ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart41d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Trit... 617 e-173
2gb|AF117660.1|AF117660 Triticum aestivum S-adenosylmethionine de... 565 e-158
3ref|XM_473046.1| Oryza sativa (japonica cultivar-group), predic... 62 2e-06
4emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clon... 62 2e-06
5emb|Y07766.2|OSSADMEDC O.sativa mRNA for S-adenosylmethionine de... 62 2e-06
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
7gb|AY966487.1| Oryza sativa (indica cultivar-group) S-adenosylme... 62 2e-06
8gb|AF067194.1|AF067194 Oryza sativa S-adenosylmethionine decarbo... 62 2e-06
9dbj|AK100589.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
10dbj|AK098918.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
11dbj|AK072162.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
12dbj|AK067166.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
13dbj|AK062001.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
14emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4,... 62 2e-06
15emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 56 1e-04
16gb|BT018615.1| Zea mays clone EL01N0501D02.d mRNA sequence 50 0.007
17gb|BT016840.1| Zea mays clone Contig673 mRNA sequence 50 0.007
18emb|Y07767.1|ZMSADMEDC Z.mays mRNA for S-adenosylmethionine deca... 50 0.007
19gb|AY103590.1| Zea mays PCO098412 mRNA sequence 50 0.007
20dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
21dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.11
22dbj|AB122089.1| Oryza sativa (japonica cultivar-group) SAMDC1 g... 46 0.11
23emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-gluc... 46 0.11
24dbj|AK102445.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
25dbj|AK101535.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
26dbj|AK100397.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
27dbj|AK067682.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.11
28ref|XM_960781.1| Encephalitozoon cuniculi GB-M1 hypothetical pro... 44 0.43
29emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephal... 44 0.43
30gb|AY032614.1| Triticum aestivum receptor-like kinase (Wrlk-S3-9... 44 0.43
31gb|AF325197.1|AF325197 Triticum aestivum LRK33 (Lrk33) and TAK33... 44 0.43
32gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (L... 44 0.43
33emb|CR847994.10| Zebrafish DNA sequence from clone CH211-203H15 ... 44 0.43
34gb|AC125203.3| Mus musculus BAC clone RP23-233M21 from 19, compl... 42 1.7
35emb|AL591979.1| Listeria monocytogenes strain EGD, complete geno... 42 1.7
36dbj|AB023064.1| Listeria monocytogenes DNA for DnaK operon, comp... 42 1.7
37ref|XM_468482.1| Oryza sativa (japonica cultivar-group), mRNA 40 6.7
38emb|AL158077.15| Human DNA sequence from clone RP11-471J7 on chr... 40 6.7
39emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genom... 40 6.7
40emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete ... 40 6.7
41dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
42gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome 40 6.7
43dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.7
44emb|AJ698342.1| Megathura crenulata KLH2 gene for hemocyanin 2, ... 40 6.7
45emb|AL591222.2|HS378I6 Homo sapiens chromosome 9 BAC RP11-378I6,... 40 6.7 
>emb|X83881.1|HCTTSAMDC H.chilense x T.turgidum conv. durum (Tritordeum) mRNA for
            S-adenosylmethionine decarboxylase
          Length = 1893

 Score =  617 bits (311), Expect = e-173
 Identities = 450/494 (91%), Gaps = 18/494 (3%)
 Strand = Plus / Minus

                                                                        
Query: 13   tgcttatttataagttgtgacagattttctccaaacagtacgctcattgtggcagacgca 72
            ||||||||||||||||||| ||  | |||||||||||||| |||||||||||||||||||
Sbjct: 1885 tgcttatttataagttgtgccaactcttctccaaacagtatgctcattgtggcagacgca 1826

                                                                        
Query: 73   gcaaaccacctagagctaatagtttattcagagtagcaatagcctggccggctgcttcac 132
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1825 gcaaaccacctagagctaatagtttattcagagtagcaatagcctggccggctgcttcac 1766

