20/43 (46%), Positives = 29/43 (67%)
 Frame = -3

Query: 391 CSKMREQQPCMCQYARDPNLKQYVDSPNGKKVMAACKVPVPSC 263
           C+++R QQ C+C YAR PN   Y+ SPN  ++ A C +P+P C
Sbjct: 27  CAQLRAQQGCLCGYARSPNYGSYIRSPNAARLFAICNLPMPRC 69

>NLTP2_HORVU (P20145) Probable nonspecific lipid-transfer protein precursor|
           (LTP) (Aleurone-specific 10 kDa protein) (B-FABP)
          Length = 102

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 20/43 (46%), Positives = 27/43 (62%)
 Frame = -3

Query: 391 CSKMREQQPCMCQYARDPNLKQYVDSPNGKKVMAACKVPVPSC 263
           C  +R QQ C+CQY +DPN   YV SP+ +  +  C +PVP C
Sbjct: 60  CGNLRAQQGCLCQYVKDPNYGHYVSSPHARDTLNLCGIPVPHC 102

>NLT2P_WHEAT (P82901) Nonspecific lipid-transfer protein 2P (LTP2P) (Lipid|
           transfer protein 2 isoform 2) (LTP2-2) (7 kDa lipid
           transfer protein 2)
          Length = 67

 Score = 55.5 bits (132), Expect = 3e-08
 Identities = 20/43 (46%), Positives = 28/43 (65%)
 Frame = -3

Query: 391 CSKMREQQPCMCQYARDPNLKQYVDSPNGKKVMAACKVPVPSC 263
           C  +R QQPC CQYA+DP   QY+ SP+ +  + +C + VP C
Sbjct: 25  CGNLRAQQPCFCQYAKDPTYGQYIRSPHARDTLQSCGLAVPHC 67

>NLT2G_WHEAT (P82900) Nonspecific lipid-transfer protein 2G (LTP2G) (Lipid|
           transfer protein 2 isoform 1) (LTP2-1) (7 kDa lipid
           transfer protein 1)
          Length = 67

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 19/43 (44%), Positives = 27/43 (62%)
 Frame = -3

Query: 391 CSKMREQQPCMCQYARDPNLKQYVDSPNGKKVMAACKVPVPSC 263
           C  +R QQ C CQYA+DP   QY+ SP+ +  + +C + VP C
Sbjct: 25  CGNLRAQQGCFCQYAKDPTYGQYIRSPHARDTLTSCGLAVPHC 67

>POLN_SINDV (P03317) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2512

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 367  PCMCQYARDPNLKQYVDSPNGKKVMAACKVPVP 269
            PC+C YA  P     + S N K+V      P+P
Sbjct: 1609 PCLCMYAMTPERVHRLRSNNVKEVTVCSSTPLP 1641

>POLN_SINDO (P27283) Nonstructural polyprotein (Polyprotein nsP1234) (P1234)|
            [Contains: P123; P123'; mRNA capping enzyme nsP1 (EC
            2.1.1.-) (EC 2.7.7.-) (Nonstructural protein 1);
            Protease/triphosphatase/NTPase/helicase nsP2 (EC
            3.4.22.-) (EC 3.1.3.33) (EC
          Length = 2514

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = -3

Query: 367  PCMCQYARDPNLKQYVDSPNGKKVMAACKVPVP 269
            PC+C YA  P     + S N K+V      P+P
Sbjct: 1609 PCLCMYAMTPERVHRLRSNNVKEVTVCSSTPLP 1641

>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 14/43 (32%), Positives = 18/43 (41%)
 Frame = +3

Query: 3   HKERHENVHATGRNI*ITYSWIHHHYCVYSEI*IHIGPQLHIH 131
           H+E H + HA        + W HHH+  Y     H  P  H H
Sbjct: 145 HEEHHHHHHAAHH-----HPWFHHHHLGYHH---HHAPHHHHH 179

>TIM_DROHY (O44431) Protein timeless (Fragment)|
          Length = 676

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 16/61 (26%), Positives = 27/61 (44%)
 Frame = -1

Query: 303 RRSXXXXXXXXXXXXWTHI*SIHTGERSAHAGLFVLSLHVSCVFMCQCFPTQSSYPDDVC 124
           RR+             +H+ ++  G++S+HAG   L+    C    +C  +QS   D  C
Sbjct: 280 RRNTLSEMLSDNYTSHSHVSAVKLGQKSSHAGQLQLTKGKCCPQKRECPSSQSELSD--C 337

Query: 123 G 121
           G
Sbjct: 338 G 338

>NUM1_YEAST (Q00402) Nuclear migration protein NUM1|
          Length = 2748

 Score = 28.5 bits (62), Expect = 4.1
 Identities = 17/49 (34%), Positives = 25/49 (51%)
 Frame = -2

