ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name rbart41c10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 56 1e-04
2gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 56 1e-04
3emb|AL713927.3|CNS07YP4 Oryza sativa chromosome 12, . BAC OSJNBa... 56 1e-04
4gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 46 0.10
5emb|BX005072.20| Human DNA sequence from clone XXyac-59F3 on chr... 44 0.40
6emb|AL450334.15| Human DNA sequence from clone RP11-556L1 on chr... 44 0.40
7gb|AC013284.9| Homo sapiens chromosome 10 clone RP11-13E1, compl... 44 0.40
8gb|AC026739.7| Homo sapiens chromosome 5 clone CTD-2580L4, compl... 44 0.40
9dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
10dbj|AP003887.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
11dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.40
12gb|AF068845.1|AF068845 Mycobacteriophage TM4, complete genome 44 0.40
13ref|XM_806757.1| Trypanosoma cruzi strain CL Brener hypothetical... 42 1.6
14gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
15gb|AC107314.1| Oryza sativa (japonica cultivar-group) cultivar N... 42 1.6
16dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
17dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
18dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.6
19dbj|AK120810.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.6
20gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 42 1.6
21emb|AL732547.8| Mouse DNA sequence from clone RP23-24E11 on chro... 42 1.6
22dbj|AB028130.1| Oryza sativa mRNA for Dof zinc finger protein, c... 42 1.6
23gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
24gb|AC006044.2| Homo sapiens BAC clone RP11-539B24 from 7, comple... 40 6.3
25gb|AF542968.1| Triticum aestivum myo-inositol 1-phosphate syntha... 40 6.3
26gb|BT009043.1| Triticum aestivum clone wdk5c.pk006.i16:fis, full... 40 6.3
27dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, co... 40 6.3
28dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
29dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
30dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 6.3
31dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
32dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
33dbj|AP004457.2| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
34emb|BX842238.2| Mouse DNA sequence from clone RP24-159M2 on chro... 40 6.3
35dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 40 6.3
36dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic D... 40 6.3
37gb|AC156595.1| Laccaria bicolor clone JGIAHZW-14X, complete sequ... 40 6.3
38emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 6.3
39gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 40 6.3
40gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 40 6.3
41gb|AF056325.1|AF056325 Hordeum vulgare myo-inositol 1-phosphate ... 40 6.3 
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                        
Query: 409      accggcgtcgcgttcatgtcgaacatgtagaggaccatctggatcatcccgaatgt 464
                ||||||||||||||||||| ||||| ||||||  ||||||||| ||  ||||||||
Sbjct: 17343811 accggcgtcgcgttcatgtagaacacgtagagccccatctggaccacaccgaatgt 17343866
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Plus

                                                                        
Query: 409      accggcgtcgcgttcatgtcgaacatgtagaggaccatctggatcatcccgaatgt 464
                ||||||||||||||||||| ||||| ||||||  ||||||||| ||  ||||||||
Sbjct: 17298182 accggcgtcgcgttcatgtagaacacgtagagccccatctggaccacaccgaatgt 17298237
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>emb|AL713927.3|CNS07YP4 Oryza sativa chromosome 12, . BAC OSJNBa0021B03 of library OSJNBa from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 154826

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 409   accggcgtcgcgttcatgtcgaacatgtagaggaccatctggatcatcccgaatgt 464
             ||||||||||||||||||| ||||| ||||||  ||||||||| ||  ||||||||
Sbjct: 59558 accggcgtcgcgttcatgtagaacacgtagagccccatctggaccacaccgaatgt 59503
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 46.1 bits (23), Expect = 0.10
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                              
Query: 326     ccttgccgacgttgatcacgacgacgtggtc 356
               ||||| || ||||||||||||||||||||||
Sbjct: 3505081 ccttgtcggcgttgatcacgacgacgtggtc 3505111
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>emb|BX005072.20| Human DNA sequence from clone XXyac-59F3 on chromosome 10 Contains the
             5' end of a novel gene, a novel gene (MGC35285) and a CpG
             island, complete sequence
          Length = 97407

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 368   ccttccatgcctctttcccctccttg 393
             |||||||| |||||||||||||||||
Sbjct: 44275 ccttccatacctctttcccctccttg 44250
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>emb|AL450334.15| Human DNA sequence from clone RP11-556L1 on chromosome 10 Contains gene
             DKFZP566K0524, the gene for a novel protein similar to
             tyrosine phosphatase (MGC35285), the 3' end of a KIAA0187
             pseudogene, the 3' end of a novel gene, the gene for a
             novel protein similar to ARF GTPase-activating protein
             (MRIP2) and a CpG island, complete sequence
          Length = 171930