                                                                        
Query: 133  agtaaccaaaacgacaaacggaa---gtcagaacgaattccacagacggaacagcgacag 189
            |||||||||| ||||  |||  |   ||||||||||||| ||||||||||||||||||||
Sbjct: 1765 agtaaccaaa-cgacgcacgacaacagtcagaacgaattacacagacggaacagcgacag 1707

                                                                        
Query: 190  caaaaatcatcttatcactcgcacagcaccgcgcc------ctcctccagagaatcctcc 243
            ||||  |||||||||||||||||||||| ||||||      |||||| ||||| ||||||
Sbjct: 1706 caaa--tcatcttatcactcgcacagcaacgcgcctgtgccctcctcgagagactcctcc 1649

                                                                        
Query: 244  tccgcccgccatgcgagcaggttggcaagcttgccttccttgaccagagggtggccgctc 303
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1648 tccgcccgccatgcgagcaggttggcaagcttgccttccttgaccagagggtggccgctc 1589

                                                                        
Query: 304  tccacattctcgccctcgaagcagtggaagacggacctgggcgacccggcggagacagca 363
            ||||||||||||      |||||||||||||| ||||||||||||||||| |||||||||
Sbjct: 1588 tccacattctcg------aagcagtggaagacagacctgggcgacccggcagagacagca 1535

                                                                        
Query: 364  acctcttcattcgcggtaaagttctggtagatgaggacgcccccgcaggggagctcctgc 423
            | |||||| ||||||| |||| ||||||||||||||||||| ||||| || |||||||||
Sbjct: 1534 agctcttcgttcgcggcaaagctctggtagatgaggacgccaccgcatggcagctcctgc 1475

                                                                        
Query: 424  tccacgatgttgttgcagtcgtatgcctcggcgtcgagcttcttgccccaggtggcggcg 483
            ||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 1474 tccacaacgttgttgcagtcgtatgcctcggcgtcgagcttcttgccccaggtggcggca 1415

                          
Query: 484  tggccgcggccacc 497
            ||||| ||||||||
Sbjct: 1414 tggccacggccacc 1401
to top
>gb|AF117660.1|AF117660 Triticum aestivum S-adenosylmethionine decarboxylase precursor, mRNA,
            complete cds
          Length = 1386

 Score =  565 bits (285), Expect = e-158
 Identities = 392/422 (92%), Gaps = 8/422 (1%)
 Strand = Plus / Minus

                                                                        
Query: 77   accacctagagctaatagtttattcagagtagcaatagcctggccggctgcttcacagta 136
            ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1378 accacctagagctaatagtttattcagag-agcaatagcctggccggctgcttcacagta 1320

                                                                        
Query: 137  accaaaacgacaaacgga-agtcagaacgaattccacagacggaacagcgacagcaaaaa 195
            |||||| |||||||| || ||||||||| ||||||||||| |||| ||||||||||||  
Sbjct: 1319 accaaa-cgacaaactgacagtcagaacaaattccacagatggaatagcgacagcaaa-- 1263

                                                                        
Query: 196  tcatcttatcactcgcacagcaccgcgccctcctccagagaatcctcctccgcccgccat 255
            |||| |  |||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1262 tcatgtcttcactcgcacagcaccgcgccctcttccagagaatcctcctccgcccgccat 1203

                                                                        
Query: 256  gcgagcaggttggcaagcttgccttccttgaccagagggtggccgctctccacattctcg 315
            ||||| |||||||| |||||||||||||||||||||||||||| |   | |||| |||||
Sbjct: 1202 gcgaggaggttggcgagcttgccttccttgaccagagggtggctg---tgcacactctcg 1146

                                                                        
Query: 316  ccctcgaagcagtggaagacggacctgggcgacccggcggagacagcaacctcttcattc 375
             ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct: 1145 gcctcgaagcagtggaagacggacctgggcgacccggcagagacagcaacctcttcgttc 1086

