>MEN1_HUMAN (O00255) Menin|
          Length = 615

 Score = 32.3 bits (72), Expect = 0.81
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = -1

Query: 526 PPRRCPTTATTSTRGPK*GSSRGCPSSAATP 434
           PPR+ P T   + RGP+ GS+   P+ AA+P
Sbjct: 519 PPRKPPGTVAGTARGPEGGSTAQVPAPAASP 549

>NU2M_PARHE (Q85PQ0) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 2)
          Length = 347

 Score = 32.0 bits (71), Expect = 1.1
 Identities = 20/70 (28%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = -1

Query: 241 AEMLWISAILMYRHLIS*YLYVVWSRLHLDV-ALVMHTRPLTRFLSSSFWPKLPWSQTCL 65
           A M W+S IL+Y   +     +++  + L    L MH    T    S  W K+P   + +
Sbjct: 185 AHMGWMSTILIYNPTMMLLNLIIYIMMTLSTFMLFMHNSTTTTLALSQTWNKMPLITSLI 244

Query: 64  RMVILPLSQL 35
            M++L L  L
Sbjct: 245 LMLMLSLGGL 254

>YIS7_YEAST (P40566) Hypothetical 87.0 kDa protein in PAN1-PRI1 intergenic|
           region
          Length = 764

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 24/81 (29%), Positives = 34/81 (41%)
 Frame = -1

Query: 523 PRRCPTTATTSTRGPK*GSSRGCPSSAATPCTDAAIHSPSATIFFLYTAMRILFESVAPF 344
           P    T A+ ST   K GSS+  P S   P     + SPS T+    +  R L   + PF
Sbjct: 599 PSPASTVASVSTSTSKSGSSQ--PPSFIKPDNHLDLDSPSCTLKSDLSGFRALDAIMRPF 656

Query: 343 LVYLREDRISLCLANICRLNY 281
            + +   R      N+C  +Y
Sbjct: 657 PIQI-HGRFEFAEFNLCNKSY 676

>JHD2C_MOUSE (Q69ZK6) Probable JmjC domain-containing histone demethylation|
            protein 2C (EC 1.14.11.-) (Jumonji domain-containing
            protein 1C)
          Length = 2350

 Score = 30.4 bits (67), Expect = 3.1
 Identities = 25/96 (26%), Positives = 40/96 (41%)
 Frame = +1

Query: 43   TEEVSPSSNMFETKATWARKTS*GT*SAAVCA*LKPHPSANETKQHIGTTKSGGDTSKSH 222
            TE    ++N+   KA W  + S G   AAV + +   PS+ +    + +  S    SK  
Sbjct: 1084 TEMWRSNNNLNREKAEWPVEKSSGKSQAAVASVIVRPPSSTK----VDSVPSVPLASKDR 1139

Query: 223  *SKAFQHHLNLSDYLHEHDSSSGGICLQGISLSGPH 330
              +      N +DYL      +G I L  ++L   H
Sbjct: 1140 VCERSSSGANKTDYLKPEAGETGRIILPNVNLESAH 1175

>NU2M_PHOVI (Q00540) NADH-ubiquinone oxidoreductase chain 2 (EC 1.6.5.3) (NADH|
           dehydrogenase subunit 2)
          Length = 347

 Score = 29.6 bits (65), Expect = 5.3
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = -1

Query: 241 AEMLWISAILMYRHLIS*YLYVVWSRLHLDV-ALVMHTRPLTRFLSSSFWPKLPWSQTCL 65
           A M W++ IL Y   +      ++  + L    L MH    T    S+ W KLP   + +
Sbjct: 185 AHMGWMTVILTYNPTLMVLNLTIYITMTLSTFMLFMHNSSTTTLSLSNTWNKLPLMTSLI 244

Query: 64  RMVILPLSQL 35
            M+++ L  L
Sbjct: 245 LMLMMSLGGL 254

>ABL_DROME (P00522) Tyrosine-protein kinase Abl (EC 2.7.10.2) (Abelson|
           protein) (D-ash)
          Length = 1620

 Score = 29.3 bits (64), Expect = 6.9
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +1

Query: 265 LHEHDSSSGGICLQGISLSGPHAN 336
           L +H   SGG+ LQG SL G H++
Sbjct: 139 LQQHQQDSGGLGLQGSSLGGGHSS 162

>ISP3_SCHPO (P40899) Sexual differentiation process protein isp3 (Meiotic|
           expression up-regulated protein 4)
          Length = 182

 Score = 28.9 bits (63), Expect = 9.0
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -1

Query: 520 RRCPTTATTSTRGPK*GSSRGCPSSAATPCTDAAIHSPSA 401
           R CP   T  T  P   ++   P++AATP T AA  +P+A
Sbjct: 142 RTCPDPLTGIT--PAVAAAAATPAAAATPATPAAAATPAA 179


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,603,311
Number of Sequences: 219361
Number of extensions: 1378056
Number of successful extensions: 3371
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3288
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3371
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 3970331829
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)