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 368   ccttccatgcctctttcccctccttg 393
             |||||||| |||||||||||||||||
Sbjct: 63794 ccttccatacctctttcccctccttg 63769
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>gb|AC013284.9| Homo sapiens chromosome 10 clone RP11-13E1, complete sequence
          Length = 154259

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 368   ccttccatgcctctttcccctccttg 393
             |||||||| |||||||||||||||||
Sbjct: 97949 ccttccatacctctttcccctccttg 97974
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>gb|AC026739.7| Homo sapiens chromosome 5 clone CTD-2580L4, complete sequence
          Length = 186308

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 368   ccttccatgcctctttcccctccttg 393
             |||||||| |||||||||||||||||
Sbjct: 61153 ccttccatacctctttcccctccttg 61128
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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 176      catgagccatgcatggctgcat 197
                ||||||||||||||||||||||
Sbjct: 26003275 catgagccatgcatggctgcat 26003254



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 308      cgcacgagctcttgtcggcc 327
                ||||||||||||||||||||
Sbjct: 23220206 cgcacgagctcttgtcggcc 23220225



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 308     cgcacgagctcttgtcggcc 327
               ||||||||||||||||||||
Sbjct: 1843717 cgcacgagctcttgtcggcc 1843698
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>dbj|AP003887.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1186_G01
          Length = 112077

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 176   catgagccatgcatggctgcat 197
             ||||||||||||||||||||||
Sbjct: 38836 catgagccatgcatggctgcat 38815
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>dbj|AP003865.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
             clone:OJ1081_B12
          Length = 124741

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 176   catgagccatgcatggctgcat 197
             ||||||||||||||||||||||
Sbjct: 88152 catgagccatgcatggctgcat 88131
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>gb|AF068845.1|AF068845 Mycobacteriophage TM4, complete genome
          Length = 52797

 Score = 44.1 bits (22), Expect = 0.40
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 245   gccccggcgccgccgcctcagcagcgcatc 274
             ||||||||||||||||| | ||||||||||
Sbjct: 25212 gccccggcgccgccgccgcggcagcgcatc 25241
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>ref|XM_806757.1| Trypanosoma cruzi strain CL Brener hypothetical protein
           (Tc00.1047053506567.34) partial mRNA
          Length = 1431

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 27  ctattatcaacacgttattgtttat 51
           |||||||||||||||| ||||||||
Sbjct: 812 ctattatcaacacgtttttgtttat 836
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>gb|AC134516.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1208D02,
             complete sequence
          Length = 131922

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 172   catgcatgagccatgcatggc 192
             |||||||||||||||||||||
Sbjct: 34865 catgcatgagccatgcatggc 34885
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>gb|AC107314.1| Oryza sativa (japonica cultivar-group) cultivar Nipponbare clone
             OJ1208D02 from chromosome 10, complete sequence
          Length = 120132

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 172   catgcatgagccatgcatggc 192
             |||||||||||||||||||||
Sbjct: 94997 catgcatgagccatgcatggc 95017
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 172      catgcatgagccatgcatggc 192
                |||||||||||||||||||||
Sbjct: 11226877 catgcatgagccatgcatggc 11226897
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 172      catgcatgagccatgcatggc 192
                |||||||||||||||||||||
Sbjct: 27454660 catgcatgagccatgcatggc 27454680
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>dbj|AP005885.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0657H12
          Length = 142688

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 172   catgcatgagccatgcatggc 192
             |||||||||||||||||||||
Sbjct: 46382 catgcatgagccatgcatggc 46402
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>dbj|AK120810.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014F11, full
            insert sequence
          Length = 1744

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 172  catgcatgagccatgcatggc 192
            |||||||||||||||||||||
Sbjct: 1296 catgcatgagccatgcatggc 1276
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                     
Query: 172      catgcatgagccatgcatggc 192
                |||||||||||||||||||||
Sbjct: 11233317 catgcatgagccatgcatggc 11233337
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>emb|AL732547.8| Mouse DNA sequence from clone RP23-24E11 on chromosome 4, complete
             sequence
          Length = 206741

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 245   gccccggcgccgccgcctcagcagc 269
             |||||| ||||||||||||||||||
Sbjct: 70296 gccccgccgccgccgcctcagcagc 70320
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>dbj|AB028130.1| Oryza sativa mRNA for Dof zinc finger protein, complete cds
          Length = 1550

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 172  catgcatgagccatgcatggc 192
            |||||||||||||||||||||
Sbjct: 1424 catgcatgagccatgcatggc 1404
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>gb|AC131343.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0057E15,
              complete sequence
          Length = 149035