                                                                        
Query: 376  gcggtaaagttctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttg 435
             |||||||| ||||||||||||||||||| || |||||||||||||||||||| | ||||
Sbjct: 1085 acggtaaagctctggtagatgaggacgcctccacaggggagctcctgctccacaacgttg 1026

                                                                        
Query: 436  ttgcagtcgtatgcctcggcgtcgagcttcttgccccaggtggcggcgtggccgcggcca 495
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1025 ttgcagtcgtatgcctcggcgtcgagcttcttgccccaggtggcggcgtggccgcggcca 966

              
Query: 496  cc 497
            ||
Sbjct: 965  cc 964
to top
>ref|XM_473046.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1197

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                   
Query: 386  tctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 440
            ||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1021 tctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 967
to top
>emb|AL606594.4| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0029H02,
             complete sequence
          Length = 173171

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                    
Query: 386   tctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 440
             ||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 13501 tctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 13447



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                 
Query: 54    gctcattgtggcagacgcagcaaaccacctagagct 89
             |||||||||||||||||||||  |||||||||||||
Sbjct: 13891 gctcattgtggcagacgcagctgaccacctagagct 13856



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 110   aatagcctggccggctgcttcacag 134
             ||||||||||| |||||||||||||
Sbjct: 13782 aatagcctggctggctgcttcacag 13758
to top
>emb|Y07766.2|OSSADMEDC O.sativa mRNA for S-adenosylmethionine decarboxylase
          Length = 2036

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                   
Query: 386  tctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 440
            ||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1560 tctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 1506



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 54   gctcattgtggcagacgcagcaaaccacctagagct 89
            |||||||||||||||||||||  |||||||||||||
Sbjct: 1950 gctcattgtggcagacgcagctgaccacctagagct 1915



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 110  aatagcctggccggctgcttcacag 134
            ||||||||||| |||||||||||||
Sbjct: 1841 aatagcctggctggctgcttcacag 1817
to top
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                       
Query: 386      tctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 440
                ||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 24892916 tctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 24892862



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                    
Query: 54       gctcattgtggcagacgcagcaaaccacctagagct 89
                |||||||||||||||||||||  |||||||||||||
Sbjct: 24893306 gctcattgtggcagacgcagctgaccacctagagct 24893271



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                         
Query: 110      aatagcctggccggctgcttcacag 134
                ||||||||||| |||||||||||||
Sbjct: 24893197 aatagcctggctggctgcttcacag 24893173
to top
>gb|AY966487.1| Oryza sativa (indica cultivar-group) S-adenosylmethionine
            decarboxylase mRNA, complete cds
          Length = 1197

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                   
Query: 386  tctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 440
            ||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1021 tctggtagatgaggaggccgccacagggcagctcctgctctaccatgttgttgca 967
to top
>gb|AF067194.1|AF067194 Oryza sativa S-adenosylmethionine decarboxylase mRNA, complete cds
          Length = 1560

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                   
Query: 386  tctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 440
            ||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1111 tctggtagatgaggaggccgccacagggcagctcctgctctaccatgttgttgca 1057



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 54   gctcattgtggcagacgcagcaaaccacctagagct 89
            |||||||||||||||||||||  |||||||||||||
Sbjct: 1501 gctcattgtggcagacgcagctgaccacctagagct 1466



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 110  aatagcctggccggctgcttcacag 134
            ||||||||||| |||||||||||||
Sbjct: 1392 aatagcctggctggctgcttcacag 1368
to top
>dbj|AK100589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023106D22, full
            insert sequence
          Length = 2063

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                   
Query: 386  tctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 440
            ||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1604 tctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 1550



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 54   gctcattgtggcagacgcagcaaaccacctagagct 89
            |||||||||||||||||||||  |||||||||||||
Sbjct: 1994 gctcattgtggcagacgcagctgaccacctagagct 1959



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 110  aatagcctggccggctgcttcacag 134
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861
to top
>dbj|AK098918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013002M21, full
            insert sequence
          Length = 2059