Query: 281  GARALLLDGRIYDRSIRESAAPTRAFLSSRCMFHVCSCVSVSQHNLATL 135
            G   +L+D   YD +IR+   PTR  L   C  H  + V + Q+  +TL
Sbjct: 1771 GMNKILVDQIEYDETIRKCNHPTRMELEESC--HHLNLVLLDQNEYSTL 1817

>DPOLA_MOUSE (P33609) DNA polymerase alpha catalytic subunit (EC 2.7.7.7)|
          Length = 1465

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 18/68 (26%), Positives = 29/68 (42%)
 Frame = -1

Query: 231 GERSAHAGLFVLSLHVSCVFMCQCFPTQSSYPDDVCGVVDRCVSKFLNIRNNGDVSSYM* 52
           GER+A  G  +  + +S   +  C     S         +R V    NIRN    SSY+ 
Sbjct: 684 GERNATCGRMICDVEISAKELIHCKSYHLSELVQQILKTERIVIPTENIRNMYSESSYLL 743

Query: 51  FICFFLWR 28
           ++   +W+
Sbjct: 744 YLLEHIWK 751

>KCMB2_RAT (Q811Q0) Calcium-activated potassium channel beta subunit 2|
           (Calcium-activated potassium channel, subfamily M, beta
           subunit 2) (Maxi K channel beta subunit 2) (BK channel
           beta subunit 2) (Slo-beta 2) (K(VCA)beta 2)
           (Charybdotoxin receptor beta
          Length = 235

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 130 CMWSCGPMCI*ISEYTQ*W*CIQLYV 53
           C +SCGP C  +S+Y     C+Q+YV
Sbjct: 97  CSFSCGPDCWKLSQYP----CLQVYV 118

>KCMB2_MOUSE (Q9CZM9) Calcium-activated potassium channel beta subunit 2|
           (Calcium-activated potassium channel, subfamily M, beta
           subunit 2) (Maxi K channel beta subunit 2) (BK channel
           beta subunit 2) (Slo-beta 2) (K(VCA)beta 2)
           (Charybdotoxin receptor bet
          Length = 235

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 130 CMWSCGPMCI*ISEYTQ*W*CIQLYV 53
           C +SCGP C  +S+Y     C+Q+YV
Sbjct: 97  CSFSCGPDCWKLSQYP----CLQVYV 118

>KCMB2_HUMAN (Q9Y691) Calcium-activated potassium channel beta subunit 2|
           (Calcium-activated potassium channel, subfamily M, beta
           subunit 2) (Maxi K channel beta subunit 2) (BK channel
           beta subunit 2) (Slo-beta 2) (K(VCA)beta 2)
           (Charybdotoxin receptor bet
          Length = 235

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = -3

Query: 130 CMWSCGPMCI*ISEYTQ*W*CIQLYV 53
           C +SCGP C  +S+Y     C+Q+YV
Sbjct: 97  CSFSCGPDCWKLSQYP----CLQVYV 118

>MUSK_CHICK (Q8AXY6) Muscle, skeletal receptor tyrosine protein kinase|
           precursor (EC 2.7.10.1) (Muscle-specific tyrosine
           protein kinase receptor) (Muscle-specific kinase
           receptor) (MuSK)
          Length = 947

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 4/51 (7%)
 Frame = -3

Query: 352 YARDPNLKQYVDSPNGKKVMAACKVPVPSC*MDAYM----IDPYGRAQRPR 212
           + R+  L    D+PN  K++  C V  P C +  YM    ++ Y R + PR
Sbjct: 703 FQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEYLRDRSPR 753

>PUS3_YEAST (P31115) tRNA pseudouridine synthase 3 (EC 5.4.99.-) (tRNA-uridine|
           isomerase 3) (tRNA pseudouridylate synthase 3)
           (Depressed growth-rate protein DEG1)
          Length = 442

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 14/29 (48%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
 Frame = +3

Query: 303 LPLGESTYCLRL-GSRAYWHMQGCCSLIL 386
           LPL E+ YC  L GS   WH   C   IL
Sbjct: 274 LPLSETFYCFDLVGSAFLWHQVRCMMAIL 302

>Y4ZA_RHISN (P55728) Hypothetical 32.9 kDa protein y4zA|
          Length = 295

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 12/22 (54%), Positives = 16/22 (72%)
 Frame = -2

Query: 308 RQEGHGRLQGARALLLDGRIYD 243
           R  G+GRL GA A ++ GR+YD
Sbjct: 56  RLVGYGRLVGAEATVVLGRLYD 77


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 57,000,681
Number of Sequences: 219361
Number of extensions: 1170632
Number of successful extensions: 2675
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 2637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2675
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 1375720320
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)