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 172    catgcatgagccatgcatgg 191
              ||||||||||||||||||||
Sbjct: 109795 catgcatgagccatgcatgg 109776
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>gb|AC006044.2| Homo sapiens BAC clone RP11-539B24 from 7, complete sequence
          Length = 141509

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 170   ctcatgcatgagccatgcat 189
             ||||||||||||||||||||
Sbjct: 65253 ctcatgcatgagccatgcat 65234
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>gb|AF542968.1| Triticum aestivum myo-inositol 1-phosphate synthase-like mRNA,
           partial sequence
          Length = 819

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 337 ttgatcacgacgacgtggtc 356
           ||||||||||||||||||||
Sbjct: 377 ttgatcacgacgacgtggtc 358
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>gb|BT009043.1| Triticum aestivum clone wdk5c.pk006.i16:fis, full insert mRNA
           sequence
          Length = 790

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 337 ttgatcacgacgacgtggtc 356
           ||||||||||||||||||||
Sbjct: 54  ttgatcacgacgacgtggtc 35
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>dbj|AP008230.1| Desulfitobacterium hafniense Y51 genomic DNA, complete genome
          Length = 5727534

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 73      gatataacagaacaaaggca 92
               ||||||||||||||||||||
Sbjct: 5016933 gatataacagaacaaaggca 5016914
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>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 172      catgcatgagccatgcatgg 191
                ||||||||||||||||||||
Sbjct: 16469196 catgcatgagccatgcatgg 16469177
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 172     catgcatgagccatgcatgg 191
               ||||||||||||||||||||
Sbjct: 2370834 catgcatgagccatgcatgg 2370853
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 395     catcgcttgccacgaccggc 414
               ||||||||||||||||||||
Sbjct: 5293339 catcgcttgccacgaccggc 5293358
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>dbj|AP005250.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC
              clone:OSJNBb0009H02
          Length = 155388

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 308    cgcacgagctcttgtcggcc 327
              ||||||||||||||||||||
Sbjct: 126078 cgcacgagctcttgtcggcc 126059
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>dbj|AP004693.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0461F06
          Length = 147891

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 308    cgcacgagctcttgtcggcc 327
              ||||||||||||||||||||
Sbjct: 143305 cgcacgagctcttgtcggcc 143324
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>dbj|AP004457.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0013B04
          Length = 141319

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   cgcacgagctcttgtcggcc 327
             ||||||||||||||||||||
Sbjct: 19557 cgcacgagctcttgtcggcc 19576
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>emb|BX842238.2| Mouse DNA sequence from clone RP24-159M2 on chromosome 2, complete
             sequence
          Length = 86221

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 373   catgcctctttcccctcctt 392
             ||||||||||||||||||||
Sbjct: 77280 catgcctctttcccctcctt 77261
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 287     cggcgaccgggcgcacctcggcgc 310
               |||||||| |||||||||||||||
Sbjct: 3350100 cggcgaccaggcgcacctcggcgc 3350123
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>dbj|AP005473.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBa0077B15
          Length = 139345

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 172   catgcatgagccatgcatgg 191
             ||||||||||||||||||||
Sbjct: 73842 catgcatgagccatgcatgg 73861
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>gb|AC156595.1| Laccaria bicolor clone JGIAHZW-14X, complete sequence
          Length = 31069

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 193   tgcatctagaccacctcaac 212
             ||||||||||||||||||||
Sbjct: 23241 tgcatctagaccacctcaac 23222
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>emb|AL442110.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0512B01, complete
             sequence
          Length = 140069

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 308   cgcacgagctcttgtcggcc 327
             ||||||||||||||||||||
Sbjct: 97072 cgcacgagctcttgtcggcc 97053



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 308   cgcacgagctcttgtcggcc 327
             ||||||||||||||||||||
Sbjct: 40532 cgcacgagctcttgtcggcc 40513
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 314     agctcttgtcggccttgccg 333
               ||||||||||||||||||||
Sbjct: 2085171 agctcttgtcggccttgccg 2085152
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>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 172      catgcatgagccatgcatgg 191
                ||||||||||||||||||||
Sbjct: 16560200 catgcatgagccatgcatgg 16560181
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>gb|AF056325.1|AF056325 Hordeum vulgare myo-inositol 1-phosphate synthase mRNA, complete cds
          Length = 2152

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 337  ttgatcacgacgacgtggtc 356
            ||||||||||||||||||||
Sbjct: 1302 ttgatcacgacgacgtggtc 1283


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,329,356
Number of Sequences: 3902068
Number of extensions: 3329356
Number of successful extensions: 65251
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64410
Number of HSP's gapped (non-prelim): 841
length of query: 464
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 442
effective length of database: 17,147,199,772
effective search space: 7579062299224
effective search space used: 7579062299224
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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