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                   
Query: 386  tctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 440
            ||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1604 tctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 1550



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 54   gctcattgtggcagacgcagcaaaccacctagagct 89
            |||||||||||||||||||||  |||||||||||||
Sbjct: 1994 gctcattgtggcagacgcagctgaccacctagagct 1959



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 110  aatagcctggccggctgcttcacag 134
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861
to top
>dbj|AK072162.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129L10, full
            insert sequence
          Length = 2711

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                   
Query: 386  tctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 440
            ||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1604 tctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 1550



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 54   gctcattgtggcagacgcagcaaaccacctagagct 89
            |||||||||||||||||||||  |||||||||||||
Sbjct: 1994 gctcattgtggcagacgcagctgaccacctagagct 1959



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 110  aatagcctggccggctgcttcacag 134
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861
to top
>dbj|AK067166.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096P09, full
            insert sequence
          Length = 2063

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                   
Query: 386  tctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 440
            ||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 1604 tctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 1550



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 54   gctcattgtggcagacgcagcaaaccacctagagct 89
            |||||||||||||||||||||  |||||||||||||
Sbjct: 1994 gctcattgtggcagacgcagctgaccacctagagct 1959



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 110  aatagcctggccggctgcttcacag 134
            ||||||||||| |||||||||||||
Sbjct: 1885 aatagcctggctggctgcttcacag 1861
to top
>dbj|AK062001.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-043-D05, full
           insert sequence
          Length = 1217

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                  
Query: 386 tctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 440
           ||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 762 tctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 708



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                
Query: 54   gctcattgtggcagacgcagcaaaccacctagagct 89
            |||||||||||||||||||||  |||||||||||||
Sbjct: 1152 gctcattgtggcagacgcagctgaccacctagagct 1117



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 110  aatagcctggccggctgcttcacag 134
            ||||||||||| |||||||||||||
Sbjct: 1043 aatagcctggctggctgcttcacag 1019
to top
>emb|AL606627.3|OSJN00052 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0067K08,
              complete sequence
          Length = 170765

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                     
Query: 386    tctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 440
              ||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 154632 tctggtagatgaggaggccaccacagggcagctcctgctctaccatgttgttgca 154578



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                  
Query: 54     gctcattgtggcagacgcagcaaaccacctagagct 89
              |||||||||||||||||||||  |||||||||||||
Sbjct: 155022 gctcattgtggcagacgcagctgaccacctagagct 154987



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 110    aatagcctggccggctgcttcacag 134
              ||||||||||| |||||||||||||
Sbjct: 154913 aatagcctggctggctgcttcacag 154889
to top
>emb|AL442115.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0711G06, complete
             sequence
          Length = 148644

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 34/36 (94%)
 Strand = Plus / Minus

                                                 
Query: 54    gctcattgtggcagacgcagcaaaccacctagagct 89
             |||||||||||||||||||||  |||||||||||||
Sbjct: 13919 gctcattgtggcagacgcagctgaccacctagagct 13884



 Score = 54.0 bits (27), Expect = 4e-04
 Identities = 49/55 (89%), Gaps = 1/55 (1%)
 Strand = Plus / Minus

                                                                    
Query: 386   tctggtagatgaggacgcccccgcaggggagctcctgctccacgatgttgttgca 440
             ||||||||||||||| ||| || ||||| ||||||||||| || |||||||||||
Sbjct: 13529 tctggtagatgagga-gccgccacagggcagctcctgctctaccatgttgttgca 13476



 Score = 42.1 bits (21), Expect = 1.7
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 110   aatagcctggccggctgcttcacag 134
             ||||||||||| |||||||||||||
Sbjct: 13810 aatagcctggctggctgcttcacag 13786
to top
>gb|BT018615.1| Zea mays clone EL01N0501D02.d mRNA sequence
          Length = 2057

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 415  agctcctgctccacgatgttgttgcagtc 443
            |||||||||||||| ||||||||||||||
Sbjct: 1538 agctcctgctccaccatgttgttgcagtc 1510



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 301  ctctccacattctcgccctcgaagcagtggaa 332
            |||||||| |||||||| || |||||||||||
Sbjct: 1646 ctctccacgttctcgccgtcaaagcagtggaa 1615
to top
>gb|BT016840.1| Zea mays clone Contig673 mRNA sequence
          Length = 1866

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 415 agctcctgctccacgatgttgttgcagtc 443
           |||||||||||||| ||||||||||||||
Sbjct: 540 agctcctgctccaccatgttgttgcagtc 568



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Plus

                                               
Query: 54  gctcattgtggcagacgcagcaaaccacctagagct 89
           ||||||||||| |||||||||  |||||||||||||
Sbjct: 109 gctcattgtggtagacgcagctgaccacctagagct 144



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                           
Query: 301 ctctccacattctcgccctcgaagcagtggaa 332
           |||||||| |||||||| || |||||||||||
Sbjct: 432 ctctccacgttctcgccgtcaaagcagtggaa 463
to top
>emb|Y07767.1|ZMSADMEDC Z.mays mRNA for S-adenosylmethionine decarboxylase
          Length = 1873

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 415  agctcctgctccacgatgttgttgcagtc 443
            |||||||||||||| ||||||||||||||
Sbjct: 1358 agctcctgctccaccatgttgttgcagtc 1330



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 54   gctcattgtggcagacgcagcaaaccacctagagct 89
            ||||||||||| |||||||||  |||||||||||||
Sbjct: 1789 gctcattgtggtagacgcagctgaccacctagagct 1754



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 301  ctctccacattctcgccctcgaagcagtggaa 332
            |||||||| |||||||| || |||||||||||
Sbjct: 1466 ctctccacgttctcgccgtcaaagcagtggaa 1435
to top
>gb|AY103590.1| Zea mays PCO098412 mRNA sequence
          Length = 2400

 Score = 50.1 bits (25), Expect = 0.007
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                         
Query: 415  agctcctgctccacgatgttgttgcagtc 443
            |||||||||||||| ||||||||||||||
Sbjct: 1607 agctcctgctccaccatgttgttgcagtc 1579



 Score = 48.1 bits (24), Expect = 0.028
 Identities = 33/36 (91%)
 Strand = Plus / Minus

                                                
Query: 54   gctcattgtggcagacgcagcaaaccacctagagct 89
            ||||||||||| |||||||||  |||||||||||||
Sbjct: 2038 gctcattgtggtagacgcagctgaccacctagagct 2003



 Score = 40.1 bits (20), Expect = 6.7
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                            
Query: 301  ctctccacattctcgccctcgaagcagtggaa 332
            |||||||| |||||||| || |||||||||||
Sbjct: 1715 ctctccacgttctcgccgtcaaagcagtggaa 1684
to top
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                           
Query: 62       tggcagacgcagcaaaccacctagagc 88
                ||||||||||||||||||| |||||||
Sbjct: 15331175 tggcagacgcagcaaaccatctagagc 15331201
to top
>dbj|AP005420.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
              clone:P0418B08
          Length = 165909

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                         
Query: 62     tggcagacgcagcaaaccacctagagc 88
              ||||||||||||||||||| |||||||
Sbjct: 110364 tggcagacgcagcaaaccatctagagc 110390
to top
>dbj|AB122089.1| Oryza sativa (japonica cultivar-group) SAMDC1  gene for
            S-adenosylmethionine decarboxylase, complete cds
          Length = 2952

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 62   tggcagacgcagcaaaccacctagagc 88
            ||||||||||||||||||| |||||||
Sbjct: 2817 tggcagacgcagcaaaccatctagagc 2791
to top
>emb|AJ295156.1|PCO295156 Phragmites communis mRNA for d-TDP-glucose dehydratase (tgp gene)
          Length = 1562

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 78/95 (82%), Gaps = 1/95 (1%)
 Strand = Plus / Minus

                                                                       
Query: 381 aaagttctggtagatgaggacgcccccgcaggggagctcctgctccacga-tgttgttgc 439
           |||| ||||||| ||||| |  || |||||||| |||||||||||||| | |||||| ||
Sbjct: 111 aaagctctggtaaatgagaagaccaccgcagggcagctcctgctccacaactgttgtagc 52

                                              
Query: 440 agtcgtatgcctcggcgtcgagcttcttgccccag 474
           |||| ||  ||||||| || || ||||| ||||||
Sbjct: 51  agtcataaacctcggcatcaagtttcttcccccag 17
to top
>dbj|AK102445.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093N21, full
            insert sequence
          Length = 2047

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 62   tggcagacgcagcaaaccacctagagc 88
            ||||||||||||||||||| |||||||
Sbjct: 1917 tggcagacgcagcaaaccatctagagc 1891
to top
>dbj|AK101535.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048C18, full
            insert sequence
          Length = 2002

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 62   tggcagacgcagcaaaccacctagagc 88
            ||||||||||||||||||| |||||||
Sbjct: 1918 tggcagacgcagcaaaccatctagagc 1892
to top
>dbj|AK100397.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023086M03, full
            insert sequence
          Length = 2546

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 62   tggcagacgcagcaaaccacctagagc 88
            ||||||||||||||||||| |||||||
Sbjct: 2443 tggcagacgcagcaaaccatctagagc 2417
to top
>dbj|AK067682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116D10, full
            insert sequence
          Length = 2034

 Score = 46.1 bits (23), Expect = 0.11
 Identities = 26/27 (96%)
 Strand = Plus / Minus

                                       
Query: 62   tggcagacgcagcaaaccacctagagc 88
            ||||||||||||||||||| |||||||
Sbjct: 1917 tggcagacgcagcaaaccatctagagc 1891
to top
>ref|XM_960781.1| Encephalitozoon cuniculi GB-M1 hypothetical protein (ECU01_0400)
           partial mRNA
          Length = 1224

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 424 tccacgatgttgttgcagtcgt 445
           ||||||||||||||||||||||
Sbjct: 88  tccacgatgttgttgcagtcgt 67
to top
>emb|AL391737.2|CNS06C8G chromosome I of strain GB-M1 of Encephalitozoon cuniculi (Microspora)
          Length = 209982

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 424   tccacgatgttgttgcagtcgt 445
             ||||||||||||||||||||||
Sbjct: 55310 tccacgatgttgttgcagtcgt 55331
to top
>gb|AY032614.1| Triticum aestivum receptor-like kinase (Wrlk-S3-9) gene, partial cds
          Length = 2389

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 22   ataagttgtgacagattttctc 43
            ||||||||||||||||||||||
Sbjct: 1265 ataagttgtgacagattttctc 1286
to top
>gb|AF325197.1|AF325197 Triticum aestivum LRK33 (Lrk33) and TAK33 (Tak33) genes, complete cds
          Length = 20754

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 22   ataagttgtgacagattttctc 43
            ||||||||||||||||||||||
Sbjct: 8297 ataagttgtgacagattttctc 8276
to top
>gb|AF325196.1|AF325196 Triticum aestivum PST19 (Pst19), LRR19 (Lrr19), TAK19-1 (Tak19-1), and
             LRK19 (Lrk19) genes, complete cds
          Length = 35872

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 22    ataagttgtgacagattttctc 43
             ||||||||||||||||||||||
Sbjct: 29615 ataagttgtgacagattttctc 29636
to top
>emb|CR847994.10| Zebrafish DNA sequence from clone CH211-203H15 in linkage group 4,
             complete sequence
          Length = 100991

 Score = 44.1 bits (22), Expect = 0.43
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 27    ttgtgacagattttctccaaac 48
             ||||||||||||||||||||||
Sbjct: 68540 ttgtgacagattttctccaaac 68561
to top
>gb|AC125203.3| Mus musculus BAC clone RP23-233M21 from 19, complete sequence
          Length = 191540

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 275   tgccttccttgaccagagggt 295
             |||||||||||||||||||||
Sbjct: 51033 tgccttccttgaccagagggt 51053
to top
>emb|AL591979.1| Listeria monocytogenes strain EGD, complete genome, segment 7/12
          Length = 240050

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 229   tccagagaatcctcctccgcc 249
             |||||||||||||||||||||
Sbjct: 94892 tccagagaatcctcctccgcc 94912
to top
>dbj|AB023064.1| Listeria monocytogenes DNA for DnaK operon, complete cds
          Length = 8881

 Score = 42.1 bits (21), Expect = 1.7
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 229  tccagagaatcctcctccgcc 249
            |||||||||||||||||||||
Sbjct: 4201 tccagagaatcctcctccgcc 4181
to top
>ref|XM_468482.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1497

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 415  agctcctgctccacgatgtt 434
            ||||||||||||||||||||
Sbjct: 1430 agctcctgctccacgatgtt 1411
to top
>emb|AL158077.15| Human DNA sequence from clone RP11-471J7 on chromosome 9 Contains the 5'
              end of the SLC24A2 gene for solute carrier family 24
              (sodium/potassium/calcium exchanger), member 2 (NCKX2) and
              a CpG island, complete sequence
          Length = 159900

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 18     atttataagttgtgacagattttctcca 45
              |||| ||||||||||||| |||||||||
Sbjct: 129003 atttttaagttgtgacagtttttctcca 129030
to top
>emb|BX572593.1| Rhodopseudomonas palustris CGA009 complete genome; segment 1/16
          Length = 349315

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 448    gcctcggcgtcgagcttcttgccc 471
              ||||||||| ||||||||||||||
Sbjct: 194781 gcctcggcggcgagcttcttgccc 194804
to top
>emb|AL939129.1|SCO939129 Streptomyces coelicolor A3(2) complete genome; segment 26/29
          Length = 292200

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 340    ctgggcgacccggcggagac 359
              ||||||||||||||||||||
Sbjct: 276909 ctgggcgacccggcggagac 276890
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 415      agctcctgctccacgatgtt 434
                ||||||||||||||||||||
Sbjct: 35459486 agctcctgctccacgatgtt 35459505
to top
>gb|CP000157.1| Erythrobacter litoralis HTCC2594, complete genome
          Length = 3052398

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 258    gagcaggttggcaagcttgc 277
              ||||||||||||||||||||
Sbjct: 494503 gagcaggttggcaagcttgc 494484
to top
>dbj|AP003989.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1063_D06
          Length = 102439

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 415   agctcctgctccacgatgtt 434
             ||||||||||||||||||||
Sbjct: 71007 agctcctgctccacgatgtt 71026
to top
>emb|AJ698342.1| Megathura crenulata KLH2 gene for hemocyanin 2, exons 1-17
          Length = 24990

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 125   tgcttcacagtaaccaaaac 144
             ||||||||||||||||||||
Sbjct: 19045 tgcttcacagtaaccaaaac 19064
to top
>emb|AL591222.2|HS378I6 Homo sapiens chromosome 9 BAC RP11-378I6, complete sequence
          Length = 147211

 Score = 40.1 bits (20), Expect = 6.7
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 18   atttataagttgtgacagattttctcca 45
            |||| ||||||||||||| |||||||||
Sbjct: 2513 atttttaagttgtgacagtttttctcca 2540


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,778,995
Number of Sequences: 3902068
Number of extensions: 3778995
Number of successful extensions: 94920
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94690
Number of HSP's gapped (non-prelim): 224
length of query: 497
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 475
effective length of database: 17,147,199,772
effective search space: 8144919891700
effective search space used: 8144919891700
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top